Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:45:55 (4063353): wrapper (7.7.26015): starting
23:45:55 (4063353): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 23:45:55] Arguments: --nthreads 12
[2026-01-14 23:45:55] Threads: 12
[2026-01-14 23:45:55] Checking for CVMFS
[2026-01-14 23:45:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 23:45:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 23:45:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 23:45:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 23:45:56] 2.13.3.0 9099 7645 226960 155147 2 398 23650434 46080001 16138 130560 0 40846059 99.759 23860523 27792 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-14 23:45:56] CVMFS is ok
[2026-01-14 23:45:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 23:45:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 23:45:56] Further information can be found at the LHC@home message board.
[2026-01-14 23:45:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 23:45:56] Checking for apptainer binary...
[2026-01-14 23:45:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 23:45:56] Running /usr/bin/apptainer --version
[2026-01-14 23:45:56] apptainer version 1.4.5-2.el9
[2026-01-14 23:45:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 23:45:56] mff2104.farm.particle.cz
[2026-01-14 23:45:56] apptainer works
[2026-01-14 23:45:56] Set ATHENA_PROC_NUMBER=12
[2026-01-14 23:45:56] Set ATHENA_CORE_NUMBER=12
[2026-01-14 23:45:56] Starting ATLAS job with PandaID=6969419699
[2026-01-14 23:45:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 00:54:39]  *** The last 200 lines of the pilot log: ***
[2026-01-15 00:54:39] 2026-01-14 23:50:13,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:14,452 | INFO     | time since job start (3845s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:15,796 | INFO     | monitor loop #268: job 0:6969419699 is in state 'finished'
[2026-01-15 00:54:39] 2026-01-14 23:50:15,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:16,462 | INFO     | time since job start (3847s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:18,305 | INFO     | monitor loop #269: job 0:6969419699 is in state 'finished'
[2026-01-15 00:54:39] 2026-01-14 23:50:18,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:18,471 | INFO     | time since job start (3849s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:20,477 | INFO     | time since job start (3851s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:20,812 | INFO     | monitor loop #270: job 0:6969419699 is in state 'finished'
[2026-01-15 00:54:39] 2026-01-14 23:50:20,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:22,482 | INFO     | time since job start (3853s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:23,317 | INFO     | monitor loop #271: job 0:6969419699 is in state 'finished'
[2026-01-15 00:54:39] 2026-01-14 23:50:23,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:24,492 | INFO     | time since job start (3855s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:25,823 | INFO     | monitor loop #272: job 0:6969419699 is in state 'finished'
[2026-01-15 00:54:39] 2026-01-14 23:50:25,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:26,502 | INFO     | time since job start (3857s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:28,330 | INFO     | monitor loop #273: job 0:6969419699 is in state 'finished'
[2026-01-15 00:54:39] 2026-01-14 23:50:28,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:28,509 | INFO     | time since job start (3859s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:30,516 | INFO     | time since job start (3861s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:30,834 | INFO     | monitor loop #274: job 0:6969419699 is in state 'finished'
[2026-01-15 00:54:39] 2026-01-14 23:50:30,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:32,524 | INFO     | time since job start (3863s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:33,339 | INFO     | monitor loop #275: job 0:6969419699 is in state 'finished'
[2026-01-15 00:54:39] 2026-01-14 23:50:33,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:34,387 | INFO     | PID=4073457 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 00:54:39] 2026-01-14 23:50:34,387 | INFO     | .. there are 23 such processes running
