Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:55:59 (19057): wrapper (7.7.26015): starting
11:55:59 (19057): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 11:55:59] Arguments: --nthreads 8
[2026-01-14 11:55:59] Threads: 8
[2026-01-14 11:55:59] Checking for CVMFS
[2026-01-14 11:55:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 11:55:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 11:55:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 11:55:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 11:55:59] 2.11.2.0 2913 118247 116080 155138 3 57 18199404 20275201 1 130560 0 23988039 99.736 8372120 32466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 11:55:59] CVMFS is ok
[2026-01-14 11:55:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 11:55:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 11:55:59] Further information can be found at the LHC@home message board.
[2026-01-14 11:55:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 11:55:59] Checking for apptainer binary...
[2026-01-14 11:55:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 11:55:59] Running /usr/bin/apptainer --version
[2026-01-14 11:56:00] apptainer version 1.3.2-1.el7
[2026-01-14 11:56:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 11:56:01] c-204-29.aglt2.org
[2026-01-14 11:56:01] apptainer works
[2026-01-14 11:56:01] Set ATHENA_PROC_NUMBER=8
[2026-01-14 11:56:01] Set ATHENA_CORE_NUMBER=8
[2026-01-14 11:56:01] Starting ATLAS job with PandaID=6969484505
[2026-01-14 11:56:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:28:44 (10951): wrapper (7.7.26015): starting
12:28:44 (10951): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 12:28:44] Arguments: --nthreads 8
[2026-01-14 12:28:44] Threads: 8
[2026-01-14 12:28:44] This job has been restarted, cleaning up previous attempt
[2026-01-14 12:28:44] Checking for CVMFS
[2026-01-14 12:28:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 12:28:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 12:28:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 12:28:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 12:28:44] 2.11.2.0 2913 118280 116852 155139 2 20 19049432 20275201 2 130560 0 24052711 99.737 8377651 32468 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 12:28:44] CVMFS is ok
[2026-01-14 12:28:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 12:28:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 12:28:44] Further information can be found at the LHC@home message board.
[2026-01-14 12:28:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 12:28:44] Checking for apptainer binary...
[2026-01-14 12:28:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 12:28:44] Running /usr/bin/apptainer --version
[2026-01-14 12:28:44] apptainer version 1.3.2-1.el7
[2026-01-14 12:28:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 12:28:45] c-204-29.aglt2.org
[2026-01-14 12:28:45] apptainer works
[2026-01-14 12:28:45] Set ATHENA_PROC_NUMBER=8
[2026-01-14 12:28:45] Set ATHENA_CORE_NUMBER=8
[2026-01-14 12:28:45] Starting ATLAS job with PandaID=6969484505
[2026-01-14 12:28:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 14:00:13]  *** The last 200 lines of the pilot log: ***
[2026-01-14 14:00:13]  protocol_id=None
[2026-01-14 14:00:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 14:00:13]  replicas=None
[2026-01-14 14:00:13]  scope=mc23_13p6TeV
[2026-01-14 14:00:13]  status=None
[2026-01-14 14:00:13]  status_code=0
[2026-01-14 14:00:13]  storage_token=
[2026-01-14 14:00:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969484505/log.48215263._025792.job.log.tgz.1
[2026-01-14 14:00:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/9a/log.48215263._025792.job.log.tgz.1
[2026-01-14 14:00:13]  workdir=None
[2026-01-14 14:00:13] ]
[2026-01-14 14:00:13] 2026-01-14 18:59:09,305 | INFO     | transferring file log.48215263._025792.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969484505/log.48215263._025792.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 14:00:13] 2026-01-14 18:59:09,305 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969484505/log.48215263._025792.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._025792.job
