Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:40:04 (597869): wrapper (7.7.26015): starting
09:40:04 (597869): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 09:40:04] Arguments: --nthreads 3
[2026-01-15 09:40:04] Threads: 3
[2026-01-15 09:40:04] Checking for CVMFS
[2026-01-15 09:40:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:40:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:40:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:40:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:40:05] 2.13.3.0 110733 1555 86648 155150 0 56 15033078 15728640 0 130560 0 1541737 99.991 63158 17 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-15 09:40:05] CVMFS is ok
[2026-01-15 09:40:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:40:05] Checking for apptainer binary...
[2026-01-15 09:40:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:40:05] Running /usr/bin/apptainer --version
[2026-01-15 09:40:05] apptainer version 1.4.5-2.el9
[2026-01-15 09:40:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:40:05] testio003
[2026-01-15 09:40:05] apptainer works
[2026-01-15 09:40:05] Set ATHENA_PROC_NUMBER=3
[2026-01-15 09:40:05] Set ATHENA_CORE_NUMBER=3
[2026-01-15 09:40:05] Starting ATLAS job with PandaID=6969548339
[2026-01-15 09:40:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:55:28]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:55:28] 2026-01-15 01:53:57,031 | INFO     | monitor loop #345: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:53:57,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:53:57,153 | INFO     | PID=601539 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 10:55:28] 2026-01-15 01:53:58,154 | INFO     | time since job start (4423s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:53:59,534 | INFO     | monitor loop #346: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:53:59,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:54:00,159 | INFO     | time since job start (4425s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:02,038 | INFO     | monitor loop #347: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:54:02,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:54:02,164 | INFO     | time since job start (4427s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:04,170 | INFO     | time since job start (4429s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:04,541 | INFO     | monitor loop #348: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:54:04,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:54:06,175 | INFO     | time since job start (4431s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:07,043 | INFO     | monitor loop #349: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:54:07,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:54:08,180 | INFO     | time since job start (4433s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:09,546 | INFO     | monitor loop #350: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:54:09,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:54:10,185 | INFO     | time since job start (4435s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:12,049 | INFO     | monitor loop #351: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:54:12,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:54:12,190 | INFO     | time since job start (4437s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:14,195 | INFO     | time since job start (4439s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:14,553 | INFO     | monitor loop #352: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:54:14,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:54:16,201 | INFO     | time since job start (4441s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:17,056 | INFO     | monitor loop #353: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:54:17,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:54:18,206 | INFO     | time since job start (4443s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:19,290 | INFO     | PID=601539 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 10:55:28] 2026-01-15 01:54:19,559 | INFO     | monitor loop #354: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:54:19,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:54:20,290 | INFO     | time since job start (4445s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:22,062 | INFO     | monitor loop #355: job 0:6969548339 is in state 'finished'
[2026-01-15 10:55:28] 2026-01-15 01:54:22,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:55:28] 2026-01-15 01:54:22,295 | INFO     | time since job start (4447s) is within the limit (349056.0s)
[2026-01-15 10:55:28] 2026-01-15 01:54:23,553 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 10:55:28] 2026-01-15 01:54:23,553 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3600.05225
[2026-01-15 10:55:28] 2026-01-15 01:54:23,554 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6969548339/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:55:28] 2026-01-15 01:54:23,554 | INFO     | extracted standard info from prmon json
[2026-01-15 10:55:28] 2026-01-15 01:54:23,554 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:55:28] 2026-01-15 01:54:23,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:55:28] 2026-01-15 01:54:23,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:55:28] 2026-01-15 01:54:23,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:55:28] 2026-01-15 01:54:23,555 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | sum of square deviations: 85136480.0
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | sum of deviations: -12114092236.0
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | mean x: 1768439895.0
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | mean y: 2543602.8
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | intersect: 251634323561.8981
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | chi2: 0.12534227334259626
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | current memory leak: -142.29 B/s (using 65 data points, chi2=0.13)
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | could have reported an average CPU frequency of 3629 MHz (6 samples)
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | ..............................
