Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:41:24 (252772): wrapper (7.7.26015): starting
00:41:24 (252772): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 00:41:24] Arguments: --nthreads 4
[2026-01-15 00:41:24] Threads: 4
[2026-01-15 00:41:24] Checking for CVMFS
[2026-01-15 00:41:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 00:41:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 00:41:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 00:41:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 00:41:24] 2.9.2.0 2988 544 81444 155149 0 57 20203218 36864001 0 130560 0 661743 99.990 23588 24044 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 00:41:24] CVMFS is ok
[2026-01-15 00:41:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 00:41:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 00:41:24] Further information can be found at the LHC@home message board.
[2026-01-15 00:41:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 00:41:24] Checking for apptainer binary...
[2026-01-15 00:41:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 00:41:24] Running /usr/bin/apptainer --version
[2026-01-15 00:41:24] apptainer version 1.4.1-1.1
[2026-01-15 00:41:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 00:41:24] thA350a
[2026-01-15 00:41:24] apptainer works
[2026-01-15 00:41:24] Set ATHENA_PROC_NUMBER=4
[2026-01-15 00:41:24] Set ATHENA_CORE_NUMBER=4
[2026-01-15 00:41:24] Starting ATLAS job with PandaID=6969523295
[2026-01-15 00:41:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 01:30:41]  *** The last 200 lines of the pilot log: ***
[2026-01-15 01:30:41]  mtime=0
[2026-01-15 01:30:41]  protocol_id=None
[2026-01-15 01:30:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 01:30:41]  replicas=None
[2026-01-15 01:30:41]  scope=mc23_13p6TeV
[2026-01-15 01:30:41]  status=None
[2026-01-15 01:30:41]  status_code=0
[2026-01-15 01:30:41]  storage_token=
[2026-01-15 01:30:41]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6969523295/log.48215263._027696.job.log.tgz.1
[2026-01-15 01:30:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/11/log.48215263._027696.job.log.tgz.1
[2026-01-15 01:30:41]  workdir=None
[2026-01-15 01:30:41] ]
[2026-01-15 01:30:41] 2026-01-15 00:29:45,197 | INFO     | transferring file log.48215263._027696.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6969523295/log.48215263._027696.job.log.tgz.1 to /local/data/boinc/
[2026-01-15 01:30:41] 2026-01-15 00:29:45,197 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6969523295/log.48215263._027696.job.log.tgz.1 /local/data/boinc/slots/0/log.48215263._0276
[2026-01-15 01:30:41] 2026-01-15 00:29:45,215 | INFO     | adding to output.list: log.48215263._027696.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/11/log.48215263._027696.job.log.tg
[2026-01-15 01:30:41] 2026-01-15 00:29:45,216 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 01:30:41] 2026-01-15 00:29:45,216 | INFO     | summary of transferred files:
[2026-01-15 01:30:41] 2026-01-15 00:29:45,216 | INFO     |  -- lfn=log.48215263._027696.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 01:30:41] 2026-01-15 00:29:45,216 | INFO     | stage-out finished correctly
[2026-01-15 01:30:41] 2026-01-15 00:29:45,602 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 01:30:41] 2026-01-15 00:29:46,154 | INFO     | time since job start (2894s) is within the limit (349056.0s)
[2026-01-15 01:30:41] 2026-01-15 00:29:46,842 | INFO     | job 6969523295 has state=finished
[2026-01-15 01:30:41] 2026-01-15 00:29:46,843 | INFO     | preparing for final server update for job 6969523295 in state='finished'
[2026-01-15 01:30:41] 2026-01-15 00:29:46,843 | INFO     | this job has now completed (state=finished)
[2026-01-15 01:30:41] 2026-01-15 00:29:46,843 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 01:30:41] 2026-01-15 00:29:46,843 | INFO     | log transfer has been attempted: DONE
[2026-01-15 01:30:41] 2026-01-15 00:29:46,843 | INFO     | job 6969523295 has finished - writing final server update
[2026-01-15 01:30:41] 2026-01-15 00:29:46,843 | INFO     | total number of processed events: 400 (read)
[2026-01-15 01:30:41] 2026-01-15 00:29:46,844 | INFO     | executing command: lscpu