[2026-01-14 14:00:13] 2026-01-14 18:59:09,332 | INFO     | adding to output.list: log.48215263._025792.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/9a/log.48215263._025792.job.log.tg
[2026-01-14 14:00:13] 2026-01-14 18:59:09,333 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 14:00:13] 2026-01-14 18:59:09,333 | INFO     | summary of transferred files:
[2026-01-14 14:00:13] 2026-01-14 18:59:09,333 | INFO     |  -- lfn=log.48215263._025792.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 14:00:13] 2026-01-14 18:59:09,334 | INFO     | stage-out finished correctly
[2026-01-14 14:00:13] 2026-01-14 18:59:09,427 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 14:00:13] 2026-01-14 18:59:09,516 | INFO     | job 6969484505 has state=finished
[2026-01-14 14:00:13] 2026-01-14 18:59:09,516 | INFO     | preparing for final server update for job 6969484505 in state='finished'
[2026-01-14 14:00:13] 2026-01-14 18:59:09,517 | INFO     | this job has now completed (state=finished)
[2026-01-14 14:00:13] 2026-01-14 18:59:09,517 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 14:00:13] 2026-01-14 18:59:09,517 | INFO     | log transfer has been attempted: DONE
[2026-01-14 14:00:13] 2026-01-14 18:59:09,518 | INFO     | job 6969484505 has finished - writing final server update
[2026-01-14 14:00:13] 2026-01-14 18:59:09,518 | INFO     | total number of processed events: 400 (read)
[2026-01-14 14:00:13] 2026-01-14 18:59:09,519 | INFO     | executing command: lscpu
[2026-01-14 14:00:13] 2026-01-14 18:59:09,548 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 14:00:13] 2026-01-14 18:59:10,558 | INFO     | time since job start (5411s) is within the limit (349056.0s)
[2026-01-14 14:00:13] 2026-01-14 18:59:11,047 | INFO     | monitor loop #399: job 0:6969484505 is in state 'finished'
[2026-01-14 14:00:13] 2026-01-14 18:59:11,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 14:00:13] 2026-01-14 18:59:12,564 | INFO     | time since job start (5413s) is within the limit (349056.0s)
[2026-01-14 14:00:13] 2026-01-14 18:59:13,550 | INFO     | monitor loop #400: job 0:6969484505 is in state 'finished'
[2026-01-14 14:00:13] 2026-01-14 18:59:13,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 14:00:13] 2026-01-14 18:59:14,569 | INFO     | time since job start (5415s) is within the limit (349056.0s)
[2026-01-14 14:00:13] 2026-01-14 18:59:16,054 | INFO     | monitor loop #401: job 0:6969484505 is in state 'finished'
[2026-01-14 14:00:13] 2026-01-14 18:59:16,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 14:00:13] 2026-01-14 18:59:16,574 | INFO     | time since job start (5417s) is within the limit (349056.0s)
[2026-01-14 14:00:13] 2026-01-14 18:59:16,699 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 14:00:13] 2026-01-14 18:59:16,703 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1779.0
[2026-01-14 14:00:13] 2026-01-14 18:59:16,705 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969484505/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 14:00:13] 2026-01-14 18:59:16,706 | INFO     | extracted standard info from prmon json
[2026-01-14 14:00:13] 2026-01-14 18:59:16,706 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 14:00:13] 2026-01-14 18:59:16,706 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 14:00:13] 2026-01-14 18:59:16,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 14:00:13] 2026-01-14 18:59:16,707 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 14:00:13] 2026-01-14 18:59:16,709 | INFO     | fitting pss+swap vs Time
[2026-01-14 14:00:13] 2026-01-14 18:59:16,709 | INFO     | sum of square deviations: 170944600.5
[2026-01-14 14:00:13] 2026-01-14 18:59:16,710 | INFO     | sum of deviations: -12096616254.5
[2026-01-14 14:00:13] 2026-01-14 18:59:16,710 | INFO     | mean x: 1768414544.5
[2026-01-14 14:00:13] 2026-01-14 18:59:16,710 | INFO     | mean y: 2688000.7682926827
[2026-01-14 14:00:13] 2026-01-14 18:59:16,710 | INFO     | intersect: 125141663207.49274
[2026-01-14 14:00:13] 2026-01-14 18:59:16,710 | INFO     | chi2: 0.09168323491884213
[2026-01-14 14:00:13] 2026-01-14 18:59:16,711 | INFO     | current memory leak: -70.76 B/s (using 82 data points, chi2=0.09)
[2026-01-14 14:00:13] 2026-01-14 18:59:16,711 | INFO     | could have reported an average CPU frequency of 1942 MHz (6 samples)
[2026-01-14 14:00:13] 2026-01-14 18:59:16,711 | INFO     | ..............................
