Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:34:05 (30917): wrapper (7.7.26015): starting
15:34:05 (30917): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 15:34:05] Arguments: --nthreads 8
[2026-01-14 15:34:05] Threads: 8
[2026-01-14 15:34:05] Checking for CVMFS
[2026-01-14 15:34:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 15:34:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 15:34:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 15:34:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 15:34:05] 2.11.2.0 8318 188795 131468 155143 1 57 14124298 18432001 1833 130560 0 126276762 99.979 7454835 31690 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 15:34:05] CVMFS is ok
[2026-01-14 15:34:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 15:34:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 15:34:05] Further information can be found at the LHC@home message board.
[2026-01-14 15:34:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 15:34:05] Checking for apptainer binary...
[2026-01-14 15:34:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 15:34:05] Running /usr/bin/apptainer --version
[2026-01-14 15:34:05] apptainer version 1.3.2-1.el7
[2026-01-14 15:34:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 15:34:06] c-206-28.aglt2.org
[2026-01-14 15:34:06] apptainer works
[2026-01-14 15:34:06] Set ATHENA_PROC_NUMBER=8
[2026-01-14 15:34:06] Set ATHENA_CORE_NUMBER=8
[2026-01-14 15:34:06] Starting ATLAS job with PandaID=6969519238
[2026-01-14 15:34:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 17:30:34]  *** The last 200 lines of the pilot log: ***
[2026-01-14 17:30:34] 2026-01-14 22:29:23,555 | INFO     | total number of processed events: 400 (read)
[2026-01-14 17:30:34] 2026-01-14 22:29:23,555 | INFO     | executing command: lscpu
[2026-01-14 17:30:34] 2026-01-14 22:29:23,588 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 17:30:34] 2026-01-14 22:29:24,515 | INFO     | monitor loop #505: job 0:6969519238 is in state 'finished'
[2026-01-14 17:30:34] 2026-01-14 22:29:24,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:30:34] 2026-01-14 22:29:24,702 | INFO     | time since job start (6907s) is within the limit (349056.0s)
[2026-01-14 17:30:34] 2026-01-14 22:29:26,707 | INFO     | time since job start (6909s) is within the limit (349056.0s)
[2026-01-14 17:30:34] 2026-01-14 22:29:26,934 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 17:30:34] 2026-01-14 22:29:26,940 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2450.1666666666665
[2026-01-14 17:30:34] 2026-01-14 22:29:26,945 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969519238/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 17:30:34] 2026-01-14 22:29:26,945 | INFO     | extracted standard info from prmon json
[2026-01-14 17:30:34] 2026-01-14 22:29:26,946 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 17:30:34] 2026-01-14 22:29:26,946 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 17:30:34] 2026-01-14 22:29:26,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 17:30:34] 2026-01-14 22:29:26,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 17:30:34] 2026-01-14 22:29:26,949 | INFO     | fitting pss+swap vs Time
[2026-01-14 17:30:34] 2026-01-14 22:29:26,949 | INFO     | sum of square deviations: 447383272.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,949 | INFO     | sum of deviations: 7058506115.000002
[2026-01-14 17:30:34] 2026-01-14 22:29:26,950 | INFO     | mean x: 1768426298.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,950 | INFO     | mean y: 2527252.7699115044
[2026-01-14 17:30:34] 2026-01-14 22:29:26,950 | INFO     | intersect: -27898488765.45934
[2026-01-14 17:30:34] 2026-01-14 22:29:26,950 | INFO     | chi2: 1.5350364098403495
