Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:56:45 (276937): wrapper (7.7.26015): starting
11:56:45 (276937): wrapper: running run_atlas (--nthreads 5)
[2026-01-14 11:56:45] Arguments: --nthreads 5
[2026-01-14 11:56:45] Threads: 5
[2026-01-14 11:56:45] Checking for CVMFS
[2026-01-14 11:56:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 11:56:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 11:56:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 11:56:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 11:56:49] 2.13.3.0 277146 0 29760 155142 4 1 4395656 10240000 0 130560 0 0 100.000 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2026-01-14 11:56:49] CVMFS is ok
[2026-01-14 11:56:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 11:56:49] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-14 11:56:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-14 11:56:49] Further information can be found at the LHC@home message board.
[2026-01-14 11:56:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 11:56:49] Checking for apptainer binary...
[2026-01-14 11:56:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 11:56:49] Running /usr/bin/apptainer --version
[2026-01-14 11:56:49] apptainer version 1.4.5
[2026-01-14 11:56:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 11:56:49] boinc-cte
[2026-01-14 11:56:49] apptainer works
[2026-01-14 11:56:49] Set ATHENA_PROC_NUMBER=5
[2026-01-14 11:56:49] Set ATHENA_CORE_NUMBER=5
[2026-01-14 11:56:49] Starting ATLAS job with PandaID=6969547645
[2026-01-14 11:56:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 12:45:15]  *** The last 200 lines of the pilot log: ***
[2026-01-14 12:45:15] 2026-01-14 20:44:20,256 | INFO     | stage-out finished correctly
[2026-01-14 12:45:15] 2026-01-14 20:44:20,316 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 12:45:15] 2026-01-14 20:44:20,369 | INFO     | job 6969547645 has state=finished
[2026-01-14 12:45:15] 2026-01-14 20:44:20,369 | INFO     | preparing for final server update for job 6969547645 in state='finished'
[2026-01-14 12:45:15] 2026-01-14 20:44:20,370 | INFO     | this job has now completed (state=finished)
[2026-01-14 12:45:15] 2026-01-14 20:44:20,370 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 12:45:15] 2026-01-14 20:44:20,370 | INFO     | log transfer has been attempted: DONE
[2026-01-14 12:45:15] 2026-01-14 20:44:20,370 | INFO     | job 6969547645 has finished - writing final server update
[2026-01-14 12:45:15] 2026-01-14 20:44:20,370 | INFO     | total number of processed events: 400 (read)
[2026-01-14 12:45:15] 2026-01-14 20:44:20,371 | INFO     | executing command: lscpu
[2026-01-14 12:45:15] 2026-01-14 20:44:20,394 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 12:45:15] 2026-01-14 20:44:20,693 | INFO     | time since job start (2835s) is within the limit (349056.0s)
[2026-01-14 12:45:15] 2026-01-14 20:44:20,861 | INFO     | monitor loop #222: job 0:6969547645 is in state 'finished'
[2026-01-14 12:45:15] 2026-01-14 20:44:20,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 12:45:15] 2026-01-14 20:44:22,696 | INFO     | time since job start (2837s) is within the limit (349056.0s)
[2026-01-14 12:45:15] 2026-01-14 20:44:23,363 | INFO     | monitor loop #223: job 0:6969547645 is in state 'finished'
[2026-01-14 12:45:15] 2026-01-14 20:44:23,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 12:45:15] 2026-01-14 20:44:24,700 | INFO     | time since job start (2839s) is within the limit (349056.0s)
[2026-01-14 12:45:15] 2026-01-14 20:44:25,867 | INFO     | monitor loop #224: job 0:6969547645 is in state 'finished'
[2026-01-14 12:45:15] 2026-01-14 20:44:25,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 12:45:15] 2026-01-14 20:44:26,705 | INFO     | time since job start (2841s) is within the limit (349056.0s)
[2026-01-14 12:45:15] 2026-01-14 20:44:28,370 | INFO     | monitor loop #225: job 0:6969547645 is in state 'finished'
[2026-01-14 12:45:15] 2026-01-14 20:44:28,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 12:45:15] 2026-01-14 20:44:28,707 | INFO     | time since job start (2843s) is within the limit (349056.0s)