[2026-01-14 14:00:13] 2026-01-14 18:59:16,711 | INFO     | . Timing measurements:
[2026-01-14 14:00:13] 2026-01-14 18:59:16,711 | INFO     | . get job = 0 s
[2026-01-14 14:00:13] 2026-01-14 18:59:16,712 | INFO     | . initial setup = 1 s
[2026-01-14 14:00:13] 2026-01-14 18:59:16,712 | INFO     | . payload setup = 7 s
[2026-01-14 14:00:13] 2026-01-14 18:59:16,712 | INFO     | . stage-in = 0 s
[2026-01-14 14:00:13] 2026-01-14 18:59:16,712 | INFO     | . payload execution = 5381 s
[2026-01-14 14:00:13] 2026-01-14 18:59:16,712 | INFO     | . stage-out = 0 s
[2026-01-14 14:00:13] 2026-01-14 18:59:16,712 | INFO     | . log creation = 0 s
[2026-01-14 14:00:13] 2026-01-14 18:59:16,712 | INFO     | ..............................
[2026-01-14 14:00:13] 2026-01-14 18:59:16,806 | INFO     | 
[2026-01-14 14:00:13] 2026-01-14 18:59:16,806 | INFO     | job summary report
[2026-01-14 14:00:13] 2026-01-14 18:59:16,806 | INFO     | --------------------------------------------------
[2026-01-14 14:00:13] 2026-01-14 18:59:16,807 | INFO     | PanDA job id: 6969484505
[2026-01-14 14:00:13] 2026-01-14 18:59:16,807 | INFO     | task id: 48215263
[2026-01-14 14:00:13] 2026-01-14 18:59:16,807 | INFO     | errors: (none)
[2026-01-14 14:00:13] 2026-01-14 18:59:16,807 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 14:00:13] 2026-01-14 18:59:16,807 | INFO     | pilot state: finished 
[2026-01-14 14:00:13] 2026-01-14 18:59:16,808 | INFO     | transexitcode: 0
[2026-01-14 14:00:13] 2026-01-14 18:59:16,808 | INFO     | exeerrorcode: 0
[2026-01-14 14:00:13] 2026-01-14 18:59:16,808 | INFO     | exeerrordiag: 
[2026-01-14 14:00:13] 2026-01-14 18:59:16,808 | INFO     | exitcode: 0
[2026-01-14 14:00:13] 2026-01-14 18:59:16,808 | INFO     | exitmsg: OK
[2026-01-14 14:00:13] 2026-01-14 18:59:16,808 | INFO     | cpuconsumptiontime: 35555 s
[2026-01-14 14:00:13] 2026-01-14 18:59:16,809 | INFO     | nevents: 400
[2026-01-14 14:00:13] 2026-01-14 18:59:16,809 | INFO     | neventsw: 0
[2026-01-14 14:00:13] 2026-01-14 18:59:16,809 | INFO     | pid: 25025
[2026-01-14 14:00:13] 2026-01-14 18:59:16,809 | INFO     | pgrp: 25025
[2026-01-14 14:00:13] 2026-01-14 18:59:16,809 | INFO     | corecount: 8
[2026-01-14 14:00:13] 2026-01-14 18:59:16,809 | INFO     | event service: False
[2026-01-14 14:00:13] 2026-01-14 18:59:16,810 | INFO     | sizes: {0: 2283780, 1: 2283979, 6: 2284241, 11: 2284269, 5392: 2310752, 5394: 2319934, 5401: 2320072}
[2026-01-14 14:00:13] 2026-01-14 18:59:16,810 | INFO     | --------------------------------------------------
[2026-01-14 14:00:13] 2026-01-14 18:59:16,810 | INFO     | 
[2026-01-14 14:00:13] 2026-01-14 18:59:16,810 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 14:00:13] 2026-01-14 18:59:16,838 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,839 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,840 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,841 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 14:00:13] 2026-01-14 18:59:16,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,841 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 14:00:13] 2026-01-14 18:59:16,841 | INFO     | job 6969484505 has completed (purged errors)
[2026-01-14 14:00:13] 2026-01-14 18:59:16,842 | INFO     | overall cleanup function is called
[2026-01-14 14:00:13] 2026-01-14 18:59:17,846 | INFO     | --- collectZombieJob: --- 10, [25025]
[2026-01-14 14:00:13] 2026-01-14 18:59:17,846 | INFO     | zombie collector waiting for pid 25025
[2026-01-14 14:00:13] 2026-01-14 18:59:17,847 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 14:00:13] 2026-01-14 18:59:17,847 | INFO     | collected zombie processes
[2026-01-14 14:00:13] 2026-01-14 18:59:17,847 | INFO     | will attempt to kill all subprocesses of pid=25025
