Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:47:04 (2782878): wrapper (7.7.26015): starting
06:47:04 (2782878): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 06:47:04] Arguments: --nthreads 12
[2026-01-16 06:47:04] Threads: 12
[2026-01-16 06:47:04] Checking for CVMFS
[2026-01-16 06:47:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 06:47:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 06:47:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 06:47:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 06:47:05] 2.13.3.0 40677 10135 64976 155198 2 236 3980275 4096001 19142 130560 0 79845354 99.980 1141009 231 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 06:47:05] CVMFS is ok
[2026-01-16 06:47:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 06:47:05] Checking for apptainer binary...
[2026-01-16 06:47:05] apptainer is not installed, using version from CVMFS
[2026-01-16 06:47:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 06:47:07] epyc7v12
[2026-01-16 06:47:07] apptainer works
[2026-01-16 06:47:07] Set ATHENA_PROC_NUMBER=12
[2026-01-16 06:47:07] Set ATHENA_CORE_NUMBER=12
[2026-01-16 06:47:07] Starting ATLAS job with PandaID=6969630347
[2026-01-16 06:47:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 08:20:53]  *** The last 200 lines of the pilot log: ***
[2026-01-16 08:20:53] 2026-01-16 08:19:45,571 | INFO     | transferring file log.48215263._033095.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31427/slots/1/PanDA_Pilot-6969630347/log.48215263._033095.job.log.tgz.1 t
[2026-01-16 08:20:53] 2026-01-16 08:19:45,572 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31427/slots/1/PanDA_Pilot-6969630347/log.48215263._033095.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-16 08:20:53] 2026-01-16 08:19:45,620 | INFO     | adding to output.list: log.48215263._033095.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/b6/log.48215263._033095.job.log.tg
[2026-01-16 08:20:53] 2026-01-16 08:19:45,623 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-16 08:20:53] 2026-01-16 08:19:45,623 | INFO     | summary of transferred files:
[2026-01-16 08:20:53] 2026-01-16 08:19:45,623 | INFO     |  -- lfn=log.48215263._033095.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 08:20:53] 2026-01-16 08:19:45,624 | INFO     | stage-out finished correctly
[2026-01-16 08:20:53] 2026-01-16 08:19:47,030 | INFO     | time since job start (5529s) is within the limit (349056.0s)
[2026-01-16 08:20:53] 2026-01-16 08:19:47,134 | INFO     | monitor loop #363: job 0:6969630347 is in state 'finished'
[2026-01-16 08:20:53] 2026-01-16 08:19:47,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 08:20:53] 2026-01-16 08:19:47,708 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 08:20:53] 2026-01-16 08:19:47,867 | INFO     | job 6969630347 has state=finished
[2026-01-16 08:20:53] 2026-01-16 08:19:47,867 | INFO     | preparing for final server update for job 6969630347 in state='finished'
[2026-01-16 08:20:53] 2026-01-16 08:19:47,868 | INFO     | this job has now completed (state=finished)
[2026-01-16 08:20:53] 2026-01-16 08:19:47,868 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 08:20:53] 2026-01-16 08:19:47,868 | INFO     | log transfer has been attempted: DONE
[2026-01-16 08:20:53] 2026-01-16 08:19:47,868 | INFO     | job 6969630347 has finished - writing final server update
[2026-01-16 08:20:53] 2026-01-16 08:19:47,869 | INFO     | total number of processed events: 400 (read)
[2026-01-16 08:20:53] 2026-01-16 08:19:47,869 | INFO     | executing command: lscpu
[2026-01-16 08:20:53] 2026-01-16 08:19:48,033 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 08:20:53] 2026-01-16 08:19:49,050 | INFO     | time since job start (5531s) is within the limit (349056.0s)
[2026-01-16 08:20:53] 2026-01-16 08:19:49,643 | INFO     | monitor loop #364: job 0:6969630347 is in state 'finished'
[2026-01-16 08:20:53] 2026-01-16 08:19:49,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 08:20:53] 2026-01-16 08:19:51,057 | INFO     | time since job start (5533s) is within the limit (349056.0s)
