Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:11:25 (646522): wrapper (7.7.26015): starting
12:11:25 (646522): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 12:11:25] Arguments: --nthreads 3
[2026-01-15 12:11:25] Threads: 3
[2026-01-15 12:11:25] Checking for CVMFS
[2026-01-15 12:11:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 12:11:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 12:11:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 12:11:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 12:11:26] 2.13.3.0 110733 1706 89492 155153 3 56 15047163 15728640 0 130560 0 1695879 99.992 67327 17 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-15 12:11:26] CVMFS is ok
[2026-01-15 12:11:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 12:11:26] Checking for apptainer binary...
[2026-01-15 12:11:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 12:11:26] Running /usr/bin/apptainer --version
[2026-01-15 12:11:26] apptainer version 1.4.5-2.el9
[2026-01-15 12:11:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 12:11:26] testio003
[2026-01-15 12:11:26] apptainer works
[2026-01-15 12:11:26] Set ATHENA_PROC_NUMBER=3
[2026-01-15 12:11:26] Set ATHENA_CORE_NUMBER=3
[2026-01-15 12:11:26] Starting ATLAS job with PandaID=6969630454
[2026-01-15 12:11:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 13:25:58]  *** The last 200 lines of the pilot log: ***
[2026-01-15 13:25:58] 2026-01-15 04:24:58,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:24:59,585 | INFO     | time since job start (4405s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:00,630 | INFO     | PID=650198 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 13:25:58] 2026-01-15 04:25:00,830 | INFO     | monitor loop #343: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:00,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:01,631 | INFO     | time since job start (4407s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:03,333 | INFO     | monitor loop #344: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:03,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:03,636 | INFO     | time since job start (4409s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:05,641 | INFO     | time since job start (4411s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:05,835 | INFO     | monitor loop #345: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:05,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:07,642 | INFO     | time since job start (4413s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:08,338 | INFO     | monitor loop #346: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:08,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:09,647 | INFO     | time since job start (4415s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:10,840 | INFO     | monitor loop #347: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:10,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:11,652 | INFO     | time since job start (4417s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:13,341 | INFO     | monitor loop #348: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:13,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:13,658 | INFO     | time since job start (4419s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:15,663 | INFO     | time since job start (4421s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:15,844 | INFO     | monitor loop #349: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:15,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:17,668 | INFO     | time since job start (4423s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:18,347 | INFO     | monitor loop #350: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:18,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:19,673 | INFO     | time since job start (4425s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:20,850 | INFO     | monitor loop #351: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:20,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:21,678 | INFO     | time since job start (4427s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:22,722 | INFO     | PID=650198 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 13:25:58] 2026-01-15 04:25:23,352 | INFO     | monitor loop #352: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:23,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:23,723 | INFO     | time since job start (4429s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:25,728 | INFO     | time since job start (4431s) is within the limit (349056.0s)
[2026-01-15 13:25:58] 2026-01-15 04:25:25,855 | INFO     | monitor loop #353: job 0:6969630454 is in state 'finished'
[2026-01-15 13:25:58] 2026-01-15 04:25:25,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:25:58] 2026-01-15 04:25:26,789 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 13:25:58] 2026-01-15 04:25:26,790 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3661.55525
[2026-01-15 13:25:58] 2026-01-15 04:25:26,790 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6969630454/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 13:25:58] 2026-01-15 04:25:26,790 | INFO     | extracted standard info from prmon json
[2026-01-15 13:25:58] 2026-01-15 04:25:26,791 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 13:25:58] 2026-01-15 04:25:26,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 13:25:58] 2026-01-15 04:25:26,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 13:25:58] 2026-01-15 04:25:26,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | fitting pss+swap vs Time
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | sum of square deviations: 81266640.0
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | sum of deviations: -912648053.5
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | mean x: 1768448940.5
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | mean y: 2485358.859375
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | intersect: 19862682399.877216
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | chi2: 0.02741189637598419
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | current memory leak: -11.23 B/s (using 64 data points, chi2=0.03)
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | could have reported an average CPU frequency of 3622 MHz (6 samples)
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | ..............................
