Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:31:20 (25589): wrapper (7.7.26015): starting
19:31:20 (25589): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 19:31:20] Arguments: --nthreads 8
[2026-01-14 19:31:20] Threads: 8
[2026-01-14 19:31:20] Checking for CVMFS
[2026-01-14 19:31:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 19:31:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 19:31:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 19:31:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 19:31:23] 2.11.2.0 2467 42977 127256 155140 0 60 24263048 25165824 96 130560 0 19462590 99.815 12205489 2921 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 19:31:23] CVMFS is ok
[2026-01-14 19:31:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 19:31:23] Checking for apptainer binary...
[2026-01-14 19:31:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 19:31:23] Running /usr/bin/apptainer --version
[2026-01-14 19:31:23] apptainer version 1.3.2-1.el7
[2026-01-14 19:31:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 19:31:34] cg-vwn487.simple-grid.lan
[2026-01-14 19:31:34] apptainer works
[2026-01-14 19:31:34] Set ATHENA_PROC_NUMBER=8
[2026-01-14 19:31:34] Set ATHENA_CORE_NUMBER=8
[2026-01-14 19:31:34] Starting ATLAS job with PandaID=6969403949
[2026-01-14 19:31:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 21:51:56]  *** The last 200 lines of the pilot log: ***
[2026-01-14 21:51:56] 2026-01-14 20:51:00,918 | INFO     | chi2: 7.635969800649242
[2026-01-14 21:51:56] 2026-01-14 20:51:00,918 | INFO     | current chi2=7.635969800649242 (change=-0.4939070794945648 %)
[2026-01-14 21:51:56] 2026-01-14 20:51:00,918 | INFO     | right removable region: 119
[2026-01-14 21:51:56] 2026-01-14 20:51:00,918 | INFO     | sum of square deviations: 535786790.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,919 | INFO     | sum of deviations: 21660050708.5
[2026-01-14 21:51:56] 2026-01-14 20:51:00,919 | INFO     | mean x: 1768420188.5
[2026-01-14 21:51:56] 2026-01-14 20:51:00,919 | INFO     | mean y: 2477751.625
[2026-01-14 21:51:56] 2026-01-14 20:51:00,920 | INFO     | intersect: -71488778979.14496
[2026-01-14 21:51:56] 2026-01-14 20:51:00,920 | INFO     | chi2: 2.306902117507607
[2026-01-14 21:51:56] 2026-01-14 20:51:00,920 | INFO     | current chi2=2.306902117507607 (change=69.6397951942414 %)
[2026-01-14 21:51:56] 2026-01-14 20:51:00,920 | INFO     | sum of square deviations: 471562330.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,921 | INFO     | sum of deviations: -5460961438.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,921 | INFO     | mean x: 1768420341.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,921 | INFO     | mean y: 2541698.2
[2026-01-14 21:51:56] 2026-01-14 20:51:00,921 | INFO     | intersect: 20481860494.457138
[2026-01-14 21:51:56] 2026-01-14 20:51:00,922 | INFO     | chi2: 0.12427427009696236
[2026-01-14 21:51:56] 2026-01-14 20:51:00,922 | INFO     | current chi2=0.12427427009696236 (change=94.61293701393672 %)
[2026-01-14 21:51:56] 2026-01-14 20:51:00,922 | INFO     | sum of square deviations: 412686807.5
[2026-01-14 21:51:56] 2026-01-14 20:51:00,923 | INFO     | sum of deviations: -5883849214.499999
[2026-01-14 21:51:56] 2026-01-14 20:51:00,923 | INFO     | mean x: 1768420493.5
[2026-01-14 21:51:56] 2026-01-14 20:51:00,923 | INFO     | mean y: 2542536.881818182
[2026-01-14 21:51:56] 2026-01-14 20:51:00,923 | INFO     | intersect: 25215656555.763256
[2026-01-14 21:51:56] 2026-01-14 20:51:00,923 | INFO     | chi2: 0.07342391932928448
[2026-01-14 21:51:56] 2026-01-14 20:51:00,923 | INFO     | current chi2=0.07342391932928448 (change=40.9178430321924 %)