[2026-01-14 17:30:34] 2026-01-14 22:29:26,950 | INFO     | sum of square deviations: 390582207.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,951 | INFO     | sum of deviations: 6980283008.999999
[2026-01-14 17:30:34] 2026-01-14 22:29:26,951 | INFO     | mean x: 1768426145.5
[2026-01-14 17:30:34] 2026-01-14 22:29:26,951 | INFO     | mean y: 2527042.685185185
[2026-01-14 17:30:34] 2026-01-14 22:29:26,951 | INFO     | intersect: -31601869560.319855
[2026-01-14 17:30:34] 2026-01-14 22:29:26,951 | INFO     | chi2: 1.5379028384035087
[2026-01-14 17:30:34] 2026-01-14 22:29:26,951 | INFO     | current chi2=1.5379028384035087 (change=-0.18673358786697047 %)
[2026-01-14 17:30:34] 2026-01-14 22:29:26,951 | INFO     | right removable region: 107
[2026-01-14 17:30:34] 2026-01-14 22:29:26,952 | INFO     | sum of square deviations: 390582207.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,952 | INFO     | sum of deviations: -11028600957.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,952 | INFO     | mean x: 1768426450.5
[2026-01-14 17:30:34] 2026-01-14 22:29:26,952 | INFO     | mean y: 2574955.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,952 | INFO     | intersect: 49936415500.80964
[2026-01-14 17:30:34] 2026-01-14 22:29:26,953 | INFO     | chi2: 0.04045781139073323
[2026-01-14 17:30:34] 2026-01-14 22:29:26,953 | INFO     | current chi2=0.04045781139073323 (change=97.36437447793561 %)
[2026-01-14 17:30:34] 2026-01-14 22:29:26,953 | INFO     | sum of square deviations: 338804492.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,953 | INFO     | sum of deviations: -10180179102.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,953 | INFO     | mean x: 1768426603.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,954 | INFO     | mean y: 2572413.155339806
[2026-01-14 17:30:34] 2026-01-14 22:29:26,954 | INFO     | intersect: 53139115677.408905
[2026-01-14 17:30:34] 2026-01-14 22:29:26,954 | INFO     | chi2: 0.03830597506812211
[2026-01-14 17:30:34] 2026-01-14 22:29:26,954 | INFO     | current chi2=0.03830597506812211 (change=5.318716580660093 %)
[2026-01-14 17:30:34] 2026-01-14 22:29:26,954 | INFO     | left removable region: 20
[2026-01-14 17:30:34] 2026-01-14 22:29:26,954 | INFO     | sum of square deviations: 204163828.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,955 | INFO     | sum of deviations: -6330666010.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,955 | INFO     | mean x: 1768426725.0
[2026-01-14 17:30:34] 2026-01-14 22:29:26,955 | INFO     | mean y: 2562932.8620689656
[2026-01-14 17:30:34] 2026-01-14 22:29:26,955 | INFO     | intersect: 54837540650.52672
[2026-01-14 17:30:34] 2026-01-14 22:29:26,955 | INFO     | chi2: 0.03497076565160568
[2026-01-14 17:30:34] 2026-01-14 22:29:26,955 | INFO     | current memory leak: -31.01 B/s (using 87 data points, chi2=0.03)
[2026-01-14 17:30:34] 2026-01-14 22:29:26,956 | INFO     | could have reported an average CPU frequency of 2518 MHz (7 samples)
[2026-01-14 17:30:34] 2026-01-14 22:29:26,956 | INFO     | ..............................
[2026-01-14 17:30:34] 2026-01-14 22:29:26,956 | INFO     | . Timing measurements:
[2026-01-14 17:30:34] 2026-01-14 22:29:26,956 | INFO     | . get job = 0 s
[2026-01-14 17:30:34] 2026-01-14 22:29:26,956 | INFO     | . initial setup = 2 s
[2026-01-14 17:30:34] 2026-01-14 22:29:26,956 | INFO     | . payload setup = 4 s
[2026-01-14 17:30:34] 2026-01-14 22:29:26,956 | INFO     | . stage-in = 0 s
[2026-01-14 17:30:34] 2026-01-14 22:29:26,956 | INFO     | . payload execution = 6879 s
[2026-01-14 17:30:34] 2026-01-14 22:29:26,956 | INFO     | . stage-out = 1 s
[2026-01-14 17:30:34] 2026-01-14 22:29:26,957 | INFO     | . log creation = 0 s
[2026-01-14 17:30:34] 2026-01-14 22:29:26,957 | INFO     | ..............................
