Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:55:17 (3565): wrapper (7.7.26015): starting
12:55:17 (3565): wrapper: running run_atlas (--nthreads 6)
[2026-01-14 12:55:17] Arguments: --nthreads 6
[2026-01-14 12:55:17] Threads: 6
[2026-01-14 12:55:17] Checking for CVMFS
[2026-01-14 12:55:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 12:55:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 12:55:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 12:55:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 12:55:18] 2.11.2.0 2916 358522 100560 155139 0 61 17660582 20275200 3 130560 1 150724747 99.944 22189820 17024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 12:55:18] CVMFS is ok
[2026-01-14 12:55:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 12:55:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 12:55:18] Further information can be found at the LHC@home message board.
[2026-01-14 12:55:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 12:55:18] Checking for apptainer binary...
[2026-01-14 12:55:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 12:55:18] Running /usr/bin/apptainer --version
[2026-01-14 12:55:18] apptainer version 1.3.2-1.el7
[2026-01-14 12:55:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 12:55:19] c-205-23.aglt2.org
[2026-01-14 12:55:19] apptainer works
[2026-01-14 12:55:19] Set ATHENA_PROC_NUMBER=6
[2026-01-14 12:55:19] Set ATHENA_CORE_NUMBER=6
[2026-01-14 12:55:19] Starting ATLAS job with PandaID=6962013637
[2026-01-14 12:55:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 16:10:53]  *** The last 200 lines of the pilot log: ***
[2026-01-14 16:10:53] 2026-01-14 21:10:18,902 | INFO     | PID=9264 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 16:10:53] 2026-01-14 21:10:19,903 | INFO     | time since job start (11690s) is within the limit (174528.0s)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,793 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 16:10:53] 2026-01-14 21:10:20,797 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2026-01-14 16:10:53] 2026-01-14 21:10:20,799 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962013637/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,800 | INFO     | extracted standard info from prmon json
[2026-01-14 16:10:53] 2026-01-14 21:10:20,800 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 16:10:53] 2026-01-14 21:10:20,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 16:10:53] 2026-01-14 21:10:20,801 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 16:10:53] 2026-01-14 21:10:20,801 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 16:10:53] 2026-01-14 21:10:20,804 | INFO     | fitting pss+swap vs Time
[2026-01-14 16:10:53] 2026-01-14 21:10:20,805 | INFO     | sum of square deviations: 2194675568.0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,806 | INFO     | sum of deviations: -3977806980.5
[2026-01-14 16:10:53] 2026-01-14 21:10:20,806 | INFO     | mean x: 1768419179.5
[2026-01-14 16:10:53] 2026-01-14 21:10:20,806 | INFO     | mean y: 2401585.078125
[2026-01-14 16:10:53] 2026-01-14 21:10:20,806 | INFO     | intersect: 3207627113.2757316
[2026-01-14 16:10:53] 2026-01-14 21:10:20,807 | INFO     | chi2: 1.9941890567744585
[2026-01-14 16:10:53] 2026-01-14 21:10:20,807 | INFO     | sum of square deviations: 2027639878.0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,808 | INFO     | sum of deviations: 8140634403.000009
[2026-01-14 16:10:53] 2026-01-14 21:10:20,808 | INFO     | mean x: 1768419027.0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,808 | INFO     | mean y: 2412414.524064171
[2026-01-14 16:10:53] 2026-01-14 21:10:20,808 | INFO     | intersect: -7097493701.110146
[2026-01-14 16:10:53] 2026-01-14 21:10:20,809 | INFO     | chi2: 1.2321018548664031
[2026-01-14 16:10:53] 2026-01-14 21:10:20,809 | INFO     | current chi2=1.2321018548664031 (change=38.2153938373681 %)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,809 | INFO     | sum of square deviations: 1869302025.5
[2026-01-14 16:10:53] 2026-01-14 21:10:20,810 | INFO     | sum of deviations: 7872746589.499998
[2026-01-14 16:10:53] 2026-01-14 21:10:20,810 | INFO     | mean x: 1768418874.5
[2026-01-14 16:10:53] 2026-01-14 21:10:20,811 | INFO     | mean y: 2412156.456043956
[2026-01-14 16:10:53] 2026-01-14 21:10:20,811 | INFO     | intersect: -7445455268.447305
[2026-01-14 16:10:53] 2026-01-14 21:10:20,811 | INFO     | chi2: 1.2326685419705705
[2026-01-14 16:10:53] 2026-01-14 21:10:20,811 | INFO     | current chi2=1.2326685419705705 (change=-0.045993527396227564 %)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,811 | INFO     | right removable region: 181
[2026-01-14 16:10:53] 2026-01-14 21:10:20,812 | INFO     | sum of square deviations: 2027639878.0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,813 | INFO     | sum of deviations: -24539503706.0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,813 | INFO     | mean x: 1768419332.0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,813 | INFO     | mean y: 2420068.3475935827
[2026-01-14 16:10:53] 2026-01-14 21:10:20,813 | INFO     | intersect: 21404708128.58274
[2026-01-14 16:10:53] 2026-01-14 21:10:20,813 | INFO     | chi2: 0.8791695759460655
[2026-01-14 16:10:53] 2026-01-14 21:10:20,813 | INFO     | current chi2=0.8791695759460655 (change=55.91342892192497 %)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,814 | INFO     | sum of square deviations: 1869302025.5
[2026-01-14 16:10:53] 2026-01-14 21:10:20,814 | INFO     | sum of deviations: -22167000694.0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,815 | INFO     | mean x: 1768419484.5
[2026-01-14 16:10:53] 2026-01-14 21:10:20,815 | INFO     | mean y: 2417745.0659340657
[2026-01-14 16:10:53] 2026-01-14 21:10:20,815 | INFO     | intersect: 20973109161.13567
[2026-01-14 16:10:53] 2026-01-14 21:10:20,815 | INFO     | chi2: 0.8696858038813302
[2026-01-14 16:10:53] 2026-01-14 21:10:20,815 | INFO     | current chi2=0.8696858038813302 (change=1.0787193192541817 %)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,815 | INFO     | left removable region: 20
[2026-01-14 16:10:53] 2026-01-14 21:10:20,816 | INFO     | sum of square deviations: 1294014960.0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,816 | INFO     | sum of deviations: 2287477063.9999995
[2026-01-14 16:10:53] 2026-01-14 21:10:20,817 | INFO     | mean x: 1768419454.0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,817 | INFO     | mean y: 2415309.3602484474
[2026-01-14 16:10:53] 2026-01-14 21:10:20,817 | INFO     | intersect: -3123683743.2785263
[2026-01-14 16:10:53] 2026-01-14 21:10:20,817 | INFO     | chi2: 0.0003540772689490795
[2026-01-14 16:10:53] 2026-01-14 21:10:20,817 | INFO     | current memory leak: 1.77 B/s (using 161 data points, chi2=0.00)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,817 | INFO     | could have reported an average CPU frequency of 2263 MHz (10 samples)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,818 | INFO     | ..............................
[2026-01-14 16:10:53] 2026-01-14 21:10:20,818 | INFO     | . Timing measurements:
[2026-01-14 16:10:53] 2026-01-14 21:10:20,818 | INFO     | . get job = 0 s
[2026-01-14 16:10:53] 2026-01-14 21:10:20,818 | INFO     | . initial setup = 2 s
[2026-01-14 16:10:53] 2026-01-14 21:10:20,818 | INFO     | . payload setup = 3 s
[2026-01-14 16:10:53] 2026-01-14 21:10:20,818 | INFO     | . stage-in = 0 s
[2026-01-14 16:10:53] 2026-01-14 21:10:20,818 | INFO     | . payload execution = 11659 s
[2026-01-14 16:10:53] 2026-01-14 21:10:20,818 | INFO     | . stage-out = 1 s
[2026-01-14 16:10:53] 2026-01-14 21:10:20,818 | INFO     | . log creation = 0 s
[2026-01-14 16:10:53] 2026-01-14 21:10:20,819 | INFO     | ..............................
[2026-01-14 16:10:53] 2026-01-14 21:10:20,898 | INFO     | 
[2026-01-14 16:10:53] 2026-01-14 21:10:20,898 | INFO     | job summary report
[2026-01-14 16:10:53] 2026-01-14 21:10:20,898 | INFO     | --------------------------------------------------
[2026-01-14 16:10:53] 2026-01-14 21:10:20,898 | INFO     | PanDA job id: 6962013637
[2026-01-14 16:10:53] 2026-01-14 21:10:20,899 | INFO     | task id: 47898826
[2026-01-14 16:10:53] 2026-01-14 21:10:20,899 | INFO     | errors: (none)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,899 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 16:10:53] 2026-01-14 21:10:20,899 | INFO     | pilot state: finished 
[2026-01-14 16:10:53] 2026-01-14 21:10:20,899 | INFO     | transexitcode: 0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,899 | INFO     | exeerrorcode: 0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,899 | INFO     | exeerrordiag: 
[2026-01-14 16:10:53] 2026-01-14 21:10:20,899 | INFO     | exitcode: 0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,899 | INFO     | exitmsg: OK
[2026-01-14 16:10:53] 2026-01-14 21:10:20,899 | INFO     | cpuconsumptiontime: 66392 s
[2026-01-14 16:10:53] 2026-01-14 21:10:20,900 | INFO     | nevents: 400
[2026-01-14 16:10:53] 2026-01-14 21:10:20,900 | INFO     | neventsw: 0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,900 | INFO     | pid: 16019
[2026-01-14 16:10:53] 2026-01-14 21:10:20,900 | INFO     | pgrp: 16019
[2026-01-14 16:10:53] 2026-01-14 21:10:20,900 | INFO     | corecount: 6
[2026-01-14 16:10:53] 2026-01-14 21:10:20,900 | INFO     | event service: False
[2026-01-14 16:10:53] 2026-01-14 21:10:20,900 | INFO     | sizes: {0: 2283964, 1: 2283992, 4: 2284254, 11: 2284282, 11667: 2313904, 11669: 2323086, 11675: 2323224}
[2026-01-14 16:10:53] 2026-01-14 21:10:20,900 | INFO     | --------------------------------------------------
[2026-01-14 16:10:53] 2026-01-14 21:10:20,900 | INFO     | 
[2026-01-14 16:10:53] 2026-01-14 21:10:20,901 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 16:10:53] 2026-01-14 21:10:20,923 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,923 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,924 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,924 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,926 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,926 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 16:10:53] 2026-01-14 21:10:20,927 | INFO     | job 6962013637 has completed (purged errors)
[2026-01-14 16:10:53] 2026-01-14 21:10:20,927 | INFO     | overall cleanup function is called
[2026-01-14 16:10:53] 2026-01-14 21:10:21,934 | INFO     | --- collectZombieJob: --- 10, [16019]
[2026-01-14 16:10:53] 2026-01-14 21:10:21,935 | INFO     | zombie collector waiting for pid 16019
[2026-01-14 16:10:53] 2026-01-14 21:10:21,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 16:10:53] 2026-01-14 21:10:21,935 | INFO     | collected zombie processes
[2026-01-14 16:10:53] 2026-01-14 21:10:21,935 | INFO     | will attempt to kill all subprocesses of pid=16019
[2026-01-14 16:10:53] 2026-01-14 21:10:22,026 | INFO     | process IDs to be killed: [16019] (in reverse order)
[2026-01-14 16:10:53] 2026-01-14 21:10:22,074 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 16:10:53] 2026-01-14 21:10:22,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 16:10:53] 2026-01-14 21:10:22,078 | INFO     | did not find any defunct processes belonging to 16019
[2026-01-14 16:10:53] 2026-01-14 21:10:22,081 | INFO     | did not find any defunct processes belonging to 16019
[2026-01-14 16:10:53] 2026-01-14 21:10:22,081 | INFO     | ready for new job
[2026-01-14 16:10:53] 2026-01-14 21:10:22,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 16:10:53] 2026-01-14 21:10:22,083 | INFO     | ***************************************
[2026-01-14 16:10:53] 2026-01-14 21:10:22,083 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 16:10:53] 2026-01-14 21:10:22,083 | INFO     | ***************************************
[2026-01-14 16:10:53] 2026-01-14 21:10:22,083 | INFO     | 
[2026-01-14 16:10:53] 2026-01-14 21:10:22,083 | INFO     | architecture information:
[2026-01-14 16:10:53] 2026-01-14 21:10:22,084 | INFO     | executing command: cat /etc/os-release
[2026-01-14 16:10:53] 2026-01-14 21:10:22,099 | INFO     | cat /etc/os-release:
[2026-01-14 16:10:53] NAME="CentOS Linux"
[2026-01-14 16:10:53] VERSION="7 (Core)"
[2026-01-14 16:10:53] ID="centos"
[2026-01-14 16:10:53] ID_LIKE="rhel fedora"
[2026-01-14 16:10:53] VERSION_ID="7"
[2026-01-14 16:10:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 16:10:53] ANSI_COLOR="0;31"
[2026-01-14 16:10:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 16:10:53] HOME_URL="https://www.centos.org/"
