Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:59:14 (3079712): wrapper (7.7.26015): starting
16:59:14 (3079712): wrapper: running run_atlas (--nthreads 10)
[2026-01-14 16:59:14] Arguments: --nthreads 10
[2026-01-14 16:59:14] Threads: 10
[2026-01-14 16:59:14] Checking for CVMFS
[2026-01-14 16:59:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 16:59:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 16:59:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 16:59:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 16:59:14] 2.13.3.0 11160 101181 396812 155145 1 417 25461439 32935936 18852 16776704 0 291439301 99.517 441589032 40252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 16:59:14] CVMFS is ok
[2026-01-14 16:59:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 16:59:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 16:59:14] Further information can be found at the LHC@home message board.
[2026-01-14 16:59:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 16:59:14] Checking for apptainer binary...
[2026-01-14 16:59:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 16:59:14] Running /usr/bin/apptainer --version
[2026-01-14 16:59:18] apptainer version 1.4.5-2.el9
[2026-01-14 16:59:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 16:59:22] c6-2-29-2.aglt2.org
[2026-01-14 16:59:22] apptainer works
[2026-01-14 16:59:22] Set ATHENA_PROC_NUMBER=10
[2026-01-14 16:59:22] Set ATHENA_CORE_NUMBER=10
[2026-01-14 16:59:22] Starting ATLAS job with PandaID=6969523800
[2026-01-14 16:59:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 18:16:50]  *** The last 200 lines of the pilot log: ***
[2026-01-14 18:16:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/fa/log.48215263._028145.job.log.tgz.1
[2026-01-14 18:16:50]  workdir=None
[2026-01-14 18:16:50] ]
[2026-01-14 18:16:50] 2026-01-14 23:16:06,490 | INFO     | transferring file log.48215263._028145.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6969523800/log.48215263._028145.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 18:16:50] 2026-01-14 23:16:06,490 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6969523800/log.48215263._028145.job.log.tgz.1 /tmp/boinchome/slots/2/log.48215263._028145.job
[2026-01-14 18:16:50] 2026-01-14 23:16:06,510 | INFO     | adding to output.list: log.48215263._028145.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/fa/log.48215263._028145.job.log.tg
[2026-01-14 18:16:50] 2026-01-14 23:16:06,512 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 18:16:50] 2026-01-14 23:16:06,513 | INFO     | summary of transferred files:
[2026-01-14 18:16:50] 2026-01-14 23:16:06,513 | INFO     |  -- lfn=log.48215263._028145.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 18:16:50] 2026-01-14 23:16:06,513 | INFO     | stage-out finished correctly
[2026-01-14 18:16:50] 2026-01-14 23:16:06,662 | INFO     | time since job start (4592s) is within the limit (349056.0s)
[2026-01-14 18:16:50] 2026-01-14 23:16:06,971 | INFO     | monitor loop #311: job 0:6969523800 is in state 'finished'
[2026-01-14 18:16:50] 2026-01-14 23:16:06,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 18:16:50] 2026-01-14 23:16:07,807 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 18:16:50] 2026-01-14 23:16:08,472 | INFO     | job 6969523800 has state=finished
[2026-01-14 18:16:50] 2026-01-14 23:16:08,472 | INFO     | preparing for final server update for job 6969523800 in state='finished'
[2026-01-14 18:16:50] 2026-01-14 23:16:08,473 | INFO     | this job has now completed (state=finished)
[2026-01-14 18:16:50] 2026-01-14 23:16:08,473 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 18:16:50] 2026-01-14 23:16:08,473 | INFO     | log transfer has been attempted: DONE
[2026-01-14 18:16:50] 2026-01-14 23:16:08,473 | INFO     | job 6969523800 has finished - writing final server update
[2026-01-14 18:16:50] 2026-01-14 23:16:08,473 | INFO     | total number of processed events: 400 (read)
[2026-01-14 18:16:50] 2026-01-14 23:16:08,477 | INFO     | executing command: lscpu
