Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:00:39 (8342): wrapper (7.7.26015): starting
11:00:39 (8342): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 11:00:39] Arguments: --nthreads 12
[2026-01-14 11:00:39] Threads: 12
[2026-01-14 11:00:39] Checking for CVMFS
[2026-01-14 11:00:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 11:00:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 11:00:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 11:00:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 11:00:40] 2.11.2.0 2916 358408 99468 155136 2 59 17500541 20275200 1 130560 1 150577084 99.944 22185520 17022 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 11:00:40] CVMFS is ok
[2026-01-14 11:00:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 11:00:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 11:00:40] Further information can be found at the LHC@home message board.
[2026-01-14 11:00:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 11:00:40] Checking for apptainer binary...
[2026-01-14 11:00:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 11:00:40] Running /usr/bin/apptainer --version
[2026-01-14 11:00:40] apptainer version 1.3.2-1.el7
[2026-01-14 11:00:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 11:00:41] c-205-23.aglt2.org
[2026-01-14 11:00:41] apptainer works
[2026-01-14 11:00:41] Set ATHENA_PROC_NUMBER=12
[2026-01-14 11:00:41] Set ATHENA_CORE_NUMBER=12
[2026-01-14 11:00:41] Starting ATLAS job with PandaID=6969418818
[2026-01-14 11:00:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 11:50:22]  *** The last 200 lines of the pilot log: ***
[2026-01-14 11:50:22]  replicas=None
[2026-01-14 11:50:22]  scope=mc23_13p6TeV
[2026-01-14 11:50:22]  status=None
[2026-01-14 11:50:22]  status_code=0
[2026-01-14 11:50:22]  storage_token=
[2026-01-14 11:50:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969418818/log.48215263._019164.job.log.tgz.1
[2026-01-14 11:50:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/ab/log.48215263._019164.job.log.tgz.1
[2026-01-14 11:50:22]  workdir=None
[2026-01-14 11:50:22] ]
[2026-01-14 11:50:22] 2026-01-14 16:49:42,893 | INFO     | transferring file log.48215263._019164.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969418818/log.48215263._019164.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 11:50:22] 2026-01-14 16:49:42,894 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969418818/log.48215263._019164.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._019164.job
[2026-01-14 11:50:22] 2026-01-14 16:49:42,915 | INFO     | adding to output.list: log.48215263._019164.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/ab/log.48215263._019164.job.log.tg
[2026-01-14 11:50:22] 2026-01-14 16:49:42,916 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 11:50:22] 2026-01-14 16:49:42,916 | INFO     | summary of transferred files:
[2026-01-14 11:50:22] 2026-01-14 16:49:42,916 | INFO     |  -- lfn=log.48215263._019164.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 11:50:22] 2026-01-14 16:49:42,916 | INFO     | stage-out finished correctly
[2026-01-14 11:50:22] 2026-01-14 16:49:42,999 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 11:50:22] 2026-01-14 16:49:44,150 | INFO     | job 6969418818 has state=finished
[2026-01-14 11:50:22] 2026-01-14 16:49:44,150 | INFO     | preparing for final server update for job 6969418818 in state='finished'
[2026-01-14 11:50:22] 2026-01-14 16:49:44,210 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-14 11:50:22] 2026-01-14 16:49:44,210 | INFO     | this job has now completed (state=finished)
[2026-01-14 11:50:22] 2026-01-14 16:49:44,210 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 11:50:22] 2026-01-14 16:49:44,211 | INFO     | log transfer has been attempted: DONE