[2026-01-14 14:00:13] 2026-01-14 18:59:17,938 | INFO     | process IDs to be killed: [25025] (in reverse order)
[2026-01-14 14:00:13] 2026-01-14 18:59:18,053 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 14:00:13] 2026-01-14 18:59:18,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 14:00:13] 2026-01-14 18:59:18,057 | INFO     | did not find any defunct processes belonging to 25025
[2026-01-14 14:00:13] 2026-01-14 18:59:18,060 | INFO     | did not find any defunct processes belonging to 25025
[2026-01-14 14:00:13] 2026-01-14 18:59:18,060 | INFO     | ready for new job
[2026-01-14 14:00:13] 2026-01-14 18:59:18,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 14:00:13] 2026-01-14 18:59:18,062 | INFO     | ***************************************
[2026-01-14 14:00:13] 2026-01-14 18:59:18,063 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 14:00:13] 2026-01-14 18:59:18,063 | INFO     | ***************************************
[2026-01-14 14:00:13] 2026-01-14 18:59:18,063 | INFO     | 
[2026-01-14 14:00:13] 2026-01-14 18:59:18,064 | INFO     | architecture information:
[2026-01-14 14:00:13] 2026-01-14 18:59:18,064 | INFO     | executing command: cat /etc/os-release
[2026-01-14 14:00:13] 2026-01-14 18:59:18,084 | INFO     | cat /etc/os-release:
[2026-01-14 14:00:13] NAME="CentOS Linux"
[2026-01-14 14:00:13] VERSION="7 (Core)"
[2026-01-14 14:00:13] ID="centos"
[2026-01-14 14:00:13] ID_LIKE="rhel fedora"
[2026-01-14 14:00:13] VERSION_ID="7"
[2026-01-14 14:00:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 14:00:13] ANSI_COLOR="0;31"
[2026-01-14 14:00:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 14:00:13] HOME_URL="https://www.centos.org/"
[2026-01-14 14:00:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 14:00:13] 
[2026-01-14 14:00:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 14:00:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 14:00:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 14:00:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 14:00:13] 
[2026-01-14 14:00:13] 2026-01-14 18:59:18,084 | INFO     | ***************************************
[2026-01-14 14:00:13] 2026-01-14 18:59:18,586 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 14:00:13] 2026-01-14 18:59:18,607 | INFO     | sufficient remaining disk space (17832083456 B)
[2026-01-14 14:00:13] 2026-01-14 18:59:18,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 14:00:13] 2026-01-14 18:59:18,608 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 14:00:13] 2026-01-14 18:59:18,608 | INFO     | update_server=False
[2026-01-14 14:00:13] 2026-01-14 18:59:18,608 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 14:00:13] 2026-01-14 18:59:18,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 14:00:13] 2026-01-14 18:59:19,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 14:00:13] 2026-01-14 18:59:19,560 | INFO     | aborting loop
[2026-01-14 14:00:13] 2026-01-14 18:59:19,584 | INFO     | all data control threads have been joined
[2026-01-14 14:00:13] 2026-01-14 18:59:19,610 | INFO     | [job] queue monitor thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:19,613 | INFO     | [job] retrieve thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:19,862 | INFO     | all job control threads have been joined
[2026-01-14 14:00:13] 2026-01-14 18:59:19,875 | INFO     | all payload control threads have been joined
