Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:53:16 (1624734): wrapper (7.7.26015): starting
23:53:16 (1624734): wrapper: running run_atlas (--nthreads 3)
[2026-01-14 23:53:16] Arguments: --nthreads 3
[2026-01-14 23:53:16] Threads: 3
[2026-01-14 23:53:16] Checking for CVMFS
[2026-01-14 23:53:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 23:53:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 23:53:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 23:53:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 23:53:16] 2.9.2.0 1053361 1396 81212 155147 2 57 22815063 36864001 0 130560 0 1505979 99.992 55243 26156 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 23:53:16] CVMFS is ok
[2026-01-14 23:53:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 23:53:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 23:53:16] Further information can be found at the LHC@home message board.
[2026-01-14 23:53:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 23:53:16] Checking for apptainer binary...
[2026-01-14 23:53:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 23:53:16] Running /usr/bin/apptainer --version
[2026-01-14 23:53:16] apptainer version 1.4.1-1.1
[2026-01-14 23:53:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 23:53:16] magicA246a
[2026-01-14 23:53:16] apptainer works
[2026-01-14 23:53:16] Set ATHENA_PROC_NUMBER=3
[2026-01-14 23:53:16] Set ATHENA_CORE_NUMBER=3
[2026-01-14 23:53:16] Starting ATLAS job with PandaID=6969522032
[2026-01-14 23:53:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 00:49:31]  *** The last 200 lines of the pilot log: ***
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | job 6969522032 has completed (purged errors)
[2026-01-15 00:49:31] 2026-01-14 23:48:48,858 | INFO     | overall cleanup function is called
[2026-01-15 00:49:31] 2026-01-14 23:48:49,862 | INFO     | --- collectZombieJob: --- 10, [1634905]
[2026-01-15 00:49:31] 2026-01-14 23:48:49,862 | INFO     | zombie collector waiting for pid 1634905
[2026-01-15 00:49:31] 2026-01-14 23:48:49,862 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 00:49:31] 2026-01-14 23:48:49,862 | INFO     | collected zombie processes
[2026-01-15 00:49:31] 2026-01-14 23:48:49,862 | INFO     | will attempt to kill all subprocesses of pid=1634905
[2026-01-15 00:49:31] 2026-01-14 23:48:49,919 | INFO     | process IDs to be killed: [1634905] (in reverse order)
[2026-01-15 00:49:31] 2026-01-14 23:48:49,947 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 00:49:31] 2026-01-14 23:48:49,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 00:49:31] 2026-01-14 23:48:49,949 | INFO     | did not find any defunct processes belonging to 1634905
[2026-01-15 00:49:31] 2026-01-14 23:48:49,951 | INFO     | did not find any defunct processes belonging to 1634905
[2026-01-15 00:49:31] 2026-01-14 23:48:49,951 | INFO     | ready for new job
[2026-01-15 00:49:31] 2026-01-14 23:48:49,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 00:49:31] 2026-01-14 23:48:49,952 | INFO     | ***************************************
[2026-01-15 00:49:31] 2026-01-14 23:48:49,952 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 00:49:31] 2026-01-14 23:48:49,952 | INFO     | ***************************************
[2026-01-15 00:49:31] 2026-01-14 23:48:49,952 | INFO     | 
[2026-01-15 00:49:31] 2026-01-14 23:48:49,952 | INFO     | architecture information:
[2026-01-15 00:49:31] 2026-01-14 23:48:49,952 | INFO     | executing command: cat /etc/os-release
[2026-01-15 00:49:31] 2026-01-14 23:48:49,961 | INFO     | cat /etc/os-release:
[2026-01-15 00:49:31] NAME="CentOS Linux"
[2026-01-15 00:49:31] VERSION="7 (Core)"
[2026-01-15 00:49:31] ID="centos"
[2026-01-15 00:49:31] ID_LIKE="rhel fedora"
[2026-01-15 00:49:31] VERSION_ID="7"
[2026-01-15 00:49:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 00:49:31] ANSI_COLOR="0;31"
[2026-01-15 00:49:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 00:49:31] HOME_URL="https://www.centos.org/"
[2026-01-15 00:49:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 00:49:31] 
[2026-01-15 00:49:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 00:49:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 00:49:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 00:49:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 00:49:31] 
[2026-01-15 00:49:31] 2026-01-14 23:48:49,962 | INFO     | ***************************************