[2026-01-16 08:20:53] 2026-01-16 08:19:52,146 | INFO     | monitor loop #365: job 0:6969630347 is in state 'finished'
[2026-01-16 08:20:53] 2026-01-16 08:19:52,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 08:20:53] 2026-01-16 08:19:53,065 | INFO     | time since job start (5535s) is within the limit (349056.0s)
[2026-01-16 08:20:53] 2026-01-16 08:19:54,649 | INFO     | monitor loop #366: job 0:6969630347 is in state 'finished'
[2026-01-16 08:20:53] 2026-01-16 08:19:54,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 08:20:53] 2026-01-16 08:19:55,070 | INFO     | time since job start (5537s) is within the limit (349056.0s)
[2026-01-16 08:20:53] 2026-01-16 08:19:55,071 | INFO     | 5540s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-16 08:20:53] 2026-01-16 08:19:57,077 | INFO     | time since job start (5539s) is within the limit (349056.0s)
[2026-01-16 08:20:53] 2026-01-16 08:19:57,152 | INFO     | monitor loop #367: job 0:6969630347 is in state 'finished'
[2026-01-16 08:20:53] 2026-01-16 08:19:57,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 08:20:53] 2026-01-16 08:19:59,082 | INFO     | time since job start (5541s) is within the limit (349056.0s)
[2026-01-16 08:20:53] 2026-01-16 08:19:59,657 | INFO     | monitor loop #368: job 0:6969630347 is in state 'finished'
[2026-01-16 08:20:53] 2026-01-16 08:19:59,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 08:20:53] 2026-01-16 08:20:01,044 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 08:20:53] 2026-01-16 08:20:01,087 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2405.6914453125
[2026-01-16 08:20:53] 2026-01-16 08:20:01,087 | INFO     | time since job start (5543s) is within the limit (349056.0s)
[2026-01-16 08:20:53] 2026-01-16 08:20:01,115 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/1/PanDA_Pilot-6969630347/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 08:20:53] 2026-01-16 08:20:01,116 | INFO     | extracted standard info from prmon json
[2026-01-16 08:20:53] 2026-01-16 08:20:01,116 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 08:20:53] 2026-01-16 08:20:01,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 08:20:53] 2026-01-16 08:20:01,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 08:20:53] 2026-01-16 08:20:01,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 08:20:53] 2026-01-16 08:20:01,119 | INFO     | fitting pss+swap vs Time
[2026-01-16 08:20:53] 2026-01-16 08:20:01,119 | INFO     | sum of square deviations: 177275882.0
[2026-01-16 08:20:53] 2026-01-16 08:20:01,119 | INFO     | sum of deviations: 6418657290.000001
[2026-01-16 08:20:53] 2026-01-16 08:20:01,120 | INFO     | mean x: 1768548933.0
[2026-01-16 08:20:53] 2026-01-16 08:20:01,120 | INFO     | mean y: 2680409.879518072
[2026-01-16 08:20:53] 2026-01-16 08:20:01,120 | INFO     | intersect: -64031464412.6078
[2026-01-16 08:20:53] 2026-01-16 08:20:01,120 | INFO     | chi2: 0.18888163510934186
[2026-01-16 08:20:53] 2026-01-16 08:20:01,120 | INFO     | current memory leak: 36.21 B/s (using 83 data points, chi2=0.19)
[2026-01-16 08:20:53] 2026-01-16 08:20:01,120 | INFO     | could have reported an average CPU frequency of 2402 MHz (7 samples)
[2026-01-16 08:20:53] 2026-01-16 08:20:01,121 | INFO     | ..............................
[2026-01-16 08:20:53] 2026-01-16 08:20:01,121 | INFO     | . Timing measurements:
[2026-01-16 08:20:53] 2026-01-16 08:20:01,121 | INFO     | . get job = 0 s
[2026-01-16 08:20:53] 2026-01-16 08:20:01,121 | INFO     | . initial setup = 3 s
[2026-01-16 08:20:53] 2026-01-16 08:20:01,121 | INFO     | . payload setup = 17 s
[2026-01-16 08:20:53] 2026-01-16 08:20:01,121 | INFO     | . stage-in = 0 s
[2026-01-16 08:20:53] 2026-01-16 08:20:01,121 | INFO     | . payload execution = 5467 s
[2026-01-16 08:20:53] 2026-01-16 08:20:01,121 | INFO     | . stage-out = 1 s
[2026-01-16 08:20:53] 2026-01-16 08:20:01,121 | INFO     | . log creation = 0 s
[2026-01-16 08:20:53] 2026-01-16 08:20:01,122 | INFO     | ..............................
