Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
23:36:47 (209614): wrapper (7.7.26015): starting
23:36:47 (209614): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 23:36:47] Arguments: --nthreads 12
[2026-01-14 23:36:47] Threads: 12
[2026-01-14 23:36:47] Checking for CVMFS
[2026-01-14 23:36:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 23:36:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 23:36:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 23:36:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 23:36:47] 2.13.3.0 2122 107 49992 155149 1 188 3139498 4096000 854 130560 0 587298 99.996 5603 721 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-14 23:36:47] CVMFS is ok
[2026-01-14 23:36:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 23:36:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 23:36:47] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-14 23:36:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-14 23:36:47] Further information can be found at the LHC@home message board.
[2026-01-14 23:36:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 23:36:47] Checking for apptainer binary...
[2026-01-14 23:36:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 23:36:47] Running /usr/bin/apptainer --version
[2026-01-14 23:36:47] apptainer version 1.4.5
[2026-01-14 23:36:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 23:36:47] test-run
[2026-01-14 23:36:47] apptainer works
[2026-01-14 23:36:47] Set ATHENA_PROC_NUMBER=12
[2026-01-14 23:36:47] Set ATHENA_CORE_NUMBER=12
[2026-01-14 23:36:47] Starting ATLAS job with PandaID=6969448572
[2026-01-14 23:36:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 23:58:01]  *** The last 200 lines of the pilot log: ***
[2026-01-14 23:58:01]  lfn=log.48215263._021757.job.log.tgz.1
[2026-01-14 23:58:01]  mtime=0
[2026-01-14 23:58:01]  protocol_id=None
[2026-01-14 23:58:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 23:58:01]  replicas=None
[2026-01-14 23:58:01]  scope=mc23_13p6TeV
[2026-01-14 23:58:01]  status=None
[2026-01-14 23:58:01]  status_code=0
[2026-01-14 23:58:01]  storage_token=
[2026-01-14 23:58:01]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6969448572/log.48215263._021757.job.log.tgz.1
[2026-01-14 23:58:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/b0/log.48215263._021757.job.log.tgz.1
[2026-01-14 23:58:01]  workdir=None
[2026-01-14 23:58:01] ]
[2026-01-14 23:58:01] 2026-01-14 23:57:09,980 | INFO     | transferring file log.48215263._021757.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6969448572/log.48215263._021757.job.log.tgz.1 to /var/lib/boinc
[2026-01-14 23:58:01] 2026-01-14 23:57:09,980 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6969448572/log.48215263._021757.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.482152
[2026-01-14 23:58:01] 2026-01-14 23:57:09,987 | INFO     | adding to output.list: log.48215263._021757.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/b0/log.48215263._021757.job.log.tg
[2026-01-14 23:58:01] 2026-01-14 23:57:09,987 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 23:58:01] 2026-01-14 23:57:09,987 | INFO     | summary of transferred files:
[2026-01-14 23:58:01] 2026-01-14 23:57:09,987 | INFO     |  -- lfn=log.48215263._021757.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 23:58:01] 2026-01-14 23:57:09,987 | INFO     | stage-out finished correctly
[2026-01-14 23:58:01] 2026-01-14 23:57:10,472 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 23:58:01] 2026-01-14 23:57:10,498 | INFO     | time since job start (1218s) is within the limit (349056.0s)
[2026-01-14 23:58:01] 2026-01-14 23:57:11,296 | WARNING  | process 220133 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 23:58:01] 2026-01-14 23:57:11,296 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6969448572/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 23:58:01] 2026-01-14 23:57:11,311 | INFO     | number of running child processes to parent process 220133: 1
[2026-01-14 23:58:01] 2026-01-14 23:57:11,311 | INFO     | maximum number of monitored processes: 6
[2026-01-14 23:58:01] 2026-01-14 23:57:12,488 | INFO     | job 6969448572 has state=finished
[2026-01-14 23:58:01] 2026-01-14 23:57:12,488 | INFO     | preparing for final server update for job 6969448572 in state='finished'
[2026-01-14 23:58:01] 2026-01-14 23:57:12,488 | INFO     | this job has now completed (state=finished)
[2026-01-14 23:58:01] 2026-01-14 23:57:12,488 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 23:58:01] 2026-01-14 23:57:12,488 | INFO     | log transfer has been attempted: DONE
[2026-01-14 23:58:01] 2026-01-14 23:57:12,488 | INFO     | job 6969448572 has finished - writing final server update
[2026-01-14 23:58:01] 2026-01-14 23:57:12,488 | INFO     | total number of processed events: 400 (read)
[2026-01-14 23:58:01] 2026-01-14 23:57:12,491 | INFO     | executing command: lscpu
[2026-01-14 23:58:01] 2026-01-14 23:57:12,502 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 23:58:01] 2026-01-14 23:57:12,503 | INFO     | time since job start (1220s) is within the limit (349056.0s)
[2026-01-14 23:58:01] 2026-01-14 23:57:13,639 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 23:58:01] 2026-01-14 23:57:13,639 | INFO     | found 32 cores (32 cores per socket, 1 socket) , CPU MHz: 4291.948000000003
[2026-01-14 23:58:01] 2026-01-14 23:57:13,640 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6969448572/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 23:58:01] 2026-01-14 23:57:13,640 | INFO     | extracted standard info from prmon json
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | fitting pss+swap vs Time
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | sum of square deviations: 677222.0
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | sum of deviations: 89631204.0
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | mean x: 1768434499.0
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | mean y: 2936847.769230769
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | intersect: -234051646937.9123
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | chi2: 0.001055557892984303
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | current memory leak: 132.35 B/s (using 13 data points, chi2=0.00)
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | could have reported an average CPU frequency of 4291 MHz (4 samples)
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | ..............................
