Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:13:00 (30079): wrapper (7.7.26015): starting
16:13:00 (30079): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 16:13:00] Arguments: --nthreads 12
[2026-01-14 16:13:00] Threads: 12
[2026-01-14 16:13:00] Checking for CVMFS
[2026-01-14 16:13:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 16:13:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 16:13:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 16:13:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 16:13:01] 2.11.2.0 2916 358720 101412 155144 3 57 17956965 20275201 1 130560 1 150831467 99.944 22197994 17029 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 16:13:01] CVMFS is ok
[2026-01-14 16:13:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 16:13:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 16:13:01] Further information can be found at the LHC@home message board.
[2026-01-14 16:13:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 16:13:01] Checking for apptainer binary...
[2026-01-14 16:13:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 16:13:01] Running /usr/bin/apptainer --version
[2026-01-14 16:13:01] apptainer version 1.3.2-1.el7
[2026-01-14 16:13:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 16:13:02] c-205-23.aglt2.org
[2026-01-14 16:13:02] apptainer works
[2026-01-14 16:13:02] Set ATHENA_PROC_NUMBER=12
[2026-01-14 16:13:02] Set ATHENA_CORE_NUMBER=12
[2026-01-14 16:13:02] Starting ATLAS job with PandaID=6969523571
[2026-01-14 16:13:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 17:02:35]  *** The last 200 lines of the pilot log: ***
[2026-01-14 17:02:35]  status_code=0
[2026-01-14 17:02:35]  storage_token=
[2026-01-14 17:02:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969523571/log.48215263._027916.job.log.tgz.1
[2026-01-14 17:02:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/69/log.48215263._027916.job.log.tgz.1
[2026-01-14 17:02:35]  workdir=None
[2026-01-14 17:02:35] ]
[2026-01-14 17:02:35] 2026-01-14 22:01:52,495 | INFO     | transferring file log.48215263._027916.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969523571/log.48215263._027916.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 17:02:35] 2026-01-14 22:01:52,496 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969523571/log.48215263._027916.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._027916.job
[2026-01-14 17:02:35] 2026-01-14 22:01:52,518 | INFO     | adding to output.list: log.48215263._027916.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/69/log.48215263._027916.job.log.tg
[2026-01-14 17:02:35] 2026-01-14 22:01:52,519 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 17:02:35] 2026-01-14 22:01:52,519 | INFO     | summary of transferred files:
[2026-01-14 17:02:35] 2026-01-14 22:01:52,519 | INFO     |  -- lfn=log.48215263._027916.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 17:02:35] 2026-01-14 22:01:52,520 | INFO     | stage-out finished correctly
[2026-01-14 17:02:35] 2026-01-14 22:01:53,525 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 17:02:35] 2026-01-14 22:01:54,085 | INFO     | time since job start (2916s) is within the limit (349056.0s)
[2026-01-14 17:02:35] 2026-01-14 22:01:56,087 | INFO     | time since job start (2918s) is within the limit (349056.0s)
[2026-01-14 17:02:35] 2026-01-14 22:01:56,265 | WARNING  | process 7891 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 17:02:35] 2026-01-14 22:01:56,265 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969523571/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 17:02:35] 2026-01-14 22:01:56,351 | INFO     | number of running child processes to parent process 7891: 1
[2026-01-14 17:02:35] 2026-01-14 22:01:56,351 | INFO     | maximum number of monitored processes: 6
[2026-01-14 17:02:35] 2026-01-14 22:01:56,435 | INFO     | job 6969523571 has state=finished
[2026-01-14 17:02:35] 2026-01-14 22:01:56,435 | INFO     | preparing for final server update for job 6969523571 in state='finished'
