Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:22:18 (573499): wrapper (7.7.26015): starting
08:22:18 (573499): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 08:22:18] Arguments: --nthreads 3
[2026-01-15 08:22:18] Threads: 3
[2026-01-15 08:22:18] Checking for CVMFS
[2026-01-15 08:22:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 08:22:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 08:22:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 08:22:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 08:22:18] 2.13.3.0 110733 1477 86416 155149 3 56 15020637 15728641 0 130560 0 1464645 99.991 61731 17 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-15 08:22:18] CVMFS is ok
[2026-01-15 08:22:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 08:22:18] Checking for apptainer binary...
[2026-01-15 08:22:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 08:22:18] Running /usr/bin/apptainer --version
[2026-01-15 08:22:18] apptainer version 1.4.5-2.el9
[2026-01-15 08:22:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 08:22:18] testio003
[2026-01-15 08:22:18] apptainer works
[2026-01-15 08:22:18] Set ATHENA_PROC_NUMBER=3
[2026-01-15 08:22:18] Set ATHENA_CORE_NUMBER=3
[2026-01-15 08:22:18] Starting ATLAS job with PandaID=6969548348
[2026-01-15 08:22:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 09:39:59]  *** The last 200 lines of the pilot log: ***
[2026-01-15 09:40:00] 2026-01-15 00:39:00,679 | INFO     | time since job start (4590s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:00,849 | INFO     | monitor loop #355: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:00,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:02,684 | INFO     | time since job start (4592s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:03,351 | INFO     | monitor loop #356: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:03,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:04,689 | INFO     | time since job start (4594s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:05,853 | INFO     | monitor loop #357: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:05,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:06,691 | INFO     | time since job start (4596s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:07,736 | INFO     | PID=577172 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 09:40:00] 2026-01-15 00:39:08,355 | INFO     | monitor loop #358: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:08,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:08,736 | INFO     | time since job start (4598s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:10,741 | INFO     | time since job start (4600s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:10,857 | INFO     | monitor loop #359: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:10,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:12,746 | INFO     | time since job start (4602s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:13,359 | INFO     | monitor loop #360: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:13,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:14,751 | INFO     | time since job start (4604s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:15,861 | INFO     | monitor loop #361: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:15,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:16,756 | INFO     | time since job start (4606s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:18,364 | INFO     | monitor loop #362: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:18,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:18,761 | INFO     | time since job start (4608s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:20,766 | INFO     | time since job start (4610s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:20,867 | INFO     | monitor loop #363: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:20,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:22,771 | INFO     | time since job start (4612s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:23,369 | INFO     | monitor loop #364: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:23,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:24,772 | INFO     | time since job start (4614s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:25,871 | INFO     | monitor loop #365: job 0:6969548348 is in state 'finished'
[2026-01-15 09:40:00] 2026-01-15 00:39:25,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:40:00] 2026-01-15 00:39:26,777 | INFO     | time since job start (4616s) is within the limit (349056.0s)
[2026-01-15 09:40:00] 2026-01-15 00:39:27,858 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 09:40:00] 2026-01-15 00:39:27,859 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3666.85025
[2026-01-15 09:40:00] 2026-01-15 00:39:27,860 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6969548348/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 09:40:00] 2026-01-15 00:39:27,860 | INFO     | extracted standard info from prmon json
[2026-01-15 09:40:00] 2026-01-15 00:39:27,860 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 09:40:00] 2026-01-15 00:39:27,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 09:40:00] 2026-01-15 00:39:27,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 09:40:00] 2026-01-15 00:39:27,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 09:40:00] 2026-01-15 00:39:27,861 | INFO     | fitting pss+swap vs Time
[2026-01-15 09:40:00] 2026-01-15 00:39:27,861 | INFO     | sum of square deviations: 93240818.0
[2026-01-15 09:40:00] 2026-01-15 00:39:27,861 | INFO     | sum of deviations: -10728007170.000002
[2026-01-15 09:40:00] 2026-01-15 00:39:27,861 | INFO     | mean x: 1768435292.0
[2026-01-15 09:40:00] 2026-01-15 00:39:27,861 | INFO     | mean y: 2664344.5223880596
[2026-01-15 09:40:00] 2026-01-15 00:39:27,861 | INFO     | intersect: 203473492885.05545
[2026-01-15 09:40:00] 2026-01-15 00:39:27,861 | INFO     | chi2: 0.15898296043453644
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | current memory leak: -115.06 B/s (using 67 data points, chi2=0.16)
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | could have reported an average CPU frequency of 3636 MHz (6 samples)
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | ..............................
