Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:21:29 (228390): wrapper (7.7.26015): starting
16:21:29 (228390): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 16:21:29] Arguments: --nthreads 8
[2026-01-14 16:21:29] Threads: 8
[2026-01-14 16:21:29] Checking for CVMFS
[2026-01-14 16:21:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 16:21:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 16:21:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 16:21:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 16:21:33] 2.13.3.0 228658 0 31712 155138 3 1 3472627 6144001 0 130560 0 0 0.000 1336 1153 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-14 16:21:33] CVMFS is ok
[2026-01-14 16:21:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 16:21:33] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-14 16:21:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-14 16:21:33] Further information can be found at the LHC@home message board.
[2026-01-14 16:21:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 16:21:33] Checking for apptainer binary...
[2026-01-14 16:21:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 16:21:33] Running /usr/bin/apptainer --version
[2026-01-14 16:21:33] apptainer version 1.4.5
[2026-01-14 16:21:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 16:21:33] stone
[2026-01-14 16:21:33] apptainer works
[2026-01-14 16:21:33] Set ATHENA_PROC_NUMBER=8
[2026-01-14 16:21:33] Set ATHENA_CORE_NUMBER=8
[2026-01-14 16:21:33] Starting ATLAS job with PandaID=6969483638
[2026-01-14 16:21:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 17:22:04]  *** The last 200 lines of the pilot log: ***
[2026-01-14 17:22:04] 2026-01-14 17:21:13,456 | INFO     | summary of transferred files:
[2026-01-14 17:22:04] 2026-01-14 17:21:13,456 | INFO     |  -- lfn=log.48215263._024955.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 17:22:04] 2026-01-14 17:21:13,456 | INFO     | stage-out finished correctly
[2026-01-14 17:22:04] 2026-01-14 17:21:14,425 | INFO     | monitor loop #272: job 0:6969483638 is in state 'finished'
[2026-01-14 17:22:04] 2026-01-14 17:21:14,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:22:04] 2026-01-14 17:21:14,883 | INFO     | time since job start (3571s) is within the limit (349056.0s)
[2026-01-14 17:22:04] 2026-01-14 17:21:16,554 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 17:22:04] 2026-01-14 17:21:16,889 | INFO     | time since job start (3573s) is within the limit (349056.0s)
[2026-01-14 17:22:04] 2026-01-14 17:21:16,929 | INFO     | monitor loop #273: job 0:6969483638 is in state 'finished'
[2026-01-14 17:22:04] 2026-01-14 17:21:16,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:22:04] 2026-01-14 17:21:18,855 | INFO     | job 6969483638 has state=finished
[2026-01-14 17:22:04] 2026-01-14 17:21:18,855 | INFO     | preparing for final server update for job 6969483638 in state='finished'
[2026-01-14 17:22:04] 2026-01-14 17:21:18,857 | INFO     | this job has now completed (state=finished)
[2026-01-14 17:22:04] 2026-01-14 17:21:18,857 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 17:22:04] 2026-01-14 17:21:18,857 | INFO     | log transfer has been attempted: DONE
[2026-01-14 17:22:04] 2026-01-14 17:21:18,857 | INFO     | job 6969483638 has finished - writing final server update
[2026-01-14 17:22:04] 2026-01-14 17:21:18,858 | INFO     | total number of processed events: 400 (read)
[2026-01-14 17:22:04] 2026-01-14 17:21:18,860 | INFO     | executing command: lscpu
[2026-01-14 17:22:04] 2026-01-14 17:21:18,871 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 17:22:04] 2026-01-14 17:21:18,895 | INFO     | time since job start (3575s) is within the limit (349056.0s)
[2026-01-14 17:22:04] 2026-01-14 17:21:19,432 | INFO     | monitor loop #274: job 0:6969483638 is in state 'finished'
[2026-01-14 17:22:04] 2026-01-14 17:21:19,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:22:04] 2026-01-14 17:21:20,902 | INFO     | time since job start (3577s) is within the limit (349056.0s)
[2026-01-14 17:22:04] 2026-01-14 17:21:21,936 | INFO     | monitor loop #275: job 0:6969483638 is in state 'finished'
[2026-01-14 17:22:04] 2026-01-14 17:21:21,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:22:04] 2026-01-14 17:21:21,990 | INFO     | PID=232906 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 17:22:04] 2026-01-14 17:21:22,991 | INFO     | time since job start (3579s) is within the limit (349056.0s)