[2026-01-14 12:45:15] 2026-01-14 20:44:30,713 | INFO     | time since job start (2845s) is within the limit (349056.0s)
[2026-01-14 12:45:15] 2026-01-14 20:44:30,873 | INFO     | monitor loop #226: job 0:6969547645 is in state 'finished'
[2026-01-14 12:45:15] 2026-01-14 20:44:30,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 12:45:15] 2026-01-14 20:44:32,719 | INFO     | time since job start (2847s) is within the limit (349056.0s)
[2026-01-14 12:45:15] 2026-01-14 20:44:33,377 | INFO     | monitor loop #227: job 0:6969547645 is in state 'finished'
[2026-01-14 12:45:15] 2026-01-14 20:44:33,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 12:45:15] 2026-01-14 20:44:34,724 | INFO     | time since job start (2849s) is within the limit (349056.0s)
[2026-01-14 12:45:15] 2026-01-14 20:44:35,879 | INFO     | monitor loop #228: job 0:6969547645 is in state 'finished'
[2026-01-14 12:45:15] 2026-01-14 20:44:35,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 12:45:15] 2026-01-14 20:44:36,728 | INFO     | time since job start (2851s) is within the limit (349056.0s)
[2026-01-14 12:45:15] 2026-01-14 20:44:37,768 | INFO     | PID=281237 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 12:45:15] 2026-01-14 20:44:38,381 | INFO     | monitor loop #229: job 0:6969547645 is in state 'finished'
[2026-01-14 12:45:15] 2026-01-14 20:44:38,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 12:45:15] 2026-01-14 20:44:38,768 | INFO     | time since job start (2853s) is within the limit (349056.0s)
[2026-01-14 12:45:15] 2026-01-14 20:44:40,499 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 12:45:15] 2026-01-14 20:44:40,500 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3800.091
[2026-01-14 12:45:15] 2026-01-14 20:44:40,502 | INFO     | using path: /var/lib/boinc-client/slots/10/PanDA_Pilot-6969547645/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 12:45:15] 2026-01-14 20:44:40,502 | INFO     | extracted standard info from prmon json
[2026-01-14 12:45:15] 2026-01-14 20:44:40,502 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 12:45:15] 2026-01-14 20:44:40,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 12:45:15] 2026-01-14 20:44:40,502 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 12:45:15] 2026-01-14 20:44:40,502 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 12:45:15] 2026-01-14 20:44:40,503 | INFO     | fitting pss+swap vs Time
[2026-01-14 12:45:15] 2026-01-14 20:44:40,503 | INFO     | sum of square deviations: 18381740.0
[2026-01-14 12:45:15] 2026-01-14 20:44:40,504 | INFO     | sum of deviations: -4108439060.0
[2026-01-14 12:45:15] 2026-01-14 20:44:40,504 | INFO     | mean x: 1768422120.0
[2026-01-14 12:45:15] 2026-01-14 20:44:40,504 | INFO     | mean y: 2615181.6153846155
[2026-01-14 12:45:15] 2026-01-14 20:44:40,504 | INFO     | intersect: 395256520001.07245
[2026-01-14 12:45:15] 2026-01-14 20:44:40,504 | INFO     | chi2: 0.06919517943758349
[2026-01-14 12:45:15] 2026-01-14 20:44:40,504 | INFO     | current memory leak: -223.51 B/s (using 39 data points, chi2=0.07)
[2026-01-14 12:45:15] 2026-01-14 20:44:40,504 | INFO     | could have reported an average CPU frequency of 3800 MHz (5 samples)
[2026-01-14 12:45:15] 2026-01-14 20:44:40,504 | INFO     | ..............................
[2026-01-14 12:45:15] 2026-01-14 20:44:40,504 | INFO     | . Timing measurements:
[2026-01-14 12:45:15] 2026-01-14 20:44:40,505 | INFO     | . get job = 0 s
[2026-01-14 12:45:15] 2026-01-14 20:44:40,505 | INFO     | . initial setup = 3 s
[2026-01-14 12:45:15] 2026-01-14 20:44:40,505 | INFO     | . payload setup = 11 s
[2026-01-14 12:45:15] 2026-01-14 20:44:40,505 | INFO     | . stage-in = 0 s
[2026-01-14 12:45:15] 2026-01-14 20:44:40,505 | INFO     | . payload execution = 2804 s
[2026-01-14 12:45:15] 2026-01-14 20:44:40,505 | INFO     | . stage-out = 0 s
[2026-01-14 12:45:15] 2026-01-14 20:44:40,505 | INFO     | . log creation = 0 s
[2026-01-14 12:45:15] 2026-01-14 20:44:40,505 | INFO     | ..............................