[2026-01-14 11:50:22] 2026-01-14 16:49:44,211 | INFO     | job 6969418818 has finished - writing final server update
[2026-01-14 11:50:22] 2026-01-14 16:49:44,211 | INFO     | total number of processed events: 400 (read)
[2026-01-14 11:50:22] 2026-01-14 16:49:44,212 | INFO     | executing command: lscpu
[2026-01-14 11:50:22] 2026-01-14 16:49:44,236 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 11:50:22] 2026-01-14 16:49:44,462 | INFO     | monitor loop #223: job 0:6969418818 is in state 'finished'
[2026-01-14 11:50:22] 2026-01-14 16:49:44,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:50:22] 2026-01-14 16:49:44,694 | INFO     | time since job start (2927s) is within the limit (349056.0s)
[2026-01-14 11:50:22] 2026-01-14 16:49:46,700 | INFO     | time since job start (2929s) is within the limit (349056.0s)
[2026-01-14 11:50:22] 2026-01-14 16:49:46,965 | INFO     | monitor loop #224: job 0:6969418818 is in state 'finished'
[2026-01-14 11:50:22] 2026-01-14 16:49:46,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:50:22] 2026-01-14 16:49:48,705 | INFO     | time since job start (2931s) is within the limit (349056.0s)
[2026-01-14 11:50:22] 2026-01-14 16:49:49,468 | INFO     | monitor loop #225: job 0:6969418818 is in state 'finished'
[2026-01-14 11:50:22] 2026-01-14 16:49:49,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:50:22] 2026-01-14 16:49:49,900 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 11:50:22] 2026-01-14 16:49:49,903 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-14 11:50:22] 2026-01-14 16:49:49,906 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969418818/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 11:50:22] 2026-01-14 16:49:49,907 | INFO     | extracted standard info from prmon json
[2026-01-14 11:50:22] 2026-01-14 16:49:49,907 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 11:50:22] 2026-01-14 16:49:49,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 11:50:22] 2026-01-14 16:49:49,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 11:50:22] 2026-01-14 16:49:49,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 11:50:22] 2026-01-14 16:49:49,910 | INFO     | fitting pss+swap vs Time
[2026-01-14 11:50:22] 2026-01-14 16:49:49,910 | INFO     | sum of square deviations: 21358540.0
[2026-01-14 11:50:22] 2026-01-14 16:49:49,910 | INFO     | sum of deviations: -2842466227.0000005
[2026-01-14 11:50:22] 2026-01-14 16:49:49,910 | INFO     | mean x: 1768408012.0
[2026-01-14 11:50:22] 2026-01-14 16:49:49,911 | INFO     | mean y: 2806393.073170732
[2026-01-14 11:50:22] 2026-01-14 16:49:49,911 | INFO     | intersect: 235348483095.04868
[2026-01-14 11:50:22] 2026-01-14 16:49:49,911 | INFO     | chi2: 0.03498904418584644
[2026-01-14 11:50:22] 2026-01-14 16:49:49,911 | INFO     | current memory leak: -133.08 B/s (using 41 data points, chi2=0.03)
[2026-01-14 11:50:22] 2026-01-14 16:49:49,911 | INFO     | could have reported an average CPU frequency of 1895 MHz (5 samples)
[2026-01-14 11:50:22] 2026-01-14 16:49:49,911 | INFO     | ..............................
[2026-01-14 11:50:22] 2026-01-14 16:49:49,912 | INFO     | . Timing measurements:
[2026-01-14 11:50:22] 2026-01-14 16:49:49,912 | INFO     | . get job = 0 s
[2026-01-14 11:50:22] 2026-01-14 16:49:49,912 | INFO     | . initial setup = 2 s
[2026-01-14 11:50:22] 2026-01-14 16:49:49,912 | INFO     | . payload setup = 7 s
[2026-01-14 11:50:22] 2026-01-14 16:49:49,912 | INFO     | . stage-in = 0 s
[2026-01-14 11:50:22] 2026-01-14 16:49:49,912 | INFO     | . payload execution = 2897 s
[2026-01-14 11:50:22] 2026-01-14 16:49:49,912 | INFO     | . stage-out = 0 s
[2026-01-14 11:50:22] 2026-01-14 16:49:49,912 | INFO     | . log creation = 0 s
[2026-01-14 11:50:22] 2026-01-14 16:49:49,912 | INFO     | ..............................