[2026-01-14 17:30:34] 2026-01-14 22:29:27,031 | INFO     | 
[2026-01-14 17:30:34] 2026-01-14 22:29:27,031 | INFO     | job summary report
[2026-01-14 17:30:34] 2026-01-14 22:29:27,031 | INFO     | --------------------------------------------------
[2026-01-14 17:30:34] 2026-01-14 22:29:27,031 | INFO     | PanDA job id: 6969519238
[2026-01-14 17:30:34] 2026-01-14 22:29:27,031 | INFO     | task id: 48215263
[2026-01-14 17:30:34] 2026-01-14 22:29:27,032 | INFO     | errors: (none)
[2026-01-14 17:30:34] 2026-01-14 22:29:27,032 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 17:30:34] 2026-01-14 22:29:27,032 | INFO     | pilot state: finished 
[2026-01-14 17:30:34] 2026-01-14 22:29:27,032 | INFO     | transexitcode: 0
[2026-01-14 17:30:34] 2026-01-14 22:29:27,032 | INFO     | exeerrorcode: 0
[2026-01-14 17:30:34] 2026-01-14 22:29:27,032 | INFO     | exeerrordiag: 
[2026-01-14 17:30:34] 2026-01-14 22:29:27,032 | INFO     | exitcode: 0
[2026-01-14 17:30:34] 2026-01-14 22:29:27,032 | INFO     | exitmsg: OK
[2026-01-14 17:30:34] 2026-01-14 22:29:27,032 | INFO     | cpuconsumptiontime: 51282 s
[2026-01-14 17:30:34] 2026-01-14 22:29:27,032 | INFO     | nevents: 400
[2026-01-14 17:30:34] 2026-01-14 22:29:27,033 | INFO     | neventsw: 0
[2026-01-14 17:30:34] 2026-01-14 22:29:27,033 | INFO     | pid: 8736
[2026-01-14 17:30:34] 2026-01-14 22:29:27,033 | INFO     | pgrp: 8736
[2026-01-14 17:30:34] 2026-01-14 22:29:27,033 | INFO     | corecount: 8
[2026-01-14 17:30:34] 2026-01-14 22:29:27,033 | INFO     | event service: False
[2026-01-14 17:30:34] 2026-01-14 22:29:27,033 | INFO     | sizes: {0: 2283780, 1: 2283979, 4: 2284241, 11: 2284269, 6887: 2311555, 6889: 2320737, 6894: 2320875}
[2026-01-14 17:30:34] 2026-01-14 22:29:27,033 | INFO     | --------------------------------------------------
[2026-01-14 17:30:34] 2026-01-14 22:29:27,033 | INFO     | 
[2026-01-14 17:30:34] 2026-01-14 22:29:27,033 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-14 17:30:34] 2026-01-14 22:29:27,051 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,051 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,052 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,052 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,053 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 17:30:34] 2026-01-14 22:29:27,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,053 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 17:30:34] 2026-01-14 22:29:27,054 | INFO     | job 6969519238 has completed (purged errors)
[2026-01-14 17:30:34] 2026-01-14 22:29:27,054 | INFO     | overall cleanup function is called
[2026-01-14 17:30:34] 2026-01-14 22:29:27,886 | INFO     | PID=2218 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 17:30:34] 2026-01-14 22:29:27,886 | INFO     | .. there are 3 such processes running
[2026-01-14 17:30:34] 2026-01-14 22:29:28,061 | INFO     | --- collectZombieJob: --- 10, [8736]
[2026-01-14 17:30:34] 2026-01-14 22:29:28,061 | INFO     | zombie collector waiting for pid 8736
[2026-01-14 17:30:34] 2026-01-14 22:29:28,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 17:30:34] 2026-01-14 22:29:28,061 | INFO     | collected zombie processes
[2026-01-14 17:30:34] 2026-01-14 22:29:28,062 | INFO     | will attempt to kill all subprocesses of pid=8736
[2026-01-14 17:30:34] 2026-01-14 22:29:28,191 | INFO     | process IDs to be killed: [8736] (in reverse order)
[2026-01-14 17:30:34] 2026-01-14 22:29:28,247 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 17:30:34] 2026-01-14 22:29:28,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 17:30:34] 2026-01-14 22:29:28,251 | INFO     | did not find any defunct processes belonging to 8736
[2026-01-14 17:30:34] 2026-01-14 22:29:28,253 | INFO     | did not find any defunct processes belonging to 8736
[2026-01-14 17:30:34] 2026-01-14 22:29:28,253 | INFO     | ready for new job
[2026-01-14 17:30:34] 2026-01-14 22:29:28,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 17:30:34] 2026-01-14 22:29:28,255 | INFO     | ***************************************
[2026-01-14 17:30:34] 2026-01-14 22:29:28,255 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 17:30:34] 2026-01-14 22:29:28,255 | INFO     | ***************************************
[2026-01-14 17:30:34] 2026-01-14 22:29:28,255 | INFO     | 
[2026-01-14 17:30:34] 2026-01-14 22:29:28,256 | INFO     | architecture information:
[2026-01-14 17:30:34] 2026-01-14 22:29:28,256 | INFO     | executing command: cat /etc/os-release
[2026-01-14 17:30:34] 2026-01-14 22:29:28,268 | INFO     | cat /etc/os-release:
[2026-01-14 17:30:34] NAME="CentOS Linux"
[2026-01-14 17:30:34] VERSION="7 (Core)"
[2026-01-14 17:30:34] ID="centos"
[2026-01-14 17:30:34] ID_LIKE="rhel fedora"
[2026-01-14 17:30:34] VERSION_ID="7"
[2026-01-14 17:30:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 17:30:34] ANSI_COLOR="0;31"