[2026-01-14 21:51:56] 2026-01-14 20:51:00,924 | INFO     | sum of square deviations: 358927660.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,924 | INFO     | sum of deviations: -1974972295.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,924 | INFO     | mean x: 1768420646.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,925 | INFO     | mean y: 2531430.8285714285
[2026-01-14 21:51:56] 2026-01-14 20:51:00,925 | INFO     | intersect: 9733132248.152048
[2026-01-14 21:51:56] 2026-01-14 20:51:00,925 | INFO     | chi2: 0.04252156203336644
[2026-01-14 21:51:56] 2026-01-14 20:51:00,925 | INFO     | current chi2=0.04252156203336644 (change=42.087588865053824 %)
[2026-01-14 21:51:56] 2026-01-14 20:51:00,925 | INFO     | sum of square deviations: 310052325.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,926 | INFO     | sum of deviations: 1261911148.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,926 | INFO     | mean x: 1768420798.5
[2026-01-14 21:51:56] 2026-01-14 20:51:00,926 | INFO     | mean y: 2521431.12
[2026-01-14 21:51:56] 2026-01-14 20:51:00,926 | INFO     | intersect: -7194940868.129688
[2026-01-14 21:51:56] 2026-01-14 20:51:00,927 | INFO     | chi2: 0.0004721949619573131
[2026-01-14 21:51:56] 2026-01-14 20:51:00,927 | INFO     | current chi2=0.0004721949619573131 (change=98.88951642560359 %)
[2026-01-14 21:51:56] 2026-01-14 20:51:00,927 | INFO     | sum of square deviations: 265828240.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,927 | INFO     | sum of deviations: 943288628.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,928 | INFO     | mean x: 1768420951.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,928 | INFO     | mean y: 2522527.957894737
[2026-01-14 21:51:56] 2026-01-14 20:51:00,928 | INFO     | intersect: -6272700046.570851
[2026-01-14 21:51:56] 2026-01-14 20:51:00,928 | INFO     | chi2: 0.0003897122637020062
[2026-01-14 21:51:56] 2026-01-14 20:51:00,928 | INFO     | current chi2=0.0003897122637020062 (change=17.46793271859674 %)
[2026-01-14 21:51:56] 2026-01-14 20:51:00,928 | INFO     | left removable region: 60
[2026-01-14 21:51:56] 2026-01-14 20:51:00,929 | INFO     | sum of square deviations: 63666310.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,929 | INFO     | sum of deviations: 146792656.99999997
[2026-01-14 21:51:56] 2026-01-14 20:51:00,929 | INFO     | mean x: 1768421683.0
[2026-01-14 21:51:56] 2026-01-14 20:51:00,929 | INFO     | mean y: 2523689.5762711866
[2026-01-14 21:51:56] 2026-01-14 20:51:00,929 | INFO     | intersect: -4074849689.5936804
[2026-01-14 21:51:56] 2026-01-14 20:51:00,929 | INFO     | chi2: 0.0001408908825712729
[2026-01-14 21:51:56] 2026-01-14 20:51:00,930 | INFO     | current memory leak: 2.31 B/s (using 59 data points, chi2=0.00)
[2026-01-14 21:51:56] 2026-01-14 20:51:00,930 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-14 21:51:56] 2026-01-14 20:51:00,930 | INFO     | ..............................
[2026-01-14 21:51:56] 2026-01-14 20:51:00,930 | INFO     | . Timing measurements:
[2026-01-14 21:51:56] 2026-01-14 20:51:00,931 | INFO     | . get job = 0 s
[2026-01-14 21:51:56] 2026-01-14 20:51:00,931 | INFO     | . initial setup = 3 s
[2026-01-14 21:51:56] 2026-01-14 20:51:00,931 | INFO     | . payload setup = 144 s
[2026-01-14 21:51:56] 2026-01-14 20:51:00,931 | INFO     | . stage-in = 0 s
[2026-01-14 21:51:56] 2026-01-14 20:51:00,931 | INFO     | . payload execution = 7758 s
[2026-01-14 21:51:56] 2026-01-14 20:51:00,931 | INFO     | . stage-out = 0 s
[2026-01-14 21:51:56] 2026-01-14 20:51:00,931 | INFO     | . log creation = 0 s
[2026-01-14 21:51:56] 2026-01-14 20:51:00,931 | INFO     | ..............................