[2026-01-15 01:30:41] 2026-01-15 00:29:46,866 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 01:30:41] 2026-01-15 00:29:48,160 | INFO     | time since job start (2896s) is within the limit (349056.0s)
[2026-01-15 01:30:41] 2026-01-15 00:29:48,161 | INFO     | 2896s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-15 01:30:41] 2026-01-15 00:29:49,239 | INFO     | PID=256561 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 01:30:41] 2026-01-15 00:29:50,239 | INFO     | time since job start (2898s) is within the limit (349056.0s)
[2026-01-15 01:30:41] 2026-01-15 00:29:51,369 | WARNING  | process 263161 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 01:30:41] 2026-01-15 00:29:51,369 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6969523295/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 01:30:41] 2026-01-15 00:29:51,420 | INFO     | number of running child processes to parent process 263161: 1
[2026-01-15 01:30:41] 2026-01-15 00:29:51,420 | INFO     | maximum number of monitored processes: 6
[2026-01-15 01:30:41] 2026-01-15 00:29:51,593 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 01:30:41] 2026-01-15 00:29:51,595 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3250.6098749999996
[2026-01-15 01:30:41] 2026-01-15 00:29:51,596 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6969523295/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 01:30:41] 2026-01-15 00:29:51,596 | INFO     | extracted standard info from prmon json
[2026-01-15 01:30:41] 2026-01-15 00:29:51,597 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 01:30:41] 2026-01-15 00:29:51,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 01:30:41] 2026-01-15 00:29:51,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 01:30:41] 2026-01-15 00:29:51,597 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 01:30:41] 2026-01-15 00:29:51,597 | INFO     | fitting pss+swap vs Time
[2026-01-15 01:30:41] 2026-01-15 00:29:51,597 | INFO     | sum of square deviations: 19832930.0
[2026-01-15 01:30:41] 2026-01-15 00:29:51,597 | INFO     | sum of deviations: -2852600889.0
[2026-01-15 01:30:41] 2026-01-15 00:29:51,597 | INFO     | mean x: 1768435609.5
[2026-01-15 01:30:41] 2026-01-15 00:29:51,597 | INFO     | mean y: 2600502.05
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | intersect: 254359419781.85165
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | chi2: 0.04003449274882159
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | current memory leak: -143.83 B/s (using 40 data points, chi2=0.04)
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | could have reported an average CPU frequency of 3588 MHz (5 samples)
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | ..............................
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | . Timing measurements:
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | . get job = 0 s
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | . initial setup = 1 s
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | . payload setup = 4 s
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | . stage-in = 0 s
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | . payload execution = 2869 s
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | . stage-out = 0 s
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | . log creation = 0 s
[2026-01-15 01:30:41] 2026-01-15 00:29:51,598 | INFO     | ..............................
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | 
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | job summary report
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | --------------------------------------------------
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | PanDA job id: 6969523295
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | task id: 48215263
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | errors: (none)
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | pilot state: finished 
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | transexitcode: 0
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | exeerrorcode: 0
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | exeerrordiag: 
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | exitcode: 0
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | exitmsg: OK