[2026-01-14 12:45:15] 2026-01-14 20:44:40,556 | INFO     | 
[2026-01-14 12:45:15] 2026-01-14 20:44:40,556 | INFO     | job summary report
[2026-01-14 12:45:15] 2026-01-14 20:44:40,556 | INFO     | --------------------------------------------------
[2026-01-14 12:45:15] 2026-01-14 20:44:40,556 | INFO     | PanDA job id: 6969547645
[2026-01-14 12:45:15] 2026-01-14 20:44:40,556 | INFO     | task id: 48215263
[2026-01-14 12:45:15] 2026-01-14 20:44:40,556 | INFO     | errors: (none)
[2026-01-14 12:45:15] 2026-01-14 20:44:40,556 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 12:45:15] 2026-01-14 20:44:40,556 | INFO     | pilot state: finished 
[2026-01-14 12:45:15] 2026-01-14 20:44:40,556 | INFO     | transexitcode: 0
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | exeerrorcode: 0
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | exeerrordiag: 
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | exitcode: 0
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | exitmsg: OK
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | cpuconsumptiontime: 13151 s
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | nevents: 400
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | neventsw: 0
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | pid: 287675
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | pgrp: 287675
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | corecount: 5
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | event service: False
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | sizes: {0: 2283816, 1: 2284015, 5: 2284277, 11: 2284305, 2819: 2309619, 2820: 2318817, 2840: 2318987}
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | --------------------------------------------------
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | 
[2026-01-14 12:45:15] 2026-01-14 20:44:40,557 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/10
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,586 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 12:45:15] 2026-01-14 20:44:40,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,586 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 12:45:15] 2026-01-14 20:44:40,586 | INFO     | job 6969547645 has completed (purged errors)
[2026-01-14 12:45:15] 2026-01-14 20:44:40,586 | INFO     | overall cleanup function is called
[2026-01-14 12:45:15] 2026-01-14 20:44:41,591 | INFO     | --- collectZombieJob: --- 10, [287675]
[2026-01-14 12:45:15] 2026-01-14 20:44:41,591 | INFO     | zombie collector waiting for pid 287675
[2026-01-14 12:45:15] 2026-01-14 20:44:41,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 12:45:15] 2026-01-14 20:44:41,592 | INFO     | collected zombie processes
[2026-01-14 12:45:15] 2026-01-14 20:44:41,592 | INFO     | will attempt to kill all subprocesses of pid=287675
[2026-01-14 12:45:15] 2026-01-14 20:44:41,630 | INFO     | process IDs to be killed: [287675] (in reverse order)
[2026-01-14 12:45:15] 2026-01-14 20:44:41,671 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 12:45:15] 2026-01-14 20:44:41,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 12:45:15] 2026-01-14 20:44:41,673 | INFO     | did not find any defunct processes belonging to 287675
[2026-01-14 12:45:15] 2026-01-14 20:44:41,673 | INFO     | did not find any defunct processes belonging to 287675
[2026-01-14 12:45:15] 2026-01-14 20:44:41,674 | INFO     | ready for new job
[2026-01-14 12:45:15] 2026-01-14 20:44:41,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 12:45:15] 2026-01-14 20:44:41,674 | INFO     | ***************************************
[2026-01-14 12:45:15] 2026-01-14 20:44:41,674 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 12:45:15] 2026-01-14 20:44:41,675 | INFO     | ***************************************
[2026-01-14 12:45:15] 2026-01-14 20:44:41,675 | INFO     | 
[2026-01-14 12:45:15] 2026-01-14 20:44:41,675 | INFO     | architecture information:
[2026-01-14 12:45:15] 2026-01-14 20:44:41,675 | INFO     | executing command: cat /etc/os-release
[2026-01-14 12:45:15] 2026-01-14 20:44:41,689 | INFO     | cat /etc/os-release:
[2026-01-14 12:45:15] NAME="CentOS Linux"
[2026-01-14 12:45:15] VERSION="7 (Core)"
[2026-01-14 12:45:15] ID="centos"
[2026-01-14 12:45:15] ID_LIKE="rhel fedora"
[2026-01-14 12:45:15] VERSION_ID="7"
[2026-01-14 12:45:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 12:45:15] ANSI_COLOR="0;31"
[2026-01-14 12:45:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 12:45:15] HOME_URL="https://www.centos.org/"
[2026-01-14 12:45:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 12:45:15] 