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | . Timing measurements:
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | . get job = 0 s
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | . initial setup = 4 s
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | . payload setup = 3 s
[2026-01-15 13:25:58] 2026-01-15 04:25:26,792 | INFO     | . stage-in = 0 s
[2026-01-15 13:25:58] 2026-01-15 04:25:26,793 | INFO     | . payload execution = 4330 s
[2026-01-15 13:25:58] 2026-01-15 04:25:26,793 | INFO     | . stage-out = 0 s
[2026-01-15 13:25:58] 2026-01-15 04:25:26,793 | INFO     | . log creation = 0 s
[2026-01-15 13:25:58] 2026-01-15 04:25:26,793 | INFO     | ..............................
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | 
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | job summary report
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | --------------------------------------------------
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | PanDA job id: 6969630454
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | task id: 48215263
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | errors: (none)
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | pilot state: finished 
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | transexitcode: 0
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | exeerrorcode: 0
[2026-01-15 13:25:58] 2026-01-15 04:25:26,829 | INFO     | exeerrordiag: 
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | exitcode: 0
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | exitmsg: OK
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | cpuconsumptiontime: 11898 s
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | nevents: 400
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | neventsw: 0
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | pid: 656730
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | pgrp: 656730
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | corecount: 3
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | event service: False
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | sizes: {0: 2283952, 2: 2284214, 11: 2284242, 4336: 2310353, 4337: 2319407, 4419: 2319545}
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | --------------------------------------------------
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | 
[2026-01-15 13:25:58] 2026-01-15 04:25:26,830 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-15 13:25:58] 2026-01-15 04:25:26,841 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,841 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,841 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | job 6969630454 has completed (purged errors)
[2026-01-15 13:25:58] 2026-01-15 04:25:26,842 | INFO     | overall cleanup function is called
[2026-01-15 13:25:58] 2026-01-15 04:25:27,848 | INFO     | --- collectZombieJob: --- 10, [656730]
[2026-01-15 13:25:58] 2026-01-15 04:25:27,848 | INFO     | zombie collector waiting for pid 656730
[2026-01-15 13:25:58] 2026-01-15 04:25:27,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 13:25:58] 2026-01-15 04:25:27,848 | INFO     | collected zombie processes
[2026-01-15 13:25:58] 2026-01-15 04:25:27,848 | INFO     | will attempt to kill all subprocesses of pid=656730
[2026-01-15 13:25:58] 2026-01-15 04:25:27,880 | INFO     | process IDs to be killed: [656730] (in reverse order)
[2026-01-15 13:25:58] 2026-01-15 04:25:27,899 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 13:25:58] 2026-01-15 04:25:27,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 13:25:58] 2026-01-15 04:25:27,900 | INFO     | did not find any defunct processes belonging to 656730
[2026-01-15 13:25:58] 2026-01-15 04:25:27,901 | INFO     | did not find any defunct processes belonging to 656730
[2026-01-15 13:25:58] 2026-01-15 04:25:27,901 | INFO     | ready for new job
[2026-01-15 13:25:58] 2026-01-15 04:25:27,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 13:25:58] 2026-01-15 04:25:27,902 | INFO     | ***************************************
[2026-01-15 13:25:58] 2026-01-15 04:25:27,902 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 13:25:58] 2026-01-15 04:25:27,902 | INFO     | ***************************************
[2026-01-15 13:25:58] 2026-01-15 04:25:27,902 | INFO     | 
[2026-01-15 13:25:58] 2026-01-15 04:25:27,902 | INFO     | architecture information:
[2026-01-15 13:25:58] 2026-01-15 04:25:27,903 | INFO     | executing command: cat /etc/os-release
[2026-01-15 13:25:58] 2026-01-15 04:25:27,912 | INFO     | cat /etc/os-release:
[2026-01-15 13:25:58] NAME="CentOS Linux"
[2026-01-15 13:25:58] VERSION="7 (Core)"
[2026-01-15 13:25:58] ID="centos"
[2026-01-15 13:25:58] ID_LIKE="rhel fedora"
