Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:11:25 (310746): wrapper (7.7.26015): starting
23:11:25 (310746): wrapper: running run_atlas (--nthreads 2)
[2026-01-14 23:11:25] Arguments: --nthreads 2
[2026-01-14 23:11:25] Threads: 2
[2026-01-14 23:11:25] Checking for CVMFS
[2026-01-14 23:11:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 23:11:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 23:11:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 23:11:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 23:11:25] 2.9.2.0 4141607 1258 55604 155145 0 57 19943334 36864000 0 130560 0 988451 99.989 50915 2376 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 23:11:25] CVMFS is ok
[2026-01-14 23:11:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 23:11:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 23:11:25] Further information can be found at the LHC@home message board.
[2026-01-14 23:11:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 23:11:25] Checking for apptainer binary...
[2026-01-14 23:11:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 23:11:25] Running /usr/bin/apptainer --version
[2026-01-14 23:11:25] apptainer version 1.4.1-1.1
[2026-01-14 23:11:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 23:11:25] thA337
[2026-01-14 23:11:25] apptainer works
[2026-01-14 23:11:25] Set ATHENA_PROC_NUMBER=2
[2026-01-14 23:11:25] Set ATHENA_CORE_NUMBER=2
[2026-01-14 23:11:25] Starting ATLAS job with PandaID=6969521403
[2026-01-14 23:11:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 00:36:12]  *** The last 200 lines of the pilot log: ***
[2026-01-15 00:36:12] 2026-01-14 23:35:41,900 | INFO     | will attempt to kill all subprocesses of pid=320878
[2026-01-15 00:36:12] 2026-01-14 23:35:41,932 | INFO     | process IDs to be killed: [320878] (in reverse order)
[2026-01-15 00:36:12] 2026-01-14 23:35:41,952 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 00:36:12] 2026-01-14 23:35:41,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 00:36:12] 2026-01-14 23:35:41,953 | INFO     | did not find any defunct processes belonging to 320878
[2026-01-15 00:36:12] 2026-01-14 23:35:41,953 | INFO     | did not find any defunct processes belonging to 320878
[2026-01-15 00:36:12] 2026-01-14 23:35:41,953 | INFO     | ready for new job
[2026-01-15 00:36:12] 2026-01-14 23:35:41,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 00:36:12] 2026-01-14 23:35:41,954 | INFO     | ***************************************
[2026-01-15 00:36:12] 2026-01-14 23:35:41,954 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 00:36:12] 2026-01-14 23:35:41,954 | INFO     | ***************************************
[2026-01-15 00:36:12] 2026-01-14 23:35:41,954 | INFO     | 
[2026-01-15 00:36:12] 2026-01-14 23:35:41,954 | INFO     | architecture information:
[2026-01-15 00:36:12] 2026-01-14 23:35:41,954 | INFO     | executing command: cat /etc/os-release
[2026-01-15 00:36:12] 2026-01-14 23:35:41,962 | INFO     | cat /etc/os-release:
[2026-01-15 00:36:12] NAME="CentOS Linux"
[2026-01-15 00:36:12] VERSION="7 (Core)"
[2026-01-15 00:36:12] ID="centos"
[2026-01-15 00:36:12] ID_LIKE="rhel fedora"
[2026-01-15 00:36:12] VERSION_ID="7"
[2026-01-15 00:36:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 00:36:12] ANSI_COLOR="0;31"
[2026-01-15 00:36:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 00:36:12] HOME_URL="https://www.centos.org/"
[2026-01-15 00:36:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 00:36:12] 
[2026-01-15 00:36:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 00:36:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 00:36:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 00:36:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 00:36:12] 
[2026-01-15 00:36:12] 2026-01-14 23:35:41,962 | INFO     | ***************************************
[2026-01-15 00:36:12] 2026-01-14 23:35:42,466 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 00:36:12] 2026-01-14 23:35:42,478 | INFO     | sufficient remaining disk space (488741273600 B)
[2026-01-15 00:36:12] 2026-01-14 23:35:42,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 00:36:12] 2026-01-14 23:35:42,478 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 00:36:12] 2026-01-14 23:35:42,478 | INFO     | update_server=False