[2026-01-15 00:54:39] 2026-01-14 23:50:35,389 | INFO     | time since job start (3866s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:35,843 | INFO     | monitor loop #276: job 0:6969419699 is in state 'finished'
[2026-01-15 00:54:39] 2026-01-14 23:50:35,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:37,400 | INFO     | time since job start (3868s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:38,350 | INFO     | monitor loop #277: job 0:6969419699 is in state 'finished'
[2026-01-15 00:54:39] 2026-01-14 23:50:38,350 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 00:54:39] 2026-01-14 23:50:39,406 | INFO     | time since job start (3870s) is within the limit (349056.0s)
[2026-01-15 00:54:39] 2026-01-14 23:50:39,414 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 00:54:39] 2026-01-14 23:50:39,446 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2744.834364583334
[2026-01-15 00:54:39] 2026-01-14 23:50:39,488 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6969419699/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 00:54:39] 2026-01-14 23:50:39,492 | INFO     | extracted standard info from prmon json
[2026-01-15 00:54:39] 2026-01-14 23:50:39,492 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 00:54:39] 2026-01-14 23:50:39,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 00:54:39] 2026-01-14 23:50:39,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 00:54:39] 2026-01-14 23:50:39,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 00:54:39] 2026-01-14 23:50:39,495 | INFO     | fitting pss+swap vs Time
[2026-01-15 00:54:39] 2026-01-14 23:50:39,496 | INFO     | sum of square deviations: 54436279.92857141
[2026-01-15 00:54:39] 2026-01-14 23:50:39,497 | INFO     | sum of deviations: 86815876.4642857
[2026-01-15 00:54:39] 2026-01-14 23:50:39,497 | INFO     | mean x: 1768432782.5357144
[2026-01-15 00:54:39] 2026-01-14 23:50:39,497 | INFO     | mean y: 2731944.0178571427
[2026-01-15 00:54:39] 2026-01-14 23:50:39,497 | INFO     | intersect: -2817593805.380623
[2026-01-15 00:54:39] 2026-01-14 23:50:39,497 | INFO     | chi2: 0.0017094635536224455
[2026-01-15 00:54:39] 2026-01-14 23:50:39,497 | INFO     | current memory leak: 1.59 B/s (using 56 data points, chi2=0.00)
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | could have reported an average CPU frequency of 2802 MHz (6 samples)
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | ..............................
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | . Timing measurements:
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | . get job = 0 s
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | . initial setup = 1 s
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | . payload setup = 7 s
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | . stage-in = 0 s
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | . payload execution = 3789 s
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | . stage-out = 1 s
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | . log creation = 0 s
[2026-01-15 00:54:39] 2026-01-14 23:50:39,498 | INFO     | ..............................
[2026-01-15 00:54:39] 2026-01-14 23:50:39,637 | INFO     | 
[2026-01-15 00:54:39] 2026-01-14 23:50:39,638 | INFO     | job summary report
[2026-01-15 00:54:39] 2026-01-14 23:50:39,638 | INFO     | --------------------------------------------------
[2026-01-15 00:54:39] 2026-01-14 23:50:39,639 | INFO     | PanDA job id: 6969419699
[2026-01-15 00:54:39] 2026-01-14 23:50:39,639 | INFO     | task id: 48215263
[2026-01-15 00:54:39] 2026-01-14 23:50:39,640 | INFO     | errors: (none)
[2026-01-15 00:54:39] 2026-01-14 23:50:39,640 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 00:54:39] 2026-01-14 23:50:39,640 | INFO     | pilot state: finished 
[2026-01-15 00:54:39] 2026-01-14 23:50:39,640 | INFO     | transexitcode: 0
[2026-01-15 00:54:39] 2026-01-14 23:50:39,641 | INFO     | exeerrorcode: 0
[2026-01-15 00:54:39] 2026-01-14 23:50:39,641 | INFO     | exeerrordiag: 
[2026-01-15 00:54:39] 2026-01-14 23:50:39,641 | INFO     | exitcode: 0
[2026-01-15 00:54:39] 2026-01-14 23:50:39,642 | INFO     | exitmsg: OK
[2026-01-15 00:54:39] 2026-01-14 23:50:39,642 | INFO     | cpuconsumptiontime: 23066 s
[2026-01-15 00:54:39] 2026-01-14 23:50:39,642 | INFO     | nevents: 400
[2026-01-15 00:54:39] 2026-01-14 23:50:39,642 | INFO     | neventsw: 0