[2026-01-14 16:10:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 16:10:53] 
[2026-01-14 16:10:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 16:10:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 16:10:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 16:10:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 16:10:53] 
[2026-01-14 16:10:53] 2026-01-14 21:10:22,100 | INFO     | ***************************************
[2026-01-14 16:10:53] 2026-01-14 21:10:22,603 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 16:10:53] 2026-01-14 21:10:22,619 | INFO     | sufficient remaining disk space (29307699200 B)
[2026-01-14 16:10:53] 2026-01-14 21:10:22,619 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 16:10:53] 2026-01-14 21:10:22,620 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 16:10:53] 2026-01-14 21:10:22,620 | INFO     | update_server=False
[2026-01-14 16:10:53] 2026-01-14 21:10:22,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 16:10:53] 2026-01-14 21:10:22,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 16:10:53] 2026-01-14 21:10:22,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 16:10:53] 2026-01-14 21:10:22,621 | INFO     | aborting loop
[2026-01-14 16:10:53] 2026-01-14 21:10:23,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 16:10:53] 2026-01-14 21:10:23,382 | INFO     | all payload control threads have been joined
[2026-01-14 16:10:53] 2026-01-14 21:10:23,578 | INFO     | all data control threads have been joined
[2026-01-14 16:10:53] 2026-01-14 21:10:23,623 | INFO     | [job] retrieve thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:23,626 | INFO     | [job] queue monitor thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:23,627 | INFO     | [job] job monitor thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:23,723 | INFO     | all job control threads have been joined
[2026-01-14 16:10:53] 2026-01-14 21:10:23,861 | INFO     | [payload] validate_post thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:23,884 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:24,388 | INFO     | [payload] control thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:24,584 | INFO     | [data] control thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:24,680 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:24,728 | INFO     | [job] control thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:24,858 | INFO     | [job] validate thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:24,925 | INFO     | [data] copytool_in thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:24,957 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:24,992 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:25,083 | INFO     | [payload] failed_post thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:25,304 | INFO     | [data] copytool_out thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:25,886 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 16:10:53] 2026-01-14 21:10:27,024 [wrapper] supervise_pilot (15 min periods counter: 14)
[2026-01-14 16:10:53] 2026-01-14 21:10:29,892 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 16:10:53] 2026-01-14 21:10:43,222 | INFO     | [monitor] cgroup control has ended
[2026-01-14 16:10:53] 2026-01-14 21:10:44,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872451532608)>', '<ExcThread(monitor, started 139872018872064)>']
[2026-01-14 16:10:53] 2026-01-14 21:10:49,105 | INFO     | all workflow threads have been joined
[2026-01-14 16:10:53] 2026-01-14 21:10:49,105 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 16:10:53] 2026-01-14 21:10:49,105 | INFO     | traces error code: 0
[2026-01-14 16:10:53] 2026-01-14 21:10:49,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 16:10:53] 2026-01-14 21:10:53,083 | INFO     | PID=9264 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 16:10:53] 2026-01-14 21:10:53,084 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 16:10:53] 2026-01-14 21:10:53,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 16:10:53] 2026-01-14 21:10:53,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 16:10:53] 2026-01-14 21:10:53,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 16:10:53] 2026-01-14 21:10:53,084 | INFO     | [monitor] control thread has ended
[2026-01-14 16:10:53] 2026-01-14 21:10:53,164 [wrapper] ==== pilot stdout END ====
[2026-01-14 16:10:53] 2026-01-14 21:10:53,168 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 16:10:53] 2026-01-14 21:10:53,172 [wrapper] pilotpid: 9264
[2026-01-14 16:10:53] 2026-01-14 21:10:53,176 [wrapper] Pilot exit status: 0
[2026-01-14 16:10:53] 2026-01-14 21:10:53,191 [wrapper] pandaids: 6962013637
[2026-01-14 16:10:53] 2026-01-14 21:10:53,230 [wrapper] cleanup supervisor_pilot 29630 9265