[2026-01-14 18:16:50] 2026-01-14 23:16:08,542 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 18:16:50] 2026-01-14 23:16:08,669 | INFO     | time since job start (4594s) is within the limit (349056.0s)
[2026-01-14 18:16:50] 2026-01-14 23:16:09,489 | INFO     | monitor loop #312: job 0:6969523800 is in state 'finished'
[2026-01-14 18:16:50] 2026-01-14 23:16:09,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 18:16:50] 2026-01-14 23:16:10,679 | INFO     | time since job start (4596s) is within the limit (349056.0s)
[2026-01-14 18:16:50] 2026-01-14 23:16:11,993 | INFO     | monitor loop #313: job 0:6969523800 is in state 'finished'
[2026-01-14 18:16:50] 2026-01-14 23:16:11,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 18:16:50] 2026-01-14 23:16:12,686 | INFO     | time since job start (4598s) is within the limit (349056.0s)
[2026-01-14 18:16:50] 2026-01-14 23:16:14,278 | INFO     | PID=3084068 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 18:16:50] 2026-01-14 23:16:14,278 | INFO     | .. there are 23 such processes running
[2026-01-14 18:16:50] 2026-01-14 23:16:14,501 | INFO     | monitor loop #314: job 0:6969523800 is in state 'finished'
[2026-01-14 18:16:50] 2026-01-14 23:16:14,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 18:16:50] 2026-01-14 23:16:15,279 | INFO     | time since job start (4601s) is within the limit (349056.0s)
[2026-01-14 18:16:50] 2026-01-14 23:16:17,019 | INFO     | monitor loop #315: job 0:6969523800 is in state 'finished'
[2026-01-14 18:16:50] 2026-01-14 23:16:17,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 18:16:50] 2026-01-14 23:16:17,095 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 18:16:50] 2026-01-14 23:16:17,103 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3123.2993749999996
[2026-01-14 18:16:50] 2026-01-14 23:16:17,113 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969523800/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 18:16:50] 2026-01-14 23:16:17,114 | INFO     | extracted standard info from prmon json
[2026-01-14 18:16:50] 2026-01-14 23:16:17,114 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 18:16:50] 2026-01-14 23:16:17,114 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 18:16:50] 2026-01-14 23:16:17,115 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 18:16:50] 2026-01-14 23:16:17,115 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 18:16:50] 2026-01-14 23:16:17,117 | INFO     | fitting pss+swap vs Time
[2026-01-14 18:16:50] 2026-01-14 23:16:17,117 | INFO     | sum of square deviations: 97485268.05882339
[2026-01-14 18:16:50] 2026-01-14 23:16:17,117 | INFO     | sum of deviations: -7283459348.647061
[2026-01-14 18:16:50] 2026-01-14 23:16:17,117 | INFO     | mean x: 1768430346.6176472
[2026-01-14 18:16:50] 2026-01-14 23:16:17,117 | INFO     | mean y: 2703578.205882353
[2026-01-14 18:16:50] 2026-01-14 23:16:17,117 | INFO     | intersect: 132128211329.09389
[2026-01-14 18:16:50] 2026-01-14 23:16:17,118 | INFO     | chi2: 0.10609587630079391
[2026-01-14 18:16:50] 2026-01-14 23:16:17,118 | INFO     | current memory leak: -74.71 B/s (using 68 data points, chi2=0.11)
[2026-01-14 18:16:50] 2026-01-14 23:16:17,118 | INFO     | could have reported an average CPU frequency of 3141 MHz (6 samples)
[2026-01-14 18:16:50] 2026-01-14 23:16:17,118 | INFO     | ..............................
[2026-01-14 18:16:50] 2026-01-14 23:16:17,118 | INFO     | . Timing measurements:
[2026-01-14 18:16:50] 2026-01-14 23:16:17,118 | INFO     | . get job = 0 s
[2026-01-14 18:16:50] 2026-01-14 23:16:17,118 | INFO     | . initial setup = 2 s
[2026-01-14 18:16:50] 2026-01-14 23:16:17,118 | INFO     | . payload setup = 4 s
[2026-01-14 18:16:50] 2026-01-14 23:16:17,118 | INFO     | . stage-in = 0 s
[2026-01-14 18:16:50] 2026-01-14 23:16:17,119 | INFO     | . payload execution = 4567 s
[2026-01-14 18:16:50] 2026-01-14 23:16:17,119 | INFO     | . stage-out = 1 s
[2026-01-14 18:16:50] 2026-01-14 23:16:17,119 | INFO     | . log creation = 0 s
[2026-01-14 18:16:50] 2026-01-14 23:16:17,119 | INFO     | ..............................