[2026-01-15 00:36:12] 2026-01-14 23:35:42,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 00:36:12] 2026-01-14 23:35:42,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 00:36:12] 2026-01-14 23:35:42,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 00:36:12] 2026-01-14 23:35:42,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 00:36:12] 2026-01-14 23:35:42,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 00:36:12] 2026-01-14 23:35:42,547 | INFO     | aborting loop
[2026-01-15 00:36:12] 2026-01-14 23:35:42,813 | INFO     | all job control threads have been joined
[2026-01-15 00:36:12] 2026-01-14 23:35:42,974 | INFO     | all data control threads have been joined
[2026-01-15 00:36:12] 2026-01-14 23:35:43,131 | INFO     | all payload control threads have been joined
[2026-01-15 00:36:12] 2026-01-14 23:35:43,484 | INFO     | [job] retrieve thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:43,484 | INFO     | [job] queue monitor thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:43,552 | INFO     | [job] job monitor thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:43,576 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:43,695 | INFO     | [payload] failed_post thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:43,819 | INFO     | [job] control thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:43,980 | INFO     | [data] control thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:44,138 | INFO     | [payload] control thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:44,207 | INFO     | [payload] validate_post thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:44,381 | INFO     | [data] copytool_in thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:44,485 | INFO     | [data] copytool_out thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:44,611 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:44,823 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:44,835 | INFO     | [job] validate thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:44,913 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:46,151 | INFO     | [monitor] cgroup control has ended
[2026-01-15 00:36:12] 2026-01-14 23:35:46,485 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 00:36:12] 2026-01-14 23:35:48,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087077263168)>', '<ExcThread(monitor, started 140086423299840)>']
[2026-01-15 00:36:12] 2026-01-14 23:35:53,314 | INFO     | all workflow threads have been joined
[2026-01-15 00:36:12] 2026-01-14 23:35:53,315 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 00:36:12] 2026-01-14 23:35:53,315 | INFO     | traces error code: 0
[2026-01-15 00:36:12] 2026-01-14 23:35:53,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 00:36:12] 2026-01-14 23:36:12,700 | INFO     | PID=314455 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 00:36:12] 2026-01-14 23:36:12,701 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 00:36:12] 2026-01-14 23:36:12,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 00:36:12] 2026-01-14 23:36:12,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 00:36:12] 2026-01-14 23:36:12,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 00:36:12] 2026-01-14 23:36:12,701 | INFO     | [monitor] control thread has ended
[2026-01-15 00:36:12] 2026-01-14 23:36:12,739 [wrapper] ==== pilot stdout END ====
[2026-01-15 00:36:12] 2026-01-14 23:36:12,742 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 00:36:12] 2026-01-14 23:36:12,745 [wrapper] pilotpid: 314455
[2026-01-15 00:36:12] 2026-01-14 23:36:12,747 [wrapper] Pilot exit status: 0
[2026-01-15 00:36:12] 2026-01-14 23:36:12,753 [wrapper] pandaids: 6969521403
[2026-01-15 00:36:12] 2026-01-14 23:36:12,764 [wrapper] cleanup supervisor_pilot  332546 314456
[2026-01-15 00:36:12] 2026-01-14 23:36:12,766 [wrapper] Test setup, not cleaning
[2026-01-15 00:36:12] 2026-01-14 23:36:12,768 [wrapper] apfmon messages muted
[2026-01-15 00:36:12] 2026-01-14 23:36:12,770 [wrapper] ==== wrapper stdout END ====
[2026-01-15 00:36:12] 2026-01-14 23:36:12,772 [wrapper] ==== wrapper stderr END ====
[2026-01-15 00:36:12]  *** Error codes and diagnostics ***