[2026-01-14 17:02:35] 2026-01-14 22:01:56,435 | INFO     | this job has now completed (state=finished)
[2026-01-14 17:02:35] 2026-01-14 22:01:56,436 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 17:02:35] 2026-01-14 22:01:56,436 | INFO     | log transfer has been attempted: DONE
[2026-01-14 17:02:35] 2026-01-14 22:01:56,436 | INFO     | job 6969523571 has finished - writing final server update
[2026-01-14 17:02:35] 2026-01-14 22:01:56,436 | INFO     | total number of processed events: 400 (read)
[2026-01-14 17:02:35] 2026-01-14 22:01:56,437 | INFO     | executing command: lscpu
[2026-01-14 17:02:35] 2026-01-14 22:01:56,461 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 17:02:35] 2026-01-14 22:01:58,093 | INFO     | time since job start (2920s) is within the limit (349056.0s)
[2026-01-14 17:02:35] 2026-01-14 22:01:58,094 | INFO     | 2922s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-14 17:02:35] 2026-01-14 22:01:58,854 | INFO     | monitor loop #220: job 0:6969523571 is in state 'finished'
[2026-01-14 17:02:35] 2026-01-14 22:01:58,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:02:35] 2026-01-14 22:01:59,215 | INFO     | PID=1349 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 17:02:35] 2026-01-14 22:02:00,215 | INFO     | time since job start (2922s) is within the limit (349056.0s)
[2026-01-14 17:02:35] 2026-01-14 22:02:01,357 | INFO     | monitor loop #221: job 0:6969523571 is in state 'finished'
[2026-01-14 17:02:35] 2026-01-14 22:02:01,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:02:35] 2026-01-14 22:02:02,221 | INFO     | time since job start (2924s) is within the limit (349056.0s)
[2026-01-14 17:02:35] 2026-01-14 22:02:02,241 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 17:02:35] 2026-01-14 22:02:02,245 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-14 17:02:35] 2026-01-14 22:02:02,247 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969523571/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 17:02:35] 2026-01-14 22:02:02,248 | INFO     | extracted standard info from prmon json
[2026-01-14 17:02:35] 2026-01-14 22:02:02,249 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 17:02:35] 2026-01-14 22:02:02,249 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 17:02:35] 2026-01-14 22:02:02,249 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 17:02:35] 2026-01-14 22:02:02,249 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 17:02:35] 2026-01-14 22:02:02,250 | INFO     | fitting pss+swap vs Time
[2026-01-14 17:02:35] 2026-01-14 22:02:02,250 | INFO     | sum of square deviations: 21358540.0
[2026-01-14 17:02:35] 2026-01-14 22:02:02,250 | INFO     | sum of deviations: 463571208.0
[2026-01-14 17:02:35] 2026-01-14 22:02:02,251 | INFO     | mean x: 1768426752.0
[2026-01-14 17:02:35] 2026-01-14 22:02:02,251 | INFO     | mean y: 2790402.7073170734
[2026-01-14 17:02:35] 2026-01-14 22:02:02,251 | INFO     | intersect: -38379595550.83429
[2026-01-14 17:02:35] 2026-01-14 22:02:02,251 | INFO     | chi2: 0.0016055985496973486
[2026-01-14 17:02:35] 2026-01-14 22:02:02,251 | INFO     | current memory leak: 21.70 B/s (using 41 data points, chi2=0.00)
[2026-01-14 17:02:35] 2026-01-14 22:02:02,251 | INFO     | could have reported an average CPU frequency of 1904 MHz (5 samples)
[2026-01-14 17:02:35] 2026-01-14 22:02:02,252 | INFO     | ..............................
[2026-01-14 17:02:35] 2026-01-14 22:02:02,252 | INFO     | . Timing measurements:
[2026-01-14 17:02:35] 2026-01-14 22:02:02,252 | INFO     | . get job = 0 s
[2026-01-14 17:02:35] 2026-01-14 22:02:02,252 | INFO     | . initial setup = 2 s
[2026-01-14 17:02:35] 2026-01-14 22:02:02,252 | INFO     | . payload setup = 7 s
[2026-01-14 17:02:35] 2026-01-14 22:02:02,252 | INFO     | . stage-in = 0 s
[2026-01-14 17:02:35] 2026-01-14 22:02:02,252 | INFO     | . payload execution = 2886 s
[2026-01-14 17:02:35] 2026-01-14 22:02:02,252 | INFO     | . stage-out = 0 s
[2026-01-14 17:02:35] 2026-01-14 22:02:02,252 | INFO     | . log creation = 0 s
[2026-01-14 17:02:35] 2026-01-14 22:02:02,253 | INFO     | ..............................
