Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:58:58 (6213): wrapper (7.7.26015): starting
15:58:58 (6213): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 15:58:58] Arguments: --nthreads 8
[2026-01-14 15:58:58] Threads: 8
[2026-01-14 15:58:58] Checking for CVMFS
[2026-01-14 15:58:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 15:58:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 15:58:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 15:58:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 15:58:59] 2.11.2.0 2756 144372 94148 155144 1 57 16901846 20275201 1 130560 0 39983727 99.868 8109896 35405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 15:58:59] CVMFS is ok
[2026-01-14 15:58:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 15:58:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 15:58:59] Further information can be found at the LHC@home message board.
[2026-01-14 15:58:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 15:58:59] Checking for apptainer binary...
[2026-01-14 15:58:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 15:58:59] Running /usr/bin/apptainer --version
[2026-01-14 15:58:59] apptainer version 1.3.2-1.el7
[2026-01-14 15:58:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 15:59:01] c-115-14.aglt2.org
[2026-01-14 15:59:01] apptainer works
[2026-01-14 15:59:01] Set ATHENA_PROC_NUMBER=8
[2026-01-14 15:59:01] Set ATHENA_CORE_NUMBER=8
[2026-01-14 15:59:01] Starting ATLAS job with PandaID=6969524278
[2026-01-14 15:59:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 17:15:33]  *** The last 200 lines of the pilot log: ***
[2026-01-14 17:15:34]  status_code=0
[2026-01-14 17:15:34]  storage_token=
[2026-01-14 17:15:34]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969524278/log.48215263._028345.job.log.tgz.1
[2026-01-14 17:15:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/57/log.48215263._028345.job.log.tgz.1
[2026-01-14 17:15:34]  workdir=None
[2026-01-14 17:15:34] ]
[2026-01-14 17:15:34] 2026-01-14 22:14:28,840 | INFO     | transferring file log.48215263._028345.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969524278/log.48215263._028345.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 17:15:34] 2026-01-14 22:14:28,840 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969524278/log.48215263._028345.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._028345.job
[2026-01-14 17:15:34] 2026-01-14 22:14:28,867 | INFO     | adding to output.list: log.48215263._028345.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/57/log.48215263._028345.job.log.tg
[2026-01-14 17:15:34] 2026-01-14 22:14:28,868 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 17:15:34] 2026-01-14 22:14:28,868 | INFO     | summary of transferred files:
[2026-01-14 17:15:34] 2026-01-14 22:14:28,868 | INFO     |  -- lfn=log.48215263._028345.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 17:15:34] 2026-01-14 22:14:28,868 | INFO     | stage-out finished correctly
[2026-01-14 17:15:34] 2026-01-14 22:14:29,818 | INFO     | time since job start (4510s) is within the limit (349056.0s)
[2026-01-14 17:15:34] 2026-01-14 22:14:31,824 | INFO     | time since job start (4512s) is within the limit (349056.0s)
[2026-01-14 17:15:34] 2026-01-14 22:14:32,084 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 17:15:34] 2026-01-14 22:14:32,966 | WARNING  | process 16737 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 17:15:34] 2026-01-14 22:14:32,966 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969524278/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 17:15:34] 2026-01-14 22:14:33,043 | INFO     | number of running child processes to parent process 16737: 1
[2026-01-14 17:15:34] 2026-01-14 22:14:33,044 | INFO     | maximum number of monitored processes: 6
[2026-01-14 17:15:34] 2026-01-14 22:14:33,830 | INFO     | time since job start (4514s) is within the limit (349056.0s)
[2026-01-14 17:15:34] 2026-01-14 22:14:34,144 | INFO     | job 6969524278 has state=finished
[2026-01-14 17:15:34] 2026-01-14 22:14:34,145 | INFO     | preparing for final server update for job 6969524278 in state='finished'