[2026-01-14 16:10:53] 2026-01-14 21:10:53,234 [wrapper] Test setup, not cleaning
[2026-01-14 16:10:53] 2026-01-14 21:10:53,238 [wrapper] apfmon messages muted
[2026-01-14 16:10:53] 2026-01-14 21:10:53,242 [wrapper] ==== wrapper stdout END ====
[2026-01-14 16:10:53] 2026-01-14 21:10:53,246 [wrapper] ==== wrapper stderr END ====
[2026-01-14 16:10:53]  *** Error codes and diagnostics ***
[2026-01-14 16:10:53]     "exeErrorCode": 0,
[2026-01-14 16:10:53]     "exeErrorDiag": "",
[2026-01-14 16:10:53]     "pilotErrorCode": 0,
[2026-01-14 16:10:53]     "pilotErrorDiag": "",
[2026-01-14 16:10:53]  *** Listing of results directory ***
[2026-01-14 16:10:53] total 440888
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-14 16:10:53] -rwx------ 1 boincer umatlas     36322 Jan  7 10:31 runpilot2-wrapper.sh
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 10:31 queuedata.json
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas       100 Jan 14 12:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 16:10:53] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 12:55 run_atlas
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas       105 Jan 14 12:55 job.xml
[2026-01-14 16:10:53] -rw-r--r-- 2 boincer umatlas 225200931 Jan 14 12:55 EVNT.47898824._000355.pool.root.1
[2026-01-14 16:10:53] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 12:55 start_atlas.sh
[2026-01-14 16:10:53] drwxrwx--x 2 boincer umatlas      4096 Jan 14 12:55 shared
[2026-01-14 16:10:53] -rw-r--r-- 2 boincer umatlas    592395 Jan 14 12:55 input.tar.gz
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas         0 Jan 14 12:55 boinc_lockfile
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas      2516 Jan 14 12:55 pandaJob.out
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas        57 Jan 14 12:55 setup.sh.local
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas    997956 Jan 14 12:55 agis_schedconf.cvmfs.json
[2026-01-14 16:10:53] drwx------ 5 boincer umatlas      4096 Jan 14 12:55 pilot3
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas      5953 Jan 14 16:00 init_data.xml
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas 218292014 Jan 14 16:09 HITS.47898826._008437.pool.root.1
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas       530 Jan 14 16:09 boinc_task_state.xml
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas        95 Jan 14 16:10 pilot_heartbeat.json
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas      1051 Jan 14 16:10 memory_monitor_summary.json
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas   1516246 Jan 14 16:10 agis_ddmendpoints.agis.ALL.json
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas    392900 Jan 14 16:10 log.47898826._008437.job.log.tgz.1
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas      7845 Jan 14 16:10 heartbeat.json
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 16:10 boinc_mmap_file
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas        28 Jan 14 16:10 wrapper_checkpoint.txt
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas       744 Jan 14 16:10 pilotlog.txt
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas   1638631 Jan 14 16:10 log.47898826._008437.job.log.1
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas       357 Jan 14 16:10 output.list
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas       620 Jan 14 16:10 runtime_log
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas   2048000 Jan 14 16:10 result.tar.gz
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas      9343 Jan 14 16:10 runtime_log.err
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas       662 Jan 14 16:10 r2kNDmAgkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmF7cKDmBULzLm.diag
[2026-01-14 16:10:53] -rw-r--r-- 1 boincer umatlas     21156 Jan 14 16:10 stderr.txt
[2026-01-14 16:10:53] HITS file was successfully produced:
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas 218292014 Jan 14 16:09 shared/HITS.pool.root.1
[2026-01-14 16:10:53]  *** Contents of shared directory: ***
[2026-01-14 16:10:53] total 435700
[2026-01-14 16:10:53] -rw-r--r-- 2 boincer umatlas 225200931 Jan 14 12:55 ATLAS.root_0
[2026-01-14 16:10:53] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 12:55 start_atlas.sh
[2026-01-14 16:10:53] -rw-r--r-- 2 boincer umatlas    592395 Jan 14 12:55 input.tar.gz
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas 218292014 Jan 14 16:09 HITS.pool.root.1
[2026-01-14 16:10:53] -rw------- 1 boincer umatlas   2048000 Jan 14 16:10 result.tar.gz
16:10:54 (3565): run_atlas exited; CPU time 66327.839230
16:10:54 (3565): called boinc_finish(0)

</stderr_txt>
]]>

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