[2026-01-14 12:45:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 12:45:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 12:45:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 12:45:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 12:45:15] 
[2026-01-14 12:45:15] 2026-01-14 20:44:41,689 | INFO     | ***************************************
[2026-01-14 12:45:15] 2026-01-14 20:44:42,192 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/10
[2026-01-14 12:45:15] 2026-01-14 20:44:42,217 | INFO     | sufficient remaining disk space (41594912768 B)
[2026-01-14 12:45:15] 2026-01-14 20:44:42,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 12:45:15] 2026-01-14 20:44:42,217 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 12:45:15] 2026-01-14 20:44:42,217 | INFO     | update_server=False
[2026-01-14 12:45:15] 2026-01-14 20:44:42,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 12:45:15] 2026-01-14 20:44:42,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 12:45:15] 2026-01-14 20:44:42,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 12:45:15] 2026-01-14 20:44:42,218 | INFO     | aborting loop
[2026-01-14 12:45:15] 2026-01-14 20:44:42,776 | INFO     | all job control threads have been joined
[2026-01-14 12:45:15] 2026-01-14 20:44:42,862 | INFO     | all payload control threads have been joined
[2026-01-14 12:45:15] 2026-01-14 20:44:43,162 | INFO     | all data control threads have been joined
[2026-01-14 12:45:15] 2026-01-14 20:44:43,219 | INFO     | [job] retrieve thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:43,223 | INFO     | [job] queue monitor thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:43,223 | INFO     | [job] job monitor thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:43,231 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:43,263 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:43,309 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:43,311 | INFO     | [data] copytool_in thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:43,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 12:45:15] 2026-01-14 20:44:43,779 | INFO     | [job] control thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:43,867 | INFO     | [payload] control thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:44,035 | INFO     | [payload] failed_post thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:44,167 | INFO     | [data] control thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:44,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 12:45:15] 2026-01-14 20:44:44,689 | INFO     | [job] validate thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:44,816 | INFO     | [payload] validate_post thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:45,343 | INFO     | [data] copytool_out thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:48,393 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:44:53,190 | INFO     | job.realtimelogging is not enabled
[2026-01-14 12:45:15] 2026-01-14 20:44:54,192 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 12:45:15] 2026-01-14 20:45:09,406 | INFO     | [monitor] cgroup control has ended
[2026-01-14 12:45:15] 2026-01-14 20:45:10,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140156779345728)>', '<ExcThread(monitor, started 140155780327168)>']
[2026-01-14 12:45:15] 2026-01-14 20:45:11,898 | INFO     | PID=281237 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 12:45:15] 2026-01-14 20:45:11,899 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 12:45:15] 2026-01-14 20:45:11,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 12:45:15] 2026-01-14 20:45:11,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 12:45:15] 2026-01-14 20:45:11,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 12:45:15] 2026-01-14 20:45:11,899 | INFO     | [monitor] control thread has ended
[2026-01-14 12:45:15] 2026-01-14 20:45:15,435 | INFO     | all workflow threads have been joined
[2026-01-14 12:45:15] 2026-01-14 20:45:15,435 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 12:45:15] 2026-01-14 20:45:15,436 | INFO     | traces error code: 0
[2026-01-14 12:45:15] 2026-01-14 20:45:15,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 12:45:15] 2026-01-14 20:45:15,556 [wrapper] ==== pilot stdout END ====
[2026-01-14 12:45:15] 2026-01-14 20:45:15,559 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 12:45:15] 2026-01-14 20:45:15,561 [wrapper] pilotpid: 281237
[2026-01-14 12:45:15] 2026-01-14 20:45:15,564 [wrapper] Pilot exit status: 0
[2026-01-14 12:45:15] 2026-01-14 20:45:15,573 [wrapper] pandaids: 6969547645