[2026-01-14 17:15:34] 2026-01-14 22:14:34,145 | INFO     | this job has now completed (state=finished)
[2026-01-14 17:15:34] 2026-01-14 22:14:34,146 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 17:15:34] 2026-01-14 22:14:34,146 | INFO     | log transfer has been attempted: DONE
[2026-01-14 17:15:34] 2026-01-14 22:14:34,146 | INFO     | job 6969524278 has finished - writing final server update
[2026-01-14 17:15:34] 2026-01-14 22:14:34,147 | INFO     | total number of processed events: 400 (read)
[2026-01-14 17:15:34] 2026-01-14 22:14:34,148 | INFO     | executing command: lscpu
[2026-01-14 17:15:34] 2026-01-14 22:14:34,175 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 17:15:34] 2026-01-14 22:14:35,546 | INFO     | monitor loop #335: job 0:6969524278 is in state 'finished'
[2026-01-14 17:15:34] 2026-01-14 22:14:35,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:15:34] 2026-01-14 22:14:35,836 | INFO     | time since job start (4516s) is within the limit (349056.0s)
[2026-01-14 17:15:34] 2026-01-14 22:14:37,841 | INFO     | time since job start (4518s) is within the limit (349056.0s)
[2026-01-14 17:15:34] 2026-01-14 22:14:38,051 | INFO     | monitor loop #336: job 0:6969524278 is in state 'finished'
[2026-01-14 17:15:34] 2026-01-14 22:14:38,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:15:34] 2026-01-14 22:14:39,848 | INFO     | time since job start (4520s) is within the limit (349056.0s)
[2026-01-14 17:15:34] 2026-01-14 22:14:40,557 | INFO     | monitor loop #337: job 0:6969524278 is in state 'finished'
[2026-01-14 17:15:34] 2026-01-14 22:14:40,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:15:34] 2026-01-14 22:14:40,636 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 17:15:34] 2026-01-14 22:14:40,640 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1779.0
[2026-01-14 17:15:34] 2026-01-14 22:14:40,642 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969524278/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 17:15:34] 2026-01-14 22:14:40,643 | INFO     | extracted standard info from prmon json
[2026-01-14 17:15:34] 2026-01-14 22:14:40,644 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 17:15:34] 2026-01-14 22:14:40,644 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 17:15:34] 2026-01-14 22:14:40,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 17:15:34] 2026-01-14 22:14:40,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 17:15:34] 2026-01-14 22:14:40,647 | INFO     | fitting pss+swap vs Time
[2026-01-14 17:15:34] 2026-01-14 22:14:40,647 | INFO     | sum of square deviations: 93240818.0
[2026-01-14 17:15:34] 2026-01-14 22:14:40,648 | INFO     | sum of deviations: -5050641644.0
[2026-01-14 17:15:34] 2026-01-14 22:14:40,648 | INFO     | mean x: 1768426708.0
[2026-01-14 17:15:34] 2026-01-14 22:14:40,648 | INFO     | mean y: 2596756.074626866
[2026-01-14 17:15:34] 2026-01-14 22:14:40,648 | INFO     | intersect: 95794222863.2869
[2026-01-14 17:15:34] 2026-01-14 22:14:40,648 | INFO     | chi2: 0.06285523850613547
[2026-01-14 17:15:34] 2026-01-14 22:14:40,648 | INFO     | current memory leak: -54.17 B/s (using 67 data points, chi2=0.06)
[2026-01-14 17:15:34] 2026-01-14 22:14:40,649 | INFO     | could have reported an average CPU frequency of 2012 MHz (6 samples)
[2026-01-14 17:15:34] 2026-01-14 22:14:40,649 | INFO     | ..............................
[2026-01-14 17:15:34] 2026-01-14 22:14:40,649 | INFO     | . Timing measurements:
[2026-01-14 17:15:34] 2026-01-14 22:14:40,649 | INFO     | . get job = 0 s
[2026-01-14 17:15:34] 2026-01-14 22:14:40,649 | INFO     | . initial setup = 2 s
[2026-01-14 17:15:34] 2026-01-14 22:14:40,650 | INFO     | . payload setup = 8 s
[2026-01-14 17:15:34] 2026-01-14 22:14:40,650 | INFO     | . stage-in = 0 s
[2026-01-14 17:15:34] 2026-01-14 22:14:40,650 | INFO     | . payload execution = 4479 s
[2026-01-14 17:15:34] 2026-01-14 22:14:40,650 | INFO     | . stage-out = 0 s
[2026-01-14 17:15:34] 2026-01-14 22:14:40,650 | INFO     | . log creation = 0 s
[2026-01-14 17:15:34] 2026-01-14 22:14:40,650 | INFO     | ..............................
