Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:01:41 (14583): wrapper (7.7.26015): starting
08:01:41 (14583): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 08:01:41] Arguments: --nthreads 8
[2026-01-15 08:01:41] Threads: 8
[2026-01-15 08:01:41] Checking for CVMFS
[2026-01-15 08:01:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 08:01:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 08:01:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 08:01:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 08:01:42] 2.11.0.0 8372 137334 78152 155158 2 187 4007271 4096001 873 130560 5 6246163 99.534 6538027 430 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-15 08:01:42] CVMFS is ok
[2026-01-15 08:01:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 08:01:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 08:01:42] Further information can be found at the LHC@home message board.
[2026-01-15 08:01:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 08:01:42] Checking for apptainer binary...
[2026-01-15 08:01:42] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-15 08:01:42] apptainer is not installed, using version from CVMFS
[2026-01-15 08:01:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 08:01:42] WARNING: Environment variable TMPDIR already has value [/tmp/job_11019392/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node187
[2026-01-15 08:01:42] apptainer works
[2026-01-15 08:01:42] Set ATHENA_PROC_NUMBER=8
[2026-01-15 08:01:42] Set ATHENA_CORE_NUMBER=8
[2026-01-15 08:01:42] Starting ATLAS job with PandaID=6969261409
[2026-01-15 08:01:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11019392/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 08:34:19]  *** The last 200 lines of the pilot log: ***
[2026-01-15 08:34:19]  lfn=log.48215263._002678.job.log.tgz.1
[2026-01-15 08:34:19]  mtime=0
[2026-01-15 08:34:19]  protocol_id=None
[2026-01-15 08:34:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 08:34:19]  replicas=None
[2026-01-15 08:34:19]  scope=mc23_13p6TeV
[2026-01-15 08:34:19]  status=None
[2026-01-15 08:34:19]  status_code=0
[2026-01-15 08:34:19]  storage_token=
[2026-01-15 08:34:19]  surl=/tmp/job_11019392/atlas/pilot/slots/0/PanDA_Pilot-6969261409/log.48215263._002678.job.log.tgz.1
[2026-01-15 08:34:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/f9/log.48215263._002678.job.log.tgz.1
[2026-01-15 08:34:19]  workdir=None
[2026-01-15 08:34:19] ]
[2026-01-15 08:34:19] 2026-01-15 07:33:42,115 | INFO     | transferring file log.48215263._002678.job.log.tgz.1 from /tmp/job_11019392/atlas/pilot/slots/0/PanDA_Pilot-6969261409/log.48215263._002678.job.log.tgz.1 to /tmp/j
[2026-01-15 08:34:19] 2026-01-15 07:33:42,115 | INFO     | executing command: /usr/bin/env mv /tmp/job_11019392/atlas/pilot/slots/0/PanDA_Pilot-6969261409/log.48215263._002678.job.log.tgz.1 /tmp/job_11019392/atlas/pilot/sl
[2026-01-15 08:34:19] 2026-01-15 07:33:42,124 | INFO     | adding to output.list: log.48215263._002678.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/f9/log.48215263._002678.job.log.tg
[2026-01-15 08:34:19] 2026-01-15 07:33:42,124 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 08:34:19] 2026-01-15 07:33:42,124 | INFO     | summary of transferred files:
[2026-01-15 08:34:19] 2026-01-15 07:33:42,124 | INFO     |  -- lfn=log.48215263._002678.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 08:34:19] 2026-01-15 07:33:42,124 | INFO     | stage-out finished correctly
[2026-01-15 08:34:19] 2026-01-15 07:33:42,712 | INFO     | PID=19581 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 08:34:19] 2026-01-15 07:33:43,712 | INFO     | time since job start (1917s) is within the limit (349056.0s)
[2026-01-15 08:34:19] 2026-01-15 07:33:44,055 | INFO     | monitor loop #145: job 0:6969261409 is in state 'finished'
