Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:04:21 (1556578): wrapper (7.7.26015): starting
21:04:21 (1556578): wrapper: running run_atlas (--nthreads 3)
[2026-01-14 21:04:21] Arguments: --nthreads 3
[2026-01-14 21:04:21] Threads: 3
[2026-01-14 21:04:21] Checking for CVMFS
[2026-01-14 21:04:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 21:04:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 21:04:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 21:04:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 21:04:21] 2.9.2.0 1053361 1227 79636 155142 2 57 22784997 36864000 0 130560 0 1325243 99.993 45496 24264 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 21:04:21] CVMFS is ok
[2026-01-14 21:04:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 21:04:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 21:04:21] Further information can be found at the LHC@home message board.
[2026-01-14 21:04:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 21:04:21] Checking for apptainer binary...
[2026-01-14 21:04:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 21:04:21] Running /usr/bin/apptainer --version
[2026-01-14 21:04:21] apptainer version 1.4.1-1.1
[2026-01-14 21:04:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 21:04:21] magicA246a
[2026-01-14 21:04:21] apptainer works
[2026-01-14 21:04:21] Set ATHENA_PROC_NUMBER=3
[2026-01-14 21:04:21] Set ATHENA_CORE_NUMBER=3
[2026-01-14 21:04:21] Starting ATLAS job with PandaID=6969484370
[2026-01-14 21:04:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 22:01:37]  *** The last 200 lines of the pilot log: ***
[2026-01-14 22:01:37] 2026-01-14 21:00:36,326 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 22:01:37] 2026-01-14 21:00:36,326 | INFO     | update_server=False
[2026-01-14 22:01:37] 2026-01-14 21:00:36,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 22:01:37] 2026-01-14 21:00:36,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 22:01:37] 2026-01-14 21:00:36,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 22:01:37] 2026-01-14 21:00:36,326 | INFO     | aborting loop
[2026-01-14 22:01:37] 2026-01-14 21:00:36,400 | INFO     | all payload control threads have been joined
[2026-01-14 22:01:37] 2026-01-14 21:00:37,190 | INFO     | all data control threads have been joined
[2026-01-14 22:01:37] 2026-01-14 21:00:37,331 | INFO     | [job] retrieve thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:37,332 | INFO     | [job] job monitor thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:37,380 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:37,404 | INFO     | [payload] control thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:37,423 | INFO     | [payload] validate_post thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:37,488 | INFO     | all job control threads have been joined
[2026-01-14 22:01:37] 2026-01-14 21:00:37,626 | INFO     | [payload] failed_post thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:38,195 | INFO     | [data] control thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:38,196 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:38,301 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:38,332 | INFO     | [data] copytool_out thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:38,337 | INFO     | [data] copytool_in thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:38,494 | INFO     | [job] control thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:38,731 | INFO     | [job] validate thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:38,786 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:39,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 22:01:37] 2026-01-14 21:00:39,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 22:01:37] 2026-01-14 21:00:40,326 | INFO     | [job] queue monitor thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:00:43,188 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 22:01:37] 2026-01-14 21:01:06,484 | INFO     | PID=1560298 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 22:01:37] 2026-01-14 21:01:06,484 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 22:01:37] 2026-01-14 21:01:06,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 22:01:37] 2026-01-14 21:01:06,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 22:01:37] 2026-01-14 21:01:30,789 | INFO     | [monitor] cgroup control has ended
[2026-01-14 22:01:37] 2026-01-14 21:01:32,346 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624249030464)>', '<ExcThread(monitor, started 139623967721216)>']
[2026-01-14 22:01:37] 2026-01-14 21:01:32,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 22:01:37] 2026-01-14 21:01:32,612 | INFO     | [monitor] control thread has ended
[2026-01-14 22:01:37] 2026-01-14 21:01:37,372 | INFO     | all workflow threads have been joined
[2026-01-14 22:01:37] 2026-01-14 21:01:37,372 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 22:01:37] 2026-01-14 21:01:37,372 | INFO     | traces error code: 0
[2026-01-14 22:01:37] 2026-01-14 21:01:37,373 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 22:01:37] 2026-01-14 21:01:37,424 [wrapper] ==== pilot stdout END ====