[2026-01-14 17:15:34] 2026-01-14 22:14:40,739 | INFO     | 
[2026-01-14 17:15:34] 2026-01-14 22:14:40,739 | INFO     | job summary report
[2026-01-14 17:15:34] 2026-01-14 22:14:40,740 | INFO     | --------------------------------------------------
[2026-01-14 17:15:34] 2026-01-14 22:14:40,740 | INFO     | PanDA job id: 6969524278
[2026-01-14 17:15:34] 2026-01-14 22:14:40,740 | INFO     | task id: 48215263
[2026-01-14 17:15:34] 2026-01-14 22:14:40,740 | INFO     | errors: (none)
[2026-01-14 17:15:34] 2026-01-14 22:14:40,740 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 17:15:34] 2026-01-14 22:14:40,740 | INFO     | pilot state: finished 
[2026-01-14 17:15:34] 2026-01-14 22:14:40,741 | INFO     | transexitcode: 0
[2026-01-14 17:15:34] 2026-01-14 22:14:40,741 | INFO     | exeerrorcode: 0
[2026-01-14 17:15:34] 2026-01-14 22:14:40,741 | INFO     | exeerrordiag: 
[2026-01-14 17:15:34] 2026-01-14 22:14:40,741 | INFO     | exitcode: 0
[2026-01-14 17:15:34] 2026-01-14 22:14:40,741 | INFO     | exitmsg: OK
[2026-01-14 17:15:34] 2026-01-14 22:14:40,741 | INFO     | cpuconsumptiontime: 33314 s
[2026-01-14 17:15:34] 2026-01-14 22:14:40,741 | INFO     | nevents: 400
[2026-01-14 17:15:34] 2026-01-14 22:14:40,741 | INFO     | neventsw: 0
[2026-01-14 17:15:34] 2026-01-14 22:14:40,742 | INFO     | pid: 16737
[2026-01-14 17:15:34] 2026-01-14 22:14:40,742 | INFO     | pgrp: 16737
[2026-01-14 17:15:34] 2026-01-14 22:14:40,742 | INFO     | corecount: 8
[2026-01-14 17:15:34] 2026-01-14 22:14:40,742 | INFO     | event service: False
[2026-01-14 17:15:34] 2026-01-14 22:14:40,742 | INFO     | sizes: {0: 2283778, 1: 2283977, 6: 2284239, 11: 2284267, 4491: 2310341, 4492: 2319339, 4495: 2319523, 4504: 2319717}
[2026-01-14 17:15:34] 2026-01-14 22:14:40,742 | INFO     | --------------------------------------------------
[2026-01-14 17:15:34] 2026-01-14 22:14:40,742 | INFO     | 
[2026-01-14 17:15:34] 2026-01-14 22:14:40,742 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 17:15:34] 2026-01-14 22:14:40,770 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,770 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,771 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,771 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,771 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,771 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,772 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,772 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,772 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,772 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,773 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 17:15:34] 2026-01-14 22:14:40,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,773 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 17:15:34] 2026-01-14 22:14:40,774 | INFO     | job 6969524278 has completed (purged errors)
[2026-01-14 17:15:34] 2026-01-14 22:14:40,774 | INFO     | overall cleanup function is called
[2026-01-14 17:15:34] 2026-01-14 22:14:41,782 | INFO     | --- collectZombieJob: --- 10, [16737]
[2026-01-14 17:15:34] 2026-01-14 22:14:41,782 | INFO     | zombie collector waiting for pid 16737
[2026-01-14 17:15:34] 2026-01-14 22:14:41,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 17:15:34] 2026-01-14 22:14:41,783 | INFO     | collected zombie processes
[2026-01-14 17:15:34] 2026-01-14 22:14:41,783 | INFO     | will attempt to kill all subprocesses of pid=16737
[2026-01-14 17:15:34] 2026-01-14 22:14:41,870 | INFO     | process IDs to be killed: [16737] (in reverse order)
[2026-01-14 17:15:34] 2026-01-14 22:14:41,926 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 17:15:34] 2026-01-14 22:14:41,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 17:15:34] 2026-01-14 22:14:41,931 | INFO     | did not find any defunct processes belonging to 16737
[2026-01-14 17:15:34] 2026-01-14 22:14:41,934 | INFO     | did not find any defunct processes belonging to 16737
[2026-01-14 17:15:34] 2026-01-14 22:14:41,934 | INFO     | ready for new job
[2026-01-14 17:15:34] 2026-01-14 22:14:41,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 17:15:34] 2026-01-14 22:14:41,936 | INFO     | ***************************************
[2026-01-14 17:15:34] 2026-01-14 22:14:41,936 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 17:15:34] 2026-01-14 22:14:41,936 | INFO     | ***************************************
[2026-01-14 17:15:34] 2026-01-14 22:14:41,936 | INFO     | 
[2026-01-14 17:15:34] 2026-01-14 22:14:41,936 | INFO     | architecture information:
[2026-01-14 17:15:34] 2026-01-14 22:14:41,937 | INFO     | executing command: cat /etc/os-release
[2026-01-14 17:15:34] 2026-01-14 22:14:41,955 | INFO     | cat /etc/os-release:
[2026-01-14 17:15:34] NAME="CentOS Linux"
[2026-01-14 17:15:34] VERSION="7 (Core)"
[2026-01-14 17:15:34] ID="centos"
