Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:57:50 (20846): wrapper (7.7.26015): starting
18:57:50 (20846): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 18:57:50] Arguments: --nthreads 8
[2026-01-14 18:57:50] Threads: 8
[2026-01-14 18:57:50] Checking for CVMFS
[2026-01-14 18:57:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 18:57:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 18:57:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 18:57:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 18:57:51] 2.11.2.0 2827 114328 80312 155149 3 59 18632610 20275201 1 130560 0 23378581 99.747 7803512 30050 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 18:57:51] CVMFS is ok
[2026-01-14 18:57:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 18:57:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 18:57:51] Further information can be found at the LHC@home message board.
[2026-01-14 18:57:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 18:57:51] Checking for apptainer binary...
[2026-01-14 18:57:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 18:57:51] Running /usr/bin/apptainer --version
[2026-01-14 18:57:51] apptainer version 1.3.2-1.el7
[2026-01-14 18:57:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 18:57:53] c-204-30.aglt2.org
[2026-01-14 18:57:53] apptainer works
[2026-01-14 18:57:53] Set ATHENA_PROC_NUMBER=8
[2026-01-14 18:57:53] Set ATHENA_CORE_NUMBER=8
[2026-01-14 18:57:53] Starting ATLAS job with PandaID=6969528079
[2026-01-14 18:57:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 20:18:38]  *** The last 200 lines of the pilot log: ***
[2026-01-14 20:18:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 20:18:38]  replicas=None
[2026-01-14 20:18:38]  scope=mc23_13p6TeV
[2026-01-14 20:18:38]  status=None
[2026-01-14 20:18:38]  status_code=0
[2026-01-14 20:18:38]  storage_token=
[2026-01-14 20:18:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969528079/log.48215263._029505.job.log.tgz.1
[2026-01-14 20:18:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/43/log.48215263._029505.job.log.tgz.1
[2026-01-14 20:18:38]  workdir=None
[2026-01-14 20:18:38] ]
[2026-01-14 20:18:38] 2026-01-15 01:17:56,257 | INFO     | transferring file log.48215263._029505.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969528079/log.48215263._029505.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 20:18:38] 2026-01-15 01:17:56,258 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969528079/log.48215263._029505.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._029505.job
[2026-01-14 20:18:38] 2026-01-15 01:17:56,287 | INFO     | adding to output.list: log.48215263._029505.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/43/log.48215263._029505.job.log.tg
[2026-01-14 20:18:38] 2026-01-15 01:17:56,288 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 20:18:38] 2026-01-15 01:17:56,288 | INFO     | summary of transferred files:
[2026-01-14 20:18:38] 2026-01-15 01:17:56,288 | INFO     |  -- lfn=log.48215263._029505.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 20:18:38] 2026-01-15 01:17:56,289 | INFO     | stage-out finished correctly
[2026-01-14 20:18:38] 2026-01-15 01:17:57,135 | INFO     | time since job start (4787s) is within the limit (349056.0s)
[2026-01-14 20:18:38] 2026-01-15 01:17:58,368 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 20:18:38] 2026-01-15 01:17:58,609 | INFO     | job 6969528079 has state=finished
[2026-01-14 20:18:38] 2026-01-15 01:17:58,609 | INFO     | preparing for final server update for job 6969528079 in state='finished'
[2026-01-14 20:18:38] 2026-01-15 01:17:58,610 | INFO     | this job has now completed (state=finished)
[2026-01-14 20:18:38] 2026-01-15 01:17:58,611 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 20:18:38] 2026-01-15 01:17:58,611 | INFO     | log transfer has been attempted: DONE
[2026-01-14 20:18:38] 2026-01-15 01:17:58,611 | INFO     | job 6969528079 has finished - writing final server update