[2026-01-15 00:54:39] 2026-01-14 23:50:39,642 | INFO     | pid: 4096440
[2026-01-15 00:54:39] 2026-01-14 23:50:39,642 | INFO     | pgrp: 4096440
[2026-01-15 00:54:39] 2026-01-14 23:50:39,643 | INFO     | corecount: 12
[2026-01-15 00:54:39] 2026-01-14 23:50:39,643 | INFO     | event service: False
[2026-01-15 00:54:39] 2026-01-14 23:50:39,644 | INFO     | sizes: {0: 2283949, 6: 2284211, 11: 2284239, 3802: 2310087, 3805: 2319143, 3854: 2319281}
[2026-01-15 00:54:39] 2026-01-14 23:50:39,644 | INFO     | --------------------------------------------------
[2026-01-15 00:54:39] 2026-01-14 23:50:39,644 | INFO     | 
[2026-01-15 00:54:39] 2026-01-14 23:50:39,645 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2026-01-15 00:54:39] 2026-01-14 23:50:39,792 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,792 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,794 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,794 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 00:54:39] 2026-01-14 23:50:39,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,794 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 00:54:39] 2026-01-14 23:50:39,794 | INFO     | job 6969419699 has completed (purged errors)
[2026-01-15 00:54:39] 2026-01-14 23:50:39,794 | INFO     | overall cleanup function is called
[2026-01-15 00:54:39] 2026-01-14 23:50:40,809 | INFO     | --- collectZombieJob: --- 10, [4096440]
[2026-01-15 00:54:39] 2026-01-14 23:50:40,809 | INFO     | zombie collector waiting for pid 4096440
[2026-01-15 00:54:39] 2026-01-14 23:50:40,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 00:54:39] 2026-01-14 23:50:40,809 | INFO     | collected zombie processes
[2026-01-15 00:54:39] 2026-01-14 23:50:40,809 | INFO     | will attempt to kill all subprocesses of pid=4096440
[2026-01-15 00:54:39] 2026-01-14 23:50:41,531 | INFO     | process IDs to be killed: [4096440] (in reverse order)
[2026-01-15 00:54:39] 2026-01-14 23:50:42,128 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 00:54:39] 2026-01-14 23:50:42,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 00:54:39] 2026-01-14 23:50:42,145 | INFO     | did not find any defunct processes belonging to 4096440
[2026-01-15 00:54:39] 2026-01-14 23:50:42,162 | INFO     | did not find any defunct processes belonging to 4096440
[2026-01-15 00:54:39] 2026-01-14 23:50:42,162 | INFO     | ready for new job
[2026-01-15 00:54:39] 2026-01-14 23:50:42,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 00:54:39] 2026-01-14 23:50:42,164 | INFO     | ***************************************
[2026-01-15 00:54:39] 2026-01-14 23:50:42,165 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 00:54:39] 2026-01-14 23:50:42,165 | INFO     | ***************************************
[2026-01-15 00:54:39] 2026-01-14 23:50:42,165 | INFO     | 
[2026-01-15 00:54:39] 2026-01-14 23:50:42,171 | INFO     | architecture information:
[2026-01-15 00:54:39] 2026-01-14 23:50:42,176 | INFO     | executing command: cat /etc/os-release
[2026-01-15 00:54:39] 2026-01-14 23:50:42,306 | INFO     | cat /etc/os-release:
[2026-01-15 00:54:39] NAME="CentOS Linux"
[2026-01-15 00:54:39] VERSION="7 (Core)"
[2026-01-15 00:54:39] ID="centos"
[2026-01-15 00:54:39] ID_LIKE="rhel fedora"
[2026-01-15 00:54:39] VERSION_ID="7"
[2026-01-15 00:54:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 00:54:39] ANSI_COLOR="0;31"
[2026-01-15 00:54:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 00:54:39] HOME_URL="https://www.centos.org/"
[2026-01-15 00:54:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 00:54:39] 
[2026-01-15 00:54:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 00:54:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 00:54:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 00:54:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 00:54:39] 
[2026-01-15 00:54:39] 2026-01-14 23:50:42,307 | INFO     | ***************************************
[2026-01-15 00:54:39] 2026-01-14 23:50:42,812 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2026-01-15 00:54:39] 2026-01-14 23:50:42,937 | INFO     | sufficient remaining disk space (1478805684224 B)
[2026-01-15 00:54:39] 2026-01-14 23:50:42,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 00:54:39] 2026-01-14 23:50:42,937 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 00:54:39] 2026-01-14 23:50:42,937 | INFO     | update_server=False