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | . Timing measurements:
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | . get job = 0 s
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | . initial setup = 6 s
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | . payload setup = 4 s
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | . stage-in = 0 s
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | . payload execution = 4348 s
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | . stage-out = 0 s
[2026-01-15 10:55:28] 2026-01-15 01:54:23,556 | INFO     | . log creation = 0 s
[2026-01-15 10:55:28] 2026-01-15 01:54:23,557 | INFO     | ..............................
[2026-01-15 10:55:28] 2026-01-15 01:54:23,592 | INFO     | 
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | job summary report
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | --------------------------------------------------
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | PanDA job id: 6969548339
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | task id: 48215263
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | errors: (none)
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | pilot state: finished 
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | transexitcode: 0
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | exeerrorcode: 0
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | exeerrordiag: 
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | exitcode: 0
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | exitmsg: OK
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | cpuconsumptiontime: 12068 s
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | nevents: 400
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | neventsw: 0
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | pid: 608071
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | pgrp: 608071
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | corecount: 3
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | event service: False
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | sizes: {0: 2283949, 4: 2284211, 10: 2284239, 4356: 2310377, 4357: 2319375, 4359: 2319431, 4434: 2319753}
[2026-01-15 10:55:28] 2026-01-15 01:54:23,593 | INFO     | --------------------------------------------------
[2026-01-15 10:55:28] 2026-01-15 01:54:23,594 | INFO     | 
[2026-01-15 10:55:28] 2026-01-15 01:54:23,594 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-15 10:55:28] 2026-01-15 01:54:23,603 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,604 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:55:28] 2026-01-15 01:54:23,605 | INFO     | job 6969548339 has completed (purged errors)
[2026-01-15 10:55:28] 2026-01-15 01:54:23,605 | INFO     | overall cleanup function is called
[2026-01-15 10:55:28] 2026-01-15 01:54:24,606 | INFO     | --- collectZombieJob: --- 10, [608071]
[2026-01-15 10:55:28] 2026-01-15 01:54:24,606 | INFO     | zombie collector waiting for pid 608071
[2026-01-15 10:55:28] 2026-01-15 01:54:24,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:55:28] 2026-01-15 01:54:24,607 | INFO     | collected zombie processes
[2026-01-15 10:55:28] 2026-01-15 01:54:24,607 | INFO     | will attempt to kill all subprocesses of pid=608071
[2026-01-15 10:55:28] 2026-01-15 01:54:24,642 | INFO     | process IDs to be killed: [608071] (in reverse order)
[2026-01-15 10:55:28] 2026-01-15 01:54:24,663 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:55:28] 2026-01-15 01:54:24,664 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:55:28] 2026-01-15 01:54:24,668 | INFO     | did not find any defunct processes belonging to 608071
[2026-01-15 10:55:28] 2026-01-15 01:54:24,672 | INFO     | did not find any defunct processes belonging to 608071
[2026-01-15 10:55:28] 2026-01-15 01:54:24,673 | INFO     | ready for new job
[2026-01-15 10:55:28] 2026-01-15 01:54:24,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:55:28] 2026-01-15 01:54:24,676 | INFO     | ***************************************
[2026-01-15 10:55:28] 2026-01-15 01:54:24,677 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:55:28] 2026-01-15 01:54:24,677 | INFO     | ***************************************
[2026-01-15 10:55:28] 2026-01-15 01:54:24,677 | INFO     | 
[2026-01-15 10:55:28] 2026-01-15 01:54:24,678 | INFO     | architecture information:
[2026-01-15 10:55:28] 2026-01-15 01:54:24,678 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:55:28] 2026-01-15 01:54:24,692 | INFO     | cat /etc/os-release:
[2026-01-15 10:55:28] NAME="CentOS Linux"
[2026-01-15 10:55:28] VERSION="7 (Core)"
[2026-01-15 10:55:28] ID="centos"
[2026-01-15 10:55:28] ID_LIKE="rhel fedora"