[2026-01-14 21:51:56] 2026-01-14 20:51:01,039 | INFO     | 
[2026-01-14 21:51:56] 2026-01-14 20:51:01,039 | INFO     | job summary report
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | --------------------------------------------------
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | PanDA job id: 6969403949
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | task id: 48215263
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | errors: (none)
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | pilot state: finished 
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | transexitcode: 0
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | exeerrorcode: 0
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | exeerrordiag: 
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | exitcode: 0
[2026-01-14 21:51:56] 2026-01-14 20:51:01,040 | INFO     | exitmsg: OK
[2026-01-14 21:51:56] 2026-01-14 20:51:01,041 | INFO     | cpuconsumptiontime: 32472 s
[2026-01-14 21:51:56] 2026-01-14 20:51:01,041 | INFO     | nevents: 400
[2026-01-14 21:51:56] 2026-01-14 20:51:01,041 | INFO     | neventsw: 0
[2026-01-14 21:51:56] 2026-01-14 20:51:01,041 | INFO     | pid: 3430
[2026-01-14 21:51:56] 2026-01-14 20:51:01,041 | INFO     | pgrp: 3430
[2026-01-14 21:51:56] 2026-01-14 20:51:01,041 | INFO     | corecount: 8
[2026-01-14 21:51:56] 2026-01-14 20:51:01,041 | INFO     | event service: False
[2026-01-14 21:51:56] 2026-01-14 20:51:01,041 | INFO     | sizes: {0: 2283120, 1: 2283805, 2: 2284004, 13: 2284004, 23: 2284060, 34: 2284088, 45: 2284244, 55: 2284272, 66: 2284300, 77: 2284328, 88: 2284384, 98: 2284692, 10
[2026-01-14 21:51:56] 2026-01-14 20:51:01,041 | INFO     | --------------------------------------------------
[2026-01-14 21:51:56] 2026-01-14 20:51:01,042 | INFO     | 
[2026-01-14 21:51:56] 2026-01-14 20:51:01,042 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-14 21:51:56] 2026-01-14 20:51:01,068 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,068 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,069 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,069 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,070 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 21:51:56] 2026-01-14 20:51:01,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,070 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 21:51:56] 2026-01-14 20:51:01,071 | INFO     | job 6969403949 has completed (purged errors)
[2026-01-14 21:51:56] 2026-01-14 20:51:01,071 | INFO     | overall cleanup function is called
[2026-01-14 21:51:56] 2026-01-14 20:51:02,079 | INFO     | --- collectZombieJob: --- 10, [3430]
[2026-01-14 21:51:56] 2026-01-14 20:51:02,079 | INFO     | zombie collector waiting for pid 3430
[2026-01-14 21:51:56] 2026-01-14 20:51:02,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 21:51:56] 2026-01-14 20:51:02,079 | INFO     | collected zombie processes
[2026-01-14 21:51:56] 2026-01-14 20:51:02,080 | INFO     | will attempt to kill all subprocesses of pid=3430
[2026-01-14 21:51:56] 2026-01-14 20:51:02,149 | INFO     | process IDs to be killed: [3430] (in reverse order)
[2026-01-14 21:51:56] 2026-01-14 20:51:02,201 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 21:51:56] 2026-01-14 20:51:02,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 21:51:56] 2026-01-14 20:51:02,204 | INFO     | did not find any defunct processes belonging to 3430
[2026-01-14 21:51:56] 2026-01-14 20:51:02,206 | INFO     | did not find any defunct processes belonging to 3430
[2026-01-14 21:51:56] 2026-01-14 20:51:02,206 | INFO     | ready for new job
[2026-01-14 21:51:56] 2026-01-14 20:51:02,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 21:51:56] 2026-01-14 20:51:02,208 | INFO     | ***************************************
[2026-01-14 21:51:56] 2026-01-14 20:51:02,208 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 21:51:56] 2026-01-14 20:51:02,208 | INFO     | ***************************************
[2026-01-14 21:51:56] 2026-01-14 20:51:02,208 | INFO     | 
[2026-01-14 21:51:56] 2026-01-14 20:51:02,209 | INFO     | pilot is running in a VM
[2026-01-14 21:51:56] 2026-01-14 20:51:02,209 | INFO     | architecture information:
[2026-01-14 21:51:56] 2026-01-14 20:51:02,209 | INFO     | executing command: cat /etc/os-release
[2026-01-14 21:51:56] 2026-01-14 20:51:02,232 | INFO     | cat /etc/os-release:
[2026-01-14 21:51:56] NAME="CentOS Linux"
[2026-01-14 21:51:56] VERSION="7 (Core)"
[2026-01-14 21:51:56] ID="centos"
[2026-01-14 21:51:56] ID_LIKE="rhel fedora"
[2026-01-14 21:51:56] VERSION_ID="7"
[2026-01-14 21:51:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 21:51:56] ANSI_COLOR="0;31"
[2026-01-14 21:51:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 21:51:56] HOME_URL="https://www.centos.org/"
