Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:16:55 (3409201): wrapper (7.7.26015): starting
18:16:55 (3409201): wrapper: running run_atlas (--nthreads 10)
[2026-01-14 18:16:55] Arguments: --nthreads 10
[2026-01-14 18:16:55] Threads: 10
[2026-01-14 18:16:55] Checking for CVMFS
[2026-01-14 18:16:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 18:16:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 18:16:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 18:16:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 18:16:57] 2.13.3.0 11160 101258 391120 155148 0 75 26668857 32935936 20037 16776704 0 291814105 99.517 441634402 40250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 18:16:57] CVMFS is ok
[2026-01-14 18:16:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 18:16:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 18:16:57] Further information can be found at the LHC@home message board.
[2026-01-14 18:16:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 18:16:57] Checking for apptainer binary...
[2026-01-14 18:16:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 18:16:57] Running /usr/bin/apptainer --version
[2026-01-14 18:16:58] apptainer version 1.4.5-2.el9
[2026-01-14 18:16:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 18:16:59] c6-2-29-2.aglt2.org
[2026-01-14 18:16:59] apptainer works
[2026-01-14 18:16:59] Set ATHENA_PROC_NUMBER=10
[2026-01-14 18:16:59] Set ATHENA_CORE_NUMBER=10
[2026-01-14 18:16:59] Starting ATLAS job with PandaID=6969359130
[2026-01-14 18:16:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 19:00:49]  *** The last 200 lines of the pilot log: ***
[2026-01-14 19:00:49] 2026-01-14 23:59:57,830 | WARNING  | process 3423367 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 19:00:49] 2026-01-14 23:59:57,833 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969359130/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 19:00:49] 2026-01-14 23:59:57,860 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 19:00:49] 2026-01-14 23:59:58,956 | INFO     | PID=3414114 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-14 19:00:49] 2026-01-14 23:59:58,956 | INFO     | .. there are 23 such processes running
[2026-01-14 19:00:49] 2026-01-14 23:59:59,021 | INFO     | number of running child processes to parent process 3423367: 1
[2026-01-14 19:00:49] 2026-01-14 23:59:59,021 | INFO     | maximum number of monitored processes: 15
[2026-01-14 19:00:49] 2026-01-14 23:59:59,958 | INFO     | time since job start (2557s) is within the limit (349056.0s)
[2026-01-14 19:00:49] 2026-01-15 00:00:00,924 | INFO     | job 6969359130 has state=finished
[2026-01-14 19:00:49] 2026-01-15 00:00:00,924 | INFO     | preparing for final server update for job 6969359130 in state='finished'
[2026-01-14 19:00:49] 2026-01-15 00:00:00,924 | INFO     | this job has now completed (state=finished)
[2026-01-14 19:00:49] 2026-01-15 00:00:00,924 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 19:00:49] 2026-01-15 00:00:00,925 | INFO     | log transfer has been attempted: DONE
[2026-01-14 19:00:49] 2026-01-15 00:00:00,925 | INFO     | job 6969359130 has finished - writing final server update
[2026-01-14 19:00:49] 2026-01-15 00:00:00,925 | INFO     | total number of processed events: 50 (read)
[2026-01-14 19:00:49] 2026-01-15 00:00:00,930 | INFO     | executing command: lscpu
[2026-01-14 19:00:49] 2026-01-15 00:00:01,015 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 19:00:49] 2026-01-15 00:00:01,589 | INFO     | monitor loop #190: job 0:6969359130 is in state 'finished'
[2026-01-14 19:00:49] 2026-01-15 00:00:01,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:00:49] 2026-01-15 00:00:01,966 | INFO     | time since job start (2559s) is within the limit (349056.0s)
[2026-01-14 19:00:49] 2026-01-15 00:00:03,973 | INFO     | time since job start (2561s) is within the limit (349056.0s)
[2026-01-14 19:00:49] 2026-01-15 00:00:04,104 | INFO     | monitor loop #191: job 0:6969359130 is in state 'finished'