[2026-01-15 00:49:31] 2026-01-14 23:48:50,465 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 00:49:31] 2026-01-14 23:48:50,476 | INFO     | sufficient remaining disk space (281529024512 B)
[2026-01-15 00:49:31] 2026-01-14 23:48:50,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 00:49:31] 2026-01-14 23:48:50,476 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 00:49:31] 2026-01-14 23:48:50,477 | INFO     | update_server=False
[2026-01-15 00:49:31] 2026-01-14 23:48:50,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 00:49:31] 2026-01-14 23:48:50,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 00:49:31] 2026-01-14 23:48:50,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 00:49:31] 2026-01-14 23:48:50,855 | INFO     | all data control threads have been joined
[2026-01-15 00:49:31] 2026-01-14 23:48:50,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 00:49:31] 2026-01-14 23:48:50,988 | INFO     | aborting loop
[2026-01-15 00:49:31] 2026-01-14 23:48:51,056 | INFO     | all job control threads have been joined
[2026-01-15 00:49:31] 2026-01-14 23:48:51,481 | INFO     | [job] queue monitor thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:51,482 | INFO     | [job] retrieve thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:51,484 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:51,676 | INFO     | all payload control threads have been joined
[2026-01-15 00:49:31] 2026-01-14 23:48:51,860 | INFO     | [data] control thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:51,931 | INFO     | [payload] failed_post thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:51,994 | INFO     | [job] job monitor thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:52,062 | INFO     | [job] control thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:52,186 | INFO     | [data] copytool_in thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:52,476 | INFO     | [payload] validate_post thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:52,481 | INFO     | [data] copytool_out thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:52,642 | INFO     | [job] validate thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:52,675 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:52,682 | INFO     | [payload] control thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:52,761 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:48:53,109 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 00:49:31] 2026-01-14 23:48:57,113 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:49:01,242 | INFO     | job.realtimelogging is not enabled
[2026-01-15 00:49:31] 2026-01-14 23:49:02,247 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 00:49:31] 2026-01-14 23:49:20,761 | INFO     | PID=1628462 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 00:49:31] 2026-01-14 23:49:20,761 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 00:49:31] 2026-01-14 23:49:20,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 00:49:31] 2026-01-14 23:49:20,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 00:49:31] 2026-01-14 23:49:25,068 | INFO     | [monitor] cgroup control has ended
[2026-01-15 00:49:31] 2026-01-14 23:49:26,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816773445440)>', '<ExcThread(monitor, started 139816142366464)>']
[2026-01-15 00:49:31] 2026-01-14 23:49:26,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 00:49:31] 2026-01-14 23:49:26,792 | INFO     | [monitor] control thread has ended
[2026-01-15 00:49:31] 2026-01-14 23:49:31,745 | INFO     | all workflow threads have been joined
[2026-01-15 00:49:31] 2026-01-14 23:49:31,746 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 00:49:31] 2026-01-14 23:49:31,746 | INFO     | traces error code: 0
[2026-01-15 00:49:31] 2026-01-14 23:49:31,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 00:49:31] 2026-01-14 23:49:31,799 [wrapper] ==== pilot stdout END ====
[2026-01-15 00:49:31] 2026-01-14 23:49:31,801 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 00:49:31] 2026-01-14 23:49:31,804 [wrapper] pilotpid: 1628462
[2026-01-15 00:49:31] 2026-01-14 23:49:31,806 [wrapper] Pilot exit status: 0
[2026-01-15 00:49:31] 2026-01-14 23:49:31,813 [wrapper] pandaids: 6969522032
[2026-01-15 00:49:31] 2026-01-14 23:49:31,833 [wrapper] cleanup supervisor_pilot 1644964 1628463
[2026-01-15 00:49:31] 2026-01-14 23:49:31,835 [wrapper] Test setup, not cleaning
[2026-01-15 00:49:31] 2026-01-14 23:49:31,837 [wrapper] apfmon messages muted