[2026-01-14 18:16:50] 2026-01-14 23:16:17,208 | INFO     | 
[2026-01-14 18:16:50] 2026-01-14 23:16:17,227 | INFO     | job summary report
[2026-01-14 18:16:50] 2026-01-14 23:16:17,227 | INFO     | --------------------------------------------------
[2026-01-14 18:16:50] 2026-01-14 23:16:17,227 | INFO     | PanDA job id: 6969523800
[2026-01-14 18:16:50] 2026-01-14 23:16:17,227 | INFO     | task id: 48215263
[2026-01-14 18:16:50] 2026-01-14 23:16:17,227 | INFO     | errors: (none)
[2026-01-14 18:16:50] 2026-01-14 23:16:17,227 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 18:16:50] 2026-01-14 23:16:17,227 | INFO     | pilot state: finished 
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | transexitcode: 0
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | exeerrorcode: 0
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | exeerrordiag: 
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | exitcode: 0
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | exitmsg: OK
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | cpuconsumptiontime: 24462 s
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | nevents: 400
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | neventsw: 0
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | pid: 3091413
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | pgrp: 3091413
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | corecount: 10
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | event service: False
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | sizes: {0: 2283949, 1: 2283949, 5: 2284239, 11: 2284295, 4576: 2310632, 4577: 2319630, 4579: 2319814, 4588: 2320008}
[2026-01-14 18:16:50] 2026-01-14 23:16:17,228 | INFO     | --------------------------------------------------
[2026-01-14 18:16:50] 2026-01-14 23:16:17,229 | INFO     | 
[2026-01-14 18:16:50] 2026-01-14 23:16:17,229 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-14 18:16:50] 2026-01-14 23:16:17,266 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,266 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,268 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 18:16:50] 2026-01-14 23:16:17,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,268 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 18:16:50] 2026-01-14 23:16:17,268 | INFO     | job 6969523800 has completed (purged errors)
[2026-01-14 18:16:50] 2026-01-14 23:16:17,268 | INFO     | overall cleanup function is called
[2026-01-14 18:16:50] 2026-01-14 23:16:18,280 | INFO     | --- collectZombieJob: --- 10, [3091413]
[2026-01-14 18:16:50] 2026-01-14 23:16:18,280 | INFO     | zombie collector waiting for pid 3091413
[2026-01-14 18:16:50] 2026-01-14 23:16:18,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 18:16:50] 2026-01-14 23:16:18,280 | INFO     | collected zombie processes
[2026-01-14 18:16:50] 2026-01-14 23:16:18,280 | INFO     | will attempt to kill all subprocesses of pid=3091413
[2026-01-14 18:16:50] 2026-01-14 23:16:18,971 | INFO     | process IDs to be killed: [3091413] (in reverse order)
[2026-01-14 18:16:50] 2026-01-14 23:16:19,149 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 18:16:50] 2026-01-14 23:16:19,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 18:16:50] 2026-01-14 23:16:19,174 | INFO     | did not find any defunct processes belonging to 3091413
[2026-01-14 18:16:50] 2026-01-14 23:16:19,186 | INFO     | did not find any defunct processes belonging to 3091413
[2026-01-14 18:16:50] 2026-01-14 23:16:19,186 | INFO     | ready for new job
[2026-01-14 18:16:50] 2026-01-14 23:16:19,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 18:16:50] 2026-01-14 23:16:19,188 | INFO     | ***************************************
[2026-01-14 18:16:50] 2026-01-14 23:16:19,188 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 18:16:50] 2026-01-14 23:16:19,188 | INFO     | ***************************************
[2026-01-14 18:16:50] 2026-01-14 23:16:19,189 | INFO     | 
[2026-01-14 18:16:50] 2026-01-14 23:16:19,191 | INFO     | architecture information:
[2026-01-14 18:16:50] 2026-01-14 23:16:19,192 | INFO     | executing command: cat /etc/os-release
[2026-01-14 18:16:50] 2026-01-14 23:16:19,234 | INFO     | cat /etc/os-release:
[2026-01-14 18:16:50] NAME="CentOS Linux"
[2026-01-14 18:16:50] VERSION="7 (Core)"
[2026-01-14 18:16:50] ID="centos"
[2026-01-14 18:16:50] ID_LIKE="rhel fedora"
[2026-01-14 18:16:50] VERSION_ID="7"
[2026-01-14 18:16:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 18:16:50] ANSI_COLOR="0;31"
[2026-01-14 18:16:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 18:16:50] HOME_URL="https://www.centos.org/"
[2026-01-14 18:16:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 18:16:50] 