[2026-01-15 13:25:58] VERSION_ID="7"
[2026-01-15 13:25:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 13:25:58] ANSI_COLOR="0;31"
[2026-01-15 13:25:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 13:25:58] HOME_URL="https://www.centos.org/"
[2026-01-15 13:25:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 13:25:58] 
[2026-01-15 13:25:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 13:25:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 13:25:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 13:25:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 13:25:58] 
[2026-01-15 13:25:58] 2026-01-15 04:25:27,912 | INFO     | ***************************************
[2026-01-15 13:25:58] 2026-01-15 04:25:28,415 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-15 13:25:58] 2026-01-15 04:25:28,425 | INFO     | sufficient remaining disk space (47395635200 B)
[2026-01-15 13:25:58] 2026-01-15 04:25:28,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 13:25:58] 2026-01-15 04:25:28,425 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 13:25:58] 2026-01-15 04:25:28,425 | INFO     | update_server=False
[2026-01-15 13:25:58] 2026-01-15 04:25:28,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 13:25:58] 2026-01-15 04:25:28,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 13:25:58] 2026-01-15 04:25:28,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 13:25:58] 2026-01-15 04:25:28,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 13:25:58] 2026-01-15 04:25:28,798 | INFO     | all data control threads have been joined
[2026-01-15 13:25:58] 2026-01-15 04:25:29,184 | INFO     | all job control threads have been joined
[2026-01-15 13:25:58] 2026-01-15 04:25:29,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 13:25:58] 2026-01-15 04:25:29,363 | INFO     | aborting loop
[2026-01-15 13:25:58] 2026-01-15 04:25:29,431 | INFO     | [job] retrieve thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:29,431 | INFO     | [job] queue monitor thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:29,458 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:29,567 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:29,574 | INFO     | all payload control threads have been joined
[2026-01-15 13:25:58] 2026-01-15 04:25:29,575 | INFO     | [job] validate thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:29,575 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:29,598 | INFO     | [payload] failed_post thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:29,803 | INFO     | [data] control thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:30,066 | INFO     | [data] copytool_in thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:30,173 | INFO     | [payload] validate_post thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:30,189 | INFO     | [job] control thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:30,368 | INFO     | [job] job monitor thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:30,431 | INFO     | [data] copytool_out thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:30,577 | INFO     | [payload] control thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:30,822 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:32,432 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 13:25:58] 2026-01-15 04:25:41,575 | INFO     | [monitor] cgroup control has ended
[2026-01-15 13:25:58] 2026-01-15 04:25:42,987 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140694962145088)>', '<ExcThread(monitor, started 140694597396224)>']
[2026-01-15 13:25:58] 2026-01-15 04:25:47,994 | INFO     | all workflow threads have been joined
[2026-01-15 13:25:58] 2026-01-15 04:25:47,994 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 13:25:58] 2026-01-15 04:25:47,994 | INFO     | traces error code: 0
[2026-01-15 13:25:58] 2026-01-15 04:25:47,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 13:25:58] 2026-01-15 04:25:58,830 | INFO     | PID=650198 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 13:25:58] 2026-01-15 04:25:58,831 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 13:25:58] 2026-01-15 04:25:58,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 13:25:58] 2026-01-15 04:25:58,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 13:25:58] 2026-01-15 04:25:58,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 13:25:58] 2026-01-15 04:25:58,831 | INFO     | [monitor] control thread has ended
[2026-01-15 13:25:58] 2026-01-15 04:25:58,888 [wrapper] ==== pilot stdout END ====
[2026-01-15 13:25:58] 2026-01-15 04:25:58,890 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 13:25:58] 2026-01-15 04:25:58,892 [wrapper] pilotpid: 650198
[2026-01-15 13:25:58] 2026-01-15 04:25:58,894 [wrapper] Pilot exit status: 0