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | cpuconsumptiontime: 10648 s
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | nevents: 400
[2026-01-15 01:30:41] 2026-01-15 00:29:51,637 | INFO     | neventsw: 0
[2026-01-15 01:30:41] 2026-01-15 00:29:51,638 | INFO     | pid: 263161
[2026-01-15 01:30:41] 2026-01-15 00:29:51,638 | INFO     | pgrp: 263161
[2026-01-15 01:30:41] 2026-01-15 00:29:51,638 | INFO     | corecount: 4
[2026-01-15 01:30:41] 2026-01-15 00:29:51,638 | INFO     | event service: False
[2026-01-15 01:30:41] 2026-01-15 00:29:51,638 | INFO     | sizes: {0: 2283783, 1: 2283982, 4: 2284244, 11: 2284272, 2877: 2309706, 2878: 2318893, 2884: 2319063}
[2026-01-15 01:30:41] 2026-01-15 00:29:51,638 | INFO     | --------------------------------------------------
[2026-01-15 01:30:41] 2026-01-15 00:29:51,638 | INFO     | 
[2026-01-15 01:30:41] 2026-01-15 00:29:51,638 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-15 01:30:41] 2026-01-15 00:29:51,655 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 01:30:41] 2026-01-15 00:29:51,656 | INFO     | job 6969523295 has completed (purged errors)
[2026-01-15 01:30:41] 2026-01-15 00:29:51,657 | INFO     | overall cleanup function is called
[2026-01-15 01:30:41] 2026-01-15 00:29:52,663 | INFO     | --- collectZombieJob: --- 10, [263161]
[2026-01-15 01:30:41] 2026-01-15 00:29:52,663 | INFO     | zombie collector waiting for pid 263161
[2026-01-15 01:30:41] 2026-01-15 00:29:52,663 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 01:30:41] 2026-01-15 00:29:52,663 | INFO     | collected zombie processes
[2026-01-15 01:30:41] 2026-01-15 00:29:52,663 | INFO     | will attempt to kill all subprocesses of pid=263161
[2026-01-15 01:30:41] 2026-01-15 00:29:52,706 | INFO     | process IDs to be killed: [263161] (in reverse order)
[2026-01-15 01:30:41] 2026-01-15 00:29:52,739 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 01:30:41] 2026-01-15 00:29:52,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 01:30:41] 2026-01-15 00:29:52,740 | INFO     | did not find any defunct processes belonging to 263161
[2026-01-15 01:30:41] 2026-01-15 00:29:52,742 | INFO     | did not find any defunct processes belonging to 263161
[2026-01-15 01:30:41] 2026-01-15 00:29:52,742 | INFO     | ready for new job
[2026-01-15 01:30:41] 2026-01-15 00:29:52,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 01:30:41] 2026-01-15 00:29:52,742 | INFO     | ***************************************
[2026-01-15 01:30:41] 2026-01-15 00:29:52,742 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 01:30:41] 2026-01-15 00:29:52,743 | INFO     | ***************************************
[2026-01-15 01:30:41] 2026-01-15 00:29:52,743 | INFO     | 
[2026-01-15 01:30:41] 2026-01-15 00:29:52,743 | INFO     | architecture information:
[2026-01-15 01:30:41] 2026-01-15 00:29:52,743 | INFO     | executing command: cat /etc/os-release
[2026-01-15 01:30:41] 2026-01-15 00:29:52,757 | INFO     | cat /etc/os-release:
[2026-01-15 01:30:41] NAME="CentOS Linux"
[2026-01-15 01:30:41] VERSION="7 (Core)"
[2026-01-15 01:30:41] ID="centos"
[2026-01-15 01:30:41] ID_LIKE="rhel fedora"
[2026-01-15 01:30:41] VERSION_ID="7"
[2026-01-15 01:30:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 01:30:41] ANSI_COLOR="0;31"
[2026-01-15 01:30:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 01:30:41] HOME_URL="https://www.centos.org/"
[2026-01-15 01:30:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 01:30:41] 
[2026-01-15 01:30:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 01:30:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 01:30:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 01:30:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 01:30:41] 
[2026-01-15 01:30:41] 2026-01-15 00:29:52,757 | INFO     | ***************************************
[2026-01-15 01:30:41] 2026-01-15 00:29:53,260 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 01:30:41] 2026-01-15 00:29:53,275 | INFO     | sufficient remaining disk space (238201864192 B)
[2026-01-15 01:30:41] 2026-01-15 00:29:53,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 01:30:41] 2026-01-15 00:29:53,276 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 01:30:41] 2026-01-15 00:29:53,276 | INFO     | update_server=False