[2026-01-15 00:54:39] 2026-01-14 23:50:42,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 00:54:39] 2026-01-14 23:50:42,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 00:54:39] 2026-01-14 23:50:43,368 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 00:54:39] 2026-01-14 23:50:43,368 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 00:54:39] 2026-01-14 23:50:43,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 00:54:39] 2026-01-14 23:50:43,368 | INFO     | will abort loop
[2026-01-15 00:54:39] 2026-01-14 23:50:43,515 | INFO     | all data control threads have been joined
[2026-01-15 00:54:39] 2026-01-14 23:50:43,944 | INFO     | [job] retrieve thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:43,947 | INFO     | all job control threads have been joined
[2026-01-15 00:54:39] 2026-01-14 23:50:43,994 | INFO     | [payload] validate_post thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:44,026 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:44,184 | INFO     | all payload control threads have been joined
[2026-01-15 00:54:39] 2026-01-14 23:50:44,376 | INFO     | [job] job monitor thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:44,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 00:54:39] 2026-01-14 23:50:44,521 | INFO     | [data] control thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:44,547 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:44,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 00:54:39] 2026-01-14 23:50:44,715 | INFO     | [payload] failed_post thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:44,786 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:44,926 | INFO     | [job] validate thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:44,956 | INFO     | [job] control thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:45,121 | INFO     | [data] copytool_in thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:45,190 | INFO     | [payload] control thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:45,424 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:45,659 | INFO     | [job] queue monitor thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:46,427 | INFO     | [data] copytool_out thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:50:46,949 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 00:54:39] 2026-01-14 23:51:13,176 | INFO     | PID=4073457 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 00:54:39] 2026-01-14 23:51:13,176 | INFO     | .. there are 23 such processes running
[2026-01-15 00:54:39] 2026-01-14 23:51:13,176 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 00:54:39] 2026-01-14 23:51:13,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 00:54:39] 2026-01-14 23:51:13,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 00:54:39] 2026-01-14 23:51:15,447 | INFO     | [monitor] cgroup control has ended
[2026-01-15 00:54:39] 2026-01-14 23:51:17,316 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633667209024)>', '<ExcThread(monitor, started 140633293432576)>']
[2026-01-15 00:54:39] 2026-01-14 23:51:18,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 00:54:39] 2026-01-14 23:51:18,207 | INFO     | [monitor] control thread has ended
[2026-01-15 00:54:39] 2026-01-14 23:51:22,342 | INFO     | all workflow threads have been joined
[2026-01-15 00:54:39] 2026-01-14 23:51:22,342 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 00:54:39] 2026-01-14 23:51:22,342 | INFO     | traces error code: 0
[2026-01-15 00:54:39] 2026-01-14 23:51:22,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 00:54:39] 2026-01-14 23:51:22,862 [wrapper] ==== pilot stdout END ====
[2026-01-15 00:54:39] 2026-01-14 23:51:22,908 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 00:54:39] 2026-01-14 23:51:22,938 [wrapper] pilotpid: 4073457
[2026-01-15 00:54:39] 2026-01-14 23:51:22,979 [wrapper] Pilot exit status: 0
[2026-01-15 00:54:39] 2026-01-14 23:51:23,149 [wrapper] pandaids: 6969419699
[2026-01-15 00:54:39] 2026-01-14 23:51:23,587 [wrapper] cleanup supervisor_pilot   94358 4073458
[2026-01-15 00:54:39] 2026-01-14 23:51:23,607 [wrapper] Test setup, not cleaning
[2026-01-15 00:54:39] 2026-01-14 23:51:23,650 [wrapper] apfmon messages muted