[2026-01-14 17:15:34] ID_LIKE="rhel fedora"
[2026-01-14 17:15:34] VERSION_ID="7"
[2026-01-14 17:15:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 17:15:34] ANSI_COLOR="0;31"
[2026-01-14 17:15:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 17:15:34] HOME_URL="https://www.centos.org/"
[2026-01-14 17:15:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 17:15:34] 
[2026-01-14 17:15:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 17:15:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 17:15:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 17:15:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 17:15:34] 
[2026-01-14 17:15:34] 2026-01-14 22:14:41,956 | INFO     | ***************************************
[2026-01-14 17:15:34] 2026-01-14 22:14:42,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 17:15:34] 2026-01-14 22:14:42,481 | INFO     | sufficient remaining disk space (17849909248 B)
[2026-01-14 17:15:34] 2026-01-14 22:14:42,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 17:15:34] 2026-01-14 22:14:42,482 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 17:15:34] 2026-01-14 22:14:42,482 | INFO     | update_server=False
[2026-01-14 17:15:34] 2026-01-14 22:14:42,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 17:15:34] 2026-01-14 22:14:42,483 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 17:15:34] 2026-01-14 22:14:42,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 17:15:34] 2026-01-14 22:14:42,483 | INFO     | aborting loop
[2026-01-14 17:15:34] 2026-01-14 22:14:42,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 17:15:34] 2026-01-14 22:14:42,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 17:15:34] 2026-01-14 22:14:43,111 | INFO     | all data control threads have been joined
[2026-01-14 17:15:34] 2026-01-14 22:14:43,486 | INFO     | [job] retrieve thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:43,488 | INFO     | [job] job monitor thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:43,489 | INFO     | [job] queue monitor thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:43,526 | INFO     | [payload] validate_post thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:43,616 | INFO     | [payload] failed_post thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:43,871 | INFO     | [job] validate thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:43,878 | INFO     | all job control threads have been joined
[2026-01-14 17:15:34] 2026-01-14 22:14:43,921 | INFO     | all payload control threads have been joined
[2026-01-14 17:15:34] 2026-01-14 22:14:44,052 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:44,117 | INFO     | [data] control thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:44,138 | INFO     | [data] copytool_in thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:44,143 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:44,195 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:44,225 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:44,488 | INFO     | [data] copytool_out thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:44,883 | INFO     | [job] control thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:44,926 | INFO     | [payload] control thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:14:46,683 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 17:15:34] 2026-01-14 22:15:13,056 | INFO     | PID=10374 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 17:15:34] 2026-01-14 22:15:13,056 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 17:15:34] 2026-01-14 22:15:13,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 17:15:34] 2026-01-14 22:15:13,057 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 17:15:34] 2026-01-14 22:15:26,640 | INFO     | [monitor] cgroup control has ended
[2026-01-14 17:15:34] 2026-01-14 22:15:28,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081706538816)>', '<ExcThread(monitor, started 140081247524608)>']
[2026-01-14 17:15:34] 2026-01-14 22:15:29,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 17:15:34] 2026-01-14 22:15:29,140 | INFO     | [monitor] control thread has ended
[2026-01-14 17:15:34] 2026-01-14 22:15:33,657 | INFO     | all workflow threads have been joined
[2026-01-14 17:15:34] 2026-01-14 22:15:33,657 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 17:15:34] 2026-01-14 22:15:33,658 | INFO     | traces error code: 0
[2026-01-14 17:15:34] 2026-01-14 22:15:33,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 17:15:34] 2026-01-14 22:15:33,761 [wrapper] ==== pilot stdout END ====
[2026-01-14 17:15:34] 2026-01-14 22:15:33,766 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 17:15:34] 2026-01-14 22:15:33,770 [wrapper] pilotpid: 10374
[2026-01-14 17:15:34] 2026-01-14 22:15:33,774 [wrapper] Pilot exit status: 0
[2026-01-14 17:15:34] 2026-01-14 22:15:33,795 [wrapper] pandaids: 6969524278