[2026-01-14 19:00:49] 2026-01-15 00:00:04,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:00:49] 2026-01-15 00:00:05,980 | INFO     | time since job start (2563s) is within the limit (349056.0s)
[2026-01-14 19:00:49] 2026-01-15 00:00:06,625 | INFO     | monitor loop #192: job 0:6969359130 is in state 'finished'
[2026-01-14 19:00:49] 2026-01-15 00:00:06,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:00:49] 2026-01-15 00:00:07,986 | INFO     | time since job start (2565s) is within the limit (349056.0s)
[2026-01-14 19:00:49] 2026-01-15 00:00:09,130 | INFO     | monitor loop #193: job 0:6969359130 is in state 'finished'
[2026-01-14 19:00:49] 2026-01-15 00:00:09,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:00:49] 2026-01-15 00:00:09,996 | INFO     | time since job start (2567s) is within the limit (349056.0s)
[2026-01-14 19:00:49] 2026-01-15 00:00:11,635 | INFO     | monitor loop #194: job 0:6969359130 is in state 'finished'
[2026-01-14 19:00:49] 2026-01-15 00:00:11,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:00:49] 2026-01-15 00:00:12,003 | INFO     | time since job start (2570s) is within the limit (349056.0s)
[2026-01-14 19:00:49] 2026-01-15 00:00:14,011 | INFO     | time since job start (2572s) is within the limit (349056.0s)
[2026-01-14 19:00:49] 2026-01-15 00:00:14,152 | INFO     | monitor loop #195: job 0:6969359130 is in state 'finished'
[2026-01-14 19:00:49] 2026-01-15 00:00:14,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:00:49] 2026-01-15 00:00:16,022 | INFO     | time since job start (2574s) is within the limit (349056.0s)
[2026-01-14 19:00:49] 2026-01-15 00:00:16,657 | INFO     | monitor loop #196: job 0:6969359130 is in state 'finished'
[2026-01-14 19:00:49] 2026-01-15 00:00:16,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:00:49] 2026-01-15 00:00:16,816 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 19:00:49] 2026-01-15 00:00:16,863 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3121.351589285715
[2026-01-14 19:00:49] 2026-01-15 00:00:16,921 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969359130/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 19:00:49] 2026-01-15 00:00:16,928 | INFO     | extracted standard info from prmon json
[2026-01-14 19:00:49] 2026-01-15 00:00:16,928 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 19:00:49] 2026-01-15 00:00:16,929 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 19:00:49] 2026-01-15 00:00:16,930 | INFO     | fitting pss+swap vs Time
[2026-01-14 19:00:49] 2026-01-15 00:00:16,930 | INFO     | sum of square deviations: 12168335.558823522
[2026-01-14 19:00:49] 2026-01-15 00:00:16,930 | INFO     | sum of deviations: 2083918172.7941167
[2026-01-14 19:00:49] 2026-01-15 00:00:16,931 | INFO     | mean x: 1768434018.2058823
[2026-01-14 19:00:49] 2026-01-15 00:00:16,931 | INFO     | mean y: 2797352.029411765
[2026-01-14 19:00:49] 2026-01-15 00:00:16,931 | INFO     | intersect: -302854710982.7313
[2026-01-14 19:00:49] 2026-01-15 00:00:16,931 | INFO     | chi2: 0.7967143350721874
[2026-01-14 19:00:49] 2026-01-15 00:00:16,931 | INFO     | current memory leak: 171.26 B/s (using 34 data points, chi2=0.80)
[2026-01-14 19:00:49] 2026-01-15 00:00:16,931 | INFO     | could have reported an average CPU frequency of 3147 MHz (5 samples)
[2026-01-14 19:00:49] 2026-01-15 00:00:16,931 | INFO     | ..............................
[2026-01-14 19:00:49] 2026-01-15 00:00:16,932 | INFO     | . Timing measurements:
[2026-01-14 19:00:49] 2026-01-15 00:00:16,953 | INFO     | . get job = 0 s
[2026-01-14 19:00:49] 2026-01-15 00:00:16,953 | INFO     | . initial setup = 3 s
[2026-01-14 19:00:49] 2026-01-15 00:00:16,953 | INFO     | . payload setup = 18 s
[2026-01-14 19:00:49] 2026-01-15 00:00:16,953 | INFO     | . stage-in = 0 s
[2026-01-14 19:00:49] 2026-01-15 00:00:16,953 | INFO     | . payload execution = 2495 s
[2026-01-14 19:00:49] 2026-01-15 00:00:16,953 | INFO     | . stage-out = 1 s
[2026-01-14 19:00:49] 2026-01-15 00:00:16,953 | INFO     | . log creation = 0 s
[2026-01-14 19:00:49] 2026-01-15 00:00:16,953 | INFO     | ..............................