[2026-01-14 17:02:35] 2026-01-14 22:02:02,557 | INFO     | 
[2026-01-14 17:02:35] 2026-01-14 22:02:02,557 | INFO     | job summary report
[2026-01-14 17:02:35] 2026-01-14 22:02:02,557 | INFO     | --------------------------------------------------
[2026-01-14 17:02:35] 2026-01-14 22:02:02,557 | INFO     | PanDA job id: 6969523571
[2026-01-14 17:02:35] 2026-01-14 22:02:02,557 | INFO     | task id: 48215263
[2026-01-14 17:02:35] 2026-01-14 22:02:02,557 | INFO     | errors: (none)
[2026-01-14 17:02:35] 2026-01-14 22:02:02,558 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 17:02:35] 2026-01-14 22:02:02,558 | INFO     | pilot state: finished 
[2026-01-14 17:02:35] 2026-01-14 22:02:02,558 | INFO     | transexitcode: 0
[2026-01-14 17:02:35] 2026-01-14 22:02:02,558 | INFO     | exeerrorcode: 0
[2026-01-14 17:02:35] 2026-01-14 22:02:02,558 | INFO     | exeerrordiag: 
[2026-01-14 17:02:35] 2026-01-14 22:02:02,558 | INFO     | exitcode: 0
[2026-01-14 17:02:35] 2026-01-14 22:02:02,559 | INFO     | exitmsg: OK
[2026-01-14 17:02:35] 2026-01-14 22:02:02,559 | INFO     | cpuconsumptiontime: 30518 s
[2026-01-14 17:02:35] 2026-01-14 22:02:02,559 | INFO     | nevents: 400
[2026-01-14 17:02:35] 2026-01-14 22:02:02,559 | INFO     | neventsw: 0
[2026-01-14 17:02:35] 2026-01-14 22:02:02,559 | INFO     | pid: 7891
[2026-01-14 17:02:35] 2026-01-14 22:02:02,559 | INFO     | pgrp: 7891
[2026-01-14 17:02:35] 2026-01-14 22:02:02,560 | INFO     | corecount: 12
[2026-01-14 17:02:35] 2026-01-14 22:02:02,560 | INFO     | event service: False
[2026-01-14 17:02:35] 2026-01-14 22:02:02,560 | INFO     | sizes: {0: 2283724, 1: 2283979, 6: 2284241, 12: 2284269, 2897: 2309566, 2899: 2318564, 2900: 2318748, 2908: 2318974}
[2026-01-14 17:02:35] 2026-01-14 22:02:02,560 | INFO     | --------------------------------------------------
[2026-01-14 17:02:35] 2026-01-14 22:02:02,560 | INFO     | 
[2026-01-14 17:02:35] 2026-01-14 22:02:02,560 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 17:02:35] 2026-01-14 22:02:02,581 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,582 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,582 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,582 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,585 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 17:02:35] 2026-01-14 22:02:02,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,585 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 17:02:35] 2026-01-14 22:02:02,585 | INFO     | job 6969523571 has completed (purged errors)
[2026-01-14 17:02:35] 2026-01-14 22:02:02,585 | INFO     | overall cleanup function is called
[2026-01-14 17:02:35] 2026-01-14 22:02:03,594 | INFO     | --- collectZombieJob: --- 10, [7891]
[2026-01-14 17:02:35] 2026-01-14 22:02:03,594 | INFO     | zombie collector waiting for pid 7891
[2026-01-14 17:02:35] 2026-01-14 22:02:03,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 17:02:35] 2026-01-14 22:02:03,594 | INFO     | collected zombie processes
[2026-01-14 17:02:35] 2026-01-14 22:02:03,594 | INFO     | will attempt to kill all subprocesses of pid=7891
[2026-01-14 17:02:35] 2026-01-14 22:02:03,685 | INFO     | process IDs to be killed: [7891] (in reverse order)
[2026-01-14 17:02:35] 2026-01-14 22:02:03,735 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 17:02:35] 2026-01-14 22:02:03,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 17:02:35] 2026-01-14 22:02:03,745 | INFO     | did not find any defunct processes belonging to 7891
[2026-01-14 17:02:35] 2026-01-14 22:02:03,747 | INFO     | did not find any defunct processes belonging to 7891
[2026-01-14 17:02:35] 2026-01-14 22:02:03,747 | INFO     | ready for new job
[2026-01-14 17:02:35] 2026-01-14 22:02:03,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 17:02:35] 2026-01-14 22:02:03,748 | INFO     | ***************************************
[2026-01-14 17:02:35] 2026-01-14 22:02:03,749 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 17:02:35] 2026-01-14 22:02:03,749 | INFO     | ***************************************
[2026-01-14 17:02:35] 2026-01-14 22:02:03,749 | INFO     | 
[2026-01-14 17:02:35] 2026-01-14 22:02:03,749 | INFO     | architecture information:
[2026-01-14 17:02:35] 2026-01-14 22:02:03,750 | INFO     | executing command: cat /etc/os-release
[2026-01-14 17:02:35] 2026-01-14 22:02:03,764 | INFO     | cat /etc/os-release:
[2026-01-14 17:02:35] NAME="CentOS Linux"
[2026-01-14 17:02:35] VERSION="7 (Core)"
[2026-01-14 17:02:35] ID="centos"
[2026-01-14 17:02:35] ID_LIKE="rhel fedora"
[2026-01-14 17:02:35] VERSION_ID="7"
[2026-01-14 17:02:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 17:02:35] ANSI_COLOR="0;31"
[2026-01-14 17:02:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 17:02:35] HOME_URL="https://www.centos.org/"