[2026-01-15 08:34:19] 2026-01-15 07:33:44,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:34:19] 2026-01-15 07:33:44,445 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 08:34:19] 2026-01-15 07:33:45,455 | INFO     | job 6969261409 has state=finished
[2026-01-15 08:34:19] 2026-01-15 07:33:45,455 | INFO     | preparing for final server update for job 6969261409 in state='finished'
[2026-01-15 08:34:19] 2026-01-15 07:33:45,455 | INFO     | this job has now completed (state=finished)
[2026-01-15 08:34:19] 2026-01-15 07:33:45,455 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 08:34:19] 2026-01-15 07:33:45,455 | INFO     | log transfer has been attempted: DONE
[2026-01-15 08:34:19] 2026-01-15 07:33:45,455 | INFO     | job 6969261409 has finished - writing final server update
[2026-01-15 08:34:19] 2026-01-15 07:33:45,456 | INFO     | total number of processed events: 400 (read)
[2026-01-15 08:34:19] 2026-01-15 07:33:45,456 | INFO     | executing command: lscpu
[2026-01-15 08:34:19] 2026-01-15 07:33:45,487 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 08:34:19] 2026-01-15 07:33:45,717 | INFO     | time since job start (1919s) is within the limit (349056.0s)
[2026-01-15 08:34:19] 2026-01-15 07:33:46,558 | INFO     | monitor loop #146: job 0:6969261409 is in state 'finished'
[2026-01-15 08:34:19] 2026-01-15 07:33:46,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:34:19] 2026-01-15 07:33:47,039 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 08:34:19] 2026-01-15 07:33:47,044 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2365.235765625
[2026-01-15 08:34:19] 2026-01-15 07:33:47,049 | INFO     | using path: /tmp/job_11019392/atlas/pilot/slots/0/PanDA_Pilot-6969261409/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 08:34:19] 2026-01-15 07:33:47,049 | INFO     | extracted standard info from prmon json
[2026-01-15 08:34:19] 2026-01-15 07:33:47,049 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 08:34:19] 2026-01-15 07:33:47,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 08:34:19] 2026-01-15 07:33:47,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 08:34:19] 2026-01-15 07:33:47,049 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | fitting pss+swap vs Time
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | sum of square deviations: 4837300.0
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | sum of deviations: -326288390.0
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | mean x: 1768461561.0
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | mean y: 2611156.56
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | intersect: 119289915131.00374
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | chi2: 0.0031186257404845603
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | current memory leak: -67.45 B/s (using 25 data points, chi2=0.00)
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | could have reported an average CPU frequency of 2402 MHz (5 samples)
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | ..............................
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | . Timing measurements:
[2026-01-15 08:34:19] 2026-01-15 07:33:47,050 | INFO     | . get job = 0 s
[2026-01-15 08:34:19] 2026-01-15 07:33:47,051 | INFO     | . initial setup = 1 s
[2026-01-15 08:34:19] 2026-01-15 07:33:47,051 | INFO     | . payload setup = 2 s
[2026-01-15 08:34:19] 2026-01-15 07:33:47,051 | INFO     | . stage-in = 0 s
[2026-01-15 08:34:19] 2026-01-15 07:33:47,051 | INFO     | . payload execution = 1896 s
[2026-01-15 08:34:19] 2026-01-15 07:33:47,051 | INFO     | . stage-out = 0 s
[2026-01-15 08:34:19] 2026-01-15 07:33:47,051 | INFO     | . log creation = 0 s
[2026-01-15 08:34:19] 2026-01-15 07:33:47,051 | INFO     | ..............................