[2026-01-14 11:50:22] 2026-01-14 16:49:49,994 | INFO     | 
[2026-01-14 11:50:22] 2026-01-14 16:49:49,994 | INFO     | job summary report
[2026-01-14 11:50:22] 2026-01-14 16:49:49,994 | INFO     | --------------------------------------------------
[2026-01-14 11:50:22] 2026-01-14 16:49:49,994 | INFO     | PanDA job id: 6969418818
[2026-01-14 11:50:22] 2026-01-14 16:49:49,994 | INFO     | task id: 48215263
[2026-01-14 11:50:22] 2026-01-14 16:49:49,995 | INFO     | errors: (none)
[2026-01-14 11:50:22] 2026-01-14 16:49:49,995 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 11:50:22] 2026-01-14 16:49:49,995 | INFO     | pilot state: finished 
[2026-01-14 11:50:22] 2026-01-14 16:49:49,995 | INFO     | transexitcode: 0
[2026-01-14 11:50:22] 2026-01-14 16:49:49,995 | INFO     | exeerrorcode: 0
[2026-01-14 11:50:22] 2026-01-14 16:49:49,995 | INFO     | exeerrordiag: 
[2026-01-14 11:50:22] 2026-01-14 16:49:49,996 | INFO     | exitcode: 0
[2026-01-14 11:50:22] 2026-01-14 16:49:49,996 | INFO     | exitmsg: OK
[2026-01-14 11:50:22] 2026-01-14 16:49:49,996 | INFO     | cpuconsumptiontime: 30445 s
[2026-01-14 11:50:22] 2026-01-14 16:49:49,996 | INFO     | nevents: 400
[2026-01-14 11:50:22] 2026-01-14 16:49:49,996 | INFO     | neventsw: 0
[2026-01-14 11:50:22] 2026-01-14 16:49:49,996 | INFO     | pid: 18821
[2026-01-14 11:50:22] 2026-01-14 16:49:49,997 | INFO     | pgrp: 18821
[2026-01-14 11:50:22] 2026-01-14 16:49:49,997 | INFO     | corecount: 12
[2026-01-14 11:50:22] 2026-01-14 16:49:49,997 | INFO     | event service: False
[2026-01-14 11:50:22] 2026-01-14 16:49:49,997 | INFO     | sizes: {0: 2283778, 1: 2283977, 5: 2284239, 11: 2284295, 2908: 2309592, 2909: 2318774, 2916: 2318944}
[2026-01-14 11:50:22] 2026-01-14 16:49:49,997 | INFO     | --------------------------------------------------
[2026-01-14 11:50:22] 2026-01-14 16:49:49,997 | INFO     | 
[2026-01-14 11:50:22] 2026-01-14 16:49:49,997 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 11:50:22] 2026-01-14 16:49:50,020 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,020 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,020 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,021 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,021 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,021 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,023 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 11:50:22] 2026-01-14 16:49:50,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,023 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 11:50:22] 2026-01-14 16:49:50,024 | INFO     | job 6969418818 has completed (purged errors)
[2026-01-14 11:50:22] 2026-01-14 16:49:50,024 | INFO     | overall cleanup function is called
[2026-01-14 11:50:22] 2026-01-14 16:49:51,032 | INFO     | --- collectZombieJob: --- 10, [18821]
[2026-01-14 11:50:22] 2026-01-14 16:49:51,032 | INFO     | zombie collector waiting for pid 18821
[2026-01-14 11:50:22] 2026-01-14 16:49:51,032 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 11:50:22] 2026-01-14 16:49:51,033 | INFO     | collected zombie processes
[2026-01-14 11:50:22] 2026-01-14 16:49:51,033 | INFO     | will attempt to kill all subprocesses of pid=18821
[2026-01-14 11:50:22] 2026-01-14 16:49:51,124 | INFO     | process IDs to be killed: [18821] (in reverse order)
[2026-01-14 11:50:22] 2026-01-14 16:49:51,175 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 11:50:22] 2026-01-14 16:49:51,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 11:50:22] 2026-01-14 16:49:51,179 | INFO     | did not find any defunct processes belonging to 18821
[2026-01-14 11:50:22] 2026-01-14 16:49:51,182 | INFO     | did not find any defunct processes belonging to 18821
[2026-01-14 11:50:22] 2026-01-14 16:49:51,182 | INFO     | ready for new job
[2026-01-14 11:50:22] 2026-01-14 16:49:51,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 11:50:22] 2026-01-14 16:49:51,183 | INFO     | ***************************************
[2026-01-14 11:50:22] 2026-01-14 16:49:51,183 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 11:50:22] 2026-01-14 16:49:51,183 | INFO     | ***************************************
[2026-01-14 11:50:22] 2026-01-14 16:49:51,183 | INFO     | 
[2026-01-14 11:50:22] 2026-01-14 16:49:51,184 | INFO     | architecture information:
[2026-01-14 11:50:22] 2026-01-14 16:49:51,184 | INFO     | executing command: cat /etc/os-release
[2026-01-14 11:50:22] 2026-01-14 16:49:51,198 | INFO     | cat /etc/os-release:
[2026-01-14 11:50:22] NAME="CentOS Linux"
[2026-01-14 11:50:22] VERSION="7 (Core)"
[2026-01-14 11:50:22] ID="centos"
[2026-01-14 11:50:22] ID_LIKE="rhel fedora"
[2026-01-14 11:50:22] VERSION_ID="7"
[2026-01-14 11:50:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 11:50:22] ANSI_COLOR="0;31"
[2026-01-14 11:50:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 11:50:22] HOME_URL="https://www.centos.org/"