[2026-01-14 17:02:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 17:02:35] 
[2026-01-14 17:02:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 17:02:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 17:02:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 17:02:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 17:02:35] 
[2026-01-14 17:02:35] 2026-01-14 22:02:03,764 | INFO     | ***************************************
[2026-01-14 17:02:35] 2026-01-14 22:02:04,267 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 17:02:35] 2026-01-14 22:02:04,282 | INFO     | sufficient remaining disk space (28629270528 B)
[2026-01-14 17:02:35] 2026-01-14 22:02:04,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 17:02:35] 2026-01-14 22:02:04,283 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 17:02:35] 2026-01-14 22:02:04,283 | INFO     | update_server=False
[2026-01-14 17:02:35] 2026-01-14 22:02:04,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 17:02:35] 2026-01-14 22:02:04,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 17:02:35] 2026-01-14 22:02:04,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 17:02:35] 2026-01-14 22:02:04,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 17:02:35] 2026-01-14 22:02:04,865 | INFO     | aborting loop
[2026-01-14 17:02:35] 2026-01-14 22:02:05,047 | INFO     | all payload control threads have been joined
[2026-01-14 17:02:35] 2026-01-14 22:02:05,289 | INFO     | [job] retrieve thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:05,289 | INFO     | [job] queue monitor thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:05,303 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:05,311 | INFO     | all data control threads have been joined
[2026-01-14 17:02:35] 2026-01-14 22:02:05,422 | INFO     | all job control threads have been joined
[2026-01-14 17:02:35] 2026-01-14 22:02:05,501 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:05,515 | INFO     | [job] validate thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:05,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 17:02:35] 2026-01-14 22:02:05,675 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:05,871 | INFO     | [job] job monitor thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:05,899 | INFO     | [payload] failed_post thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:06,052 | INFO     | [payload] control thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:06,057 | INFO     | [data] copytool_in thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:06,316 | INFO     | [data] control thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:06,426 | INFO     | [job] control thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:06,463 | INFO     | [payload] validate_post thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:07,626 | INFO     | [data] copytool_out thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:08,289 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:14,495 | INFO     | job.realtimelogging is not enabled
[2026-01-14 17:02:35] 2026-01-14 22:02:15,500 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 17:02:35] 2026-01-14 22:02:22,148 | INFO     | [monitor] cgroup control has ended
[2026-01-14 17:02:35] 2026-01-14 22:02:22,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202584766272)>', '<ExcThread(monitor, started 140201976370944)>']
[2026-01-14 17:02:35] 2026-01-14 22:02:27,858 | INFO     | all workflow threads have been joined
[2026-01-14 17:02:35] 2026-01-14 22:02:27,858 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 17:02:35] 2026-01-14 22:02:27,859 | INFO     | traces error code: 0
[2026-01-14 17:02:35] 2026-01-14 22:02:27,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 17:02:35] 2026-01-14 22:02:35,425 | INFO     | PID=1349 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 17:02:35] 2026-01-14 22:02:35,426 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 17:02:35] 2026-01-14 22:02:35,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 17:02:35] 2026-01-14 22:02:35,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 17:02:35] 2026-01-14 22:02:35,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 17:02:35] 2026-01-14 22:02:35,426 | INFO     | [monitor] control thread has ended
[2026-01-14 17:02:35] 2026-01-14 22:02:35,522 [wrapper] ==== pilot stdout END ====
[2026-01-14 17:02:35] 2026-01-14 22:02:35,526 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 17:02:35] 2026-01-14 22:02:35,530 [wrapper] pilotpid: 1349
[2026-01-14 17:02:35] 2026-01-14 22:02:35,534 [wrapper] Pilot exit status: 0
[2026-01-14 17:02:35] 2026-01-14 22:02:35,549 [wrapper] pandaids: 6969523571
[2026-01-14 17:02:35] 2026-01-14 22:02:35,588 [wrapper] cleanup supervisor_pilot 26921 1350