[2026-01-14 19:00:49] 2026-01-15 00:00:17,571 | INFO     | 
[2026-01-14 19:00:49] 2026-01-15 00:00:17,572 | INFO     | job summary report
[2026-01-14 19:00:49] 2026-01-15 00:00:17,572 | INFO     | --------------------------------------------------
[2026-01-14 19:00:49] 2026-01-15 00:00:17,572 | INFO     | PanDA job id: 6969359130
[2026-01-14 19:00:49] 2026-01-15 00:00:17,572 | INFO     | task id: 47962010
[2026-01-14 19:00:49] 2026-01-15 00:00:17,572 | INFO     | errors: (none)
[2026-01-14 19:00:49] 2026-01-15 00:00:17,572 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 19:00:49] 2026-01-15 00:00:17,572 | INFO     | pilot state: finished 
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | transexitcode: 0
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | exeerrorcode: 0
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | exeerrordiag: 
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | exitcode: 0
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | exitmsg: OK
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | cpuconsumptiontime: 13907 s
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | nevents: 50
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | neventsw: 0
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | pid: 3423367
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | pgrp: 3423367
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | corecount: 10
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | event service: False
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | sizes: {0: 2283742, 1: 2284598, 12: 2284888, 23: 2284888, 2518: 2310750, 2521: 2319744, 2522: 2319928, 2541: 2320206}
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | --------------------------------------------------
[2026-01-14 19:00:49] 2026-01-15 00:00:17,573 | INFO     | 
[2026-01-14 19:00:49] 2026-01-15 00:00:17,574 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-14 19:00:49] 2026-01-15 00:00:17,641 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,643 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 19:00:49] 2026-01-15 00:00:17,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,643 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 19:00:49] 2026-01-15 00:00:17,643 | INFO     | job 6969359130 has completed (purged errors)
[2026-01-14 19:00:49] 2026-01-15 00:00:17,643 | INFO     | overall cleanup function is called
[2026-01-14 19:00:49] 2026-01-15 00:00:18,767 | INFO     | --- collectZombieJob: --- 10, [3423367]
[2026-01-14 19:00:49] 2026-01-15 00:00:18,767 | INFO     | zombie collector waiting for pid 3423367
[2026-01-14 19:00:49] 2026-01-15 00:00:18,767 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 19:00:49] 2026-01-15 00:00:18,767 | INFO     | collected zombie processes
[2026-01-14 19:00:49] 2026-01-15 00:00:18,767 | INFO     | will attempt to kill all subprocesses of pid=3423367
[2026-01-14 19:00:49] 2026-01-15 00:00:19,247 | INFO     | process IDs to be killed: [3423367] (in reverse order)
[2026-01-14 19:00:49] 2026-01-15 00:00:19,402 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 19:00:49] 2026-01-15 00:00:19,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 19:00:49] 2026-01-15 00:00:19,416 | INFO     | did not find any defunct processes belonging to 3423367
[2026-01-14 19:00:49] 2026-01-15 00:00:19,429 | INFO     | did not find any defunct processes belonging to 3423367
[2026-01-14 19:00:49] 2026-01-15 00:00:19,429 | INFO     | ready for new job
[2026-01-14 19:00:49] 2026-01-15 00:00:19,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 19:00:49] 2026-01-15 00:00:19,433 | INFO     | ***************************************
[2026-01-14 19:00:49] 2026-01-15 00:00:19,433 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 19:00:49] 2026-01-15 00:00:19,433 | INFO     | ***************************************
[2026-01-14 19:00:49] 2026-01-15 00:00:19,433 | INFO     | 
[2026-01-14 19:00:49] 2026-01-15 00:00:19,442 | INFO     | architecture information:
[2026-01-14 19:00:49] 2026-01-15 00:00:19,450 | INFO     | executing command: cat /etc/os-release
[2026-01-14 19:00:49] 2026-01-15 00:00:19,514 | INFO     | cat /etc/os-release:
[2026-01-14 19:00:49] NAME="CentOS Linux"
[2026-01-14 19:00:49] VERSION="7 (Core)"
[2026-01-14 19:00:49] ID="centos"
[2026-01-14 19:00:49] ID_LIKE="rhel fedora"
[2026-01-14 19:00:49] VERSION_ID="7"
[2026-01-14 19:00:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 19:00:49] ANSI_COLOR="0;31"
[2026-01-14 19:00:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 19:00:49] HOME_URL="https://www.centos.org/"
[2026-01-14 19:00:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 19:00:49] 