[2026-01-14 18:16:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 18:16:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 18:16:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 18:16:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 18:16:50] 
[2026-01-14 18:16:50] 2026-01-14 23:16:19,235 | INFO     | ***************************************
[2026-01-14 18:16:50] 2026-01-14 23:16:19,738 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-14 18:16:50] 2026-01-14 23:16:19,765 | INFO     | sufficient remaining disk space (72829894656 B)
[2026-01-14 18:16:50] 2026-01-14 23:16:19,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 18:16:50] 2026-01-14 23:16:19,766 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 18:16:50] 2026-01-14 23:16:19,766 | INFO     | update_server=False
[2026-01-14 18:16:50] 2026-01-14 23:16:19,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 18:16:50] 2026-01-14 23:16:19,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 18:16:50] 2026-01-14 23:16:20,386 | INFO     | all data control threads have been joined
[2026-01-14 18:16:50] 2026-01-14 23:16:20,483 | INFO     | all payload control threads have been joined
[2026-01-14 18:16:50] 2026-01-14 23:16:20,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 18:16:50] 2026-01-14 23:16:20,530 | INFO     | aborting loop
[2026-01-14 18:16:50] 2026-01-14 23:16:20,772 | INFO     | [job] retrieve thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:21,030 | INFO     | [job] validate thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:21,059 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:21,270 | INFO     | all job control threads have been joined
[2026-01-14 18:16:50] 2026-01-14 23:16:21,402 | INFO     | [data] control thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:21,490 | INFO     | [payload] control thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:21,536 | INFO     | [job] job monitor thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:21,621 | INFO     | [payload] failed_post thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:21,678 | INFO     | [data] copytool_in thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:21,773 | INFO     | [data] copytool_out thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:22,031 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:22,179 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:22,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 18:16:50] 2026-01-14 23:16:22,276 | INFO     | [job] control thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:22,288 | INFO     | [payload] validate_post thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:22,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 18:16:50] 2026-01-14 23:16:23,229 | INFO     | [job] queue monitor thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:26,967 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:30,731 | INFO     | job.realtimelogging is not enabled
[2026-01-14 18:16:50] 2026-01-14 23:16:31,737 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 18:16:50] 2026-01-14 23:16:41,664 | INFO     | [monitor] cgroup control has ended
[2026-01-14 18:16:50] 2026-01-14 23:16:42,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014396933952)>', '<ExcThread(monitor, started 140013786363648)>']
[2026-01-14 18:16:50] 2026-01-14 23:16:47,916 | INFO     | all workflow threads have been joined
[2026-01-14 18:16:50] 2026-01-14 23:16:47,916 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 18:16:50] 2026-01-14 23:16:47,916 | INFO     | traces error code: 0
[2026-01-14 18:16:50] 2026-01-14 23:16:47,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 18:16:50] 2026-01-14 23:16:49,048 | INFO     | PID=3084068 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 18:16:50] 2026-01-14 23:16:49,049 | INFO     | .. there are 23 such processes running
[2026-01-14 18:16:50] 2026-01-14 23:16:49,049 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 18:16:50] 2026-01-14 23:16:49,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 18:16:50] 2026-01-14 23:16:49,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 18:16:50] 2026-01-14 23:16:49,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 18:16:50] 2026-01-14 23:16:49,049 | INFO     | [monitor] control thread has ended
[2026-01-14 18:16:50] 2026-01-14 23:16:49,577 [wrapper] ==== pilot stdout END ====
[2026-01-14 18:16:50] 2026-01-14 23:16:49,600 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 18:16:50] 2026-01-14 23:16:49,634 [wrapper] pilotpid: 3084068
[2026-01-14 18:16:50] 2026-01-14 23:16:49,661 [wrapper] Pilot exit status: 0
[2026-01-14 18:16:50] 2026-01-14 23:16:49,804 [wrapper] pandaids: 6969523800
[2026-01-14 18:16:50] 2026-01-14 23:16:49,999 [wrapper] cleanup supervisor_pilot 3401812 3084069