[2026-01-15 10:55:28] VERSION_ID="7"
[2026-01-15 10:55:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:55:28] ANSI_COLOR="0;31"
[2026-01-15 10:55:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:55:28] HOME_URL="https://www.centos.org/"
[2026-01-15 10:55:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:55:28] 
[2026-01-15 10:55:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:55:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:55:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:55:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:55:28] 
[2026-01-15 10:55:28] 2026-01-15 01:54:24,692 | INFO     | ***************************************
[2026-01-15 10:55:28] 2026-01-15 01:54:25,196 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-15 10:55:28] 2026-01-15 01:54:25,207 | INFO     | sufficient remaining disk space (46215987200 B)
[2026-01-15 10:55:28] 2026-01-15 01:54:25,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:55:28] 2026-01-15 01:54:25,207 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:55:28] 2026-01-15 01:54:25,207 | INFO     | update_server=False
[2026-01-15 10:55:28] 2026-01-15 01:54:25,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:55:28] 2026-01-15 01:54:25,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:55:28] 2026-01-15 01:54:25,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:55:28] 2026-01-15 01:54:25,412 | INFO     | all data control threads have been joined
[2026-01-15 10:55:28] 2026-01-15 01:54:25,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:55:28] 2026-01-15 01:54:25,570 | INFO     | aborting loop
[2026-01-15 10:55:28] 2026-01-15 01:54:25,758 | INFO     | all payload control threads have been joined
[2026-01-15 10:55:28] 2026-01-15 01:54:26,211 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:26,213 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:26,292 | INFO     | all job control threads have been joined
[2026-01-15 10:55:28] 2026-01-15 01:54:26,418 | INFO     | [data] control thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:26,575 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:26,584 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:26,763 | INFO     | [payload] control thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:26,980 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:27,135 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:27,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:55:28] 2026-01-15 01:54:27,213 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:27,278 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:27,298 | INFO     | [job] control thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:27,410 | INFO     | [job] validate thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:27,451 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:27,542 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:31,206 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:35,969 | INFO     | job.realtimelogging is not enabled
[2026-01-15 10:55:28] 2026-01-15 01:54:36,974 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:55:28] 2026-01-15 01:54:55,415 | INFO     | PID=601539 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 10:55:28] 2026-01-15 01:54:55,415 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:55:28] 2026-01-15 01:54:55,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:55:28] 2026-01-15 01:54:55,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:55:28] 2026-01-15 01:55:08,738 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-15 10:55:28] 2026-01-15 01:55:22,086 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:55:28] 2026-01-15 01:55:23,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009812797248)>', '<ExcThread(monitor, started 140009449432832)>']
[2026-01-15 10:55:28] 2026-01-15 01:55:24,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:55:28] 2026-01-15 01:55:24,548 | INFO     | [monitor] control thread has ended
[2026-01-15 10:55:28] 2026-01-15 01:55:28,872 | INFO     | all workflow threads have been joined
[2026-01-15 10:55:28] 2026-01-15 01:55:28,872 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:55:28] 2026-01-15 01:55:28,873 | INFO     | traces error code: 0
[2026-01-15 10:55:28] 2026-01-15 01:55:28,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:55:28] 2026-01-15 01:55:28,932 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:55:28] 2026-01-15 01:55:28,934 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:55:28] 2026-01-15 01:55:28,935 [wrapper] pilotpid: 601539
[2026-01-15 10:55:28] 2026-01-15 01:55:28,937 [wrapper] Pilot exit status: 0
[2026-01-15 10:55:28] 2026-01-15 01:55:28,943 [wrapper] pandaids: 6969548339