[2026-01-14 19:00:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 19:00:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 19:00:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 19:00:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 19:00:49] 
[2026-01-14 19:00:49] 2026-01-15 00:00:19,514 | INFO     | ***************************************
[2026-01-14 19:00:49] 2026-01-15 00:00:20,017 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-14 19:00:49] 2026-01-15 00:00:20,038 | INFO     | sufficient remaining disk space (73753690112 B)
[2026-01-14 19:00:49] 2026-01-15 00:00:20,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 19:00:49] 2026-01-15 00:00:20,038 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 19:00:49] 2026-01-15 00:00:20,038 | INFO     | update_server=False
[2026-01-14 19:00:49] 2026-01-15 00:00:20,038 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 19:00:49] 2026-01-15 00:00:20,039 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 19:00:49] 2026-01-15 00:00:20,065 | INFO     | all data control threads have been joined
[2026-01-14 19:00:49] 2026-01-15 00:00:20,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 19:00:49] 2026-01-15 00:00:20,176 | INFO     | aborting loop
[2026-01-14 19:00:49] 2026-01-15 00:00:20,613 | INFO     | all job control threads have been joined
[2026-01-14 19:00:49] 2026-01-15 00:00:20,723 | INFO     | all payload control threads have been joined
[2026-01-14 19:00:49] 2026-01-15 00:00:21,045 | INFO     | [job] retrieve thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:21,071 | INFO     | [data] control thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:21,182 | INFO     | [job] job monitor thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:21,274 | INFO     | [job] validate thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:21,428 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:21,619 | INFO     | [job] control thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:21,729 | INFO     | [payload] control thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:21,731 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:21,872 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:22,045 | INFO     | [data] copytool_out thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:22,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 19:00:49] 2026-01-15 00:00:22,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 19:00:49] 2026-01-15 00:00:22,374 | INFO     | [data] copytool_in thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:22,398 | INFO     | [payload] failed_post thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:22,416 | INFO     | [payload] validate_post thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:23,165 | INFO     | [job] queue monitor thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:26,256 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:26,301 | INFO     | [monitor] cgroup control has ended
[2026-01-14 19:00:49] 2026-01-15 00:00:30,674 | INFO     | job.realtimelogging is not enabled
[2026-01-14 19:00:49] 2026-01-15 00:00:31,680 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 19:00:49] 2026-01-15 00:00:32,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911549318976)>', '<ExcThread(monitor, started 139910824580864)>']
[2026-01-14 19:00:49] 2026-01-15 00:00:37,359 | INFO     | all workflow threads have been joined
[2026-01-14 19:00:49] 2026-01-15 00:00:37,359 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 19:00:49] 2026-01-15 00:00:37,359 | INFO     | traces error code: 0
[2026-01-14 19:00:49] 2026-01-15 00:00:37,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 19:00:49] 2026-01-15 00:00:49,507 | INFO     | PID=3414114 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 19:00:49] 2026-01-15 00:00:49,507 | INFO     | .. there are 23 such processes running
[2026-01-14 19:00:49] 2026-01-15 00:00:49,507 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 19:00:49] 2026-01-15 00:00:49,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 19:00:49] 2026-01-15 00:00:49,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 19:00:49] 2026-01-15 00:00:49,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 19:00:49] 2026-01-15 00:00:49,507 | INFO     | [monitor] control thread has ended
[2026-01-14 19:00:49] 2026-01-15 00:00:49,672 [wrapper] ==== pilot stdout END ====
[2026-01-14 19:00:49] 2026-01-15 00:00:49,675 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 19:00:49] 2026-01-15 00:00:49,677 [wrapper] pilotpid: 3414114
[2026-01-14 19:00:49] 2026-01-15 00:00:49,684 [wrapper] Pilot exit status: 0
[2026-01-14 19:00:49] 2026-01-15 00:00:49,718 [wrapper] pandaids: 6969359130
[2026-01-14 19:00:49] 2026-01-15 00:00:49,803 [wrapper] cleanup supervisor_pilot 3596212 3414115