[2026-01-14 17:30:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 17:30:34] HOME_URL="https://www.centos.org/"
[2026-01-14 17:30:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 17:30:34] 
[2026-01-14 17:30:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 17:30:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 17:30:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 17:30:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 17:30:34] 
[2026-01-14 17:30:34] 2026-01-14 22:29:28,268 | INFO     | ***************************************
[2026-01-14 17:30:34] 2026-01-14 22:29:28,769 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-14 17:30:34] 2026-01-14 22:29:28,784 | INFO     | sufficient remaining disk space (25966936064 B)
[2026-01-14 17:30:34] 2026-01-14 22:29:28,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 17:30:34] 2026-01-14 22:29:28,784 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 17:30:34] 2026-01-14 22:29:28,784 | INFO     | update_server=False
[2026-01-14 17:30:34] 2026-01-14 22:29:28,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 17:30:34] 2026-01-14 22:29:28,785 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-14 17:30:34] 2026-01-14 22:29:28,785 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 17:30:34] 2026-01-14 22:29:28,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 17:30:34] 2026-01-14 22:29:28,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 17:30:34] 2026-01-14 22:29:28,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 17:30:34] 2026-01-14 22:29:28,786 | INFO     | aborting loop
[2026-01-14 17:30:34] 2026-01-14 22:29:28,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 17:30:34] 2026-01-14 22:29:29,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 17:30:34] 2026-01-14 22:29:29,544 | INFO     | all data control threads have been joined
[2026-01-14 17:30:34] 2026-01-14 22:29:29,790 | INFO     | [job] retrieve thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:29,792 | INFO     | [job] job monitor thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:29,792 | INFO     | [job] queue monitor thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:29,946 | INFO     | all job control threads have been joined
[2026-01-14 17:30:34] 2026-01-14 22:29:29,953 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:29,984 | INFO     | [data] copytool_in thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:30,066 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:30,236 | INFO     | [job] validate thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:30,240 | INFO     | all payload control threads have been joined
[2026-01-14 17:30:34] 2026-01-14 22:29:30,550 | INFO     | [data] control thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:30,625 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:30,695 | INFO     | [payload] validate_post thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:30,713 | INFO     | [payload] failed_post thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:30,951 | INFO     | [job] control thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:31,245 | INFO     | [payload] control thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:31,526 | INFO     | [data] copytool_out thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:32,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 17:30:34] 2026-01-14 22:29:36,169 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:29:39,490 | INFO     | job.realtimelogging is not enabled
[2026-01-14 17:30:34] 2026-01-14 22:29:40,495 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 17:30:34] 2026-01-14 22:30:28,560 | INFO     | [monitor] cgroup control has ended
[2026-01-14 17:30:34] 2026-01-14 22:30:28,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140632357648192)>', '<ExcThread(monitor, started 140631775106816)>']
[2026-01-14 17:30:34] 2026-01-14 22:30:29,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 17:30:34] 2026-01-14 22:30:29,071 | INFO     | [monitor] control thread has ended
[2026-01-14 17:30:34] 2026-01-14 22:30:33,963 | INFO     | all workflow threads have been joined
[2026-01-14 17:30:34] 2026-01-14 22:30:33,964 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 17:30:34] 2026-01-14 22:30:33,964 | INFO     | traces error code: 0
[2026-01-14 17:30:34] 2026-01-14 22:30:33,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 17:30:34] 2026-01-14 22:30:34,075 [wrapper] ==== pilot stdout END ====
[2026-01-14 17:30:34] 2026-01-14 22:30:34,078 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 17:30:34] 2026-01-14 22:30:34,080 [wrapper] pilotpid: 2218
[2026-01-14 17:30:34] 2026-01-14 22:30:34,082 [wrapper] Pilot exit status: 0
[2026-01-14 17:30:34] 2026-01-14 22:30:34,092 [wrapper] pandaids: 6969519238
