Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:00:52 (549186): wrapper (7.7.26015): starting
07:00:52 (549186): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 07:00:52] Arguments: --nthreads 3
[2026-01-15 07:00:52] Threads: 3
[2026-01-15 07:00:52] Checking for CVMFS
[2026-01-15 07:00:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 07:00:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 07:00:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 07:00:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 07:00:53] 2.13.3.0 110733 1396 86128 155145 2 57 14998720 15728640 0 130560 0 1387473 99.992 54945 16 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-15 07:00:53] CVMFS is ok
[2026-01-15 07:00:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 07:00:53] Checking for apptainer binary...
[2026-01-15 07:00:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 07:00:53] Running /usr/bin/apptainer --version
[2026-01-15 07:00:53] apptainer version 1.4.5-2.el9
[2026-01-15 07:00:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 07:00:53] testio003
[2026-01-15 07:00:53] apptainer works
[2026-01-15 07:00:53] Set ATHENA_PROC_NUMBER=3
[2026-01-15 07:00:53] Set ATHENA_CORE_NUMBER=3
[2026-01-15 07:00:53] Starting ATLAS job with PandaID=6969521344
[2026-01-15 07:00:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 08:22:13]  *** The last 200 lines of the pilot log: ***
[2026-01-15 08:22:13] 2026-01-14 23:20:58,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:20:58,840 | INFO     | time since job start (4797s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:00,845 | INFO     | time since job start (4799s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:01,286 | INFO     | monitor loop #373: job 0:6969521344 is in state 'finished'
[2026-01-15 08:22:13] 2026-01-14 23:21:01,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:21:02,850 | INFO     | time since job start (4801s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:03,786 | INFO     | monitor loop #374: job 0:6969521344 is in state 'finished'
[2026-01-15 08:22:13] 2026-01-14 23:21:03,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:21:04,856 | INFO     | time since job start (4803s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:06,289 | INFO     | monitor loop #375: job 0:6969521344 is in state 'finished'
[2026-01-15 08:22:13] 2026-01-14 23:21:06,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:21:06,861 | INFO     | time since job start (4805s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:08,792 | INFO     | monitor loop #376: job 0:6969521344 is in state 'finished'
[2026-01-15 08:22:13] 2026-01-14 23:21:08,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:21:08,866 | INFO     | time since job start (4807s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:10,871 | INFO     | time since job start (4809s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:11,295 | INFO     | monitor loop #377: job 0:6969521344 is in state 'finished'
[2026-01-15 08:22:13] 2026-01-14 23:21:11,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:21:12,874 | INFO     | time since job start (4811s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:13,798 | INFO     | monitor loop #378: job 0:6969521344 is in state 'finished'
[2026-01-15 08:22:13] 2026-01-14 23:21:13,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:21:14,879 | INFO     | time since job start (4813s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:16,299 | INFO     | monitor loop #379: job 0:6969521344 is in state 'finished'
[2026-01-15 08:22:13] 2026-01-14 23:21:16,299 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:21:16,884 | INFO     | time since job start (4815s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:18,801 | INFO     | monitor loop #380: job 0:6969521344 is in state 'finished'
[2026-01-15 08:22:13] 2026-01-14 23:21:18,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:21:18,889 | INFO     | time since job start (4817s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:19,934 | INFO     | PID=552858 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 08:22:13] 2026-01-14 23:21:20,935 | INFO     | time since job start (4819s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:21,304 | INFO     | monitor loop #381: job 0:6969521344 is in state 'finished'
[2026-01-15 08:22:13] 2026-01-14 23:21:21,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:21:22,940 | INFO     | time since job start (4821s) is within the limit (349056.0s)
[2026-01-15 08:22:13] 2026-01-14 23:21:23,807 | INFO     | monitor loop #382: job 0:6969521344 is in state 'finished'
[2026-01-15 08:22:13] 2026-01-14 23:21:23,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:22:13] 2026-01-14 23:21:24,283 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 08:22:13] 2026-01-14 23:21:24,284 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3712.4295
[2026-01-15 08:22:13] 2026-01-14 23:21:24,285 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6969521344/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 08:22:13] 2026-01-14 23:21:24,285 | INFO     | extracted standard info from prmon json
[2026-01-15 08:22:13] 2026-01-14 23:21:24,285 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 08:22:13] 2026-01-14 23:21:24,285 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 08:22:13] 2026-01-14 23:21:24,285 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 08:22:13] 2026-01-14 23:21:24,285 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 08:22:13] 2026-01-14 23:21:24,286 | INFO     | fitting pss+swap vs Time
[2026-01-15 08:22:13] 2026-01-14 23:21:24,286 | INFO     | sum of square deviations: 110960220.0
[2026-01-15 08:22:13] 2026-01-14 23:21:24,286 | INFO     | sum of deviations: -2491079021.0
[2026-01-15 08:22:13] 2026-01-14 23:21:24,286 | INFO     | mean x: 1768430524.0
[2026-01-15 08:22:13] 2026-01-14 23:21:24,286 | INFO     | mean y: 2394267.23943662
[2026-01-15 08:22:13] 2026-01-14 23:21:24,286 | INFO     | intersect: 39704011463.31598
[2026-01-15 08:22:13] 2026-01-14 23:21:24,286 | INFO     | chi2: 0.06916643037962224
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | current memory leak: -22.45 B/s (using 71 data points, chi2=0.07)
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | could have reported an average CPU frequency of 3634 MHz (6 samples)
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | ..............................