[2026-01-15 13:25:58] 2026-01-15 04:25:58,900 [wrapper] pandaids: 6969630454
[2026-01-15 13:25:58] 2026-01-15 04:25:58,911 [wrapper] cleanup supervisor_pilot  665883 650199
[2026-01-15 13:25:58] 2026-01-15 04:25:58,913 [wrapper] Test setup, not cleaning
[2026-01-15 13:25:58] 2026-01-15 04:25:58,915 [wrapper] apfmon messages muted
[2026-01-15 13:25:58] 2026-01-15 04:25:58,916 [wrapper] ==== wrapper stdout END ====
[2026-01-15 13:25:58] 2026-01-15 04:25:58,918 [wrapper] ==== wrapper stderr END ====
[2026-01-15 13:25:58]  *** Error codes and diagnostics ***
[2026-01-15 13:25:58]     "exeErrorCode": 0,
[2026-01-15 13:25:58]     "exeErrorDiag": "",
[2026-01-15 13:25:58]     "pilotErrorCode": 0,
[2026-01-15 13:25:58]     "pilotErrorDiag": "",
[2026-01-15 13:25:58]  *** Listing of results directory ***
[2026-01-15 13:25:58] total 720480
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc    579449 Jan 15 05:15 pilot3.tar.gz
[2026-01-15 13:25:58] -rwx------. 1 boinc boinc     36322 Jan 15 05:18 runpilot2-wrapper.sh
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc      5112 Jan 15 05:22 queuedata.json
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc       100 Jan 15 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 13:25:58] -rwxr-xr-x. 1 boinc boinc      7986 Jan 15 12:11 run_atlas
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc       105 Jan 15 12:11 job.xml
[2026-01-15 13:25:58] -rw-r--r--. 2 boinc boinc     15847 Jan 15 12:11 start_atlas.sh
[2026-01-15 13:25:58] drwxrwx--x. 2 boinc boinc        68 Jan 15 12:11 shared
[2026-01-15 13:25:58] -rw-r--r--. 2 boinc boinc    592403 Jan 15 12:11 input.tar.gz
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc      9407 Jan 15 12:11 init_data.xml
[2026-01-15 13:25:58] -rw-r--r--. 2 boinc boinc 588105215 Jan 15 12:11 EVNT.32794306._001327.pool.root.1
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc         0 Jan 15 12:11 boinc_lockfile
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc      2509 Jan 15 12:11 pandaJob.out
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc    999480 Jan 15 12:11 agis_schedconf.cvmfs.json
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc   1516246 Jan 15 12:11 agis_ddmendpoints.agis.ALL.json
[2026-01-15 13:25:58] drwx------. 5 boinc boinc      4096 Jan 15 12:11 pilot3
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc 143952856 Jan 15 13:23 HITS.48215263._033202.pool.root.1
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc       530 Jan 15 13:23 boinc_task_state.xml
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc      1014 Jan 15 13:24 memory_monitor_summary.json
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc    254472 Jan 15 13:24 log.48215263._033202.job.log.tgz.1
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc      7760 Jan 15 13:25 heartbeat.json
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc      8192 Jan 15 13:25 boinc_mmap_file
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc        27 Jan 15 13:25 wrapper_checkpoint.txt
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc        95 Jan 15 13:25 pilot_heartbeat.json
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc       746 Jan 15 13:25 pilotlog.txt
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc    644411 Jan 15 13:25 log.48215263._033202.job.log.1
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc       357 Jan 15 13:25 output.list
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc       620 Jan 15 13:25 runtime_log
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc    921600 Jan 15 13:25 result.tar.gz
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc       643 Jan 15 13:25 XaeLDmbVM08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDXmKDmoLJyVo.diag
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc      8775 Jan 15 13:25 runtime_log.err
[2026-01-15 13:25:58] -rw-r--r--. 1 boinc boinc     22158 Jan 15 13:25 stderr.txt
[2026-01-15 13:25:58] HITS file was successfully produced:
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc 143952856 Jan 15 13:23 shared/HITS.pool.root.1
[2026-01-15 13:25:58]  *** Contents of shared directory: ***
[2026-01-15 13:25:58] total 716400
[2026-01-15 13:25:58] -rw-r--r--. 2 boinc boinc     15847 Jan 15 12:11 start_atlas.sh
[2026-01-15 13:25:58] -rw-r--r--. 2 boinc boinc    592403 Jan 15 12:11 input.tar.gz
[2026-01-15 13:25:58] -rw-r--r--. 2 boinc boinc 588105215 Jan 15 12:11 ATLAS.root_0
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc 143952856 Jan 15 13:23 HITS.pool.root.1
[2026-01-15 13:25:58] -rw-------. 1 boinc boinc    921600 Jan 15 13:25 result.tar.gz
13:26:00 (646522): run_atlas exited; CPU time 11904.254109
13:26:00 (646522): called boinc_finish(0)

</stderr_txt>
]]>

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