[2026-01-15 00:54:39] 2026-01-14 23:51:23,685 [wrapper] ==== wrapper stdout END ====
[2026-01-15 00:54:39] 2026-01-14 23:51:23,727 [wrapper] ==== wrapper stderr END ====
[2026-01-15 00:54:39]  *** Error codes and diagnostics ***
[2026-01-15 00:54:39]     "exeErrorCode": 0,
[2026-01-15 00:54:39]     "exeErrorDiag": "",
[2026-01-15 00:54:39]     "pilotErrorCode": 0,
[2026-01-15 00:54:39]     "pilotErrorDiag": "",
[2026-01-15 00:54:39]  *** Listing of results directory ***
[2026-01-15 00:54:39] total 726928
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc    579449 Jan 14 10:29 pilot3.tar.gz
[2026-01-15 00:54:39] -rwx------ 1 boinc boinc     36322 Jan 14 10:31 runpilot2-wrapper.sh
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc      5112 Jan 14 10:31 queuedata.json
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc       100 Jan 14 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 00:54:39] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 23:45 run_atlas
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc       105 Jan 14 23:45 job.xml
[2026-01-15 00:54:39] -rw-r--r-- 2 boinc boinc 595971985 Jan 14 23:45 EVNT.32794306._000796.pool.root.1
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc      6676 Jan 14 23:45 init_data.xml
[2026-01-15 00:54:39] -rw-r--r-- 2 boinc boinc     15847 Jan 14 23:45 start_atlas.sh
[2026-01-15 00:54:39] drwxrwx--x 2 boinc boinc      4096 Jan 14 23:45 shared
[2026-01-15 00:54:39] -rw-r--r-- 2 boinc boinc    592397 Jan 14 23:45 input.tar.gz
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc         0 Jan 14 23:45 boinc_lockfile
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc      2506 Jan 14 23:45 pandaJob.out
[2026-01-15 00:54:39] -rw------- 1 boinc boinc    999472 Jan 14 23:46 agis_schedconf.cvmfs.json
[2026-01-15 00:54:39] -rw------- 1 boinc boinc   1516246 Jan 14 23:46 agis_ddmendpoints.agis.ALL.json
[2026-01-15 00:54:39] drwx------ 5 boinc boinc      4096 Jan 14 23:46 pilot3
[2026-01-15 00:54:39] -rw------- 1 boinc boinc 142611580 Jan 15 00:48 HITS.48215263._019863.pool.root.1
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc       530 Jan 15 00:48 boinc_task_state.xml
[2026-01-15 00:54:39] -rw------- 1 boinc boinc      1023 Jan 15 00:49 memory_monitor_summary.json
[2026-01-15 00:54:39] -rw------- 1 boinc boinc    368206 Jan 15 00:49 log.48215263._019863.job.log.tgz.1
[2026-01-15 00:54:39] -rw------- 1 boinc boinc        95 Jan 15 00:50 pilot_heartbeat.json
[2026-01-15 00:54:39] -rw------- 1 boinc boinc      7773 Jan 15 00:50 heartbeat.json
[2026-01-15 00:54:39] -rw------- 1 boinc boinc      5013 Jan 15 00:51 pilotlog.txt
[2026-01-15 00:54:39] -rw------- 1 boinc boinc    562731 Jan 15 00:51 log.48215263._019863.job.log.1
[2026-01-15 00:54:39] -rw------- 1 boinc boinc       357 Jan 15 00:51 output.list
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc       620 Jan 15 00:51 runtime_log
[2026-01-15 00:54:39] -rw------- 1 boinc boinc    952320 Jan 15 00:51 result.tar.gz
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc      8880 Jan 15 00:51 runtime_log.err
[2026-01-15 00:54:39] -rw------- 1 boinc boinc       663 Jan 15 00:51 Gh0MDmtOC08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZckKDmXWviqm.diag
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc        26 Jan 15 00:54 wrapper_checkpoint.txt
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc      8192 Jan 15 00:54 boinc_mmap_file
[2026-01-15 00:54:39] -rw-r--r-- 1 boinc boinc     22374 Jan 15 00:54 stderr.txt
[2026-01-15 00:54:39] HITS file was successfully produced:
[2026-01-15 00:54:39] -rw------- 1 boinc boinc 142611580 Jan 15 00:48 shared/HITS.pool.root.1
[2026-01-15 00:54:39]  *** Contents of shared directory: ***
[2026-01-15 00:54:39] total 722812
[2026-01-15 00:54:39] -rw-r--r-- 2 boinc boinc 595971985 Jan 14 23:45 ATLAS.root_0
[2026-01-15 00:54:39] -rw-r--r-- 2 boinc boinc     15847 Jan 14 23:45 start_atlas.sh
[2026-01-15 00:54:39] -rw-r--r-- 2 boinc boinc    592397 Jan 14 23:45 input.tar.gz
[2026-01-15 00:54:39] -rw------- 1 boinc boinc 142611580 Jan 15 00:48 HITS.pool.root.1
[2026-01-15 00:54:39] -rw------- 1 boinc boinc    952320 Jan 15 00:51 result.tar.gz
00:54:41 (4063353): run_atlas exited; CPU time 23150.254851
00:54:41 (4063353): called boinc_finish(0)

</stderr_txt>
]]>

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