[2026-01-14 19:00:49] 2026-01-15 00:00:49,817 [wrapper] Test setup, not cleaning
[2026-01-14 19:00:49] 2026-01-15 00:00:49,835 [wrapper] apfmon messages muted
[2026-01-14 19:00:49] 2026-01-15 00:00:49,845 [wrapper] ==== wrapper stdout END ====
[2026-01-14 19:00:49] 2026-01-15 00:00:49,857 [wrapper] ==== wrapper stderr END ====
[2026-01-14 19:00:49]  *** Error codes and diagnostics ***
[2026-01-14 19:00:49]     "exeErrorCode": 0,
[2026-01-14 19:00:49]     "exeErrorDiag": "",
[2026-01-14 19:00:49]     "pilotErrorCode": 0,
[2026-01-14 19:00:49]     "pilotErrorDiag": "",
[2026-01-14 19:00:49]  *** Listing of results directory ***
[2026-01-14 19:00:49] total 438356
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 11:41 pilot3.tar.gz
[2026-01-14 19:00:49] -rwx------. 1 boincer umatlas     36322 Jan 14 11:44 runpilot2-wrapper.sh
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 11:44 queuedata.json
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas       100 Jan 14 18:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 19:00:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 18:16 run_atlas
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas       105 Jan 14 18:16 job.xml
[2026-01-14 19:00:49] -rw-r--r--. 2 boincer umatlas 393083970 Jan 14 18:16 EVNT.47962006._000087.pool.root.1
[2026-01-14 19:00:49] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 18:16 start_atlas.sh
[2026-01-14 19:00:49] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 18:16 shared
[2026-01-14 19:00:49] -rw-r--r--. 2 boincer umatlas    592618 Jan 14 18:16 input.tar.gz
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas         0 Jan 14 18:16 boinc_lockfile
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas      2891 Jan 14 18:16 pandaJob.out
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas        57 Jan 14 18:16 setup.sh.local
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas    999488 Jan 14 18:17 agis_schedconf.cvmfs.json
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas   1516246 Jan 14 18:17 agis_ddmendpoints.agis.ALL.json
[2026-01-14 19:00:49] drwx------. 5 boincer umatlas      4096 Jan 14 18:17 pilot3
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas       530 Jan 14 18:51 boinc_task_state.xml
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas      6842 Jan 14 18:57 init_data.xml
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas  48287260 Jan 14 18:59 HITS.47962010._003430.pool.root.1
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas      1045 Jan 14 18:59 memory_monitor_summary.json
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas   1383390 Jan 14 18:59 log.47962010._003430.job.log.tgz.1
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas        95 Jan 14 19:00 pilot_heartbeat.json
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas      8582 Jan 14 19:00 heartbeat.json
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 19:00 boinc_mmap_file
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas        27 Jan 14 19:00 wrapper_checkpoint.txt
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas       823 Jan 14 19:00 pilotlog.txt
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas    408135 Jan 14 19:00 log.47962010._003430.job.log.1
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas       353 Jan 14 19:00 output.list
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas       620 Jan 14 19:00 runtime_log
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas   1812480 Jan 14 19:00 result.tar.gz
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas      9349 Jan 14 19:00 runtime_log.err
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas       652 Jan 14 19:00 HC0LDm89I08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAurKDmeRMHCn.diag
[2026-01-14 19:00:49] -rw-r--r--. 1 boincer umatlas     22407 Jan 14 19:00 stderr.txt
[2026-01-14 19:00:49] HITS file was successfully produced:
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas 48287260 Jan 14 18:59 shared/HITS.pool.root.1
[2026-01-14 19:00:49]  *** Contents of shared directory: ***
[2026-01-14 19:00:49] total 433396
[2026-01-14 19:00:49] -rw-r--r--. 2 boincer umatlas 393083970 Jan 14 18:16 ATLAS.root_0
[2026-01-14 19:00:49] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 18:16 start_atlas.sh
[2026-01-14 19:00:49] -rw-r--r--. 2 boincer umatlas    592618 Jan 14 18:16 input.tar.gz
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas  48287260 Jan 14 18:59 HITS.pool.root.1
[2026-01-14 19:00:49] -rw-------. 1 boincer umatlas   1812480 Jan 14 19:00 result.tar.gz
19:00:51 (3409201): run_atlas exited; CPU time 13916.463777
19:00:51 (3409201): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN