Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
18:22:11 (459785): wrapper (7.7.26015): starting
18:22:11 (459785): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 18:22:11] Arguments: --nthreads 8
[2026-01-14 18:22:11] Threads: 8
[2026-01-14 18:22:11] Checking for CVMFS
[2026-01-14 18:22:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 18:22:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 18:22:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 18:22:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 18:22:12] 2.13.3.0 435425 72 45576 155140 0 56 3188722 4096000 0 130560 0 67158 99.987 2764 113 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-14 18:22:12] CVMFS is ok
[2026-01-14 18:22:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 18:22:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 18:22:12] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-14 18:22:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-14 18:22:12] Further information can be found at the LHC@home message board.
[2026-01-14 18:22:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 18:22:12] Checking for apptainer binary...
[2026-01-14 18:22:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 18:22:12] Running /usr/bin/apptainer --version
[2026-01-14 18:22:12] apptainer version 1.4.5
[2026-01-14 18:22:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 18:22:12] lab01ubuntu
[2026-01-14 18:22:12] apptainer works
[2026-01-14 18:22:12] Set ATHENA_PROC_NUMBER=8
[2026-01-14 18:22:12] Set ATHENA_CORE_NUMBER=8
[2026-01-14 18:22:12] Starting ATLAS job with PandaID=6969468944
[2026-01-14 18:22:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 19:32:56]  *** The last 200 lines of the pilot log: ***
[2026-01-14 19:32:56] 2026-01-14 19:32:04,231 | INFO     | stage-out finished correctly
[2026-01-14 19:32:56] 2026-01-14 19:32:04,416 | INFO     | time since job start (4171s) is within the limit (349056.0s)
[2026-01-14 19:32:56] 2026-01-14 19:32:05,402 | INFO     | monitor loop #323: job 0:6969468944 is in state 'finished'
[2026-01-14 19:32:56] 2026-01-14 19:32:05,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:32:56] 2026-01-14 19:32:05,405 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 19:32:56] 2026-01-14 19:32:05,912 | INFO     | job 6969468944 has state=finished
[2026-01-14 19:32:56] 2026-01-14 19:32:05,913 | INFO     | preparing for final server update for job 6969468944 in state='finished'
[2026-01-14 19:32:56] 2026-01-14 19:32:05,914 | INFO     | this job has now completed (state=finished)
[2026-01-14 19:32:56] 2026-01-14 19:32:05,914 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 19:32:56] 2026-01-14 19:32:05,915 | INFO     | log transfer has been attempted: DONE
[2026-01-14 19:32:56] 2026-01-14 19:32:05,915 | INFO     | job 6969468944 has finished - writing final server update
[2026-01-14 19:32:56] 2026-01-14 19:32:05,916 | INFO     | total number of processed events: 400 (read)
[2026-01-14 19:32:56] 2026-01-14 19:32:05,918 | INFO     | executing command: lscpu
[2026-01-14 19:32:56] 2026-01-14 19:32:05,966 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 19:32:56] 2026-01-14 19:32:06,429 | INFO     | time since job start (4173s) is within the limit (349056.0s)
[2026-01-14 19:32:56] 2026-01-14 19:32:07,907 | INFO     | monitor loop #324: job 0:6969468944 is in state 'finished'
[2026-01-14 19:32:56] 2026-01-14 19:32:07,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:32:56] 2026-01-14 19:32:08,436 | INFO     | time since job start (4175s) is within the limit (349056.0s)
[2026-01-14 19:32:56] 2026-01-14 19:32:10,411 | INFO     | monitor loop #325: job 0:6969468944 is in state 'finished'
[2026-01-14 19:32:56] 2026-01-14 19:32:10,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:32:56] 2026-01-14 19:32:10,438 | INFO     | time since job start (4177s) is within the limit (349056.0s)
[2026-01-14 19:32:56] 2026-01-14 19:32:12,444 | INFO     | time since job start (4179s) is within the limit (349056.0s)
[2026-01-14 19:32:56] 2026-01-14 19:32:12,917 | INFO     | monitor loop #326: job 0:6969468944 is in state 'finished'
[2026-01-14 19:32:56] 2026-01-14 19:32:12,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:32:56] 2026-01-14 19:32:14,451 | INFO     | time since job start (4181s) is within the limit (349056.0s)
[2026-01-14 19:32:56] 2026-01-14 19:32:15,421 | INFO     | monitor loop #327: job 0:6969468944 is in state 'finished'
[2026-01-14 19:32:56] 2026-01-14 19:32:15,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:32:56] 2026-01-14 19:32:16,457 | INFO     | time since job start (4183s) is within the limit (349056.0s)
[2026-01-14 19:32:56] 2026-01-14 19:32:17,926 | INFO     | monitor loop #328: job 0:6969468944 is in state 'finished'
[2026-01-14 19:32:56] 2026-01-14 19:32:17,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:32:56] 2026-01-14 19:32:18,463 | INFO     | time since job start (4185s) is within the limit (349056.0s)
[2026-01-14 19:32:56] 2026-01-14 19:32:20,430 | INFO     | monitor loop #329: job 0:6969468944 is in state 'finished'
[2026-01-14 19:32:56] 2026-01-14 19:32:20,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:32:56] 2026-01-14 19:32:20,468 | INFO     | time since job start (4187s) is within the limit (349056.0s)
[2026-01-14 19:32:56] 2026-01-14 19:32:21,647 | INFO     | PID=463502 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 19:32:56] 2026-01-14 19:32:22,647 | INFO     | time since job start (4189s) is within the limit (349056.0s)
[2026-01-14 19:32:56] 2026-01-14 19:32:22,934 | INFO     | monitor loop #330: job 0:6969468944 is in state 'finished'
[2026-01-14 19:32:56] 2026-01-14 19:32:22,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:32:56] 2026-01-14 19:32:23,450 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 19:32:56] 2026-01-14 19:32:23,452 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 2893.0279999999993
[2026-01-14 19:32:56] 2026-01-14 19:32:23,455 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6969468944/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 19:32:56] 2026-01-14 19:32:23,457 | INFO     | extracted standard info from prmon json
[2026-01-14 19:32:56] 2026-01-14 19:32:23,458 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 19:32:56] 2026-01-14 19:32:23,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 19:32:56] 2026-01-14 19:32:23,459 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 19:32:56] 2026-01-14 19:32:23,459 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 19:32:56] 2026-01-14 19:32:23,463 | INFO     | fitting pss+swap vs Time
[2026-01-14 19:32:56] 2026-01-14 19:32:23,464 | INFO     | sum of square deviations: 70364110.0
[2026-01-14 19:32:56] 2026-01-14 19:32:23,465 | INFO     | sum of deviations: -5814119291.0
[2026-01-14 19:32:56] 2026-01-14 19:32:23,465 | INFO     | mean x: 1768417146.0
[2026-01-14 19:32:56] 2026-01-14 19:32:23,466 | INFO     | mean y: 2784564.0655737706
[2026-01-14 19:32:56] 2026-01-14 19:32:23,466 | INFO     | intersect: 146125406495.81125
[2026-01-14 19:32:56] 2026-01-14 19:32:23,467 | INFO     | chi2: 0.4804141483910931
[2026-01-14 19:32:56] 2026-01-14 19:32:23,467 | INFO     | current memory leak: -82.63 B/s (using 61 data points, chi2=0.48)
[2026-01-14 19:32:56] 2026-01-14 19:32:23,468 | INFO     | could have reported an average CPU frequency of 2893 MHz (6 samples)
[2026-01-14 19:32:56] 2026-01-14 19:32:23,468 | INFO     | ..............................
[2026-01-14 19:32:56] 2026-01-14 19:32:23,469 | INFO     | . Timing measurements:
[2026-01-14 19:32:56] 2026-01-14 19:32:23,469 | INFO     | . get job = 0 s
[2026-01-14 19:32:56] 2026-01-14 19:32:23,469 | INFO     | . initial setup = 4 s
[2026-01-14 19:32:56] 2026-01-14 19:32:23,469 | INFO     | . payload setup = 15 s
[2026-01-14 19:32:56] 2026-01-14 19:32:23,470 | INFO     | . stage-in = 0 s
[2026-01-14 19:32:56] 2026-01-14 19:32:23,470 | INFO     | . payload execution = 4116 s
[2026-01-14 19:32:56] 2026-01-14 19:32:23,470 | INFO     | . stage-out = 1 s
[2026-01-14 19:32:56] 2026-01-14 19:32:23,471 | INFO     | . log creation = 0 s
[2026-01-14 19:32:56] 2026-01-14 19:32:23,471 | INFO     | ..............................
[2026-01-14 19:32:56] 2026-01-14 19:32:23,629 | INFO     | 
[2026-01-14 19:32:56] 2026-01-14 19:32:23,630 | INFO     | job summary report
[2026-01-14 19:32:56] 2026-01-14 19:32:23,630 | INFO     | --------------------------------------------------
[2026-01-14 19:32:56] 2026-01-14 19:32:23,630 | INFO     | PanDA job id: 6969468944
[2026-01-14 19:32:56] 2026-01-14 19:32:23,630 | INFO     | task id: 48215263
[2026-01-14 19:32:56] 2026-01-14 19:32:23,631 | INFO     | errors: (none)
[2026-01-14 19:32:56] 2026-01-14 19:32:23,631 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 19:32:56] 2026-01-14 19:32:23,631 | INFO     | pilot state: finished 
[2026-01-14 19:32:56] 2026-01-14 19:32:23,632 | INFO     | transexitcode: 0
[2026-01-14 19:32:56] 2026-01-14 19:32:23,632 | INFO     | exeerrorcode: 0
[2026-01-14 19:32:56] 2026-01-14 19:32:23,632 | INFO     | exeerrordiag: 
[2026-01-14 19:32:56] 2026-01-14 19:32:23,632 | INFO     | exitcode: 0
[2026-01-14 19:32:56] 2026-01-14 19:32:23,633 | INFO     | exitmsg: OK
[2026-01-14 19:32:56] 2026-01-14 19:32:23,633 | INFO     | cpuconsumptiontime: 28533 s
[2026-01-14 19:32:56] 2026-01-14 19:32:23,633 | INFO     | nevents: 400
[2026-01-14 19:32:56] 2026-01-14 19:32:23,633 | INFO     | neventsw: 0
[2026-01-14 19:32:56] 2026-01-14 19:32:23,634 | INFO     | pid: 469924
[2026-01-14 19:32:56] 2026-01-14 19:32:23,634 | INFO     | pgrp: 469924
[2026-01-14 19:32:56] 2026-01-14 19:32:23,634 | INFO     | corecount: 8
[2026-01-14 19:32:56] 2026-01-14 19:32:23,634 | INFO     | event service: False
[2026-01-14 19:32:56] 2026-01-14 19:32:23,635 | INFO     | sizes: {0: 2283785, 1: 2283984, 12: 2283984, 14: 2284274, 22: 2284302, 4135: 2310172, 4136: 2310299, 4138: 2319367, 4139: 2319423, 4157: 2319617}
[2026-01-14 19:32:56] 2026-01-14 19:32:23,635 | INFO     | --------------------------------------------------
[2026-01-14 19:32:56] 2026-01-14 19:32:23,635 | INFO     | 
[2026-01-14 19:32:56] 2026-01-14 19:32:23,636 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-01-14 19:32:56] 2026-01-14 19:32:23,687 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,688 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,688 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,688 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,689 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,692 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 19:32:56] 2026-01-14 19:32:23,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,693 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 19:32:56] 2026-01-14 19:32:23,694 | INFO     | job 6969468944 has completed (purged errors)
[2026-01-14 19:32:56] 2026-01-14 19:32:23,694 | INFO     | overall cleanup function is called
[2026-01-14 19:32:56] 2026-01-14 19:32:24,706 | INFO     | --- collectZombieJob: --- 10, [469924]
[2026-01-14 19:32:56] 2026-01-14 19:32:24,707 | INFO     | zombie collector waiting for pid 469924
[2026-01-14 19:32:56] 2026-01-14 19:32:24,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 19:32:56] 2026-01-14 19:32:24,723 | INFO     | collected zombie processes
[2026-01-14 19:32:56] 2026-01-14 19:32:24,724 | INFO     | will attempt to kill all subprocesses of pid=469924
[2026-01-14 19:32:56] 2026-01-14 19:32:24,874 | INFO     | process IDs to be killed: [469924] (in reverse order)
[2026-01-14 19:32:56] 2026-01-14 19:32:24,959 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 19:32:56] 2026-01-14 19:32:24,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 19:32:56] 2026-01-14 19:32:24,962 | INFO     | did not find any defunct processes belonging to 469924
[2026-01-14 19:32:56] 2026-01-14 19:32:24,964 | INFO     | did not find any defunct processes belonging to 469924
[2026-01-14 19:32:56] 2026-01-14 19:32:24,964 | INFO     | ready for new job
[2026-01-14 19:32:56] 2026-01-14 19:32:24,964 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 19:32:56] 2026-01-14 19:32:25,161 | INFO     | ***************************************
[2026-01-14 19:32:56] 2026-01-14 19:32:25,161 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 19:32:56] 2026-01-14 19:32:25,162 | INFO     | ***************************************
[2026-01-14 19:32:56] 2026-01-14 19:32:25,162 | INFO     | 
[2026-01-14 19:32:56] 2026-01-14 19:32:25,163 | INFO     | pilot is running in a VM
[2026-01-14 19:32:56] 2026-01-14 19:32:25,163 | INFO     | architecture information:
[2026-01-14 19:32:56] 2026-01-14 19:32:25,164 | INFO     | executing command: cat /etc/os-release
[2026-01-14 19:32:56] 2026-01-14 19:32:25,198 | INFO     | cat /etc/os-release:
[2026-01-14 19:32:56] NAME="CentOS Linux"
[2026-01-14 19:32:56] VERSION="7 (Core)"
[2026-01-14 19:32:56] ID="centos"
[2026-01-14 19:32:56] ID_LIKE="rhel fedora"
[2026-01-14 19:32:56] VERSION_ID="7"
[2026-01-14 19:32:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 19:32:56] ANSI_COLOR="0;31"
[2026-01-14 19:32:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 19:32:56] HOME_URL="https://www.centos.org/"
[2026-01-14 19:32:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 19:32:56] 
[2026-01-14 19:32:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 19:32:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 19:32:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 19:32:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 19:32:56] 
[2026-01-14 19:32:56] 2026-01-14 19:32:25,199 | INFO     | ***************************************
[2026-01-14 19:32:56] 2026-01-14 19:32:25,703 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-01-14 19:32:56] 2026-01-14 19:32:25,739 | INFO     | sufficient remaining disk space (13172211712 B)
[2026-01-14 19:32:56] 2026-01-14 19:32:25,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 19:32:56] 2026-01-14 19:32:25,740 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 19:32:56] 2026-01-14 19:32:25,740 | INFO     | update_server=False
[2026-01-14 19:32:56] 2026-01-14 19:32:25,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 19:32:56] 2026-01-14 19:32:25,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 19:32:56] 2026-01-14 19:32:25,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 19:32:56] 2026-01-14 19:32:26,170 | INFO     | all payload control threads have been joined
[2026-01-14 19:32:56] 2026-01-14 19:32:26,425 | INFO     | all job control threads have been joined
[2026-01-14 19:32:56] 2026-01-14 19:32:26,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 19:32:56] 2026-01-14 19:32:26,444 | INFO     | aborting loop
[2026-01-14 19:32:56] 2026-01-14 19:32:26,488 | INFO     | all data control threads have been joined