[2026-01-14 14:00:13] 2026-01-14 18:59:19,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 14:00:13] 2026-01-14 18:59:20,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 14:00:13] 2026-01-14 18:59:20,072 | INFO     | [payload] failed_post thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:20,182 | INFO     | [payload] validate_post thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:20,315 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:20,555 | INFO     | [data] copytool_in thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:20,564 | INFO     | [job] job monitor thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:20,590 | INFO     | [data] control thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:20,868 | INFO     | [job] control thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:20,880 | INFO     | [payload] control thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:20,896 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:21,099 | INFO     | [job] validate thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:21,100 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:21,946 | INFO     | [data] copytool_out thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:24,030 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:29,154 | INFO     | job.realtimelogging is not enabled
[2026-01-14 14:00:13] 2026-01-14 18:59:30,159 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 14:00:13] 2026-01-14 18:59:49,780 | INFO     | PID=15384 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 14:00:13] 2026-01-14 18:59:49,781 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 14:00:13] 2026-01-14 18:59:49,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 14:00:13] 2026-01-14 18:59:49,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 14:00:13] 2026-01-14 19:00:07,959 | INFO     | [monitor] cgroup control has ended
[2026-01-14 14:00:13] 2026-01-14 19:00:08,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671715501888)>', '<ExcThread(monitor, started 139670960715520)>']
[2026-01-14 14:00:13] 2026-01-14 19:00:08,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 14:00:13] 2026-01-14 19:00:08,849 | INFO     | [monitor] control thread has ended
[2026-01-14 14:00:13] 2026-01-14 19:00:13,448 | INFO     | all workflow threads have been joined
[2026-01-14 14:00:13] 2026-01-14 19:00:13,448 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 14:00:13] 2026-01-14 19:00:13,448 | INFO     | traces error code: 0
[2026-01-14 14:00:13] 2026-01-14 19:00:13,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 14:00:13] 2026-01-14 19:00:13,546 [wrapper] ==== pilot stdout END ====
[2026-01-14 14:00:13] 2026-01-14 19:00:13,551 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 14:00:13] 2026-01-14 19:00:13,556 [wrapper] pilotpid: 15384
[2026-01-14 14:00:13] 2026-01-14 19:00:13,561 [wrapper] Pilot exit status: 0
[2026-01-14 14:00:13] 2026-01-14 19:00:13,581 [wrapper] pandaids: 6969484505 6969484505
[2026-01-14 14:00:13] 2026-01-14 19:00:13,636 [wrapper] cleanup supervisor_pilot 17188 15385
[2026-01-14 14:00:13] 2026-01-14 19:00:13,642 [wrapper] Test setup, not cleaning
[2026-01-14 14:00:13] 2026-01-14 19:00:13,646 [wrapper] apfmon messages muted
[2026-01-14 14:00:13] 2026-01-14 19:00:13,651 [wrapper] ==== wrapper stdout END ====
[2026-01-14 14:00:13] 2026-01-14 19:00:13,657 [wrapper] ==== wrapper stderr END ====
[2026-01-14 14:00:13]  *** Error codes and diagnostics ***
[2026-01-14 14:00:13]     "exeErrorCode": 0,
[2026-01-14 14:00:13]     "exeErrorDiag": "",
[2026-01-14 14:00:13]     "pilotErrorCode": 0,
[2026-01-14 14:00:13]     "pilotErrorDiag": "",
[2026-01-14 14:00:13]  *** Listing of results directory ***
[2026-01-14 14:00:13] total 1335168
[2026-01-14 14:00:13] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 09:17 pilot3.tar.gz
[2026-01-14 14:00:13] -rwx------ 1 boincer umatlas     36322 Jan 14 09:21 runpilot2-wrapper.sh
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 09:25 queuedata.json