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | . Timing measurements:
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | . get job = 0 s
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | . initial setup = 4 s
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | . payload setup = 4 s
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | . stage-in = 0 s
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | . payload execution = 4717 s
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | . stage-out = 0 s
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | . log creation = 0 s
[2026-01-15 08:22:13] 2026-01-14 23:21:24,287 | INFO     | ..............................
[2026-01-15 08:22:13] 2026-01-14 23:21:24,486 | INFO     | 
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | job summary report
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | --------------------------------------------------
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | PanDA job id: 6969521344
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | task id: 48215263
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | errors: (none)
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | pilot state: finished 
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | transexitcode: 0
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | exeerrorcode: 0
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | exeerrordiag: 
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | exitcode: 0
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | exitmsg: OK
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | cpuconsumptiontime: 12978 s
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | nevents: 400
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | neventsw: 0
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | pid: 559402
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | pgrp: 559402
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | corecount: 3
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | event service: False
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | sizes: {0: 2283951, 3: 2284213, 10: 2284241, 4725: 2310465, 4726: 2319546, 4728: 2319546, 4808: 2319868}
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | --------------------------------------------------
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | 
[2026-01-15 08:22:13] 2026-01-14 23:21:24,487 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | job 6969521344 has completed (purged errors)
[2026-01-15 08:22:13] 2026-01-14 23:21:24,500 | INFO     | overall cleanup function is called
[2026-01-15 08:22:13] 2026-01-14 23:21:25,506 | INFO     | --- collectZombieJob: --- 10, [559402]
[2026-01-15 08:22:13] 2026-01-14 23:21:25,506 | INFO     | zombie collector waiting for pid 559402
[2026-01-15 08:22:13] 2026-01-14 23:21:25,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 08:22:13] 2026-01-14 23:21:25,506 | INFO     | collected zombie processes
[2026-01-15 08:22:13] 2026-01-14 23:21:25,506 | INFO     | will attempt to kill all subprocesses of pid=559402
[2026-01-15 08:22:13] 2026-01-14 23:21:25,539 | INFO     | process IDs to be killed: [559402] (in reverse order)
[2026-01-15 08:22:13] 2026-01-14 23:21:25,559 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 08:22:13] 2026-01-14 23:21:25,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 08:22:13] 2026-01-14 23:21:25,560 | INFO     | did not find any defunct processes belonging to 559402
[2026-01-15 08:22:13] 2026-01-14 23:21:25,561 | INFO     | did not find any defunct processes belonging to 559402
[2026-01-15 08:22:13] 2026-01-14 23:21:25,561 | INFO     | ready for new job
[2026-01-15 08:22:13] 2026-01-14 23:21:25,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 08:22:13] 2026-01-14 23:21:25,562 | INFO     | ***************************************
[2026-01-15 08:22:13] 2026-01-14 23:21:25,562 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 08:22:13] 2026-01-14 23:21:25,563 | INFO     | ***************************************
[2026-01-15 08:22:13] 2026-01-14 23:21:25,563 | INFO     | 
[2026-01-15 08:22:13] 2026-01-14 23:21:25,563 | INFO     | architecture information:
[2026-01-15 08:22:13] 2026-01-14 23:21:25,563 | INFO     | executing command: cat /etc/os-release
[2026-01-15 08:22:13] 2026-01-14 23:21:25,570 | INFO     | cat /etc/os-release:
[2026-01-15 08:22:13] NAME="CentOS Linux"
[2026-01-15 08:22:13] VERSION="7 (Core)"
[2026-01-15 08:22:13] ID="centos"
[2026-01-15 08:22:13] ID_LIKE="rhel fedora"
[2026-01-15 08:22:13] VERSION_ID="7"
[2026-01-15 08:22:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 08:22:13] ANSI_COLOR="0;31"
[2026-01-15 08:22:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 08:22:13] HOME_URL="https://www.centos.org/"