[2026-01-14 20:18:38] 2026-01-15 01:17:58,612 | INFO     | total number of processed events: 400 (read)
[2026-01-14 20:18:38] 2026-01-15 01:17:58,613 | INFO     | executing command: lscpu
[2026-01-14 20:18:38] 2026-01-15 01:17:58,646 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 20:18:38] 2026-01-15 01:17:59,142 | INFO     | time since job start (4789s) is within the limit (349056.0s)
[2026-01-14 20:18:38] 2026-01-15 01:18:01,148 | INFO     | time since job start (4791s) is within the limit (349056.0s)
[2026-01-14 20:18:38] 2026-01-15 01:18:01,451 | WARNING  | process 30931 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 20:18:38] 2026-01-15 01:18:01,452 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969528079/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 20:18:38] 2026-01-15 01:18:01,548 | INFO     | number of running child processes to parent process 30931: 1
[2026-01-14 20:18:38] 2026-01-15 01:18:01,549 | INFO     | maximum number of monitored processes: 6
[2026-01-14 20:18:38] 2026-01-15 01:18:03,153 | INFO     | time since job start (4793s) is within the limit (349056.0s)
[2026-01-14 20:18:38] 2026-01-15 01:18:04,051 | INFO     | monitor loop #356: job 0:6969528079 is in state 'finished'
[2026-01-14 20:18:38] 2026-01-15 01:18:04,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 20:18:38] 2026-01-15 01:18:05,158 | INFO     | time since job start (4795s) is within the limit (349056.0s)
[2026-01-14 20:18:38] 2026-01-15 01:18:05,881 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 20:18:38] 2026-01-15 01:18:05,885 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-14 20:18:38] 2026-01-15 01:18:05,890 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969528079/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 20:18:38] 2026-01-15 01:18:05,890 | INFO     | extracted standard info from prmon json
[2026-01-14 20:18:38] 2026-01-15 01:18:05,891 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 20:18:38] 2026-01-15 01:18:05,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 20:18:38] 2026-01-15 01:18:05,891 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 20:18:38] 2026-01-15 01:18:05,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 20:18:38] 2026-01-15 01:18:05,893 | INFO     | fitting pss+swap vs Time
[2026-01-14 20:18:38] 2026-01-15 01:18:05,894 | INFO     | sum of square deviations: 110960220.0
[2026-01-14 20:18:38] 2026-01-15 01:18:05,894 | INFO     | sum of deviations: -5501048015.0
[2026-01-14 20:18:38] 2026-01-15 01:18:05,894 | INFO     | mean x: 1768437562.0
[2026-01-14 20:18:38] 2026-01-15 01:18:05,894 | INFO     | mean y: 2593749.2816901407
[2026-01-14 20:18:38] 2026-01-15 01:18:05,895 | INFO     | intersect: 87675995443.07376
[2026-01-14 20:18:38] 2026-01-15 01:18:05,895 | INFO     | chi2: 0.07288751933880754
[2026-01-14 20:18:38] 2026-01-15 01:18:05,895 | INFO     | current memory leak: -49.58 B/s (using 71 data points, chi2=0.07)
[2026-01-14 20:18:38] 2026-01-15 01:18:05,895 | INFO     | could have reported an average CPU frequency of 1890 MHz (6 samples)
[2026-01-14 20:18:38] 2026-01-15 01:18:05,896 | INFO     | ..............................
[2026-01-14 20:18:38] 2026-01-15 01:18:05,896 | INFO     | . Timing measurements:
[2026-01-14 20:18:38] 2026-01-15 01:18:05,896 | INFO     | . get job = 0 s
[2026-01-14 20:18:38] 2026-01-15 01:18:05,896 | INFO     | . initial setup = 2 s
[2026-01-14 20:18:38] 2026-01-15 01:18:05,896 | INFO     | . payload setup = 8 s
[2026-01-14 20:18:38] 2026-01-15 01:18:05,896 | INFO     | . stage-in = 0 s
[2026-01-14 20:18:38] 2026-01-15 01:18:05,896 | INFO     | . payload execution = 4755 s
[2026-01-14 20:18:38] 2026-01-15 01:18:05,896 | INFO     | . stage-out = 0 s
[2026-01-14 20:18:38] 2026-01-15 01:18:05,897 | INFO     | . log creation = 0 s
[2026-01-14 20:18:38] 2026-01-15 01:18:05,897 | INFO     | ..............................