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | . Timing measurements:
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | . get job = 0 s
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | . initial setup = 2 s
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | . payload setup = 1 s
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | . stage-in = 0 s
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | . payload execution = 1199 s
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | . stage-out = 0 s
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | . log creation = 0 s
[2026-01-14 23:58:01] 2026-01-14 23:57:13,641 | INFO     | ..............................
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | 
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | job summary report
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | --------------------------------------------------
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | PanDA job id: 6969448572
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | task id: 48215263
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | errors: (none)
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | pilot state: finished 
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | transexitcode: 0
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | exeerrorcode: 0
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | exeerrordiag: 
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | exitcode: 0
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | exitmsg: OK
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | cpuconsumptiontime: 10543 s
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | nevents: 400
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | neventsw: 0
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | pid: 220133
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | pgrp: 220133
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | corecount: 12
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | event service: False
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | sizes: {0: 2283954, 1: 2284216, 11: 2284244, 1204: 2308869, 1205: 2317936, 1206: 2317936, 1209: 2318258}
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | --------------------------------------------------
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | 
[2026-01-14 23:58:01] 2026-01-14 23:57:14,056 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | job 6969448572 has completed (purged errors)
[2026-01-14 23:58:01] 2026-01-14 23:57:14,066 | INFO     | overall cleanup function is called
[2026-01-14 23:58:01] 2026-01-14 23:57:15,072 | INFO     | --- collectZombieJob: --- 10, [220133]
[2026-01-14 23:58:01] 2026-01-14 23:57:15,072 | INFO     | zombie collector waiting for pid 220133
[2026-01-14 23:58:01] 2026-01-14 23:57:15,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 23:58:01] 2026-01-14 23:57:15,072 | INFO     | collected zombie processes
[2026-01-14 23:58:01] 2026-01-14 23:57:15,072 | INFO     | will attempt to kill all subprocesses of pid=220133
[2026-01-14 23:58:01] 2026-01-14 23:57:15,090 | INFO     | process IDs to be killed: [220133] (in reverse order)
[2026-01-14 23:58:01] 2026-01-14 23:57:15,104 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 23:58:01] 2026-01-14 23:57:15,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 23:58:01] 2026-01-14 23:57:15,105 | INFO     | did not find any defunct processes belonging to 220133
[2026-01-14 23:58:01] 2026-01-14 23:57:15,106 | INFO     | did not find any defunct processes belonging to 220133
[2026-01-14 23:58:01] 2026-01-14 23:57:15,106 | INFO     | ready for new job
[2026-01-14 23:58:01] 2026-01-14 23:57:15,106 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 23:58:01] 2026-01-14 23:57:15,106 | INFO     | ***************************************
[2026-01-14 23:58:01] 2026-01-14 23:57:15,106 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 23:58:01] 2026-01-14 23:57:15,106 | INFO     | ***************************************
[2026-01-14 23:58:01] 2026-01-14 23:57:15,106 | INFO     | 
[2026-01-14 23:58:01] 2026-01-14 23:57:15,106 | INFO     | pilot is running in a VM
[2026-01-14 23:58:01] 2026-01-14 23:57:15,106 | INFO     | architecture information:
[2026-01-14 23:58:01] 2026-01-14 23:57:15,107 | INFO     | executing command: cat /etc/os-release
[2026-01-14 23:58:01] 2026-01-14 23:57:15,113 | INFO     | cat /etc/os-release:
[2026-01-14 23:58:01] NAME="CentOS Linux"
[2026-01-14 23:58:01] VERSION="7 (Core)"
[2026-01-14 23:58:01] ID="centos"
[2026-01-14 23:58:01] ID_LIKE="rhel fedora"
[2026-01-14 23:58:01] VERSION_ID="7"
[2026-01-14 23:58:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 23:58:01] ANSI_COLOR="0;31"