[2026-01-16 08:20:53] 2026-01-16 08:20:01,321 | INFO     | 
[2026-01-16 08:20:53] 2026-01-16 08:20:01,321 | INFO     | job summary report
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | --------------------------------------------------
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | PanDA job id: 6969630347
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | task id: 48215263
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | errors: (none)
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | pilot state: finished 
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | transexitcode: 0
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | exeerrorcode: 0
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | exeerrordiag: 
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | exitcode: 0
[2026-01-16 08:20:53] 2026-01-16 08:20:01,322 | INFO     | exitmsg: OK
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | cpuconsumptiontime: 29901 s
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | nevents: 400
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | neventsw: 0
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | pid: 2800275
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | pgrp: 2800275
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | corecount: 12
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | event service: False
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | sizes: {0: 2283747, 1: 2284002, 2: 2284030, 13: 2284030, 15: 2284348, 23: 2284376, 5488: 2311147, 5490: 2320191, 5492: 2320247, 5506: 2320441}
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | --------------------------------------------------
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | 
[2026-01-16 08:20:53] 2026-01-16 08:20:01,323 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/1
[2026-01-16 08:20:53] 2026-01-16 08:20:01,386 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,387 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,387 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,387 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,390 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 08:20:53] 2026-01-16 08:20:01,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,391 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 08:20:53] 2026-01-16 08:20:01,391 | INFO     | job 6969630347 has completed (purged errors)
[2026-01-16 08:20:53] 2026-01-16 08:20:01,391 | INFO     | overall cleanup function is called
[2026-01-16 08:20:53] 2026-01-16 08:20:02,407 | INFO     | --- collectZombieJob: --- 10, [2800275]
[2026-01-16 08:20:53] 2026-01-16 08:20:02,407 | INFO     | zombie collector waiting for pid 2800275
[2026-01-16 08:20:53] 2026-01-16 08:20:02,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 08:20:53] 2026-01-16 08:20:02,407 | INFO     | collected zombie processes
[2026-01-16 08:20:53] 2026-01-16 08:20:02,408 | INFO     | will attempt to kill all subprocesses of pid=2800275
[2026-01-16 08:20:53] 2026-01-16 08:20:03,855 | INFO     | process IDs to be killed: [2800275] (in reverse order)
[2026-01-16 08:20:53] 2026-01-16 08:20:04,387 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 08:20:53] 2026-01-16 08:20:04,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 08:20:53] 2026-01-16 08:20:04,430 | INFO     | did not find any defunct processes belonging to 2800275
[2026-01-16 08:20:53] 2026-01-16 08:20:04,478 | INFO     | did not find any defunct processes belonging to 2800275
[2026-01-16 08:20:53] 2026-01-16 08:20:04,479 | INFO     | ready for new job
[2026-01-16 08:20:53] 2026-01-16 08:20:04,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 08:20:53] 2026-01-16 08:20:04,481 | INFO     | ***************************************
[2026-01-16 08:20:53] 2026-01-16 08:20:04,481 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 08:20:53] 2026-01-16 08:20:04,481 | INFO     | ***************************************
[2026-01-16 08:20:53] 2026-01-16 08:20:04,481 | INFO     | 
[2026-01-16 08:20:53] 2026-01-16 08:20:04,499 | INFO     | architecture information:
[2026-01-16 08:20:53] 2026-01-16 08:20:04,504 | INFO     | executing command: cat /etc/os-release
[2026-01-16 08:20:53] 2026-01-16 08:20:04,545 | INFO     | cat /etc/os-release:
[2026-01-16 08:20:53] NAME="CentOS Linux"
[2026-01-16 08:20:53] VERSION="7 (Core)"
[2026-01-16 08:20:53] ID="centos"
[2026-01-16 08:20:53] ID_LIKE="rhel fedora"
[2026-01-16 08:20:53] VERSION_ID="7"
[2026-01-16 08:20:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 08:20:53] ANSI_COLOR="0;31"
[2026-01-16 08:20:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 08:20:53] HOME_URL="https://www.centos.org/"