[2026-01-15 01:30:41] 2026-01-15 00:29:53,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 01:30:41] 2026-01-15 00:29:53,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 01:30:41] 2026-01-15 00:29:53,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 01:30:41] 2026-01-15 00:29:53,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 01:30:41] 2026-01-15 00:29:53,276 | INFO     | aborting loop
[2026-01-15 01:30:41] 2026-01-15 00:29:54,281 | INFO     | [job] queue monitor thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:54,282 | INFO     | [job] retrieve thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:54,282 | INFO     | [job] job monitor thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:54,304 | INFO     | all data control threads have been joined
[2026-01-15 01:30:41] 2026-01-15 00:29:54,393 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:54,579 | INFO     | all payload control threads have been joined
[2026-01-15 01:30:41] 2026-01-15 00:29:54,669 | INFO     | [data] copytool_in thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:54,842 | INFO     | all job control threads have been joined
[2026-01-15 01:30:41] 2026-01-15 00:29:54,979 | INFO     | [payload] failed_post thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:55,282 | INFO     | [data] copytool_out thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:55,309 | INFO     | [data] control thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:55,404 | INFO     | [job] validate thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:55,509 | INFO     | [payload] validate_post thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:55,535 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:55,585 | INFO     | [payload] control thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:55,627 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:55,848 | INFO     | [job] control thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:29:56,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 01:30:41] 2026-01-15 00:30:00,156 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:30:03,512 | INFO     | job.realtimelogging is not enabled
[2026-01-15 01:30:41] 2026-01-15 00:30:04,518 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 01:30:41] 2026-01-15 00:30:23,367 | INFO     | PID=256561 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 01:30:41] 2026-01-15 00:30:23,368 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 01:30:41] 2026-01-15 00:30:23,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 01:30:41] 2026-01-15 00:30:23,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 01:30:41] 2026-01-15 00:30:35,525 | INFO     | [monitor] cgroup control has ended
[2026-01-15 01:30:41] 2026-01-15 00:30:35,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140401917478720)>', '<ExcThread(monitor, started 140401558132480)>']
[2026-01-15 01:30:41] 2026-01-15 00:30:36,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 01:30:41] 2026-01-15 00:30:36,437 | INFO     | [monitor] control thread has ended
[2026-01-15 01:30:41] 2026-01-15 00:30:40,908 | INFO     | all workflow threads have been joined
[2026-01-15 01:30:41] 2026-01-15 00:30:40,908 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 01:30:41] 2026-01-15 00:30:40,909 | INFO     | traces error code: 0
[2026-01-15 01:30:41] 2026-01-15 00:30:40,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 01:30:41] 2026-01-15 00:30:40,990 [wrapper] ==== pilot stdout END ====
[2026-01-15 01:30:41] 2026-01-15 00:30:40,994 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 01:30:41] 2026-01-15 00:30:40,998 [wrapper] pilotpid: 256561
[2026-01-15 01:30:41] 2026-01-15 00:30:41,001 [wrapper] Pilot exit status: 0
[2026-01-15 01:30:41] 2026-01-15 00:30:41,013 [wrapper] pandaids: 6969523295
[2026-01-15 01:30:41] 2026-01-15 00:30:41,036 [wrapper] cleanup supervisor_pilot  273067 256562
[2026-01-15 01:30:41] 2026-01-15 00:30:41,040 [wrapper] Test setup, not cleaning
[2026-01-15 01:30:41] 2026-01-15 00:30:41,044 [wrapper] apfmon messages muted
[2026-01-15 01:30:41] 2026-01-15 00:30:41,048 [wrapper] ==== wrapper stdout END ====
[2026-01-15 01:30:41] 2026-01-15 00:30:41,052 [wrapper] ==== wrapper stderr END ====