[2026-01-14 23:58:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 23:58:01] HOME_URL="https://www.centos.org/"
[2026-01-14 23:58:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 23:58:01] 
[2026-01-14 23:58:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 23:58:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 23:58:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 23:58:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 23:58:01] 
[2026-01-14 23:58:01] 2026-01-14 23:57:15,113 | INFO     | ***************************************
[2026-01-14 23:58:01] 2026-01-14 23:57:15,615 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-14 23:58:01] 2026-01-14 23:57:15,621 | INFO     | sufficient remaining disk space (67619520512 B)
[2026-01-14 23:58:01] 2026-01-14 23:57:15,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 23:58:01] 2026-01-14 23:57:15,621 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 23:58:01] 2026-01-14 23:57:15,621 | INFO     | update_server=False
[2026-01-14 23:58:01] 2026-01-14 23:57:15,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 23:58:01] 2026-01-14 23:57:15,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 23:58:01] 2026-01-14 23:57:15,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 23:58:01] 2026-01-14 23:57:15,621 | INFO     | aborting loop
[2026-01-14 23:58:01] 2026-01-14 23:57:15,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 23:58:01] 2026-01-14 23:57:15,776 | INFO     | all data control threads have been joined
[2026-01-14 23:58:01] 2026-01-14 23:57:15,907 | INFO     | all job control threads have been joined
[2026-01-14 23:58:01] 2026-01-14 23:57:16,271 | INFO     | all payload control threads have been joined
[2026-01-14 23:58:01] 2026-01-14 23:57:16,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 23:58:01] 2026-01-14 23:57:16,626 | INFO     | [job] retrieve thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:16,626 | INFO     | [job] job monitor thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:16,627 | INFO     | [job] queue monitor thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:16,671 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:16,684 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:16,780 | INFO     | [data] control thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:16,817 | INFO     | [payload] validate_post thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:16,912 | INFO     | [job] control thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:17,276 | INFO     | [payload] control thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:17,626 | INFO     | [data] copytool_out thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:17,724 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:17,829 | INFO     | [data] copytool_in thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:17,878 | INFO     | [payload] failed_post thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:18,062 | INFO     | [job] validate thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:20,506 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:26,497 | INFO     | job.realtimelogging is not enabled
[2026-01-14 23:58:01] 2026-01-14 23:57:27,502 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 23:58:01] 2026-01-14 23:57:45,592 | INFO     | PID=213473 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 23:58:01] 2026-01-14 23:57:45,592 | INFO     | .. there are 2 such processes running
[2026-01-14 23:58:01] 2026-01-14 23:57:45,592 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 23:58:01] 2026-01-14 23:57:45,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 23:58:01] 2026-01-14 23:57:45,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 23:58:01] 2026-01-14 23:57:54,067 | INFO     | [monitor] cgroup control has ended
[2026-01-14 23:58:01] 2026-01-14 23:57:55,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130291248920384)>', '<ExcThread(monitor, started 130290752141056)>']
[2026-01-14 23:58:01] 2026-01-14 23:57:56,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 23:58:01] 2026-01-14 23:57:56,648 | INFO     | [monitor] control thread has ended
[2026-01-14 23:58:01] 2026-01-14 23:58:00,937 | INFO     | all workflow threads have been joined
[2026-01-14 23:58:01] 2026-01-14 23:58:00,937 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 23:58:01] 2026-01-14 23:58:00,937 | INFO     | traces error code: 0
[2026-01-14 23:58:01] 2026-01-14 23:58:00,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 23:58:01] 2026-01-14 23:58:00,972 [wrapper] ==== pilot stdout END ====
[2026-01-14 23:58:01] 2026-01-14 23:58:00,974 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 23:58:01] 2026-01-14 23:58:00,974 [wrapper] pilotpid: 213473