[2026-01-14 21:51:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 21:51:56] 
[2026-01-14 21:51:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 21:51:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 21:51:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 21:51:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 21:51:56] 
[2026-01-14 21:51:56] 2026-01-14 20:51:02,233 | INFO     | ***************************************
[2026-01-14 21:51:56] 2026-01-14 20:51:02,736 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-14 21:51:56] 2026-01-14 20:51:02,754 | INFO     | sufficient remaining disk space (496643342336 B)
[2026-01-14 21:51:56] 2026-01-14 20:51:02,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 21:51:56] 2026-01-14 20:51:02,755 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 21:51:56] 2026-01-14 20:51:02,755 | INFO     | update_server=False
[2026-01-14 21:51:56] 2026-01-14 20:51:02,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 21:51:56] 2026-01-14 20:51:02,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 21:51:56] 2026-01-14 20:51:02,756 | INFO     | aborting loop
[2026-01-14 21:51:56] 2026-01-14 20:51:02,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 21:51:56] 2026-01-14 20:51:02,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 21:51:56] 2026-01-14 20:51:02,787 | INFO     | all job control threads have been joined
[2026-01-14 21:51:56] 2026-01-14 20:51:02,989 | INFO     | all payload control threads have been joined
[2026-01-14 21:51:56] 2026-01-14 20:51:03,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 21:51:56] 2026-01-14 20:51:03,761 | INFO     | [job] retrieve thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:03,762 | INFO     | [job] queue monitor thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:03,762 | INFO     | [job] job monitor thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:03,764 | INFO     | all data control threads have been joined
[2026-01-14 21:51:56] 2026-01-14 20:51:03,793 | INFO     | [job] control thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:03,808 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:03,909 | INFO     | [payload] failed_post thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:03,995 | INFO     | [payload] control thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:04,207 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:04,317 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:04,766 | INFO     | [data] copytool_in thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:04,770 | INFO     | [data] control thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:04,815 | INFO     | [payload] validate_post thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:04,982 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:05,153 | INFO     | [job] validate thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:05,409 | INFO     | [data] copytool_out thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:06,760 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 21:51:56] 2026-01-14 20:51:32,804 | INFO     | PID=29316 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 21:51:56] 2026-01-14 20:51:32,804 | INFO     | .. there are 2 such processes running
[2026-01-14 21:51:56] 2026-01-14 20:51:32,804 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 21:51:56] 2026-01-14 20:51:32,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 21:51:56] 2026-01-14 20:51:32,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 21:51:56] 2026-01-14 20:51:50,402 | INFO     | [monitor] cgroup control has ended
[2026-01-14 21:51:56] 2026-01-14 20:51:51,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140609653151552)>', '<ExcThread(monitor, started 140609209743104)>']
[2026-01-14 21:51:56] 2026-01-14 20:51:51,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 21:51:56] 2026-01-14 20:51:51,897 | INFO     | [monitor] control thread has ended
[2026-01-14 21:51:56] 2026-01-14 20:51:56,541 | INFO     | all workflow threads have been joined
[2026-01-14 21:51:56] 2026-01-14 20:51:56,541 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 21:51:56] 2026-01-14 20:51:56,541 | INFO     | traces error code: 0
[2026-01-14 21:51:56] 2026-01-14 20:51:56,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 21:51:56] 2026-01-14 20:51:56,673 [wrapper] ==== pilot stdout END ====
[2026-01-14 21:51:56] 2026-01-14 20:51:56,676 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 21:51:56] 2026-01-14 20:51:56,680 [wrapper] pilotpid: 29316
[2026-01-14 21:51:56] 2026-01-14 20:51:56,683 [wrapper] Pilot exit status: 0
[2026-01-14 21:51:56] 2026-01-14 20:51:56,705 [wrapper] pandaids: 6969403949