[2026-01-14 11:50:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 11:50:22] 
[2026-01-14 11:50:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 11:50:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 11:50:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 11:50:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 11:50:22] 
[2026-01-14 11:50:22] 2026-01-14 16:49:51,198 | INFO     | ***************************************
[2026-01-14 11:50:22] 2026-01-14 16:49:51,701 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 11:50:22] 2026-01-14 16:49:51,717 | INFO     | sufficient remaining disk space (28615639040 B)
[2026-01-14 11:50:22] 2026-01-14 16:49:51,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 11:50:22] 2026-01-14 16:49:51,717 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 11:50:22] 2026-01-14 16:49:51,718 | INFO     | update_server=False
[2026-01-14 11:50:22] 2026-01-14 16:49:51,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 11:50:22] 2026-01-14 16:49:51,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:50:22] 2026-01-14 16:49:51,718 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 11:50:22] 2026-01-14 16:49:51,795 | INFO     | all data control threads have been joined
[2026-01-14 11:50:22] 2026-01-14 16:49:51,901 | INFO     | all job control threads have been joined
[2026-01-14 11:50:22] 2026-01-14 16:49:51,971 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-14 11:50:22] 2026-01-14 16:49:51,971 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-14 11:50:22] 2026-01-14 16:49:51,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:50:22] 2026-01-14 16:49:51,972 | INFO     | will abort loop
[2026-01-14 11:50:22] 2026-01-14 16:49:52,088 | INFO     | all payload control threads have been joined
[2026-01-14 11:50:22] 2026-01-14 16:49:52,723 | INFO     | [job] retrieve thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:52,723 | INFO     | [job] queue monitor thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:52,801 | INFO     | [data] control thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:52,812 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:52,825 | INFO     | [payload] validate_post thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:52,906 | INFO     | [job] control thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:52,977 | INFO     | [job] job monitor thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:53,094 | INFO     | [payload] control thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:53,406 | INFO     | [data] copytool_in thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:53,557 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:53,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 11:50:22] 2026-01-14 16:49:53,724 | INFO     | [data] copytool_out thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:53,856 | INFO     | [payload] failed_post thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:54,145 | INFO     | [job] validate thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:54,160 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:49:57,593 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:50:01,804 | INFO     | job.realtimelogging is not enabled
[2026-01-14 11:50:22] 2026-01-14 16:50:02,004 | INFO     | [monitor] cgroup control has ended
[2026-01-14 11:50:22] 2026-01-14 16:50:02,810 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 11:50:22] 2026-01-14 16:50:03,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747723503424)>', '<ExcThread(monitor, started 139747146061568)>']
[2026-01-14 11:50:22] 2026-01-14 16:50:08,011 | INFO     | all workflow threads have been joined
[2026-01-14 11:50:22] 2026-01-14 16:50:08,011 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 11:50:22] 2026-01-14 16:50:08,011 | INFO     | traces error code: 0
[2026-01-14 11:50:22] 2026-01-14 16:50:08,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 11:50:22] 2026-01-14 16:50:21,907 | INFO     | PID=12404 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 11:50:22] 2026-01-14 16:50:21,907 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 11:50:22] 2026-01-14 16:50:21,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 11:50:22] 2026-01-14 16:50:21,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 11:50:22] 2026-01-14 16:50:21,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 11:50:22] 2026-01-14 16:50:21,908 | INFO     | [monitor] control thread has ended
[2026-01-14 11:50:22] 2026-01-14 16:50:21,989 [wrapper] ==== pilot stdout END ====
[2026-01-14 11:50:22] 2026-01-14 16:50:21,992 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 11:50:22] 2026-01-14 16:50:21,995 [wrapper] pilotpid: 12404
[2026-01-14 11:50:22] 2026-01-14 16:50:21,999 [wrapper] Pilot exit status: 0
[2026-01-14 11:50:22] 2026-01-14 16:50:22,014 [wrapper] pandaids: 6969418818