[2026-01-14 20:18:38] 2026-01-15 01:18:06,428 | INFO     | 
[2026-01-14 20:18:38] 2026-01-15 01:18:06,429 | INFO     | job summary report
[2026-01-14 20:18:38] 2026-01-15 01:18:06,429 | INFO     | --------------------------------------------------
[2026-01-14 20:18:38] 2026-01-15 01:18:06,429 | INFO     | PanDA job id: 6969528079
[2026-01-14 20:18:38] 2026-01-15 01:18:06,429 | INFO     | task id: 48215263
[2026-01-14 20:18:38] 2026-01-15 01:18:06,429 | INFO     | errors: (none)
[2026-01-14 20:18:38] 2026-01-15 01:18:06,430 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 20:18:38] 2026-01-15 01:18:06,430 | INFO     | pilot state: finished 
[2026-01-14 20:18:38] 2026-01-15 01:18:06,430 | INFO     | transexitcode: 0
[2026-01-14 20:18:38] 2026-01-15 01:18:06,430 | INFO     | exeerrorcode: 0
[2026-01-14 20:18:38] 2026-01-15 01:18:06,430 | INFO     | exeerrordiag: 
[2026-01-14 20:18:38] 2026-01-15 01:18:06,430 | INFO     | exitcode: 0
[2026-01-14 20:18:38] 2026-01-15 01:18:06,430 | INFO     | exitmsg: OK
[2026-01-14 20:18:38] 2026-01-15 01:18:06,431 | INFO     | cpuconsumptiontime: 34673 s
[2026-01-14 20:18:38] 2026-01-15 01:18:06,431 | INFO     | nevents: 400
[2026-01-14 20:18:38] 2026-01-15 01:18:06,431 | INFO     | neventsw: 0
[2026-01-14 20:18:38] 2026-01-15 01:18:06,431 | INFO     | pid: 30931
[2026-01-14 20:18:38] 2026-01-15 01:18:06,431 | INFO     | pgrp: 30931
[2026-01-14 20:18:38] 2026-01-15 01:18:06,431 | INFO     | corecount: 8
[2026-01-14 20:18:38] 2026-01-15 01:18:06,432 | INFO     | event service: False
[2026-01-14 20:18:38] 2026-01-15 01:18:06,432 | INFO     | sizes: {0: 2283781, 1: 2283980, 7: 2284242, 11: 2284270, 4767: 2310458, 4768: 2319639, 4771: 2319639, 4778: 2319833}
[2026-01-14 20:18:38] 2026-01-15 01:18:06,432 | INFO     | --------------------------------------------------
[2026-01-14 20:18:38] 2026-01-15 01:18:06,432 | INFO     | 
[2026-01-14 20:18:38] 2026-01-15 01:18:06,432 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 20:18:38] 2026-01-15 01:18:06,461 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,461 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,461 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,461 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,463 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 20:18:38] 2026-01-15 01:18:06,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,464 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 20:18:38] 2026-01-15 01:18:06,464 | INFO     | job 6969528079 has completed (purged errors)
[2026-01-14 20:18:38] 2026-01-15 01:18:06,464 | INFO     | overall cleanup function is called
[2026-01-14 20:18:38] 2026-01-15 01:18:07,473 | INFO     | --- collectZombieJob: --- 10, [30931]
[2026-01-14 20:18:38] 2026-01-15 01:18:07,473 | INFO     | zombie collector waiting for pid 30931
[2026-01-14 20:18:38] 2026-01-15 01:18:07,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 20:18:38] 2026-01-15 01:18:07,474 | INFO     | collected zombie processes
[2026-01-14 20:18:38] 2026-01-15 01:18:07,474 | INFO     | will attempt to kill all subprocesses of pid=30931
[2026-01-14 20:18:38] 2026-01-15 01:18:07,563 | INFO     | process IDs to be killed: [30931] (in reverse order)
[2026-01-14 20:18:38] 2026-01-15 01:18:07,627 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 20:18:38] 2026-01-15 01:18:07,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 20:18:38] 2026-01-15 01:18:07,631 | INFO     | did not find any defunct processes belonging to 30931
[2026-01-14 20:18:38] 2026-01-15 01:18:07,634 | INFO     | did not find any defunct processes belonging to 30931
[2026-01-14 20:18:38] 2026-01-15 01:18:07,634 | INFO     | ready for new job
[2026-01-14 20:18:38] 2026-01-15 01:18:07,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 20:18:38] 2026-01-15 01:18:07,636 | INFO     | ***************************************
[2026-01-14 20:18:38] 2026-01-15 01:18:07,636 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 20:18:38] 2026-01-15 01:18:07,636 | INFO     | ***************************************
[2026-01-14 20:18:38] 2026-01-15 01:18:07,636 | INFO     | 
[2026-01-14 20:18:38] 2026-01-15 01:18:07,637 | INFO     | architecture information:
[2026-01-14 20:18:38] 2026-01-15 01:18:07,638 | INFO     | executing command: cat /etc/os-release
[2026-01-14 20:18:38] 2026-01-15 01:18:07,659 | INFO     | cat /etc/os-release:
[2026-01-14 20:18:38] NAME="CentOS Linux"
[2026-01-14 20:18:38] VERSION="7 (Core)"
[2026-01-14 20:18:38] ID="centos"
[2026-01-14 20:18:38] ID_LIKE="rhel fedora"
[2026-01-14 20:18:38] VERSION_ID="7"
[2026-01-14 20:18:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 20:18:38] ANSI_COLOR="0;31"
[2026-01-14 20:18:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 20:18:38] HOME_URL="https://www.centos.org/"