[2026-01-16 08:20:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 08:20:53] 
[2026-01-16 08:20:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 08:20:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 08:20:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 08:20:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 08:20:53] 
[2026-01-16 08:20:53] 2026-01-16 08:20:04,546 | INFO     | ***************************************
[2026-01-16 08:20:53] 2026-01-16 08:20:05,048 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/1
[2026-01-16 08:20:53] 2026-01-16 08:20:05,090 | INFO     | sufficient remaining disk space (259937796096 B)
[2026-01-16 08:20:53] 2026-01-16 08:20:05,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 08:20:53] 2026-01-16 08:20:05,093 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 08:20:53] 2026-01-16 08:20:05,093 | INFO     | update_server=False
[2026-01-16 08:20:53] 2026-01-16 08:20:05,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 08:20:53] 2026-01-16 08:20:05,368 | INFO     | all data control threads have been joined
[2026-01-16 08:20:53] 2026-01-16 08:20:05,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 08:20:53] 2026-01-16 08:20:05,672 | INFO     | aborting loop
[2026-01-16 08:20:53] 2026-01-16 08:20:05,908 | INFO     | all job control threads have been joined
[2026-01-16 08:20:53] 2026-01-16 08:20:06,099 | INFO     | [job] retrieve thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:06,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 08:20:53] 2026-01-16 08:20:06,295 | INFO     | [data] copytool_in thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:06,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 08:20:53] 2026-01-16 08:20:06,373 | INFO     | [data] control thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:06,462 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:06,498 | INFO     | all payload control threads have been joined
[2026-01-16 08:20:53] 2026-01-16 08:20:06,677 | INFO     | [job] job monitor thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:06,733 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:06,762 | INFO     | [job] validate thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:06,811 | INFO     | [payload] validate_post thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:06,913 | INFO     | [job] control thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:07,212 | INFO     | [payload] failed_post thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:07,242 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:07,343 | INFO     | [job] queue monitor thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:07,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 08:20:53] 2026-01-16 08:20:07,470 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:07,504 | INFO     | [payload] control thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:08,285 | INFO     | [data] copytool_out thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:11,399 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 08:20:53] 2026-01-16 08:20:35,980 | INFO     | PID=2790615 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 08:20:53] 2026-01-16 08:20:35,981 | INFO     | .. there are 22 such processes running
[2026-01-16 08:20:53] 2026-01-16 08:20:35,982 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 08:20:53] 2026-01-16 08:20:35,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 08:20:53] 2026-01-16 08:20:35,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 08:20:53] 2026-01-16 08:20:47,074 | INFO     | [monitor] cgroup control has ended
[2026-01-16 08:20:53] 2026-01-16 08:20:47,950 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137095639680832)>', '<ExcThread(monitor, started 137095020541696)>']
[2026-01-16 08:20:53] 2026-01-16 08:20:48,052 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 08:20:53] 2026-01-16 08:20:48,052 | INFO     | [monitor] control thread has ended
[2026-01-16 08:20:53] 2026-01-16 08:20:52,975 | INFO     | all workflow threads have been joined
[2026-01-16 08:20:53] 2026-01-16 08:20:52,975 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 08:20:53] 2026-01-16 08:20:52,976 | INFO     | traces error code: 0
[2026-01-16 08:20:53] 2026-01-16 08:20:52,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 08:20:53] 2026-01-16 08:20:53,314 [wrapper] ==== pilot stdout END ====
[2026-01-16 08:20:53] 2026-01-16 08:20:53,322 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 08:20:53] 2026-01-16 08:20:53,332 [wrapper] pilotpid: 2790615
[2026-01-16 08:20:53] 2026-01-16 08:20:53,341 [wrapper] Pilot exit status: 0