[2026-01-14 11:50:22] 2026-01-14 16:50:22,054 [wrapper] cleanup supervisor_pilot  5263 12405
[2026-01-14 11:50:22] 2026-01-14 16:50:22,058 [wrapper] Test setup, not cleaning
[2026-01-14 11:50:22] 2026-01-14 16:50:22,062 [wrapper] apfmon messages muted
[2026-01-14 11:50:22] 2026-01-14 16:50:22,066 [wrapper] ==== wrapper stdout END ====
[2026-01-14 11:50:22] 2026-01-14 16:50:22,070 [wrapper] ==== wrapper stderr END ====
[2026-01-14 11:50:22]  *** Error codes and diagnostics ***
[2026-01-14 11:50:22]     "exeErrorCode": 0,
[2026-01-14 11:50:22]     "exeErrorDiag": "",
[2026-01-14 11:50:22]     "pilotErrorCode": 0,
[2026-01-14 11:50:22]     "pilotErrorDiag": "",
[2026-01-14 11:50:22]  *** Listing of results directory ***
[2026-01-14 11:50:22] total 747188
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 04:29 pilot3.tar.gz
[2026-01-14 11:50:22] -rwx------ 1 boincer umatlas     36322 Jan 14 04:36 runpilot2-wrapper.sh
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 04:40 queuedata.json
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas       100 Jan 14 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 11:50:22] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 11:00 run_atlas
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas       105 Jan 14 11:00 job.xml
[2026-01-14 11:50:22] -rw-r--r-- 2 boincer umatlas 603155915 Jan 14 11:00 EVNT.32794306._000768.pool.root.1
[2026-01-14 11:50:22] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 11:00 start_atlas.sh
[2026-01-14 11:50:22] drwxrwx--x 2 boincer umatlas      4096 Jan 14 11:00 shared
[2026-01-14 11:50:22] -rw-r--r-- 2 boincer umatlas    592404 Jan 14 11:00 input.tar.gz
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas         0 Jan 14 11:00 boinc_lockfile
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas      2507 Jan 14 11:00 pandaJob.out
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas        57 Jan 14 11:00 setup.sh.local
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas    997956 Jan 14 11:00 agis_schedconf.cvmfs.json
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas   1516246 Jan 14 11:00 agis_ddmendpoints.agis.ALL.json
[2026-01-14 11:50:22] drwx------ 5 boincer umatlas      4096 Jan 14 11:00 pilot3
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas      5952 Jan 14 11:45 init_data.xml
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas 156446062 Jan 14 11:49 HITS.48215263._019164.pool.root.1
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas       531 Jan 14 11:49 boinc_task_state.xml
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas        95 Jan 14 11:49 pilot_heartbeat.json
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas      1044 Jan 14 11:49 memory_monitor_summary.json
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas    357702 Jan 14 11:49 log.48215263._019164.job.log.tgz.1
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas      7844 Jan 14 11:49 heartbeat.json
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 11:50 boinc_mmap_file
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas        27 Jan 14 11:50 wrapper_checkpoint.txt
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas       745 Jan 14 11:50 pilotlog.txt
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas    445184 Jan 14 11:50 log.48215263._019164.job.log.1
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas       357 Jan 14 11:50 output.list
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas       620 Jan 14 11:50 runtime_log
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas    819200 Jan 14 11:50 result.tar.gz
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas      9344 Jan 14 11:50 runtime_log.err
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas       659 Jan 14 11:50 6rhMDmXTC08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGwqKDmAyPUDn.diag
[2026-01-14 11:50:22] -rw-r--r-- 1 boincer umatlas     21854 Jan 14 11:50 stderr.txt
[2026-01-14 11:50:22] HITS file was successfully produced:
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas 156446062 Jan 14 11:49 shared/HITS.pool.root.1
[2026-01-14 11:50:22]  *** Contents of shared directory: ***
[2026-01-14 11:50:22] total 743200
[2026-01-14 11:50:22] -rw-r--r-- 2 boincer umatlas 603155915 Jan 14 11:00 ATLAS.root_0
[2026-01-14 11:50:22] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 11:00 start_atlas.sh
[2026-01-14 11:50:22] -rw-r--r-- 2 boincer umatlas    592404 Jan 14 11:00 input.tar.gz
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas 156446062 Jan 14 11:49 HITS.pool.root.1
[2026-01-14 11:50:22] -rw------- 1 boincer umatlas    819200 Jan 14 11:50 result.tar.gz
11:50:24 (8342): run_atlas exited; CPU time 30426.382025
11:50:24 (8342): called boinc_finish(0)

</stderr_txt>
]]>

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