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | . Timing measurements:
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | . get job = 0 s
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | . initial setup = 6 s
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | . payload setup = 5 s
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | . stage-in = 0 s
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | . payload execution = 4514 s
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | . stage-out = 0 s
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | . log creation = 0 s
[2026-01-15 09:40:00] 2026-01-15 00:39:27,862 | INFO     | ..............................
[2026-01-15 09:40:00] 2026-01-15 00:39:27,898 | INFO     | 
[2026-01-15 09:40:00] 2026-01-15 00:39:27,898 | INFO     | job summary report
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | --------------------------------------------------
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | PanDA job id: 6969548348
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | task id: 48215263
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | errors: (none)
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | pilot state: finished 
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | transexitcode: 0
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | exeerrorcode: 0
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | exeerrordiag: 
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | exitcode: 0
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | exitmsg: OK
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | cpuconsumptiontime: 12433 s
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | nevents: 400
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | neventsw: 0
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | pid: 583713
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | pgrp: 583713
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | corecount: 3
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | event service: False
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | sizes: {0: 2283951, 4: 2284213, 11: 2284241, 4522: 2310412, 4523: 2319410, 4525: 2319466, 4603: 2319788}
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | --------------------------------------------------
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | 
[2026-01-15 09:40:00] 2026-01-15 00:39:27,899 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-15 09:40:00] 2026-01-15 00:39:27,910 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,910 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,910 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,910 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | job 6969548348 has completed (purged errors)
[2026-01-15 09:40:00] 2026-01-15 00:39:27,911 | INFO     | overall cleanup function is called
[2026-01-15 09:40:00] 2026-01-15 00:39:28,917 | INFO     | --- collectZombieJob: --- 10, [583713]
[2026-01-15 09:40:00] 2026-01-15 00:39:28,917 | INFO     | zombie collector waiting for pid 583713
[2026-01-15 09:40:00] 2026-01-15 00:39:28,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 09:40:00] 2026-01-15 00:39:28,917 | INFO     | collected zombie processes
[2026-01-15 09:40:00] 2026-01-15 00:39:28,917 | INFO     | will attempt to kill all subprocesses of pid=583713
[2026-01-15 09:40:00] 2026-01-15 00:39:28,950 | INFO     | process IDs to be killed: [583713] (in reverse order)
[2026-01-15 09:40:00] 2026-01-15 00:39:28,969 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 09:40:00] 2026-01-15 00:39:28,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 09:40:00] 2026-01-15 00:39:28,970 | INFO     | did not find any defunct processes belonging to 583713
[2026-01-15 09:40:00] 2026-01-15 00:39:28,971 | INFO     | did not find any defunct processes belonging to 583713
[2026-01-15 09:40:00] 2026-01-15 00:39:28,971 | INFO     | ready for new job
[2026-01-15 09:40:00] 2026-01-15 00:39:28,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 09:40:00] 2026-01-15 00:39:28,972 | INFO     | ***************************************
[2026-01-15 09:40:00] 2026-01-15 00:39:28,972 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 09:40:00] 2026-01-15 00:39:28,972 | INFO     | ***************************************
[2026-01-15 09:40:00] 2026-01-15 00:39:28,972 | INFO     | 
[2026-01-15 09:40:00] 2026-01-15 00:39:28,973 | INFO     | architecture information:
[2026-01-15 09:40:00] 2026-01-15 00:39:28,973 | INFO     | executing command: cat /etc/os-release
[2026-01-15 09:40:00] 2026-01-15 00:39:28,982 | INFO     | cat /etc/os-release:
[2026-01-15 09:40:00] NAME="CentOS Linux"
[2026-01-15 09:40:00] VERSION="7 (Core)"
[2026-01-15 09:40:00] ID="centos"
[2026-01-15 09:40:00] ID_LIKE="rhel fedora"
[2026-01-15 09:40:00] VERSION_ID="7"