[2026-01-14 20:18:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 20:18:38] 
[2026-01-14 20:18:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 20:18:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 20:18:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 20:18:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 20:18:38] 
[2026-01-14 20:18:38] 2026-01-15 01:18:07,660 | INFO     | ***************************************
[2026-01-14 20:18:38] 2026-01-15 01:18:08,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 20:18:38] 2026-01-15 01:18:08,187 | INFO     | sufficient remaining disk space (17834180608 B)
[2026-01-14 20:18:38] 2026-01-15 01:18:08,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 20:18:38] 2026-01-15 01:18:08,188 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 20:18:38] 2026-01-15 01:18:08,188 | INFO     | update_server=False
[2026-01-14 20:18:38] 2026-01-15 01:18:08,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 20:18:38] 2026-01-15 01:18:08,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 20:18:38] 2026-01-15 01:18:08,189 | INFO     | aborting loop
[2026-01-14 20:18:38] 2026-01-15 01:18:08,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 20:18:38] 2026-01-15 01:18:09,194 | INFO     | [job] retrieve thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:09,195 | INFO     | [job] job monitor thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:09,239 | INFO     | all data control threads have been joined
[2026-01-14 20:18:38] 2026-01-15 01:18:09,287 | INFO     | [payload] validate_post thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:09,388 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:09,398 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:09,403 | INFO     | [data] copytool_in thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:09,410 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 20:18:38] 2026-01-15 01:18:09,438 | INFO     | all payload control threads have been joined
[2026-01-14 20:18:38] 2026-01-15 01:18:09,604 | INFO     | [payload] failed_post thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:09,607 | INFO     | all job control threads have been joined
[2026-01-14 20:18:38] 2026-01-15 01:18:09,921 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:10,245 | INFO     | [data] control thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:10,443 | INFO     | [payload] control thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:10,613 | INFO     | [job] control thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:10,671 | INFO     | [job] validate thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:10,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 20:18:38] 2026-01-15 01:18:11,415 | INFO     | [data] copytool_out thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:11,997 | INFO     | [job] queue monitor thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:12,967 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:17,935 | INFO     | [monitor] cgroup control has ended
[2026-01-14 20:18:38] 2026-01-15 01:18:18,984 | INFO     | job.realtimelogging is not enabled
[2026-01-14 20:18:38] 2026-01-15 01:18:19,990 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 20:18:38] 2026-01-15 01:18:21,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610981148480)>', '<ExcThread(monitor, started 140610182838016)>']
[2026-01-14 20:18:38] 2026-01-15 01:18:26,627 | INFO     | all workflow threads have been joined
[2026-01-14 20:18:38] 2026-01-15 01:18:26,628 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 20:18:38] 2026-01-15 01:18:26,633 | INFO     | traces error code: 0
[2026-01-14 20:18:38] 2026-01-15 01:18:26,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 20:18:38] 2026-01-15 01:18:38,374 | INFO     | PID=24570 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 20:18:38] 2026-01-15 01:18:38,375 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 20:18:38] 2026-01-15 01:18:38,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 20:18:38] 2026-01-15 01:18:38,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 20:18:38] 2026-01-15 01:18:38,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 20:18:38] 2026-01-15 01:18:38,375 | INFO     | [monitor] control thread has ended
[2026-01-14 20:18:38] 2026-01-15 01:18:38,486 [wrapper] ==== pilot stdout END ====
[2026-01-14 20:18:38] 2026-01-15 01:18:38,490 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 20:18:38] 2026-01-15 01:18:38,494 [wrapper] pilotpid: 24570
[2026-01-14 20:18:38] 2026-01-15 01:18:38,499 [wrapper] Pilot exit status: 0
[2026-01-14 20:18:38] 2026-01-15 01:18:38,517 [wrapper] pandaids: 6969528079
[2026-01-14 20:18:38] 2026-01-15 01:18:38,565 [wrapper] cleanup supervisor_pilot  2769 24571