[2026-01-16 08:20:53] 2026-01-16 08:20:53,381 [wrapper] pandaids: 6969630347
[2026-01-16 08:20:53] 2026-01-16 08:20:53,592 [wrapper] cleanup supervisor_pilot 3239194 2790616
[2026-01-16 08:20:53] 2026-01-16 08:20:53,612 [wrapper] Test setup, not cleaning
[2026-01-16 08:20:53] 2026-01-16 08:20:53,621 [wrapper] apfmon messages muted
[2026-01-16 08:20:53] 2026-01-16 08:20:53,633 [wrapper] ==== wrapper stdout END ====
[2026-01-16 08:20:53] 2026-01-16 08:20:53,644 [wrapper] ==== wrapper stderr END ====
[2026-01-16 08:20:53]  *** Error codes and diagnostics ***
[2026-01-16 08:20:53]     "exeErrorCode": 0,
[2026-01-16 08:20:53]     "exeErrorDiag": "",
[2026-01-16 08:20:53]     "pilotErrorCode": 0,
[2026-01-16 08:20:53]     "pilotErrorDiag": "",
[2026-01-16 08:20:53]  *** Listing of results directory ***
[2026-01-16 08:20:53] total 736724
[2026-01-16 08:20:53] -rw-r--r-- 1 boinc boinc    579449 Jan 14 18:53 pilot3.tar.gz
[2026-01-16 08:20:53] -rwx------ 1 boinc boinc     36322 Jan 14 18:57 runpilot2-wrapper.sh
[2026-01-16 08:20:53] -rw-r--r-- 1 boinc boinc      5112 Jan 14 19:01 queuedata.json
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc       100 Jan 16 06:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 08:20:53] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 06:47 run_atlas
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc       105 Jan 16 06:47 job.xml
[2026-01-16 08:20:53] -rw-r--r-- 2 boinc boinc 596590205 Jan 16 06:47 EVNT.32794306._001323.pool.root.1
[2026-01-16 08:20:53] -rw-r--r-- 2 boinc boinc     15847 Jan 16 06:47 start_atlas.sh
[2026-01-16 08:20:53] drwxrwx--x 2 boinc boinc      4096 Jan 16 06:47 shared
[2026-01-16 08:20:53] -rw-r--r-- 2 boinc boinc    592405 Jan 16 06:47 input.tar.gz
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc         0 Jan 16 06:47 boinc_setup_complete
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 06:47 init_data.xml
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc         0 Jan 16 06:47 boinc_lockfile
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc      2508 Jan 16 06:47 pandaJob.out
[2026-01-16 08:20:53] -rw------- 1 boinc boinc   1004075 Jan 16 06:47 agis_schedconf.cvmfs.json
[2026-01-16 08:20:53] -rw------- 1 boinc boinc   1516246 Jan 16 06:47 agis_ddmendpoints.agis.ALL.json
[2026-01-16 08:20:53] drwx------ 5 boinc boinc      4096 Jan 16 06:47 pilot3
[2026-01-16 08:20:53] -rw------- 1 boinc boinc 151530032 Jan 16 08:18 HITS.48215263._033095.pool.root.1
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc       530 Jan 16 08:19 boinc_task_state.xml
[2026-01-16 08:20:53] -rw------- 1 boinc boinc      1024 Jan 16 08:19 memory_monitor_summary.json
[2026-01-16 08:20:53] -rw------- 1 boinc boinc    402049 Jan 16 08:19 log.48215263._033095.job.log.tgz.1
[2026-01-16 08:20:53] -rw------- 1 boinc boinc      7733 Jan 16 08:20 heartbeat.json
[2026-01-16 08:20:53] -rw------- 1 boinc boinc        95 Jan 16 08:20 pilot_heartbeat.json
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 08:20 boinc_mmap_file
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc        27 Jan 16 08:20 wrapper_checkpoint.txt
[2026-01-16 08:20:53] -rw------- 1 boinc boinc      4848 Jan 16 08:20 pilotlog.txt
[2026-01-16 08:20:53] -rw------- 1 boinc boinc    773762 Jan 16 08:20 log.48215263._033095.job.log.1
[2026-01-16 08:20:53] -rw------- 1 boinc boinc       357 Jan 16 08:20 output.list
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc       620 Jan 16 08:20 runtime_log
[2026-01-16 08:20:53] -rw------- 1 boinc boinc   1198080 Jan 16 08:20 result.tar.gz
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 08:20 runtime_log.err
[2026-01-16 08:20:53] -rw------- 1 boinc boinc       651 Jan 16 08:20 ol1KDmmEL08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRMmKDmgHGUxm.diag
[2026-01-16 08:20:53] -rw-rw-r-- 1 boinc boinc     22393 Jan 16 08:20 stderr.txt
[2026-01-16 08:20:53] HITS file was successfully produced:
[2026-01-16 08:20:53] -rw------- 1 boinc boinc 151530032 Jan 16 08:18 shared/HITS.pool.root.1
[2026-01-16 08:20:53]  *** Contents of shared directory: ***
[2026-01-16 08:20:53] total 732364
[2026-01-16 08:20:53] -rw-r--r-- 2 boinc boinc 596590205 Jan 16 06:47 ATLAS.root_0
[2026-01-16 08:20:53] -rw-r--r-- 2 boinc boinc     15847 Jan 16 06:47 start_atlas.sh
[2026-01-16 08:20:53] -rw-r--r-- 2 boinc boinc    592405 Jan 16 06:47 input.tar.gz
[2026-01-16 08:20:53] -rw------- 1 boinc boinc 151530032 Jan 16 08:18 HITS.pool.root.1
[2026-01-16 08:20:53] -rw------- 1 boinc boinc   1198080 Jan 16 08:20 result.tar.gz
08:20:55 (2782878): run_atlas exited; CPU time 30214.174344
08:20:55 (2782878): called boinc_finish(0)

</stderr_txt>
]]>

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