[2026-01-14 17:22:04] 2026-01-14 17:21:24,439 | INFO     | monitor loop #276: job 0:6969483638 is in state 'finished'
[2026-01-14 17:22:04] 2026-01-14 17:21:24,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:22:04] 2026-01-14 17:21:24,996 | INFO     | time since job start (3581s) is within the limit (349056.0s)
[2026-01-14 17:22:04] 2026-01-14 17:21:26,942 | INFO     | monitor loop #277: job 0:6969483638 is in state 'finished'
[2026-01-14 17:22:04] 2026-01-14 17:21:26,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:22:04] 2026-01-14 17:21:27,001 | INFO     | time since job start (3584s) is within the limit (349056.0s)
[2026-01-14 17:22:04] 2026-01-14 17:21:29,006 | INFO     | time since job start (3586s) is within the limit (349056.0s)
[2026-01-14 17:22:04] 2026-01-14 17:21:29,445 | INFO     | monitor loop #278: job 0:6969483638 is in state 'finished'
[2026-01-14 17:22:04] 2026-01-14 17:21:29,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 17:22:04] 2026-01-14 17:21:31,011 | INFO     | time since job start (3588s) is within the limit (349056.0s)
[2026-01-14 17:22:04] 2026-01-14 17:21:31,547 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 17:22:04] 2026-01-14 17:21:31,548 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3373.272875
[2026-01-14 17:22:04] 2026-01-14 17:21:31,549 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6969483638/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 17:22:04] 2026-01-14 17:21:31,549 | INFO     | extracted standard info from prmon json
[2026-01-14 17:22:04] 2026-01-14 17:21:31,549 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 17:22:04] 2026-01-14 17:21:31,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 17:22:04] 2026-01-14 17:21:31,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 17:22:04] 2026-01-14 17:21:31,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 17:22:04] 2026-01-14 17:21:31,550 | INFO     | fitting pss+swap vs Time
[2026-01-14 17:22:04] 2026-01-14 17:21:31,550 | INFO     | sum of square deviations: 43584073.0
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | sum of deviations: -716737159.5
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | mean x: 1768409582.5
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | mean y: 3005131.8653846155
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | intersect: 29084382198.061813
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | chi2: 0.03884370913369824
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | current memory leak: -16.44 B/s (using 52 data points, chi2=0.04)
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | could have reported an average CPU frequency of 3489 MHz (5 samples)
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | ..............................
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | . Timing measurements:
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | . get job = 0 s
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | . initial setup = 1 s
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | . payload setup = 3 s
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | . stage-in = 0 s
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | . payload execution = 3548 s
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | . stage-out = 0 s
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | . log creation = 0 s
[2026-01-14 17:22:04] 2026-01-14 17:21:31,551 | INFO     | ..............................
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | 
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | job summary report
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | --------------------------------------------------
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | PanDA job id: 6969483638
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | task id: 48215263
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | errors: (none)
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | pilot state: finished 
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | transexitcode: 0
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | exeerrorcode: 0
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | exeerrordiag: 
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | exitcode: 0
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | exitmsg: OK
[2026-01-14 17:22:04] 2026-01-14 17:21:31,587 | INFO     | cpuconsumptiontime: 25816 s
[2026-01-14 17:22:04] 2026-01-14 17:21:31,588 | INFO     | nevents: 400
[2026-01-14 17:22:04] 2026-01-14 17:21:31,588 | INFO     | neventsw: 0
[2026-01-14 17:22:04] 2026-01-14 17:21:31,588 | INFO     | pid: 239390
[2026-01-14 17:22:04] 2026-01-14 17:21:31,588 | INFO     | pgrp: 239390
[2026-01-14 17:22:04] 2026-01-14 17:21:31,588 | INFO     | corecount: 8
[2026-01-14 17:22:04] 2026-01-14 17:21:31,588 | INFO     | event service: False
[2026-01-14 17:22:04] 2026-01-14 17:21:31,588 | INFO     | sizes: {0: 2283949, 2: 2284211, 11: 2284239, 3556: 2309931, 3558: 2318929, 3561: 2318985, 3576: 2319339}
[2026-01-14 17:22:04] 2026-01-14 17:21:31,588 | INFO     | --------------------------------------------------
[2026-01-14 17:22:04] 2026-01-14 17:21:31,588 | INFO     | 
[2026-01-14 17:22:04] 2026-01-14 17:21:31,588 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-14 17:22:04] 2026-01-14 17:21:31,598 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,600 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 17:22:04] 2026-01-14 17:21:31,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,600 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 17:22:04] 2026-01-14 17:21:31,600 | INFO     | job 6969483638 has completed (purged errors)
[2026-01-14 17:22:04] 2026-01-14 17:21:31,600 | INFO     | overall cleanup function is called
[2026-01-14 17:22:04] 2026-01-14 17:21:32,606 | INFO     | --- collectZombieJob: --- 10, [239390]
[2026-01-14 17:22:04] 2026-01-14 17:21:32,606 | INFO     | zombie collector waiting for pid 239390
[2026-01-14 17:22:04] 2026-01-14 17:21:32,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 17:22:04] 2026-01-14 17:21:32,606 | INFO     | collected zombie processes
[2026-01-14 17:22:04] 2026-01-14 17:21:32,606 | INFO     | will attempt to kill all subprocesses of pid=239390
[2026-01-14 17:22:04] 2026-01-14 17:21:32,654 | INFO     | process IDs to be killed: [239390] (in reverse order)
[2026-01-14 17:22:04] 2026-01-14 17:21:32,672 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 17:22:04] 2026-01-14 17:21:32,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 17:22:04] 2026-01-14 17:21:32,673 | INFO     | did not find any defunct processes belonging to 239390
[2026-01-14 17:22:04] 2026-01-14 17:21:32,674 | INFO     | did not find any defunct processes belonging to 239390
[2026-01-14 17:22:04] 2026-01-14 17:21:32,674 | INFO     | ready for new job
[2026-01-14 17:22:04] 2026-01-14 17:21:32,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 17:22:04] 2026-01-14 17:21:32,675 | INFO     | ***************************************
[2026-01-14 17:22:04] 2026-01-14 17:21:32,675 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 17:22:04] 2026-01-14 17:21:32,675 | INFO     | ***************************************
[2026-01-14 17:22:04] 2026-01-14 17:21:32,675 | INFO     | 
[2026-01-14 17:22:04] 2026-01-14 17:21:32,676 | INFO     | architecture information:
[2026-01-14 17:22:04] 2026-01-14 17:21:32,676 | INFO     | executing command: cat /etc/os-release
[2026-01-14 17:22:04] 2026-01-14 17:21:32,682 | INFO     | cat /etc/os-release:
[2026-01-14 17:22:04] NAME="CentOS Linux"
[2026-01-14 17:22:04] VERSION="7 (Core)"
[2026-01-14 17:22:04] ID="centos"
[2026-01-14 17:22:04] ID_LIKE="rhel fedora"
[2026-01-14 17:22:04] VERSION_ID="7"
[2026-01-14 17:22:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 17:22:04] ANSI_COLOR="0;31"
[2026-01-14 17:22:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 17:22:04] HOME_URL="https://www.centos.org/"
[2026-01-14 17:22:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 17:22:04] 
[2026-01-14 17:22:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 17:22:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 17:22:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 17:22:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 17:22:04] 
[2026-01-14 17:22:04] 2026-01-14 17:21:32,683 | INFO     | ***************************************
[2026-01-14 17:22:04] 2026-01-14 17:21:33,186 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-14 17:22:04] 2026-01-14 17:21:33,195 | INFO     | sufficient remaining disk space (13714325504 B)