[2026-01-14 21:51:56] 2026-01-14 20:51:56,741 [wrapper] cleanup supervisor_pilot  2204 29317
[2026-01-14 21:51:56] 2026-01-14 20:51:56,745 [wrapper] Test setup, not cleaning
[2026-01-14 21:51:56] 2026-01-14 20:51:56,756 [wrapper] apfmon messages muted
[2026-01-14 21:51:56] 2026-01-14 20:51:56,764 [wrapper] ==== wrapper stdout END ====
[2026-01-14 21:51:56] 2026-01-14 20:51:56,772 [wrapper] ==== wrapper stderr END ====
[2026-01-14 21:51:56]  *** Error codes and diagnostics ***
[2026-01-14 21:51:56]     "exeErrorCode": 0,
[2026-01-14 21:51:56]     "exeErrorDiag": "",
[2026-01-14 21:51:56]     "pilotErrorCode": 0,
[2026-01-14 21:51:56]     "pilotErrorDiag": "",
[2026-01-14 21:51:56]  *** Listing of results directory ***
[2026-01-14 21:51:56] total 733844
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc    579449 Jan 14 08:33 pilot3.tar.gz
[2026-01-14 21:51:56] -rwx------. 1 boinc boinc     36322 Jan 14 08:34 runpilot2-wrapper.sh
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc      5112 Jan 14 08:37 queuedata.json
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc       100 Jan 14 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 21:51:56] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 19:31 run_atlas
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc       105 Jan 14 19:31 job.xml
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc      6390 Jan 14 19:31 init_data.xml
[2026-01-14 21:51:56] -rw-r--r--. 2 boinc boinc 596897550 Jan 14 19:31 EVNT.32794306._000733.pool.root.1
[2026-01-14 21:51:56] -rw-r--r--. 2 boinc boinc     15847 Jan 14 19:31 start_atlas.sh
[2026-01-14 21:51:56] drwxrwx--x. 2 boinc boinc        68 Jan 14 19:31 shared
[2026-01-14 21:51:56] -rw-r--r--. 2 boinc boinc    592401 Jan 14 19:31 input.tar.gz
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc         0 Jan 14 19:31 boinc_lockfile
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc      2506 Jan 14 19:31 pandaJob.out
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc    998064 Jan 14 19:35 agis_schedconf.cvmfs.json
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc   1516246 Jan 14 19:35 agis_ddmendpoints.agis.ALL.json
[2026-01-14 21:51:56] drwx------. 5 boinc boinc      4096 Jan 14 19:35 pilot3
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc 147702132 Jan 14 21:50 HITS.48215263._018293.pool.root.1
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc       531 Jan 14 21:50 boinc_task_state.xml
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc      1021 Jan 14 21:50 memory_monitor_summary.json
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc    375979 Jan 14 21:50 log.48215263._018293.job.log.tgz.1
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc        95 Jan 14 21:50 pilot_heartbeat.json
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc      7781 Jan 14 21:51 heartbeat.json
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc      8192 Jan 14 21:51 boinc_mmap_file
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc        27 Jan 14 21:51 wrapper_checkpoint.txt
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc      4884 Jan 14 21:51 pilotlog.txt
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc   1098439 Jan 14 21:51 log.48215263._018293.job.log.1
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc       357 Jan 14 21:51 output.list
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc       620 Jan 14 21:51 runtime_log
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc   1495040 Jan 14 21:51 result.tar.gz
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc       652 Jan 14 21:51 ziZMDmoZA08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYeqKDm9ShFgn.diag
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc      8816 Jan 14 21:51 runtime_log.err
[2026-01-14 21:51:56] -rw-r--r--. 1 boinc boinc     20614 Jan 14 21:51 stderr.txt
[2026-01-14 21:51:56] HITS file was successfully produced:
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc 147702132 Jan 14 21:50 shared/HITS.pool.root.1
[2026-01-14 21:51:56]  *** Contents of shared directory: ***
[2026-01-14 21:51:56] total 729208
[2026-01-14 21:51:56] -rw-r--r--. 2 boinc boinc 596897550 Jan 14 19:31 ATLAS.root_0
[2026-01-14 21:51:56] -rw-r--r--. 2 boinc boinc     15847 Jan 14 19:31 start_atlas.sh
[2026-01-14 21:51:56] -rw-r--r--. 2 boinc boinc    592401 Jan 14 19:31 input.tar.gz
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc 147702132 Jan 14 21:50 HITS.pool.root.1
[2026-01-14 21:51:56] -rw-------. 1 boinc boinc   1495040 Jan 14 21:51 result.tar.gz
21:51:58 (25589): run_atlas exited; CPU time 32544.468785
21:51:58 (25589): called boinc_finish(0)

</stderr_txt>
]]>

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