[2026-01-14 23:58:01] 2026-01-14 23:58:00,975 [wrapper] Pilot exit status: 0
[2026-01-14 23:58:01] 2026-01-14 23:58:00,980 [wrapper] pandaids: 6969448572
[2026-01-14 23:58:01] 2026-01-14 23:58:00,989 [wrapper] cleanup supervisor_pilot  226903 213474
[2026-01-14 23:58:01] 2026-01-14 23:58:00,990 [wrapper] Test setup, not cleaning
[2026-01-14 23:58:01] 2026-01-14 23:58:00,991 [wrapper] apfmon messages muted
[2026-01-14 23:58:01] 2026-01-14 23:58:00,992 [wrapper] ==== wrapper stdout END ====
[2026-01-14 23:58:01] 2026-01-14 23:58:00,993 [wrapper] ==== wrapper stderr END ====
[2026-01-14 23:58:01]  *** Error codes and diagnostics ***
[2026-01-14 23:58:01]     "exeErrorCode": 0,
[2026-01-14 23:58:01]     "exeErrorDiag": "",
[2026-01-14 23:58:01]     "pilotErrorCode": 0,
[2026-01-14 23:58:01]     "pilotErrorDiag": "",
[2026-01-14 23:58:01]  *** Listing of results directory ***
[2026-01-14 23:58:01] total 739460
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc    579449 Jan 14 11:27 pilot3.tar.gz
[2026-01-14 23:58:01] -rwx------ 1 boinc boinc     36322 Jan 14 11:28 runpilot2-wrapper.sh
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc      5112 Jan 14 11:29 queuedata.json
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc       100 Jan 14 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 23:58:01] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 23:36 run_atlas
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc       105 Jan 14 23:36 job.xml
[2026-01-14 23:58:01] -rw-r--r-- 2 boinc boinc     15847 Jan 14 23:36 start_atlas.sh
[2026-01-14 23:58:01] drwxrwx--x 2 boinc boinc      4096 Jan 14 23:36 shared
[2026-01-14 23:58:01] -rw-r--r-- 2 boinc boinc    592399 Jan 14 23:36 input.tar.gz
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc      6941 Jan 14 23:36 init_data.xml
[2026-01-14 23:58:01] -rw-r--r-- 2 boinc boinc 599081777 Jan 14 23:36 EVNT.32794306._000872.pool.root.1
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc         0 Jan 14 23:36 boinc_lockfile
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc      2506 Jan 14 23:36 pandaJob.out
[2026-01-14 23:58:01] -rw------- 1 boinc boinc    999488 Jan 14 23:36 agis_schedconf.cvmfs.json
[2026-01-14 23:58:01] -rw------- 1 boinc boinc   1516246 Jan 14 23:36 agis_ddmendpoints.agis.ALL.json
[2026-01-14 23:58:01] drwx------ 5 boinc boinc      4096 Jan 14 23:36 pilot3
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc       531 Jan 14 23:56 boinc_task_state.xml
[2026-01-14 23:58:01] -rw------- 1 boinc boinc 153108096 Jan 14 23:56 HITS.48215263._021757.pool.root.1
[2026-01-14 23:58:01] -rw------- 1 boinc boinc        95 Jan 14 23:56 pilot_heartbeat.json
[2026-01-14 23:58:01] -rw------- 1 boinc boinc      1021 Jan 14 23:57 memory_monitor_summary.json
[2026-01-14 23:58:01] -rw------- 1 boinc boinc    321317 Jan 14 23:57 log.48215263._021757.job.log.tgz.1
[2026-01-14 23:58:01] -rw------- 1 boinc boinc      7734 Jan 14 23:57 heartbeat.json
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc      8192 Jan 14 23:58 boinc_mmap_file
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc        27 Jan 14 23:58 wrapper_checkpoint.txt
[2026-01-14 23:58:01] -rw------- 1 boinc boinc      4963 Jan 14 23:58 pilotlog.txt
[2026-01-14 23:58:01] -rw------- 1 boinc boinc    224194 Jan 14 23:58 log.48215263._021757.job.log.1
[2026-01-14 23:58:01] -rw------- 1 boinc boinc       357 Jan 14 23:58 output.list
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc       620 Jan 14 23:58 runtime_log
[2026-01-14 23:58:01] -rw------- 1 boinc boinc    563200 Jan 14 23:58 result.tar.gz
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc      8890 Jan 14 23:58 runtime_log.err
[2026-01-14 23:58:01] -rw------- 1 boinc boinc       640 Jan 14 23:58 a6MODmJEE08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeskKDmVSU1Km.diag
[2026-01-14 23:58:01] -rw-r--r-- 1 boinc boinc     21820 Jan 14 23:58 stderr.txt
[2026-01-14 23:58:01] HITS file was successfully produced:
[2026-01-14 23:58:01] -rw------- 1 boinc boinc 153108096 Jan 14 23:56 shared/HITS.pool.root.1
[2026-01-14 23:58:01]  *** Contents of shared directory: ***
[2026-01-14 23:58:01] total 735720
[2026-01-14 23:58:01] -rw-r--r-- 2 boinc boinc     15847 Jan 14 23:36 start_atlas.sh
[2026-01-14 23:58:01] -rw-r--r-- 2 boinc boinc    592399 Jan 14 23:36 input.tar.gz
[2026-01-14 23:58:01] -rw-r--r-- 2 boinc boinc 599081777 Jan 14 23:36 ATLAS.root_0
[2026-01-14 23:58:01] -rw------- 1 boinc boinc 153108096 Jan 14 23:56 HITS.pool.root.1
[2026-01-14 23:58:01] -rw------- 1 boinc boinc    563200 Jan 14 23:58 result.tar.gz
23:58:02 (209614): run_atlas exited; CPU time 10544.125638
23:58:02 (209614): called boinc_finish(0)

</stderr_txt>
]]>

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