[2026-01-15 10:55:28] 2026-01-15 01:55:28,955 [wrapper] cleanup supervisor_pilot  622111 601540
[2026-01-15 10:55:28] 2026-01-15 01:55:28,957 [wrapper] Test setup, not cleaning
[2026-01-15 10:55:28] 2026-01-15 01:55:28,958 [wrapper] apfmon messages muted
[2026-01-15 10:55:28] 2026-01-15 01:55:28,960 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:55:28] 2026-01-15 01:55:28,961 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:55:28]  *** Error codes and diagnostics ***
[2026-01-15 10:55:28]     "exeErrorCode": 0,
[2026-01-15 10:55:28]     "exeErrorDiag": "",
[2026-01-15 10:55:28]     "pilotErrorCode": 0,
[2026-01-15 10:55:28]     "pilotErrorDiag": "",
[2026-01-15 10:55:28]  *** Listing of results directory ***
[2026-01-15 10:55:28] total 737396
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc    579449 Jan 15 02:34 pilot3.tar.gz
[2026-01-15 10:55:28] -rwx------. 1 boinc boinc     36322 Jan 15 02:37 runpilot2-wrapper.sh
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc      5112 Jan 15 02:40 queuedata.json
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc       100 Jan 15 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:55:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan 15 09:40 run_atlas
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc       105 Jan 15 09:40 job.xml
[2026-01-15 10:55:28] -rw-r--r--. 2 boinc boinc 600569267 Jan 15 09:40 EVNT.32794306._001235.pool.root.1
[2026-01-15 10:55:28] -rw-r--r--. 2 boinc boinc     15847 Jan 15 09:40 start_atlas.sh
[2026-01-15 10:55:28] drwxrwx--x. 2 boinc boinc        68 Jan 15 09:40 shared
[2026-01-15 10:55:28] -rw-r--r--. 2 boinc boinc    592404 Jan 15 09:40 input.tar.gz
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc         0 Jan 15 09:40 boinc_lockfile
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc      2507 Jan 15 09:40 pandaJob.out
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc    999472 Jan 15 09:40 agis_schedconf.cvmfs.json
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc   1516246 Jan 15 09:40 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:55:28] drwx------. 5 boinc boinc      4096 Jan 15 09:40 pilot3
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc      9413 Jan 15 10:07 init_data.xml
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc 148848411 Jan 15 10:52 HITS.48215263._030850.pool.root.1
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc       530 Jan 15 10:53 boinc_task_state.xml
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc      1013 Jan 15 10:53 memory_monitor_summary.json
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc    229542 Jan 15 10:53 log.48215263._030850.job.log.tgz.1
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc      7763 Jan 15 10:54 heartbeat.json
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc        95 Jan 15 10:54 pilot_heartbeat.json
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc      8192 Jan 15 10:55 boinc_mmap_file
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc        27 Jan 15 10:55 wrapper_checkpoint.txt
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc      4819 Jan 15 10:55 pilotlog.txt
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc    647177 Jan 15 10:55 log.48215263._030850.job.log.1
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc       357 Jan 15 10:55 output.list
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc       620 Jan 15 10:55 runtime_log
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc    901120 Jan 15 10:55 result.tar.gz
[2026-01-15 10:55:28] -rw-------. 1 boinc boinc       642 Jan 15 10:55 xpdKDmfzJ08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm73lKDmwHEBNn.diag
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc      8775 Jan 15 10:55 runtime_log.err
[2026-01-15 10:55:28] -rw-r--r--. 1 boinc boinc     22105 Jan 15 10:55 stderr.txt
[2026-01-15 10:55:29] HITS file was successfully produced:
[2026-01-15 10:55:29] -rw-------. 1 boinc boinc 148848411 Jan 15 10:52 shared/HITS.pool.root.1
[2026-01-15 10:55:29]  *** Contents of shared directory: ***
[2026-01-15 10:55:29] total 733332
[2026-01-15 10:55:29] -rw-r--r--. 2 boinc boinc 600569267 Jan 15 09:40 ATLAS.root_0
[2026-01-15 10:55:29] -rw-r--r--. 2 boinc boinc     15847 Jan 15 09:40 start_atlas.sh
[2026-01-15 10:55:29] -rw-r--r--. 2 boinc boinc    592404 Jan 15 09:40 input.tar.gz
[2026-01-15 10:55:29] -rw-------. 1 boinc boinc 148848411 Jan 15 10:52 HITS.pool.root.1
[2026-01-15 10:55:29] -rw-------. 1 boinc boinc    901120 Jan 15 10:55 result.tar.gz
10:55:30 (597869): run_atlas exited; CPU time 12078.555201
10:55:30 (597869): called boinc_finish(0)

</stderr_txt>
]]>

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