[2026-01-15 00:36:12]     "exeErrorCode": 0,
[2026-01-15 00:36:12]     "exeErrorDiag": "",
[2026-01-15 00:36:12]     "pilotErrorCode": 0,
[2026-01-15 00:36:12]     "pilotErrorDiag": "",
[2026-01-15 00:36:12]  *** Listing of results directory ***
[2026-01-15 00:36:12] total 738848
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc    579449 Jan 14 16:23 pilot3.tar.gz
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc      5112 Jan 14 16:25 queuedata.json
[2026-01-15 00:36:12] -rwx------ 1 boinc boinc     36322 Jan 14 16:26 runpilot2-wrapper.sh
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc       100 Jan 14 23:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 00:36:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 23:11 run_atlas
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc       105 Jan 14 23:11 job.xml
[2026-01-15 00:36:12] -rw-r--r-- 2 boinc boinc 595733714 Jan 14 23:11 EVNT.32794306._001087.pool.root.1
[2026-01-15 00:36:12] -rw-r--r-- 2 boinc boinc    592402 Jan 14 23:11 input.tar.gz
[2026-01-15 00:36:12] -rw-r--r-- 2 boinc boinc     15847 Jan 14 23:11 start_atlas.sh
[2026-01-15 00:36:12] drwxrwx--x 2 boinc boinc      4096 Jan 14 23:11 shared
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc         0 Jan 14 23:11 boinc_setup_complete
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc      6206 Jan 14 23:11 init_data.xml
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc         0 Jan 14 23:11 boinc_lockfile
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc      2507 Jan 14 23:11 pandaJob.out
[2026-01-15 00:36:12] -rw------- 1 boinc boinc    999596 Jan 14 23:11 agis_schedconf.cvmfs.json
[2026-01-15 00:36:12] -rw------- 1 boinc boinc   1516246 Jan 14 23:11 agis_ddmendpoints.agis.ALL.json
[2026-01-15 00:36:12] drwx------ 5 boinc boinc      4096 Jan 14 23:11 pilot3
[2026-01-15 00:36:12] -rw------- 1 boinc boinc 155012944 Jan 15 00:35 HITS.48215263._027143.pool.root.1
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc       529 Jan 15 00:35 boinc_task_state.xml
[2026-01-15 00:36:12] -rw------- 1 boinc boinc      1015 Jan 15 00:35 memory_monitor_summary.json
[2026-01-15 00:36:12] -rw------- 1 boinc boinc    223443 Jan 15 00:35 log.48215263._027143.job.log.tgz.1
[2026-01-15 00:36:12] -rw------- 1 boinc boinc      7744 Jan 15 00:35 heartbeat.json
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc      8192 Jan 15 00:35 boinc_mmap_file
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc        26 Jan 15 00:35 wrapper_checkpoint.txt
[2026-01-15 00:36:12] -rw------- 1 boinc boinc       746 Jan 15 00:36 pilotlog.txt
[2026-01-15 00:36:12] -rw------- 1 boinc boinc        95 Jan 15 00:36 pilot_heartbeat.json
[2026-01-15 00:36:12] -rw------- 1 boinc boinc    737528 Jan 15 00:36 log.48215263._027143.job.log.1
[2026-01-15 00:36:12] -rw------- 1 boinc boinc       357 Jan 15 00:36 output.list
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc       620 Jan 15 00:36 runtime_log
[2026-01-15 00:36:12] -rw------- 1 boinc boinc    983040 Jan 15 00:36 result.tar.gz
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc      8897 Jan 15 00:36 runtime_log.err
[2026-01-15 00:36:12] -rw------- 1 boinc boinc       656 Jan 15 00:36 GGuMDmawH08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDgrKDmpM2him.diag
[2026-01-15 00:36:12] -rw-r--r-- 1 boinc boinc     10186 Jan 15 00:36 stderr.txt
[2026-01-15 00:36:12] HITS file was successfully produced:
[2026-01-15 00:36:12] -rw------- 1 boinc boinc 155012944 Jan 15 00:35 shared/HITS.pool.root.1
[2026-01-15 00:36:12]  *** Contents of shared directory: ***
[2026-01-15 00:36:12] total 734716
[2026-01-15 00:36:12] -rw-r--r-- 2 boinc boinc 595733714 Jan 14 23:11 ATLAS.root_0
[2026-01-15 00:36:12] -rw-r--r-- 2 boinc boinc    592402 Jan 14 23:11 input.tar.gz
[2026-01-15 00:36:12] -rw-r--r-- 2 boinc boinc     15847 Jan 14 23:11 start_atlas.sh
[2026-01-15 00:36:12] -rw------- 1 boinc boinc 155012944 Jan 15 00:35 HITS.pool.root.1
[2026-01-15 00:36:12] -rw------- 1 boinc boinc    983040 Jan 15 00:36 result.tar.gz
00:36:14 (310746): run_atlas exited; CPU time 9673.893344
00:36:14 (310746): called boinc_finish(0)

</stderr_txt>
]]>

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