[2026-01-14 12:45:15] 2026-01-14 20:45:15,593 [wrapper] cleanup supervisor_pilot  296616 281238
[2026-01-14 12:45:15] 2026-01-14 20:45:15,595 [wrapper] Test setup, not cleaning
[2026-01-14 12:45:15] 2026-01-14 20:45:15,597 [wrapper] apfmon messages muted
[2026-01-14 12:45:15] 2026-01-14 20:45:15,600 [wrapper] ==== wrapper stdout END ====
[2026-01-14 12:45:15] 2026-01-14 20:45:15,607 [wrapper] ==== wrapper stderr END ====
[2026-01-14 12:45:15]  *** Error codes and diagnostics ***
[2026-01-14 12:45:15]     "exeErrorCode": 0,
[2026-01-14 12:45:15]     "exeErrorDiag": "",
[2026-01-14 12:45:15]     "pilotErrorCode": 0,
[2026-01-14 12:45:15]     "pilotErrorDiag": "",
[2026-01-14 12:45:15]  *** Listing of results directory ***
[2026-01-14 12:45:15] total 739440
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc    579449 Jan 14 09:34 pilot3.tar.gz
[2026-01-14 12:45:15] -rwx------ 1 boinc boinc     36322 Jan 14 09:34 runpilot2-wrapper.sh
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc      5112 Jan 14 09:36 queuedata.json
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc       100 Jan 14 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 12:45:15] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 11:56 run_atlas
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc       105 Jan 14 11:56 job.xml
[2026-01-14 12:45:15] -rw-r--r-- 2 boinc boinc     15847 Jan 14 11:56 start_atlas.sh
[2026-01-14 12:45:15] drwxrwx--x 2 boinc boinc      4096 Jan 14 11:56 shared
[2026-01-14 12:45:15] -rw-r--r-- 2 boinc boinc    592410 Jan 14 11:56 input.tar.gz
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc      6590 Jan 14 11:56 init_data.xml
[2026-01-14 12:45:15] -rw-r--r-- 2 boinc boinc 599562565 Jan 14 11:56 EVNT.32794306._001217.pool.root.1
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc         0 Jan 14 11:56 boinc_lockfile
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc      2508 Jan 14 11:56 pandaJob.out
[2026-01-14 12:45:15] -rw------- 1 boinc boinc    998072 Jan 14 11:57 agis_schedconf.cvmfs.json
[2026-01-14 12:45:15] -rw------- 1 boinc boinc   1516246 Jan 14 11:57 agis_ddmendpoints.agis.ALL.json
[2026-01-14 12:45:15] drwx------ 5 boinc boinc      4096 Jan 14 11:57 pilot3
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc       530 Jan 14 12:43 boinc_task_state.xml
[2026-01-14 12:45:15] -rw------- 1 boinc boinc 152280920 Jan 14 12:43 HITS.48215263._030420.pool.root.1
[2026-01-14 12:45:15] -rw------- 1 boinc boinc      1024 Jan 14 12:44 memory_monitor_summary.json
[2026-01-14 12:45:15] -rw------- 1 boinc boinc        95 Jan 14 12:44 pilot_heartbeat.json
[2026-01-14 12:45:15] -rw------- 1 boinc boinc    267382 Jan 14 12:44 log.48215263._030420.job.log.tgz.1
[2026-01-14 12:45:15] -rw------- 1 boinc boinc      7761 Jan 14 12:44 heartbeat.json
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc      8192 Jan 14 12:44 boinc_mmap_file
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc        27 Jan 14 12:44 wrapper_checkpoint.txt
[2026-01-14 12:45:15] -rw------- 1 boinc boinc      4827 Jan 14 12:45 pilotlog.txt
[2026-01-14 12:45:15] -rw------- 1 boinc boinc    445184 Jan 14 12:45 log.48215263._030420.job.log.1
[2026-01-14 12:45:15] -rw------- 1 boinc boinc       357 Jan 14 12:45 output.list
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc       620 Jan 14 12:45 runtime_log
[2026-01-14 12:45:15] -rw------- 1 boinc boinc    727040 Jan 14 12:45 result.tar.gz
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc      8935 Jan 14 12:45 runtime_log.err
[2026-01-14 12:45:15] -rw------- 1 boinc boinc       645 Jan 14 12:45 qVLMDmmwJ08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZvlKDm01PCFm.diag
[2026-01-14 12:45:15] -rw-r--r-- 1 boinc boinc     22355 Jan 14 12:45 stderr.txt
[2026-01-14 12:45:15] HITS file was successfully produced:
[2026-01-14 12:45:15] -rw------- 1 boinc boinc 152280920 Jan 14 12:43 shared/HITS.pool.root.1
[2026-01-14 12:45:15]  *** Contents of shared directory: ***
[2026-01-14 12:45:15] total 735540
[2026-01-14 12:45:15] -rw-r--r-- 2 boinc boinc     15847 Jan 14 11:56 start_atlas.sh
[2026-01-14 12:45:15] -rw-r--r-- 2 boinc boinc    592410 Jan 14 11:56 input.tar.gz
[2026-01-14 12:45:15] -rw-r--r-- 2 boinc boinc 599562565 Jan 14 11:56 ATLAS.root_0
[2026-01-14 12:45:15] -rw------- 1 boinc boinc 152280920 Jan 14 12:43 HITS.pool.root.1
[2026-01-14 12:45:15] -rw------- 1 boinc boinc    727040 Jan 14 12:45 result.tar.gz
12:45:16 (276937): run_atlas exited; CPU time 13164.935829
12:45:16 (276937): called boinc_finish(0)

</stderr_txt>
]]>

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