[2026-01-14 22:01:37] 2026-01-14 21:01:37,427 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 22:01:37] 2026-01-14 21:01:37,429 [wrapper] pilotpid: 1560298
[2026-01-14 22:01:37] 2026-01-14 21:01:37,431 [wrapper] Pilot exit status: 0
[2026-01-14 22:01:37] 2026-01-14 21:01:37,439 [wrapper] pandaids: 6969484370
[2026-01-14 22:01:37] 2026-01-14 21:01:37,459 [wrapper] cleanup supervisor_pilot 1576656 1560299
[2026-01-14 22:01:37] 2026-01-14 21:01:37,461 [wrapper] Test setup, not cleaning
[2026-01-14 22:01:37] 2026-01-14 21:01:37,464 [wrapper] apfmon messages muted
[2026-01-14 22:01:37] 2026-01-14 21:01:37,466 [wrapper] ==== wrapper stdout END ====
[2026-01-14 22:01:37] 2026-01-14 21:01:37,468 [wrapper] ==== wrapper stderr END ====
[2026-01-14 22:01:37]  *** Error codes and diagnostics ***
[2026-01-14 22:01:37]     "exeErrorCode": 0,
[2026-01-14 22:01:37]     "exeErrorDiag": "",
[2026-01-14 22:01:37]     "pilotErrorCode": 0,
[2026-01-14 22:01:37]     "pilotErrorDiag": "",
[2026-01-14 22:01:37]  *** Listing of results directory ***
[2026-01-14 22:01:37] total 738780
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc    579449 Jan 14 15:17 pilot3.tar.gz
[2026-01-14 22:01:37] -rwx------ 1 boinc boinc     36322 Jan 14 15:19 runpilot2-wrapper.sh
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc      5112 Jan 14 15:21 queuedata.json
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc       100 Jan 14 21:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 22:01:37] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 21:04 run_atlas
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc       105 Jan 14 21:04 job.xml
[2026-01-14 22:01:37] -rw-r--r-- 2 boinc boinc 595199644 Jan 14 21:04 EVNT.32794306._001028.pool.root.1
[2026-01-14 22:01:37] drwxrwx--x 2 boinc boinc      4096 Jan 14 21:04 shared
[2026-01-14 22:01:37] -rw-r--r-- 2 boinc boinc    592406 Jan 14 21:04 input.tar.gz
[2026-01-14 22:01:37] -rw-r--r-- 2 boinc boinc     15847 Jan 14 21:04 start_atlas.sh
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc         0 Jan 14 21:04 boinc_setup_complete
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc      6447 Jan 14 21:04 init_data.xml
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc         0 Jan 14 21:04 boinc_lockfile
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc      2508 Jan 14 21:04 pandaJob.out
[2026-01-14 22:01:37] -rw------- 1 boinc boinc    998072 Jan 14 21:04 agis_schedconf.cvmfs.json
[2026-01-14 22:01:37] -rw------- 1 boinc boinc   1516246 Jan 14 21:04 agis_ddmendpoints.agis.ALL.json
[2026-01-14 22:01:37] drwx------ 5 boinc boinc      4096 Jan 14 21:04 pilot3
[2026-01-14 22:01:37] -rw------- 1 boinc boinc 155945083 Jan 14 22:00 HITS.48215263._025665.pool.root.1
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc       529 Jan 14 22:00 boinc_task_state.xml
[2026-01-14 22:01:37] -rw------- 1 boinc boinc      1010 Jan 14 22:00 memory_monitor_summary.json
[2026-01-14 22:01:37] -rw------- 1 boinc boinc    219271 Jan 14 22:00 log.48215263._025665.job.log.tgz.1
[2026-01-14 22:01:37] -rw------- 1 boinc boinc      7742 Jan 14 22:00 heartbeat.json
[2026-01-14 22:01:37] -rw------- 1 boinc boinc        95 Jan 14 22:01 pilot_heartbeat.json
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc        26 Jan 14 22:01 wrapper_checkpoint.txt
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc      8192 Jan 14 22:01 boinc_mmap_file
[2026-01-14 22:01:37] -rw------- 1 boinc boinc      4752 Jan 14 22:01 pilotlog.txt
[2026-01-14 22:01:37] -rw------- 1 boinc boinc    511261 Jan 14 22:01 log.48215263._025665.job.log.1
[2026-01-14 22:01:37] -rw------- 1 boinc boinc       357 Jan 14 22:01 output.list
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc       620 Jan 14 22:01 runtime_log
[2026-01-14 22:01:37] -rw------- 1 boinc boinc    747520 Jan 14 22:01 result.tar.gz
[2026-01-14 22:01:37] -rw------- 1 boinc boinc       660 Jan 14 22:01 xFEODmOtG08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvHlKDmwk50Ko.diag
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc      8917 Jan 14 22:01 runtime_log.err
[2026-01-14 22:01:37] -rw-r--r-- 1 boinc boinc      7522 Jan 14 22:01 stderr.txt
[2026-01-14 22:01:37] HITS file was successfully produced:
[2026-01-14 22:01:37] -rw------- 1 boinc boinc 155945083 Jan 14 22:00 shared/HITS.pool.root.1
[2026-01-14 22:01:37]  *** Contents of shared directory: ***
[2026-01-14 22:01:37] total 734880
[2026-01-14 22:01:37] -rw-r--r-- 2 boinc boinc 595199644 Jan 14 21:04 ATLAS.root_0
[2026-01-14 22:01:37] -rw-r--r-- 2 boinc boinc    592406 Jan 14 21:04 input.tar.gz
[2026-01-14 22:01:37] -rw-r--r-- 2 boinc boinc     15847 Jan 14 21:04 start_atlas.sh
[2026-01-14 22:01:37] -rw------- 1 boinc boinc 155945083 Jan 14 22:00 HITS.pool.root.1
[2026-01-14 22:01:37] -rw------- 1 boinc boinc    747520 Jan 14 22:01 result.tar.gz
22:01:38 (1556578): run_atlas exited; CPU time 9442.754735
22:01:38 (1556578): called boinc_finish(0)

</stderr_txt>
]]>

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