[2026-01-15 09:40:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 09:40:00] ANSI_COLOR="0;31"
[2026-01-15 09:40:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 09:40:00] HOME_URL="https://www.centos.org/"
[2026-01-15 09:40:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 09:40:00] 
[2026-01-15 09:40:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 09:40:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 09:40:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 09:40:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 09:40:00] 
[2026-01-15 09:40:00] 2026-01-15 00:39:28,982 | INFO     | ***************************************
[2026-01-15 09:40:00] 2026-01-15 00:39:29,485 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-15 09:40:00] 2026-01-15 00:39:29,494 | INFO     | sufficient remaining disk space (45635076096 B)
[2026-01-15 09:40:00] 2026-01-15 00:39:29,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 09:40:00] 2026-01-15 00:39:29,494 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 09:40:00] 2026-01-15 00:39:29,494 | INFO     | update_server=False
[2026-01-15 09:40:00] 2026-01-15 00:39:29,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 09:40:00] 2026-01-15 00:39:29,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 09:40:00] 2026-01-15 00:39:29,495 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 09:40:00] 2026-01-15 00:39:29,495 | INFO     | aborting loop
[2026-01-15 09:40:00] 2026-01-15 00:39:30,247 | INFO     | all data control threads have been joined
[2026-01-15 09:40:00] 2026-01-15 00:39:30,412 | INFO     | all job control threads have been joined
[2026-01-15 09:40:00] 2026-01-15 00:39:30,500 | INFO     | [job] retrieve thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:30,500 | INFO     | [job] queue monitor thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:30,500 | INFO     | [job] job monitor thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:30,506 | INFO     | [payload] failed_post thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:30,618 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:30,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 09:40:00] 2026-01-15 00:39:30,953 | INFO     | all payload control threads have been joined
[2026-01-15 09:40:00] 2026-01-15 00:39:31,207 | INFO     | [data] copytool_in thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:31,252 | INFO     | [data] control thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:31,383 | INFO     | [payload] validate_post thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:31,417 | INFO     | [job] control thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:31,496 | INFO     | [job] validate thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:31,698 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:31,725 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:31,958 | INFO     | [payload] control thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:32,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 09:40:00] 2026-01-15 00:39:32,912 | INFO     | [data] copytool_out thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:36,724 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:37,072 | INFO     | [monitor] cgroup control has ended
[2026-01-15 09:40:00] 2026-01-15 00:39:40,018 | INFO     | job.realtimelogging is not enabled
[2026-01-15 09:40:00] 2026-01-15 00:39:41,023 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 09:40:00] 2026-01-15 00:39:42,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120503424832)>', '<ExcThread(monitor, started 140120128734976)>']
[2026-01-15 09:40:00] 2026-01-15 00:39:47,979 | INFO     | all workflow threads have been joined
[2026-01-15 09:40:00] 2026-01-15 00:39:47,979 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 09:40:00] 2026-01-15 00:39:47,979 | INFO     | traces error code: 0
[2026-01-15 09:40:00] 2026-01-15 00:39:47,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 09:40:00] 2026-01-15 00:39:59,882 | INFO     | PID=577172 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 09:40:00] 2026-01-15 00:39:59,882 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 09:40:00] 2026-01-15 00:39:59,882 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 09:40:00] 2026-01-15 00:39:59,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 09:40:00] 2026-01-15 00:39:59,882 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 09:40:00] 2026-01-15 00:39:59,883 | CRITICAL | thread 'MainThread' is not alive
[2026-01-15 09:40:00] 2026-01-15 00:39:59,883 | INFO     | [monitor] control thread has ended
[2026-01-15 09:40:00] 2026-01-15 00:39:59,942 [wrapper] ==== pilot stdout END ====
[2026-01-15 09:40:00] 2026-01-15 00:39:59,943 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 09:40:00] 2026-01-15 00:39:59,945 [wrapper] pilotpid: 577172