[2026-01-14 17:02:35] 2026-01-14 22:02:35,592 [wrapper] Test setup, not cleaning
[2026-01-14 17:02:35] 2026-01-14 22:02:35,596 [wrapper] apfmon messages muted
[2026-01-14 17:02:35] 2026-01-14 22:02:35,599 [wrapper] ==== wrapper stdout END ====
[2026-01-14 17:02:35] 2026-01-14 22:02:35,603 [wrapper] ==== wrapper stderr END ====
[2026-01-14 17:02:35]  *** Error codes and diagnostics ***
[2026-01-14 17:02:35]     "exeErrorCode": 0,
[2026-01-14 17:02:35]     "exeErrorDiag": "",
[2026-01-14 17:02:35]     "pilotErrorCode": 0,
[2026-01-14 17:02:35]     "pilotErrorDiag": "",
[2026-01-14 17:02:35]  *** Listing of results directory ***
[2026-01-14 17:02:35] total 740644
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 11:41 queuedata.json
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 11:41 pilot3.tar.gz
[2026-01-14 17:02:35] -rwx------ 1 boincer umatlas     36322 Jan 14 11:42 runpilot2-wrapper.sh
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas       100 Jan 14 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 17:02:35] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 16:12 run_atlas
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas       105 Jan 14 16:12 job.xml
[2026-01-14 17:02:35] -rw-r--r-- 2 boincer umatlas 595601455 Jan 14 16:13 EVNT.32794306._001117.pool.root.1
[2026-01-14 17:02:35] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 16:13 start_atlas.sh
[2026-01-14 17:02:35] drwxrwx--x 2 boincer umatlas      4096 Jan 14 16:13 shared
[2026-01-14 17:02:35] -rw-r--r-- 2 boincer umatlas    592397 Jan 14 16:13 input.tar.gz
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas         0 Jan 14 16:13 boinc_lockfile
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas      2508 Jan 14 16:13 pandaJob.out
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas        57 Jan 14 16:13 setup.sh.local
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas    999596 Jan 14 16:13 agis_schedconf.cvmfs.json
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas   1516246 Jan 14 16:13 agis_ddmendpoints.agis.ALL.json
[2026-01-14 17:02:35] drwx------ 5 boincer umatlas      4096 Jan 14 16:13 pilot3
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas      5952 Jan 14 16:58 init_data.xml
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas 157251952 Jan 14 17:01 HITS.48215263._027916.pool.root.1
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas      1044 Jan 14 17:01 memory_monitor_summary.json
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas       530 Jan 14 17:01 boinc_task_state.xml
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas    374836 Jan 14 17:01 log.48215263._027916.job.log.tgz.1
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas        95 Jan 14 17:01 pilot_heartbeat.json
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas      7841 Jan 14 17:02 heartbeat.json
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 17:02 boinc_mmap_file
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas        27 Jan 14 17:02 wrapper_checkpoint.txt
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas       744 Jan 14 17:02 pilotlog.txt
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas    443238 Jan 14 17:02 log.48215263._027916.job.log.1
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas       357 Jan 14 17:02 output.list
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas       620 Jan 14 17:02 runtime_log
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas    839680 Jan 14 17:02 result.tar.gz
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas       659 Jan 14 17:02 x42LDmM8I08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlelKDmlXekzm.diag
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas      9344 Jan 14 17:02 runtime_log.err
[2026-01-14 17:02:35] -rw-r--r-- 1 boincer umatlas     22247 Jan 14 17:02 stderr.txt
[2026-01-14 17:02:35] HITS file was successfully produced:
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas 157251952 Jan 14 17:01 shared/HITS.pool.root.1
[2026-01-14 17:02:35]  *** Contents of shared directory: ***
[2026-01-14 17:02:35] total 736636
[2026-01-14 17:02:35] -rw-r--r-- 2 boincer umatlas 595601455 Jan 14 16:13 ATLAS.root_0
[2026-01-14 17:02:35] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 16:13 start_atlas.sh
[2026-01-14 17:02:35] -rw-r--r-- 2 boincer umatlas    592397 Jan 14 16:13 input.tar.gz
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas 157251952 Jan 14 17:01 HITS.pool.root.1
[2026-01-14 17:02:35] -rw------- 1 boincer umatlas    839680 Jan 14 17:02 result.tar.gz
17:02:37 (30079): run_atlas exited; CPU time 30499.080499
17:02:37 (30079): called boinc_finish(0)

</stderr_txt>
]]>

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