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | 
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | job summary report
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | --------------------------------------------------
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | PanDA job id: 6969261409
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | task id: 48215263
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | errors: (none)
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | pilot state: finished 
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | transexitcode: 0
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | exeerrorcode: 0
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | exeerrordiag: 
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | exitcode: 0
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | exitmsg: OK
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | cpuconsumptiontime: 13642 s
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | nevents: 400
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | neventsw: 0
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | pid: 27925
[2026-01-15 08:34:19] 2026-01-15 07:33:47,099 | INFO     | pgrp: 27925
[2026-01-15 08:34:19] 2026-01-15 07:33:47,100 | INFO     | corecount: 8
[2026-01-15 08:34:19] 2026-01-15 07:33:47,100 | INFO     | event service: False
[2026-01-15 08:34:19] 2026-01-15 07:33:47,100 | INFO     | sizes: {0: 2283786, 1: 2284096, 2: 2284358, 11: 2284386, 1902: 2309384, 1903: 2318412, 1905: 2318596, 1908: 2318822}
[2026-01-15 08:34:19] 2026-01-15 07:33:47,100 | INFO     | --------------------------------------------------
[2026-01-15 08:34:19] 2026-01-15 07:33:47,100 | INFO     | 
[2026-01-15 08:34:19] 2026-01-15 07:33:47,100 | INFO     | executing command: ls -lF /tmp/job_11019392/atlas/pilot/slots/0
[2026-01-15 08:34:19] 2026-01-15 07:33:47,109 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,109 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,109 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,109 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | job 6969261409 has completed (purged errors)
[2026-01-15 08:34:19] 2026-01-15 07:33:47,110 | INFO     | overall cleanup function is called
[2026-01-15 08:34:19] 2026-01-15 07:33:48,116 | INFO     | --- collectZombieJob: --- 10, [27925]
[2026-01-15 08:34:19] 2026-01-15 07:33:48,116 | INFO     | zombie collector waiting for pid 27925
[2026-01-15 08:34:19] 2026-01-15 07:33:48,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 08:34:19] 2026-01-15 07:33:48,116 | INFO     | collected zombie processes
[2026-01-15 08:34:19] 2026-01-15 07:33:48,116 | INFO     | will attempt to kill all subprocesses of pid=27925
[2026-01-15 08:34:19] 2026-01-15 07:33:48,203 | INFO     | process IDs to be killed: [27925] (in reverse order)
[2026-01-15 08:34:19] 2026-01-15 07:33:48,231 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 08:34:19] 2026-01-15 07:33:48,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 08:34:19] 2026-01-15 07:33:48,235 | INFO     | did not find any defunct processes belonging to 27925
[2026-01-15 08:34:19] 2026-01-15 07:33:48,238 | INFO     | did not find any defunct processes belonging to 27925
[2026-01-15 08:34:19] 2026-01-15 07:33:48,238 | INFO     | ready for new job
[2026-01-15 08:34:19] 2026-01-15 07:33:48,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 08:34:19] 2026-01-15 07:33:48,238 | INFO     | ***************************************
[2026-01-15 08:34:19] 2026-01-15 07:33:48,238 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 08:34:19] 2026-01-15 07:33:48,238 | INFO     | ***************************************
[2026-01-15 08:34:19] 2026-01-15 07:33:48,238 | INFO     | 
[2026-01-15 08:34:19] 2026-01-15 07:33:48,252 | INFO     | architecture information:
[2026-01-15 08:34:19] 2026-01-15 07:33:48,252 | INFO     | executing command: cat /etc/os-release
[2026-01-15 08:34:19] 2026-01-15 07:33:48,259 | INFO     | cat /etc/os-release:
[2026-01-15 08:34:19] NAME="CentOS Linux"
[2026-01-15 08:34:19] VERSION="7 (Core)"
[2026-01-15 08:34:19] ID="centos"
[2026-01-15 08:34:19] ID_LIKE="rhel fedora"
[2026-01-15 08:34:19] VERSION_ID="7"
[2026-01-15 08:34:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 08:34:19] ANSI_COLOR="0;31"
[2026-01-15 08:34:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 08:34:19] HOME_URL="https://www.centos.org/"
[2026-01-15 08:34:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 08:34:19] 
[2026-01-15 08:34:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 08:34:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 08:34:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 08:34:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 08:34:19] 
[2026-01-15 08:34:19] 2026-01-15 07:33:48,259 | INFO     | ***************************************
[2026-01-15 08:34:19] 2026-01-15 07:33:48,761 | INFO     | executing command: df -mP /tmp/job_11019392/atlas/pilot/slots/0
[2026-01-15 08:34:19] 2026-01-15 07:33:48,767 | INFO     | sufficient remaining disk space (226226077696 B)
[2026-01-15 08:34:19] 2026-01-15 07:33:48,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 08:34:19] 2026-01-15 07:33:48,768 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 08:34:19] 2026-01-15 07:33:48,768 | INFO     | update_server=False
[2026-01-15 08:34:19] 2026-01-15 07:33:48,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 08:34:19] 2026-01-15 07:33:48,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:34:19] 2026-01-15 07:33:48,928 | INFO     | all payload control threads have been joined
[2026-01-15 08:34:19] 2026-01-15 07:33:49,060 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 08:34:19] 2026-01-15 07:33:49,061 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 08:34:19] 2026-01-15 07:33:49,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:34:19] 2026-01-15 07:33:49,061 | INFO     | will abort loop
[2026-01-15 08:34:19] 2026-01-15 07:33:49,207 | INFO     | all data control threads have been joined
[2026-01-15 08:34:19] 2026-01-15 07:33:49,310 | INFO     | [monitor] cgroup control has ended
[2026-01-15 08:34:19] 2026-01-15 07:33:49,773 | INFO     | [job] retrieve thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:49,773 | INFO     | [job] queue monitor thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:49,933 | INFO     | [payload] control thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:50,004 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:50,033 | INFO     | all job control threads have been joined
[2026-01-15 08:34:19] 2026-01-15 07:33:50,063 | INFO     | [payload] validate_post thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:50,066 | INFO     | [job] job monitor thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:50,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 08:34:19] 2026-01-15 07:33:50,212 | INFO     | [data] control thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:50,236 | INFO     | [job] validate thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:50,404 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:50,431 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:50,454 | INFO     | [payload] failed_post thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:50,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 08:34:19] 2026-01-15 07:33:50,768 | INFO     | [data] copytool_in thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:51,018 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:51,038 | INFO     | [job] control thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:52,189 | INFO     | [data] copytool_out thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:54,503 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 08:34:19] 2026-01-15 07:33:55,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2026-01-15 08:34:19] 2026-01-15 07:34:00,093 | INFO     | all workflow threads have been joined
[2026-01-15 08:34:19] 2026-01-15 07:34:00,094 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 08:34:19] 2026-01-15 07:34:00,094 | INFO     | traces error code: 0
[2026-01-15 08:34:19] 2026-01-15 07:34:00,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 08:34:19] 2026-01-15 07:34:18,896 | INFO     | PID=19581 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 08:34:19] 2026-01-15 07:34:18,896 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 08:34:19] 2026-01-15 07:34:18,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 08:34:19] 2026-01-15 07:34:18,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 08:34:19] 2026-01-15 07:34:18,896 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 08:34:19] 2026-01-15 07:34:18,896 | INFO     | [monitor] control thread has ended
[2026-01-15 08:34:19] 2026-01-15 07:34:18,945 [wrapper] ==== pilot stdout END ====
[2026-01-15 08:34:19] 2026-01-15 07:34:18,946 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 08:34:19] 2026-01-15 07:34:18,947 [wrapper] pilotpid: 19581
[2026-01-15 08:34:19] 2026-01-15 07:34:18,948 [wrapper] Pilot exit status: 0
[2026-01-15 08:34:19] 2026-01-15 07:34:18,952 [wrapper] pandaids: 6969261409
[2026-01-15 08:34:19] 2026-01-15 07:34:18,973 [wrapper] cleanup supervisor_pilot 11653 19582
[2026-01-15 08:34:19] 2026-01-15 07:34:18,975 [wrapper] Test setup, not cleaning
[2026-01-15 08:34:19] 2026-01-15 07:34:18,976 [wrapper] apfmon messages muted
[2026-01-15 08:34:19] 2026-01-15 07:34:18,977 [wrapper] ==== wrapper stdout END ====
[2026-01-15 08:34:19] 2026-01-15 07:34:18,978 [wrapper] ==== wrapper stderr END ====
[2026-01-15 08:34:19]  *** Error codes and diagnostics ***
[2026-01-15 08:34:19]     "exeErrorCode": 0,
[2026-01-15 08:34:19]     "exeErrorDiag": "",
[2026-01-15 08:34:19]     "pilotErrorCode": 0,
[2026-01-15 08:34:19]     "pilotErrorDiag": "",
[2026-01-15 08:34:19]  *** Listing of results directory ***
[2026-01-15 08:34:19] total 738876
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user    579449 Jan 13 22:50 pilot3.tar.gz
[2026-01-15 08:34:19] -rwx------ 1 mf493845 unix-user     36322 Jan 13 22:56 runpilot2-wrapper.sh
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user      5112 Jan 13 23:04 queuedata.json
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user       100 Jan 15 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 08:34:19] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 15 05:33 run_atlas
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user       105 Jan 15 05:33 job.xml
[2026-01-15 08:34:19] -rw-r--r-- 2 mf493845 unix-user 593505661 Jan 15 08:01 EVNT.32794306._000108.pool.root.1
[2026-01-15 08:34:19] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 15 08:01 start_atlas.sh
[2026-01-15 08:34:19] drwxrwx--x 2 mf493845 unix-user       100 Jan 15 08:01 shared
[2026-01-15 08:34:19] -rw-r--r-- 2 mf493845 unix-user    592393 Jan 15 08:01 input.tar.gz
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user      6390 Jan 15 08:01 init_data.xml
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user         0 Jan 15 08:01 boinc_setup_complete
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user      8192 Jan 15 08:01 boinc_mmap_file
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user         0 Jan 15 08:01 boinc_lockfile
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user      2503 Jan 15 08:01 pandaJob.out
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user    999472 Jan 15 08:01 agis_schedconf.cvmfs.json
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user   1516246 Jan 15 08:01 agis_ddmendpoints.agis.ALL.json
[2026-01-15 08:34:19] drwx------ 5 mf493845 unix-user       440 Jan 15 08:01 pilot3
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user 158005196 Jan 15 08:33 HITS.48215263._002678.pool.root.1
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user      1013 Jan 15 08:33 memory_monitor_summary.json
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user    272995 Jan 15 08:33 log.48215263._002678.job.log.tgz.1
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user      7768 Jan 15 08:33 heartbeat.json
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user       745 Jan 15 08:34 pilotlog.txt
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user        95 Jan 15 08:34 pilot_heartbeat.json
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user    327292 Jan 15 08:34 log.48215263._002678.job.log.1
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user       357 Jan 15 08:34 output.list
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user       620 Jan 15 08:34 runtime_log
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user    624640 Jan 15 08:34 result.tar.gz
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user      9220 Jan 15 08:34 runtime_log.err
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user       642 Jan 15 08:34 h7FNDmVY1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7SiKDmqUU3un.diag
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user     22280 Jan 15 08:34 stderr.txt
[2026-01-15 08:34:19] HITS file was successfully produced:
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user 158005196 Jan 15 08:33 shared/HITS.pool.root.1
[2026-01-15 08:34:19]  *** Contents of shared directory: ***
[2026-01-15 08:34:19] total 735108
[2026-01-15 08:34:19] -rw-r--r-- 2 mf493845 unix-user 593505661 Jan 15 08:01 ATLAS.root_0
[2026-01-15 08:34:19] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 15 08:01 start_atlas.sh
[2026-01-15 08:34:19] -rw-r--r-- 2 mf493845 unix-user    592393 Jan 15 08:01 input.tar.gz
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user 158005196 Jan 15 08:33 HITS.pool.root.1
[2026-01-15 08:34:19] -rw------- 1 mf493845 unix-user    624640 Jan 15 08:34 result.tar.gz
08:34:20 (14583): run_atlas exited; CPU time 13665.853013
08:34:20 (14583): called boinc_finish(0)

</stderr_txt>
]]>

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