[2026-01-14 17:22:04] 2026-01-14 17:21:33,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 17:22:04] 2026-01-14 17:21:33,195 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 17:22:04] 2026-01-14 17:21:33,195 | INFO     | update_server=False
[2026-01-14 17:22:04] 2026-01-14 17:21:33,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 17:22:04] 2026-01-14 17:21:33,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 17:22:04] 2026-01-14 17:21:33,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 17:22:04] 2026-01-14 17:21:33,196 | INFO     | aborting loop
[2026-01-14 17:22:04] 2026-01-14 17:21:33,368 | INFO     | all payload control threads have been joined
[2026-01-14 17:22:04] 2026-01-14 17:21:33,893 | INFO     | all data control threads have been joined
[2026-01-14 17:22:04] 2026-01-14 17:21:34,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 17:22:04] 2026-01-14 17:21:34,201 | INFO     | [job] retrieve thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:34,201 | INFO     | [job] job monitor thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:34,201 | INFO     | [job] queue monitor thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:34,373 | INFO     | [payload] control thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:34,698 | INFO     | [data] copytool_in thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:34,896 | INFO     | all job control threads have been joined
[2026-01-14 17:22:04] 2026-01-14 17:21:34,898 | INFO     | [data] control thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:35,179 | INFO     | [job] validate thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:35,296 | INFO     | [payload] validate_post thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:35,343 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:35,367 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:35,472 | INFO     | [payload] failed_post thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:35,614 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:35,902 | INFO     | [job] control thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:36,021 | INFO     | [data] copytool_out thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:36,163 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 17:22:04] 2026-01-14 17:21:40,169 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:41,510 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-01-14 17:22:04] 2026-01-14 17:21:43,463 | INFO     | job.realtimelogging is not enabled
[2026-01-14 17:22:04] 2026-01-14 17:21:44,468 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 17:22:04] 2026-01-14 17:21:48,916 | INFO     | [monitor] cgroup control has ended
[2026-01-14 17:22:04] 2026-01-14 17:21:50,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762690111296)>', '<ExcThread(monitor, started 139761918404352)>']
[2026-01-14 17:22:04] 2026-01-14 17:21:55,756 | INFO     | all workflow threads have been joined
[2026-01-14 17:22:04] 2026-01-14 17:21:55,756 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 17:22:04] 2026-01-14 17:21:55,757 | INFO     | traces error code: 0
[2026-01-14 17:22:04] 2026-01-14 17:21:55,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 17:22:04] 2026-01-14 17:22:04,155 | INFO     | PID=232906 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 17:22:04] 2026-01-14 17:22:04,155 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 17:22:04] 2026-01-14 17:22:04,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 17:22:04] 2026-01-14 17:22:04,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 17:22:04] 2026-01-14 17:22:04,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 17:22:04] 2026-01-14 17:22:04,156 | INFO     | [monitor] control thread has ended
[2026-01-14 17:22:04] 2026-01-14 17:22:04,214 [wrapper] ==== pilot stdout END ====
[2026-01-14 17:22:04] 2026-01-14 17:22:04,216 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 17:22:04] 2026-01-14 17:22:04,217 [wrapper] pilotpid: 232906
[2026-01-14 17:22:04] 2026-01-14 17:22:04,218 [wrapper] Pilot exit status: 0
[2026-01-14 17:22:04] 2026-01-14 17:22:04,222 [wrapper] pandaids: 6969483638
[2026-01-14 17:22:04] 2026-01-14 17:22:04,233 [wrapper] cleanup supervisor_pilot  266954 232907
[2026-01-14 17:22:04] 2026-01-14 17:22:04,234 [wrapper] Test setup, not cleaning
[2026-01-14 17:22:04] 2026-01-14 17:22:04,236 [wrapper] apfmon messages muted
[2026-01-14 17:22:04] 2026-01-14 17:22:04,237 [wrapper] ==== wrapper stdout END ====