[2026-01-15 08:22:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 08:22:13] 
[2026-01-15 08:22:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 08:22:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 08:22:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 08:22:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 08:22:13] 
[2026-01-15 08:22:13] 2026-01-14 23:21:25,570 | INFO     | ***************************************
[2026-01-15 08:22:13] 2026-01-14 23:21:26,073 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-15 08:22:13] 2026-01-14 23:21:26,081 | INFO     | sufficient remaining disk space (46824161280 B)
[2026-01-15 08:22:13] 2026-01-14 23:21:26,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 08:22:13] 2026-01-14 23:21:26,082 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 08:22:13] 2026-01-14 23:21:26,082 | INFO     | update_server=False
[2026-01-15 08:22:13] 2026-01-14 23:21:26,082 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 08:22:13] 2026-01-14 23:21:26,082 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:22:13] 2026-01-14 23:21:26,133 | INFO     | all data control threads have been joined
[2026-01-15 08:22:13] 2026-01-14 23:21:26,309 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 08:22:13] 2026-01-14 23:21:26,309 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 08:22:13] 2026-01-14 23:21:26,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:22:13] 2026-01-14 23:21:26,309 | INFO     | will abort loop
[2026-01-15 08:22:13] 2026-01-14 23:21:26,447 | INFO     | all payload control threads have been joined
[2026-01-15 08:22:13] 2026-01-14 23:21:26,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 08:22:13] 2026-01-14 23:21:27,087 | INFO     | [job] retrieve thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:27,087 | INFO     | [job] queue monitor thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:27,138 | INFO     | [data] control thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:27,170 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:27,257 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:27,314 | INFO     | [job] job monitor thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:27,383 | INFO     | [payload] validate_post thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:27,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 08:22:13] 2026-01-14 23:21:27,452 | INFO     | [payload] control thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:27,614 | INFO     | all job control threads have been joined
[2026-01-15 08:22:13] 2026-01-14 23:21:27,826 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:28,005 | INFO     | [data] copytool_in thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:28,442 | INFO     | [payload] failed_post thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:28,567 | INFO     | [job] validate thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:28,619 | INFO     | [job] control thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:29,392 | INFO     | [data] copytool_out thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:30,651 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:36,262 | INFO     | job.realtimelogging is not enabled
[2026-01-15 08:22:13] 2026-01-14 23:21:37,268 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 08:22:13] 2026-01-14 23:21:54,997 | INFO     | 4827s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-15 08:22:13] 2026-01-14 23:21:56,043 | INFO     | PID=552858 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 08:22:13] 2026-01-14 23:21:56,043 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 08:22:13] 2026-01-14 23:21:56,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 08:22:13] 2026-01-14 23:21:56,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 08:22:13] 2026-01-14 23:22:08,719 | INFO     | [monitor] cgroup control has ended
[2026-01-15 08:22:13] 2026-01-14 23:22:08,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656120145728)>', '<ExcThread(monitor, started 139655752181504)>']
[2026-01-15 08:22:13] 2026-01-14 23:22:09,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 08:22:13] 2026-01-14 23:22:09,106 | INFO     | [monitor] control thread has ended
[2026-01-15 08:22:13] 2026-01-14 23:22:13,862 | INFO     | all workflow threads have been joined
[2026-01-15 08:22:13] 2026-01-14 23:22:13,863 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 08:22:13] 2026-01-14 23:22:13,863 | INFO     | traces error code: 0
[2026-01-15 08:22:13] 2026-01-14 23:22:13,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 08:22:13] 2026-01-14 23:22:13,922 [wrapper] ==== pilot stdout END ====
[2026-01-15 08:22:13] 2026-01-14 23:22:13,924 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 08:22:13] 2026-01-14 23:22:13,925 [wrapper] pilotpid: 552858