[2026-01-15 00:49:31] 2026-01-14 23:49:31,840 [wrapper] ==== wrapper stdout END ====
[2026-01-15 00:49:31] 2026-01-14 23:49:31,842 [wrapper] ==== wrapper stderr END ====
[2026-01-15 00:49:31]  *** Error codes and diagnostics ***
[2026-01-15 00:49:31]     "exeErrorCode": 0,
[2026-01-15 00:49:31]     "exeErrorDiag": "",
[2026-01-15 00:49:31]     "pilotErrorCode": 0,
[2026-01-15 00:49:31]     "pilotErrorDiag": "",
[2026-01-15 00:49:31]  *** Listing of results directory ***
[2026-01-15 00:49:31] total 743592
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc    579449 Jan 14 16:23 pilot3.tar.gz
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc      5112 Jan 14 16:32 queuedata.json
[2026-01-15 00:49:31] -rwx------ 1 boinc boinc     36322 Jan 14 16:32 runpilot2-wrapper.sh
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc       100 Jan 14 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 00:49:31] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 23:53 run_atlas
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc       105 Jan 14 23:53 job.xml
[2026-01-15 00:49:31] -rw-r--r-- 2 boinc boinc 601143072 Jan 14 23:53 EVNT.32794306._001103.pool.root.1
[2026-01-15 00:49:31] -rw-r--r-- 2 boinc boinc    592402 Jan 14 23:53 input.tar.gz
[2026-01-15 00:49:31] -rw-r--r-- 2 boinc boinc     15847 Jan 14 23:53 start_atlas.sh
[2026-01-15 00:49:31] drwxrwx--x 2 boinc boinc      4096 Jan 14 23:53 shared
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc         0 Jan 14 23:53 boinc_setup_complete
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc      6447 Jan 14 23:53 init_data.xml
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc         0 Jan 14 23:53 boinc_lockfile
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc      2507 Jan 14 23:53 pandaJob.out
[2026-01-15 00:49:31] -rw------- 1 boinc boinc    999472 Jan 14 23:53 agis_schedconf.cvmfs.json
[2026-01-15 00:49:31] -rw------- 1 boinc boinc   1516246 Jan 14 23:53 agis_ddmendpoints.agis.ALL.json
[2026-01-15 00:49:31] drwx------ 5 boinc boinc      4096 Jan 14 23:53 pilot3
[2026-01-15 00:49:31] -rw------- 1 boinc boinc 154928947 Jan 15 00:48 HITS.48215263._027543.pool.root.1
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc       529 Jan 15 00:48 boinc_task_state.xml
[2026-01-15 00:49:31] -rw------- 1 boinc boinc      1019 Jan 15 00:48 memory_monitor_summary.json
[2026-01-15 00:49:31] -rw------- 1 boinc boinc        95 Jan 15 00:48 pilot_heartbeat.json
[2026-01-15 00:49:31] -rw------- 1 boinc boinc    216947 Jan 15 00:48 log.48215263._027543.job.log.tgz.1
[2026-01-15 00:49:31] -rw------- 1 boinc boinc      7747 Jan 15 00:48 heartbeat.json
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc        26 Jan 15 00:49 wrapper_checkpoint.txt
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc      8192 Jan 15 00:49 boinc_mmap_file
[2026-01-15 00:49:31] -rw------- 1 boinc boinc      4824 Jan 15 00:49 pilotlog.txt
[2026-01-15 00:49:31] -rw------- 1 boinc boinc    506793 Jan 15 00:49 log.48215263._027543.job.log.1
[2026-01-15 00:49:31] -rw------- 1 boinc boinc       357 Jan 15 00:49 output.list
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc       620 Jan 15 00:49 runtime_log
[2026-01-15 00:49:31] -rw------- 1 boinc boinc    747520 Jan 15 00:49 result.tar.gz
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc      8917 Jan 15 00:49 runtime_log.err
[2026-01-15 00:49:31] -rw------- 1 boinc boinc       660 Jan 15 00:49 JsENDmZ2H08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQclKDmcXVOOn.diag
[2026-01-15 00:49:31] -rw-r--r-- 1 boinc boinc     12032 Jan 15 00:49 stderr.txt
[2026-01-15 00:49:31] HITS file was successfully produced:
[2026-01-15 00:49:31] -rw------- 1 boinc boinc 154928947 Jan 15 00:48 shared/HITS.pool.root.1
[2026-01-15 00:49:31]  *** Contents of shared directory: ***
[2026-01-15 00:49:31] total 739692
[2026-01-15 00:49:31] -rw-r--r-- 2 boinc boinc 601143072 Jan 14 23:53 ATLAS.root_0
[2026-01-15 00:49:31] -rw-r--r-- 2 boinc boinc    592402 Jan 14 23:53 input.tar.gz
[2026-01-15 00:49:31] -rw-r--r-- 2 boinc boinc     15847 Jan 14 23:53 start_atlas.sh
[2026-01-15 00:49:31] -rw------- 1 boinc boinc 154928947 Jan 15 00:48 HITS.pool.root.1
[2026-01-15 00:49:31] -rw------- 1 boinc boinc    747520 Jan 15 00:49 result.tar.gz
00:49:32 (1624734): run_atlas exited; CPU time 9368.607232
00:49:32 (1624734): called boinc_finish(0)

</stderr_txt>
]]>

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