[2026-01-14 17:22:04] 2026-01-14 17:22:04,238 [wrapper] ==== wrapper stderr END ====
[2026-01-14 17:22:04]  *** Error codes and diagnostics ***
[2026-01-14 17:22:04]     "exeErrorCode": 0,
[2026-01-14 17:22:04]     "exeErrorDiag": "",
[2026-01-14 17:22:04]     "pilotErrorCode": 0,
[2026-01-14 17:22:04]     "pilotErrorDiag": "",
[2026-01-14 17:22:04]  *** Listing of results directory ***
[2026-01-14 17:22:04] total 738516
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc      5112 Jan 14 14:17 queuedata.json
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc    579449 Jan 14 14:17 pilot3.tar.gz
[2026-01-14 17:22:04] -rwx------ 1 boinc boinc     36322 Jan 14 14:17 runpilot2-wrapper.sh
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc       100 Jan 14 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 17:22:04] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 16:21 run_atlas
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc       105 Jan 14 16:21 job.xml
[2026-01-14 17:22:04] -rw-r--r-- 2 boinc boinc 594167641 Jan 14 16:21 EVNT.32794306._000999.pool.root.1
[2026-01-14 17:22:04] -rw-r--r-- 2 boinc boinc    592401 Jan 14 16:21 input.tar.gz
[2026-01-14 17:22:04] -rw-r--r-- 2 boinc boinc     15847 Jan 14 16:21 start_atlas.sh
[2026-01-14 17:22:04] drwxrwx--x 2 boinc boinc      4096 Jan 14 16:21 shared
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc         0 Jan 14 16:21 boinc_setup_complete
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc      6096 Jan 14 16:21 init_data.xml
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc         0 Jan 14 16:21 boinc_lockfile
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc      2507 Jan 14 16:21 pandaJob.out
[2026-01-14 17:22:04] -rw------- 1 boinc boinc    997956 Jan 14 16:21 agis_schedconf.cvmfs.json
[2026-01-14 17:22:04] -rw------- 1 boinc boinc   1516246 Jan 14 16:21 agis_ddmendpoints.agis.ALL.json
[2026-01-14 17:22:04] drwx------ 5 boinc boinc      4096 Jan 14 16:21 pilot3
[2026-01-14 17:22:04] -rw------- 1 boinc boinc 156447373 Jan 14 17:20 HITS.48215263._024955.pool.root.1
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc       530 Jan 14 17:20 boinc_task_state.xml
[2026-01-14 17:22:04] -rw------- 1 boinc boinc      1039 Jan 14 17:21 memory_monitor_summary.json
[2026-01-14 17:22:04] -rw------- 1 boinc boinc    316753 Jan 14 17:21 log.48215263._024955.job.log.tgz.1
[2026-01-14 17:22:04] -rw------- 1 boinc boinc        95 Jan 14 17:21 pilot_heartbeat.json
[2026-01-14 17:22:04] -rw------- 1 boinc boinc      7751 Jan 14 17:21 heartbeat.json
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc      8192 Jan 14 17:21 boinc_mmap_file
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc        27 Jan 14 17:21 wrapper_checkpoint.txt
[2026-01-14 17:22:04] -rw------- 1 boinc boinc       746 Jan 14 17:22 pilotlog.txt
[2026-01-14 17:22:04] -rw------- 1 boinc boinc    534529 Jan 14 17:22 log.48215263._024955.job.log.1
[2026-01-14 17:22:04] -rw------- 1 boinc boinc       357 Jan 14 17:22 output.list
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc       620 Jan 14 17:22 runtime_log
[2026-01-14 17:22:04] -rw------- 1 boinc boinc    870400 Jan 14 17:22 result.tar.gz
[2026-01-14 17:22:04] -rw------- 1 boinc boinc       638 Jan 14 17:22 vpgLDmIsG08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyNrKDm9VfmQo.diag
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc      8760 Jan 14 17:22 runtime_log.err
[2026-01-14 17:22:04] -rw-r--r-- 1 boinc boinc     22268 Jan 14 17:22 stderr.txt
[2026-01-14 17:22:04] HITS file was successfully produced:
[2026-01-14 17:22:04] -rw------- 1 boinc boinc 156447373 Jan 14 17:20 shared/HITS.pool.root.1
[2026-01-14 17:22:04]  *** Contents of shared directory: ***
[2026-01-14 17:22:04] total 734484
[2026-01-14 17:22:04] -rw-r--r-- 2 boinc boinc 594167641 Jan 14 16:21 ATLAS.root_0
[2026-01-14 17:22:04] -rw-r--r-- 2 boinc boinc    592401 Jan 14 16:21 input.tar.gz
[2026-01-14 17:22:04] -rw-r--r-- 2 boinc boinc     15847 Jan 14 16:21 start_atlas.sh
[2026-01-14 17:22:04] -rw------- 1 boinc boinc 156447373 Jan 14 17:20 HITS.pool.root.1
[2026-01-14 17:22:04] -rw------- 1 boinc boinc    870400 Jan 14 17:22 result.tar.gz
17:22:05 (228390): run_atlas exited; CPU time 25809.923868
17:22:05 (228390): called boinc_finish(0)

</stderr_txt>
]]>

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