[2026-01-14 20:18:38] 2026-01-15 01:18:38,569 [wrapper] Test setup, not cleaning
[2026-01-14 20:18:38] 2026-01-15 01:18:38,574 [wrapper] apfmon messages muted
[2026-01-14 20:18:38] 2026-01-15 01:18:38,578 [wrapper] ==== wrapper stdout END ====
[2026-01-14 20:18:38] 2026-01-15 01:18:38,582 [wrapper] ==== wrapper stderr END ====
[2026-01-14 20:18:38]  *** Error codes and diagnostics ***
[2026-01-14 20:18:38]     "exeErrorCode": 0,
[2026-01-14 20:18:38]     "exeErrorDiag": "",
[2026-01-14 20:18:38]     "pilotErrorCode": 0,
[2026-01-14 20:18:38]     "pilotErrorDiag": "",
[2026-01-14 20:18:38]  *** Listing of results directory ***
[2026-01-14 20:18:38] total 728644
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 12:34 pilot3.tar.gz
[2026-01-14 20:18:38] -rwx------ 1 boincer umatlas     36322 Jan 14 12:37 runpilot2-wrapper.sh
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 12:40 queuedata.json
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas       100 Jan 14 18:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 20:18:38] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 18:57 run_atlas
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas       105 Jan 14 18:57 job.xml
[2026-01-14 20:18:38] -rw-r--r-- 2 boincer umatlas 594031995 Jan 14 18:57 EVNT.32794306._001181.pool.root.1
[2026-01-14 20:18:38] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 18:57 start_atlas.sh
[2026-01-14 20:18:38] drwxrwx--x 2 boincer umatlas      4096 Jan 14 18:57 shared
[2026-01-14 20:18:38] -rw-r--r-- 2 boincer umatlas    592408 Jan 14 18:57 input.tar.gz
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas         0 Jan 14 18:57 boinc_lockfile
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas      2509 Jan 14 18:57 pandaJob.out
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas        57 Jan 14 18:57 setup.sh.local
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas    999488 Jan 14 18:58 agis_schedconf.cvmfs.json
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas   1516246 Jan 14 18:58 agis_ddmendpoints.agis.ALL.json
[2026-01-14 20:18:38] drwx------ 5 boincer umatlas      4096 Jan 14 18:58 pilot3
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas      5910 Jan 14 20:12 init_data.xml
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas 146139049 Jan 14 20:17 HITS.48215263._029505.pool.root.1
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas       530 Jan 14 20:17 boinc_task_state.xml
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas      1045 Jan 14 20:17 memory_monitor_summary.json
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas    326614 Jan 14 20:17 log.48215263._029505.job.log.tgz.1
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas      7844 Jan 14 20:18 heartbeat.json
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 20:18 boinc_mmap_file
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas        27 Jan 14 20:18 wrapper_checkpoint.txt
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas        95 Jan 14 20:18 pilot_heartbeat.json
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas       745 Jan 14 20:18 pilotlog.txt
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas    691794 Jan 14 20:18 log.48215263._029505.job.log.1
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas       357 Jan 14 20:18 output.list
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas       620 Jan 14 20:18 runtime_log
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas   1034240 Jan 14 20:18 result.tar.gz
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas      9342 Jan 14 20:18 runtime_log.err
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas       658 Jan 14 20:18 iD3NDmGzJ08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDma9rKDmebnrOn.diag
[2026-01-14 20:18:38] -rw-r--r-- 1 boincer umatlas     21899 Jan 14 20:18 stderr.txt
[2026-01-14 20:18:38] HITS file was successfully produced:
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas 146139049 Jan 14 20:17 shared/HITS.pool.root.1
[2026-01-14 20:18:38]  *** Contents of shared directory: ***
[2026-01-14 20:18:38] total 724444
[2026-01-14 20:18:38] -rw-r--r-- 2 boincer umatlas 594031995 Jan 14 18:57 ATLAS.root_0
[2026-01-14 20:18:38] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 18:57 start_atlas.sh
[2026-01-14 20:18:38] -rw-r--r-- 2 boincer umatlas    592408 Jan 14 18:57 input.tar.gz
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas 146139049 Jan 14 20:17 HITS.pool.root.1
[2026-01-14 20:18:38] -rw------- 1 boincer umatlas   1034240 Jan 14 20:18 result.tar.gz
20:18:39 (20846): run_atlas exited; CPU time 34635.332496
20:18:39 (20846): called boinc_finish(0)

</stderr_txt>
]]>

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