[2026-01-14 18:16:50] 2026-01-14 23:16:50,018 [wrapper] Test setup, not cleaning
[2026-01-14 18:16:50] 2026-01-14 23:16:50,033 [wrapper] apfmon messages muted
[2026-01-14 18:16:50] 2026-01-14 23:16:50,102 [wrapper] ==== wrapper stdout END ====
[2026-01-14 18:16:50] 2026-01-14 23:16:50,121 [wrapper] ==== wrapper stderr END ====
[2026-01-14 18:16:50]  *** Error codes and diagnostics ***
[2026-01-14 18:16:50]     "exeErrorCode": 0,
[2026-01-14 18:16:50]     "exeErrorDiag": "",
[2026-01-14 18:16:50]     "pilotErrorCode": 0,
[2026-01-14 18:16:50]     "pilotErrorDiag": "",
[2026-01-14 18:16:50]  *** Listing of results directory ***
[2026-01-14 18:16:50] total 732792
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 11:41 queuedata.json
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 11:41 pilot3.tar.gz
[2026-01-14 18:16:50] -rwx------. 1 boincer umatlas     36322 Jan 14 11:41 runpilot2-wrapper.sh
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas       100 Jan 14 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 18:16:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 16:59 run_atlas
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas       105 Jan 14 16:59 job.xml
[2026-01-14 18:16:50] -rw-r--r--. 2 boincer umatlas 593424165 Jan 14 16:59 EVNT.32794306._001127.pool.root.1
[2026-01-14 18:16:50] -rw-r--r--. 2 boincer umatlas    592396 Jan 14 16:59 input.tar.gz
[2026-01-14 18:16:50] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 16:59 start_atlas.sh
[2026-01-14 18:16:50] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 16:59 shared
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas         0 Jan 14 16:59 boinc_lockfile
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas      2507 Jan 14 16:59 pandaJob.out
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas        57 Jan 14 16:59 setup.sh.local
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas    999596 Jan 14 16:59 agis_schedconf.cvmfs.json
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas   1516246 Jan 14 16:59 agis_ddmendpoints.agis.ALL.json
[2026-01-14 18:16:50] drwx------. 5 boincer umatlas      4096 Jan 14 16:59 pilot3
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas      6842 Jan 14 18:12 init_data.xml
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas       530 Jan 14 18:15 boinc_task_state.xml
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas 151026078 Jan 14 18:15 HITS.48215263._028145.pool.root.1
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas        95 Jan 14 18:15 pilot_heartbeat.json
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas      1041 Jan 14 18:16 memory_monitor_summary.json
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas    341708 Jan 14 18:16 log.48215263._028145.job.log.tgz.1
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas      7826 Jan 14 18:16 heartbeat.json
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 18:16 boinc_mmap_file
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas        27 Jan 14 18:16 wrapper_checkpoint.txt
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas       823 Jan 14 18:16 pilotlog.txt
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas    658190 Jan 14 18:16 log.48215263._028145.job.log.1
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas       357 Jan 14 18:16 output.list
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas       620 Jan 14 18:16 runtime_log
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas   1024000 Jan 14 18:16 result.tar.gz
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas      9349 Jan 14 18:16 runtime_log.err
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas       653 Jan 14 18:16 2CzKDm16I08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtclKDmVUnJ2n.diag
[2026-01-14 18:16:50] -rw-r--r--. 1 boincer umatlas     22457 Jan 14 18:16 stderr.txt
[2026-01-14 18:16:50] HITS file was successfully produced:
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas 151026078 Jan 14 18:15 shared/HITS.pool.root.1
[2026-01-14 18:16:50]  *** Contents of shared directory: ***
[2026-01-14 18:16:50] total 728608
[2026-01-14 18:16:50] -rw-r--r--. 2 boincer umatlas 593424165 Jan 14 16:59 ATLAS.root_0
[2026-01-14 18:16:50] -rw-r--r--. 2 boincer umatlas    592396 Jan 14 16:59 input.tar.gz
[2026-01-14 18:16:50] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 16:59 start_atlas.sh
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas 151026078 Jan 14 18:15 HITS.pool.root.1
[2026-01-14 18:16:50] -rw-------. 1 boincer umatlas   1024000 Jan 14 18:16 result.tar.gz
18:16:52 (3079712): run_atlas exited; CPU time 24545.169046
18:16:52 (3079712): called boinc_finish(0)

</stderr_txt>
]]>

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