[2026-01-15 08:22:13] 2026-01-14 23:22:13,927 [wrapper] Pilot exit status: 0
[2026-01-15 08:22:13] 2026-01-14 23:22:13,933 [wrapper] pandaids: 6969521344
[2026-01-15 08:22:13] 2026-01-14 23:22:13,944 [wrapper] cleanup supervisor_pilot  570988 552859
[2026-01-15 08:22:13] 2026-01-14 23:22:13,946 [wrapper] Test setup, not cleaning
[2026-01-15 08:22:13] 2026-01-14 23:22:13,948 [wrapper] apfmon messages muted
[2026-01-15 08:22:13] 2026-01-14 23:22:13,949 [wrapper] ==== wrapper stdout END ====
[2026-01-15 08:22:13] 2026-01-14 23:22:13,951 [wrapper] ==== wrapper stderr END ====
[2026-01-15 08:22:13]  *** Error codes and diagnostics ***
[2026-01-15 08:22:13]     "exeErrorCode": 0,
[2026-01-15 08:22:13]     "exeErrorDiag": "",
[2026-01-15 08:22:13]     "pilotErrorCode": 0,
[2026-01-15 08:22:13]     "pilotErrorDiag": "",
[2026-01-15 08:22:13]  *** Listing of results directory ***
[2026-01-15 08:22:13] total 744984
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc    579449 Jan 15 00:23 pilot3.tar.gz
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc      5112 Jan 15 00:32 queuedata.json
[2026-01-15 08:22:13] -rwx------. 1 boinc boinc     36322 Jan 15 00:32 runpilot2-wrapper.sh
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc       100 Jan 15 07:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 08:22:13] -rwxr-xr-x. 1 boinc boinc      7986 Jan 15 07:00 run_atlas
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc       105 Jan 15 07:00 job.xml
[2026-01-15 08:22:13] -rw-r--r--. 2 boinc boinc     15847 Jan 15 07:00 start_atlas.sh
[2026-01-15 08:22:13] drwxrwx--x. 2 boinc boinc        68 Jan 15 07:00 shared
[2026-01-15 08:22:13] -rw-r--r--. 2 boinc boinc    592405 Jan 15 07:00 input.tar.gz
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc      9407 Jan 15 07:00 init_data.xml
[2026-01-15 08:22:13] -rw-r--r--. 2 boinc boinc 599457622 Jan 15 07:00 EVNT.32794306._001084.pool.root.1
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc         0 Jan 15 07:00 boinc_lockfile
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc      2508 Jan 15 07:00 pandaJob.out
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc    999596 Jan 15 07:00 agis_schedconf.cvmfs.json
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc   1516246 Jan 15 07:01 agis_ddmendpoints.agis.ALL.json
[2026-01-15 08:22:13] drwx------. 5 boinc boinc      4096 Jan 15 07:01 pilot3
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc 157584466 Jan 15 08:19 HITS.48215263._027084.pool.root.1
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc       530 Jan 15 08:19 boinc_task_state.xml
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc      1025 Jan 15 08:19 memory_monitor_summary.json
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc    254021 Jan 15 08:20 log.48215263._027084.job.log.tgz.1
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc        95 Jan 15 08:21 pilot_heartbeat.json
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc      7758 Jan 15 08:21 heartbeat.json
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc      8192 Jan 15 08:21 boinc_mmap_file
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc        27 Jan 15 08:21 wrapper_checkpoint.txt
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc      5120 Jan 15 08:22 pilotlog.txt
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc    698085 Jan 15 08:22 log.48215263._027084.job.log.1
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc       357 Jan 15 08:22 output.list
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc       620 Jan 15 08:22 runtime_log
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc    972800 Jan 15 08:22 result.tar.gz
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc      8775 Jan 15 08:22 runtime_log.err
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc       643 Jan 15 08:22 pVVNDmD2H08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpjrKDmTHTARm.diag
[2026-01-15 08:22:13] -rw-r--r--. 1 boinc boinc     22036 Jan 15 08:22 stderr.txt
[2026-01-15 08:22:13] HITS file was successfully produced:
[2026-01-15 08:22:13] -rw-------. 1 boinc boinc 157584466 Jan 15 08:19 shared/HITS.pool.root.1
[2026-01-15 08:22:14]  *** Contents of shared directory: ***
[2026-01-15 08:22:14] total 740848
[2026-01-15 08:22:14] -rw-r--r--. 2 boinc boinc     15847 Jan 15 07:00 start_atlas.sh
[2026-01-15 08:22:14] -rw-r--r--. 2 boinc boinc    592405 Jan 15 07:00 input.tar.gz
[2026-01-15 08:22:14] -rw-r--r--. 2 boinc boinc 599457622 Jan 15 07:00 ATLAS.root_0
[2026-01-15 08:22:14] -rw-------. 1 boinc boinc 157584466 Jan 15 08:19 HITS.pool.root.1
[2026-01-15 08:22:14] -rw-------. 1 boinc boinc    972800 Jan 15 08:22 result.tar.gz
08:22:15 (549186): run_atlas exited; CPU time 12984.858817
08:22:15 (549186): called boinc_finish(0)

</stderr_txt>
]]>

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