[2026-01-15 09:40:00] 2026-01-15 00:39:59,948 [wrapper] Pilot exit status: 0
[2026-01-15 09:40:00] 2026-01-15 00:39:59,954 [wrapper] pandaids: 6969548348
[2026-01-15 09:40:00] 2026-01-15 00:39:59,966 [wrapper] cleanup supervisor_pilot  595344 577173
[2026-01-15 09:40:00] 2026-01-15 00:39:59,968 [wrapper] Test setup, not cleaning
[2026-01-15 09:40:00] 2026-01-15 00:39:59,969 [wrapper] apfmon messages muted
[2026-01-15 09:40:00] 2026-01-15 00:39:59,971 [wrapper] ==== wrapper stdout END ====
[2026-01-15 09:40:00] 2026-01-15 00:39:59,972 [wrapper] ==== wrapper stderr END ====
[2026-01-15 09:40:00]  *** Error codes and diagnostics ***
[2026-01-15 09:40:00]     "exeErrorCode": 0,
[2026-01-15 09:40:00]     "exeErrorDiag": "",
[2026-01-15 09:40:00]     "pilotErrorCode": 0,
[2026-01-15 09:40:00]     "pilotErrorDiag": "",
[2026-01-15 09:40:00]  *** Listing of results directory ***
[2026-01-15 09:40:00] total 740128
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc    579449 Jan 15 02:34 pilot3.tar.gz
[2026-01-15 09:40:00] -rwx------. 1 boinc boinc     36322 Jan 15 02:37 runpilot2-wrapper.sh
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc      5112 Jan 15 02:40 queuedata.json
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc       100 Jan 15 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 09:40:00] -rwxr-xr-x. 1 boinc boinc      7986 Jan 15 08:22 run_atlas
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc       105 Jan 15 08:22 job.xml
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc      9407 Jan 15 08:22 init_data.xml
[2026-01-15 09:40:00] -rw-r--r--. 2 boinc boinc 600569267 Jan 15 08:22 EVNT.32794306._001235.pool.root.1
[2026-01-15 09:40:00] -rw-r--r--. 2 boinc boinc     15847 Jan 15 08:22 start_atlas.sh
[2026-01-15 09:40:00] drwxrwx--x. 2 boinc boinc        68 Jan 15 08:22 shared
[2026-01-15 09:40:00] -rw-r--r--. 2 boinc boinc    592405 Jan 15 08:22 input.tar.gz
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc         0 Jan 15 08:22 boinc_lockfile
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc      2508 Jan 15 08:22 pandaJob.out
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc    999488 Jan 15 08:22 agis_schedconf.cvmfs.json
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc   1516246 Jan 15 08:22 agis_ddmendpoints.agis.ALL.json
[2026-01-15 09:40:00] drwx------. 5 boinc boinc      4096 Jan 15 08:22 pilot3
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc 151583221 Jan 15 09:37 HITS.48215263._030859.pool.root.1
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc       530 Jan 15 09:37 boinc_task_state.xml
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc      1022 Jan 15 09:38 memory_monitor_summary.json
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc    243057 Jan 15 09:38 log.48215263._030859.job.log.tgz.1
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc      7776 Jan 15 09:39 heartbeat.json
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc      8192 Jan 15 09:39 boinc_mmap_file
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc        27 Jan 15 09:39 wrapper_checkpoint.txt
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc       816 Jan 15 09:39 pilotlog.txt
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc        95 Jan 15 09:39 pilot_heartbeat.json
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc    669304 Jan 15 09:39 log.48215263._030859.job.log.1
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc       357 Jan 15 09:39 output.list
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc       620 Jan 15 09:39 runtime_log
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc    931840 Jan 15 09:39 result.tar.gz
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc       642 Jan 15 09:39 uwkKDmfzJ08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmC4lKDmYOWIJn.diag
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc      8775 Jan 15 09:39 runtime_log.err
[2026-01-15 09:40:00] -rw-r--r--. 1 boinc boinc     22009 Jan 15 09:40 stderr.txt
[2026-01-15 09:40:00] HITS file was successfully produced:
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc 151583221 Jan 15 09:37 shared/HITS.pool.root.1
[2026-01-15 09:40:00]  *** Contents of shared directory: ***
[2026-01-15 09:40:00] total 736036
[2026-01-15 09:40:00] -rw-r--r--. 2 boinc boinc 600569267 Jan 15 08:22 ATLAS.root_0
[2026-01-15 09:40:00] -rw-r--r--. 2 boinc boinc     15847 Jan 15 08:22 start_atlas.sh
[2026-01-15 09:40:00] -rw-r--r--. 2 boinc boinc    592405 Jan 15 08:22 input.tar.gz
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc 151583221 Jan 15 09:37 HITS.pool.root.1
[2026-01-15 09:40:00] -rw-------. 1 boinc boinc    931840 Jan 15 09:39 result.tar.gz
09:40:01 (573499): run_atlas exited; CPU time 12434.038207
09:40:01 (573499): called boinc_finish(0)

</stderr_txt>
]]>

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