[2026-01-14 17:15:34] 2026-01-14 22:15:33,843 [wrapper] cleanup supervisor_pilot 21939 10375
[2026-01-14 17:15:34] 2026-01-14 22:15:33,848 [wrapper] Test setup, not cleaning
[2026-01-14 17:15:34] 2026-01-14 22:15:33,852 [wrapper] apfmon messages muted
[2026-01-14 17:15:34] 2026-01-14 22:15:33,857 [wrapper] ==== wrapper stdout END ====
[2026-01-14 17:15:34] 2026-01-14 22:15:33,861 [wrapper] ==== wrapper stderr END ====
[2026-01-14 17:15:34]  *** Error codes and diagnostics ***
[2026-01-14 17:15:34]     "exeErrorCode": 0,
[2026-01-14 17:15:34]     "exeErrorDiag": "",
[2026-01-14 17:15:34]     "pilotErrorCode": 0,
[2026-01-14 17:15:34]     "pilotErrorDiag": "",
[2026-01-14 17:15:34]  *** Listing of results directory ***
[2026-01-14 17:15:34] total 742848
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 11:41 queuedata.json
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 11:41 pilot3.tar.gz
[2026-01-14 17:15:34] -rwx------ 1 boincer umatlas     36322 Jan 14 11:41 runpilot2-wrapper.sh
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas       100 Jan 14 15:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 17:15:34] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 15:58 run_atlas
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas       105 Jan 14 15:58 job.xml
[2026-01-14 17:15:34] -rw-r--r-- 2 boincer umatlas 597226224 Jan 14 15:58 EVNT.32794306._001135.pool.root.1
[2026-01-14 17:15:34] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 15:58 start_atlas.sh
[2026-01-14 17:15:34] drwxrwx--x 2 boincer umatlas      4096 Jan 14 15:58 shared
[2026-01-14 17:15:34] -rw-r--r-- 2 boincer umatlas    592402 Jan 14 15:58 input.tar.gz
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas         0 Jan 14 15:58 boinc_lockfile
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas      2507 Jan 14 15:59 pandaJob.out
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas        57 Jan 14 15:59 setup.sh.local
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas    999596 Jan 14 15:59 agis_schedconf.cvmfs.json
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas   1516246 Jan 14 15:59 agis_ddmendpoints.agis.ALL.json
[2026-01-14 17:15:34] drwx------ 5 boincer umatlas      4096 Jan 14 15:59 pilot3
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas      5909 Jan 14 17:12 init_data.xml
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas 157586793 Jan 14 17:14 HITS.48215263._028345.pool.root.1
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas       530 Jan 14 17:14 boinc_task_state.xml
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas        95 Jan 14 17:14 pilot_heartbeat.json
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas      1044 Jan 14 17:14 memory_monitor_summary.json
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas    311615 Jan 14 17:14 log.48215263._028345.job.log.tgz.1
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas      7840 Jan 14 17:14 heartbeat.json
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 17:15 boinc_mmap_file
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas        27 Jan 14 17:15 wrapper_checkpoint.txt
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas      4746 Jan 14 17:15 pilotlog.txt
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas    654068 Jan 14 17:15 log.48215263._028345.job.log.1
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas       357 Jan 14 17:15 output.list
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas       620 Jan 14 17:15 runtime_log
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas    983040 Jan 14 17:15 result.tar.gz
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas       658 Jan 14 17:15 SxcMDm16I08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLdlKDmzuH7Sm.diag
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas      9342 Jan 14 17:15 runtime_log.err
[2026-01-14 17:15:34] -rw-r--r-- 1 boincer umatlas     22167 Jan 14 17:15 stderr.txt
[2026-01-14 17:15:34] HITS file was successfully produced:
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas 157586793 Jan 14 17:14 shared/HITS.pool.root.1
[2026-01-14 17:15:34]  *** Contents of shared directory: ***
[2026-01-14 17:15:34] total 738692
[2026-01-14 17:15:34] -rw-r--r-- 2 boincer umatlas 597226224 Jan 14 15:58 ATLAS.root_0
[2026-01-14 17:15:34] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 15:58 start_atlas.sh
[2026-01-14 17:15:34] -rw-r--r-- 2 boincer umatlas    592402 Jan 14 15:58 input.tar.gz
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas 157586793 Jan 14 17:14 HITS.pool.root.1
[2026-01-14 17:15:34] -rw------- 1 boincer umatlas    983040 Jan 14 17:15 result.tar.gz
17:15:35 (6213): run_atlas exited; CPU time 33293.789759
17:15:35 (6213): called boinc_finish(0)

</stderr_txt>
]]>

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