[2026-01-14 19:32:56] 2026-01-14 19:32:26,747 | INFO     | [job] retrieve thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:26,834 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:26,839 | INFO     | [payload] validate_post thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:27,177 | INFO     | [payload] control thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:27,185 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:27,431 | INFO     | [job] control thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:27,450 | INFO     | [job] job monitor thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:27,494 | INFO     | [data] control thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:27,599 | INFO     | [job] validate thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:27,748 | INFO     | [data] copytool_out thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:27,819 | INFO     | [payload] failed_post thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:28,082 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:28,160 | INFO     | [data] copytool_in thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:28,179 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:28,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 19:32:56] 2026-01-14 19:32:29,646 | INFO     | [job] queue monitor thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:29,750 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 19:32:56] 2026-01-14 19:32:39,611 | INFO     | [monitor] cgroup control has ended
[2026-01-14 19:32:56] 2026-01-14 19:32:40,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134675912734528)>', '<ExcThread(monitor, started 134675630622464)>']
[2026-01-14 19:32:56] 2026-01-14 19:32:45,214 | INFO     | all workflow threads have been joined
[2026-01-14 19:32:56] 2026-01-14 19:32:45,214 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 19:32:56] 2026-01-14 19:32:45,215 | INFO     | traces error code: 0
[2026-01-14 19:32:56] 2026-01-14 19:32:45,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 19:32:56] 2026-01-14 19:32:55,873 | INFO     | PID=463502 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 19:32:56] 2026-01-14 19:32:55,874 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 19:32:56] 2026-01-14 19:32:55,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 19:32:56] 2026-01-14 19:32:55,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 19:32:56] 2026-01-14 19:32:55,874 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 19:32:56] 2026-01-14 19:32:55,874 | INFO     | [monitor] control thread has ended
[2026-01-14 19:32:56] 2026-01-14 19:32:56,067 [wrapper] ==== pilot stdout END ====
[2026-01-14 19:32:56] 2026-01-14 19:32:56,076 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 19:32:56] 2026-01-14 19:32:56,085 [wrapper] pilotpid: 463502
[2026-01-14 19:32:56] 2026-01-14 19:32:56,094 [wrapper] Pilot exit status: 0
[2026-01-14 19:32:56] 2026-01-14 19:32:56,127 [wrapper] pandaids: 6969468944
[2026-01-14 19:32:56] 2026-01-14 19:32:56,201 [wrapper] cleanup supervisor_pilot  478929 463503
[2026-01-14 19:32:56] 2026-01-14 19:32:56,210 [wrapper] Test setup, not cleaning
[2026-01-14 19:32:56] 2026-01-14 19:32:56,218 [wrapper] apfmon messages muted
[2026-01-14 19:32:56] 2026-01-14 19:32:56,226 [wrapper] ==== wrapper stdout END ====
[2026-01-14 19:32:56] 2026-01-14 19:32:56,234 [wrapper] ==== wrapper stderr END ====
[2026-01-14 19:32:56]  *** Error codes and diagnostics ***
[2026-01-14 19:32:56]     "exeErrorCode": 0,
[2026-01-14 19:32:56]     "exeErrorDiag": "",
[2026-01-14 19:32:56]     "pilotErrorCode": 0,
[2026-01-14 19:32:56]     "pilotErrorDiag": "",
[2026-01-14 19:32:56]  *** Listing of results directory ***
[2026-01-14 19:32:56] total 738724
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc    579449 Jan 14 13:11 pilot3.tar.gz