[2026-01-15 01:30:41]  *** Error codes and diagnostics ***
[2026-01-15 01:30:41]     "exeErrorCode": 0,
[2026-01-15 01:30:41]     "exeErrorDiag": "",
[2026-01-15 01:30:41]     "pilotErrorCode": 0,
[2026-01-15 01:30:41]     "pilotErrorDiag": "",
[2026-01-15 01:30:41]  *** Listing of results directory ***
[2026-01-15 01:30:41] total 730848
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc      5112 Jan 14 17:41 queuedata.json
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc    579449 Jan 14 17:41 pilot3.tar.gz
[2026-01-15 01:30:41] -rwx------ 1 boinc boinc     36322 Jan 14 17:42 runpilot2-wrapper.sh
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc       100 Jan 15 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 01:30:41] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 00:41 run_atlas
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc       105 Jan 15 00:41 job.xml
[2026-01-15 01:30:41] -rw-r--r-- 2 boinc boinc 591403327 Jan 15 00:41 EVNT.32794306._001109.pool.root.1
[2026-01-15 01:30:41] -rw-r--r-- 2 boinc boinc    592400 Jan 15 00:41 input.tar.gz
[2026-01-15 01:30:41] -rw-r--r-- 2 boinc boinc     15847 Jan 15 00:41 start_atlas.sh
[2026-01-15 01:30:41] drwxrwx--x 2 boinc boinc      4096 Jan 15 00:41 shared
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc         0 Jan 15 00:41 boinc_setup_complete
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc      6377 Jan 15 00:41 init_data.xml
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc         0 Jan 15 00:41 boinc_lockfile
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc      2508 Jan 15 00:41 pandaJob.out
[2026-01-15 01:30:41] -rw------- 1 boinc boinc    999488 Jan 15 00:41 agis_schedconf.cvmfs.json
[2026-01-15 01:30:41] -rw------- 1 boinc boinc   1516246 Jan 15 00:41 agis_ddmendpoints.agis.ALL.json
[2026-01-15 01:30:41] drwx------ 5 boinc boinc      4096 Jan 15 00:41 pilot3
[2026-01-15 01:30:41] -rw------- 1 boinc boinc 151705204 Jan 15 01:29 HITS.48215263._027696.pool.root.1
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc       531 Jan 15 01:29 boinc_task_state.xml
[2026-01-15 01:30:41] -rw------- 1 boinc boinc      1015 Jan 15 01:29 memory_monitor_summary.json
[2026-01-15 01:30:41] -rw------- 1 boinc boinc    227022 Jan 15 01:29 log.48215263._027696.job.log.tgz.1
[2026-01-15 01:30:41] -rw------- 1 boinc boinc        95 Jan 15 01:29 pilot_heartbeat.json
[2026-01-15 01:30:41] -rw------- 1 boinc boinc      7759 Jan 15 01:29 heartbeat.json
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc      8192 Jan 15 01:30 boinc_mmap_file
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc        27 Jan 15 01:30 wrapper_checkpoint.txt
[2026-01-15 01:30:41] -rw------- 1 boinc boinc      4823 Jan 15 01:30 pilotlog.txt
[2026-01-15 01:30:41] -rw------- 1 boinc boinc    446838 Jan 15 01:30 log.48215263._027696.job.log.1
[2026-01-15 01:30:41] -rw------- 1 boinc boinc       357 Jan 15 01:30 output.list
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc       620 Jan 15 01:30 runtime_log
[2026-01-15 01:30:41] -rw------- 1 boinc boinc    696320 Jan 15 01:30 result.tar.gz
[2026-01-15 01:30:41] -rw------- 1 boinc boinc       658 Jan 15 01:30 zkRNDm17I08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxmrKDmbcT01m.diag
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc      8902 Jan 15 01:30 runtime_log.err
[2026-01-15 01:30:41] -rw-r--r-- 1 boinc boinc     21828 Jan 15 01:30 stderr.txt
[2026-01-15 01:30:41] HITS file was successfully produced:
[2026-01-15 01:30:41] -rw------- 1 boinc boinc 151705204 Jan 15 01:29 shared/HITS.pool.root.1
[2026-01-15 01:30:41]  *** Contents of shared directory: ***
[2026-01-15 01:30:41] total 726980
[2026-01-15 01:30:41] -rw-r--r-- 2 boinc boinc 591403327 Jan 15 00:41 ATLAS.root_0
[2026-01-15 01:30:41] -rw-r--r-- 2 boinc boinc    592400 Jan 15 00:41 input.tar.gz
[2026-01-15 01:30:41] -rw-r--r-- 2 boinc boinc     15847 Jan 15 00:41 start_atlas.sh
[2026-01-15 01:30:41] -rw------- 1 boinc boinc 151705204 Jan 15 01:29 HITS.pool.root.1
[2026-01-15 01:30:41] -rw------- 1 boinc boinc    696320 Jan 15 01:30 result.tar.gz
01:30:42 (252772): run_atlas exited; CPU time 10654.240498
01:30:42 (252772): called boinc_finish(0)

</stderr_txt>
]]>

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