[2026-01-14 17:30:34] 2026-01-14 22:30:34,128 [wrapper] cleanup supervisor_pilot 29106 2219
[2026-01-14 17:30:34] 2026-01-14 22:30:34,130 [wrapper] Test setup, not cleaning
[2026-01-14 17:30:34] 2026-01-14 22:30:34,132 [wrapper] apfmon messages muted
[2026-01-14 17:30:34] 2026-01-14 22:30:34,134 [wrapper] ==== wrapper stdout END ====
[2026-01-14 17:30:34] 2026-01-14 22:30:34,136 [wrapper] ==== wrapper stderr END ====
[2026-01-14 17:30:34]  *** Error codes and diagnostics ***
[2026-01-14 17:30:34]     "exeErrorCode": 0,
[2026-01-14 17:30:34]     "exeErrorDiag": "",
[2026-01-14 17:30:34]     "pilotErrorCode": 0,
[2026-01-14 17:30:34]     "pilotErrorDiag": "",
[2026-01-14 17:30:34]  *** Listing of results directory ***
[2026-01-14 17:30:34] total 734448
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 10:23 pilot3.tar.gz
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 10:25 queuedata.json
[2026-01-14 17:30:34] -rwx------ 1 boincer umatlas     36322 Jan 14 10:25 runpilot2-wrapper.sh
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas       100 Jan 14 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 17:30:34] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 15:33 run_atlas
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas       105 Jan 14 15:33 job.xml
[2026-01-14 17:30:34] -rw-r--r-- 2 boincer umatlas 591884466 Jan 14 15:34 EVNT.32794306._001072.pool.root.1
[2026-01-14 17:30:34] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 15:34 start_atlas.sh
[2026-01-14 17:30:34] drwxrwx--x 2 boincer umatlas      4096 Jan 14 15:34 shared
[2026-01-14 17:30:34] -rw-r--r-- 2 boincer umatlas    592396 Jan 14 15:34 input.tar.gz
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas         0 Jan 14 15:34 boinc_lockfile
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas      2508 Jan 14 15:34 pandaJob.out
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas        57 Jan 14 15:34 setup.sh.local
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas    999596 Jan 14 15:34 agis_schedconf.cvmfs.json
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas   1516246 Jan 14 15:34 agis_ddmendpoints.agis.ALL.json
[2026-01-14 17:30:34] drwx------ 5 boincer umatlas      4096 Jan 14 15:34 pilot3
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas        95 Jan 14 17:28 pilot_heartbeat.json
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas      5951 Jan 14 17:28 init_data.xml
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas 153566706 Jan 14 17:28 HITS.48215263._026777.pool.root.1
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas       530 Jan 14 17:29 boinc_task_state.xml
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas      1054 Jan 14 17:29 memory_monitor_summary.json
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas    357513 Jan 14 17:29 log.48215263._026777.job.log.tgz.1
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas      7853 Jan 14 17:29 heartbeat.json
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 17:30 boinc_mmap_file
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas        27 Jan 14 17:30 wrapper_checkpoint.txt
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas      4624 Jan 14 17:30 pilotlog.txt
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas    988294 Jan 14 17:30 log.48215263._026777.job.log.1
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas       357 Jan 14 17:30 output.list
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas       620 Jan 14 17:30 runtime_log
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas   1361920 Jan 14 17:30 result.tar.gz
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas      9342 Jan 14 17:30 runtime_log.err
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas       658 Jan 14 17:30 BsIMDm3vH08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqTlKDmtiJzkm.diag
[2026-01-14 17:30:34] -rw-r--r-- 1 boincer umatlas     21286 Jan 14 17:30 stderr.txt
[2026-01-14 17:30:34] HITS file was successfully produced:
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas 153566706 Jan 14 17:28 shared/HITS.pool.root.1
[2026-01-14 17:30:34]  *** Contents of shared directory: ***
[2026-01-14 17:30:34] total 729920
[2026-01-14 17:30:34] -rw-r--r-- 2 boincer umatlas 591884466 Jan 14 15:34 ATLAS.root_0
[2026-01-14 17:30:34] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 15:34 start_atlas.sh
[2026-01-14 17:30:34] -rw-r--r-- 2 boincer umatlas    592396 Jan 14 15:34 input.tar.gz
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas 153566706 Jan 14 17:28 HITS.pool.root.1
[2026-01-14 17:30:34] -rw------- 1 boincer umatlas   1361920 Jan 14 17:30 result.tar.gz
17:30:35 (30917): run_atlas exited; CPU time 51349.172568
17:30:35 (30917): called boinc_finish(0)

</stderr_txt>
]]>

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