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc      5112 Jan 14 13:11 queuedata.json
[2026-01-14 19:32:56] -rwx------ 1 boinc boinc     36322 Jan 14 13:14 runpilot2-wrapper.sh
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc       100 Jan 14 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 19:32:56] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 18:22 run_atlas
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc       105 Jan 14 18:22 job.xml
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc      6317 Jan 14 18:22 init_data.xml
[2026-01-14 19:32:56] -rw-r--r-- 2 boinc boinc 599321495 Jan 14 18:22 EVNT.32794306._000935.pool.root.1
[2026-01-14 19:32:56] -rw-r--r-- 2 boinc boinc     15847 Jan 14 18:22 start_atlas.sh
[2026-01-14 19:32:56] drwxrwx--x 2 boinc boinc      4096 Jan 14 18:22 shared
[2026-01-14 19:32:56] -rw-r--r-- 2 boinc boinc    592408 Jan 14 18:22 input.tar.gz
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc         0 Jan 14 18:22 boinc_lockfile
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc      2507 Jan 14 18:22 pandaJob.out
[2026-01-14 19:32:56] -rw------- 1 boinc boinc    998064 Jan 14 18:22 agis_schedconf.cvmfs.json
[2026-01-14 19:32:56] -rw------- 1 boinc boinc   1516246 Jan 14 18:22 agis_ddmendpoints.agis.ALL.json
[2026-01-14 19:32:56] drwx------ 5 boinc boinc      4096 Jan 14 18:22 pilot3
[2026-01-14 19:32:56] -rw------- 1 boinc boinc 151307744 Jan 14 19:31 HITS.48215263._023353.pool.root.1
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc       530 Jan 14 19:31 boinc_task_state.xml
[2026-01-14 19:32:56] -rw------- 1 boinc boinc      1013 Jan 14 19:31 memory_monitor_summary.json
[2026-01-14 19:32:56] -rw------- 1 boinc boinc        95 Jan 14 19:31 pilot_heartbeat.json
[2026-01-14 19:32:56] -rw------- 1 boinc boinc    326244 Jan 14 19:32 log.48215263._023353.job.log.tgz.1
[2026-01-14 19:32:56] -rw------- 1 boinc boinc      7763 Jan 14 19:32 heartbeat.json
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc      8192 Jan 14 19:32 boinc_mmap_file
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc        27 Jan 14 19:32 wrapper_checkpoint.txt
[2026-01-14 19:32:56] -rw------- 1 boinc boinc       746 Jan 14 19:32 pilotlog.txt
[2026-01-14 19:32:56] -rw------- 1 boinc boinc    624796 Jan 14 19:32 log.48215263._023353.job.log.1
[2026-01-14 19:32:56] -rw------- 1 boinc boinc       357 Jan 14 19:32 output.list
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc       620 Jan 14 19:32 runtime_log
[2026-01-14 19:32:56] -rw------- 1 boinc boinc    972800 Jan 14 19:32 result.tar.gz
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc      8903 Jan 14 19:32 runtime_log.err
[2026-01-14 19:32:56] -rw------- 1 boinc boinc       646 Jan 14 19:32 JGmNDmAtF08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzJrKDmj3mOIn.diag
[2026-01-14 19:32:56] -rw-r--r-- 1 boinc boinc     22520 Jan 14 19:32 stderr.txt
[2026-01-14 19:32:56] HITS file was successfully produced:
[2026-01-14 19:32:56] -rw------- 1 boinc boinc 151307744 Jan 14 19:31 shared/HITS.pool.root.1
[2026-01-14 19:32:56]  *** Contents of shared directory: ***
[2026-01-14 19:32:56] total 734596
[2026-01-14 19:32:56] -rw-r--r-- 2 boinc boinc 599321495 Jan 14 18:22 ATLAS.root_0
[2026-01-14 19:32:56] -rw-r--r-- 2 boinc boinc     15847 Jan 14 18:22 start_atlas.sh
[2026-01-14 19:32:56] -rw-r--r-- 2 boinc boinc    592408 Jan 14 18:22 input.tar.gz
[2026-01-14 19:32:56] -rw------- 1 boinc boinc 151307744 Jan 14 19:31 HITS.pool.root.1
[2026-01-14 19:32:56] -rw------- 1 boinc boinc    972800 Jan 14 19:32 result.tar.gz
19:32:58 (459785): run_atlas exited; CPU time 28536.770773
19:32:58 (459785): called boinc_finish(0)

</stderr_txt>
]]>

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