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas       100 Jan 14 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 14:00:13] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 11:55 run_atlas
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas       105 Jan 14 11:55 job.xml
[2026-01-14 14:00:13] -rw-r--r-- 3 boincer umatlas 603546555 Jan 14 11:55 EVNT.32794306._001033.pool.root.1
[2026-01-14 14:00:13] -rw-r--r-- 3 boincer umatlas 603546555 Jan 14 11:55 ATLAS.root_0
[2026-01-14 14:00:13] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 11:55 start_atlas.sh
[2026-01-14 14:00:13] drwxrwx--x 2 boincer umatlas      4096 Jan 14 11:55 shared
[2026-01-14 14:00:13] -rw-r--r-- 2 boincer umatlas    592406 Jan 14 11:55 input.tar.gz
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas         0 Jan 14 11:55 boinc_lockfile
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas   1516246 Jan 14 11:56 agis_ddmendpoints.agis.ALL.json
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas      2508 Jan 14 12:28 pandaJob.out
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas        57 Jan 14 12:28 setup.sh.local
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas    997956 Jan 14 12:28 agis_schedconf.cvmfs.json
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas      5910 Jan 14 13:55 init_data.xml
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas       530 Jan 14 13:58 boinc_task_state.xml
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas 153989382 Jan 14 13:58 HITS.48215263._025792.pool.root.1
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas      1049 Jan 14 13:59 memory_monitor_summary.json
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas    326622 Jan 14 13:59 log.48215263._025792.job.log.tgz.1
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas      7850 Jan 14 13:59 heartbeat.json
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas        96 Jan 14 13:59 pilot_heartbeat.json
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas        27 Jan 14 14:00 wrapper_checkpoint.txt
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 14:00 boinc_mmap_file
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas      4818 Jan 14 14:00 pilotlog.txt
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas    768913 Jan 14 14:00 log.48215263._025792.job.log.1
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas       357 Jan 14 14:00 output.list
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas       620 Jan 14 14:00 runtime_log
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas   1116160 Jan 14 14:00 result.tar.gz
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas       783 Jan 14 14:00 YGHNDmZvG08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7OlKDmmnIwDn.diag
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas      9427 Jan 14 14:00 runtime_log.err
[2026-01-14 14:00:13] -rw-r--r-- 1 boincer umatlas     23956 Jan 14 14:00 stderr.txt
[2026-01-14 14:00:13] HITS file was successfully produced:
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas 153989382 Jan 14 13:58 shared/HITS.pool.root.1
[2026-01-14 14:00:13]  *** Contents of shared directory: ***
[2026-01-14 14:00:13] total 741484
[2026-01-14 14:00:13] -rw-r--r-- 3 boincer umatlas 603546555 Jan 14 11:55 ATLAS.root_0
[2026-01-14 14:00:13] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 11:55 start_atlas.sh
[2026-01-14 14:00:13] -rw-r--r-- 2 boincer umatlas    592406 Jan 14 11:55 input.tar.gz
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas 153989382 Jan 14 13:58 HITS.pool.root.1
[2026-01-14 14:00:13] -rw------- 1 boincer umatlas   1116160 Jan 14 14:00 result.tar.gz
14:00:15 (10951): run_atlas exited; CPU time 35502.278073
14:00:15 (10951): called boinc_finish(0)

</stderr_txt>
]]>

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