Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:12 (3987797): wrapper (7.7.26015): starting
10:01:12 (3987797): wrapper: running run_atlas (--nthreads 11)
[2026-01-14 10:01:12] Arguments: --nthreads 11
[2026-01-14 10:01:12] Threads: 11
[2026-01-14 10:01:12] Checking for CVMFS
[2026-01-14 10:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 10:01:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 10:01:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 10:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 10:01:13] 2.13.3.0 12161 100763 346284 155134 0 307 29872366 40960000 14407 16776704 0 270352623 99.546 321463777 37790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 10:01:13] CVMFS is ok
[2026-01-14 10:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 10:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 10:01:13] Further information can be found at the LHC@home message board.
[2026-01-14 10:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 10:01:13] Checking for apptainer binary...
[2026-01-14 10:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 10:01:13] Running /usr/bin/apptainer --version
[2026-01-14 10:01:13] apptainer version 1.4.5-2.el9
[2026-01-14 10:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 10:01:13] c6-5-7-1.aglt2.org
[2026-01-14 10:01:13] apptainer works
[2026-01-14 10:01:13] Set ATHENA_PROC_NUMBER=11
[2026-01-14 10:01:13] Set ATHENA_CORE_NUMBER=11
[2026-01-14 10:01:13] Starting ATLAS job with PandaID=6969362064
[2026-01-14 10:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 11:13:02]  *** The last 200 lines of the pilot log: ***
[2026-01-14 11:13:02] 2026-01-14 16:12:08,605 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969362064/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 11:13:02] 2026-01-14 16:12:09,403 | INFO     | PID=3991462 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-14 11:13:02] 2026-01-14 16:12:09,404 | INFO     | .. there are 16 such processes running
[2026-01-14 11:13:02] 2026-01-14 16:12:09,466 | INFO     | number of running child processes to parent process 3998388: 1
[2026-01-14 11:13:02] 2026-01-14 16:12:09,466 | INFO     | maximum number of monitored processes: 6
[2026-01-14 11:13:02] 2026-01-14 16:12:09,776 | INFO     | job 6969362064 has state=finished
[2026-01-14 11:13:02] 2026-01-14 16:12:09,776 | INFO     | preparing for final server update for job 6969362064 in state='finished'
[2026-01-14 11:13:02] 2026-01-14 16:12:09,777 | INFO     | this job has now completed (state=finished)
[2026-01-14 11:13:02] 2026-01-14 16:12:09,777 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 11:13:02] 2026-01-14 16:12:09,777 | INFO     | log transfer has been attempted: DONE
[2026-01-14 11:13:02] 2026-01-14 16:12:09,777 | INFO     | job 6969362064 has finished - writing final server update
[2026-01-14 11:13:02] 2026-01-14 16:12:09,777 | INFO     | total number of processed events: 400 (read)
[2026-01-14 11:13:02] 2026-01-14 16:12:09,781 | INFO     | executing command: lscpu
[2026-01-14 11:13:02] 2026-01-14 16:12:09,892 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 11:13:02] 2026-01-14 16:12:10,410 | INFO     | time since job start (4241s) is within the limit (349056.0s)
[2026-01-14 11:13:02] 2026-01-14 16:12:11,972 | INFO     | monitor loop #289: job 0:6969362064 is in state 'finished'
[2026-01-14 11:13:02] 2026-01-14 16:12:11,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:13:02] 2026-01-14 16:12:12,420 | INFO     | time since job start (4243s) is within the limit (349056.0s)
[2026-01-14 11:13:02] 2026-01-14 16:12:14,426 | INFO     | time since job start (4245s) is within the limit (349056.0s)
[2026-01-14 11:13:02] 2026-01-14 16:12:14,479 | INFO     | monitor loop #290: job 0:6969362064 is in state 'finished'
[2026-01-14 11:13:02] 2026-01-14 16:12:14,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:13:02] 2026-01-14 16:12:16,433 | INFO     | time since job start (4247s) is within the limit (349056.0s)
[2026-01-14 11:13:02] 2026-01-14 16:12:16,983 | INFO     | monitor loop #291: job 0:6969362064 is in state 'finished'
[2026-01-14 11:13:02] 2026-01-14 16:12:16,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:13:02] 2026-01-14 16:12:18,441 | INFO     | time since job start (4249s) is within the limit (349056.0s)
[2026-01-14 11:13:02] 2026-01-14 16:12:19,488 | INFO     | monitor loop #292: job 0:6969362064 is in state 'finished'
[2026-01-14 11:13:02] 2026-01-14 16:12:19,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:13:02] 2026-01-14 16:12:20,452 | INFO     | time since job start (4251s) is within the limit (349056.0s)
[2026-01-14 11:13:02] 2026-01-14 16:12:22,007 | INFO     | monitor loop #293: job 0:6969362064 is in state 'finished'
[2026-01-14 11:13:02] 2026-01-14 16:12:22,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:13:02] 2026-01-14 16:12:22,467 | INFO     | time since job start (4253s) is within the limit (349056.0s)
[2026-01-14 11:13:02] 2026-01-14 16:12:24,474 | INFO     | time since job start (4255s) is within the limit (349056.0s)
[2026-01-14 11:13:02] 2026-01-14 16:12:24,525 | INFO     | monitor loop #294: job 0:6969362064 is in state 'finished'
[2026-01-14 11:13:02] 2026-01-14 16:12:24,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:13:02] 2026-01-14 16:12:26,481 | INFO     | time since job start (4257s) is within the limit (349056.0s)
[2026-01-14 11:13:02] 2026-01-14 16:12:27,034 | INFO     | monitor loop #295: job 0:6969362064 is in state 'finished'
[2026-01-14 11:13:02] 2026-01-14 16:12:27,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:13:02] 2026-01-14 16:12:27,200 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 11:13:02] 2026-01-14 16:12:27,207 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3054.2618750000006
[2026-01-14 11:13:02] 2026-01-14 16:12:27,215 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969362064/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 11:13:02] 2026-01-14 16:12:27,216 | INFO     | extracted standard info from prmon json
[2026-01-14 11:13:02] 2026-01-14 16:12:27,216 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 11:13:02] 2026-01-14 16:12:27,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 11:13:02] 2026-01-14 16:12:27,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 11:13:02] 2026-01-14 16:12:27,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 11:13:02] 2026-01-14 16:12:27,218 | INFO     | fitting pss+swap vs Time
[2026-01-14 11:13:02] 2026-01-14 16:12:27,219 | INFO     | sum of square deviations: 73881709.24193564
[2026-01-14 11:13:02] 2026-01-14 16:12:27,219 | INFO     | sum of deviations: 488761147.9193549
[2026-01-14 11:13:02] 2026-01-14 16:12:27,219 | INFO     | mean x: 1768405085.564516
[2026-01-14 11:13:02] 2026-01-14 16:12:27,219 | INFO     | mean y: 2668868.14516129
[2026-01-14 11:13:02] 2026-01-14 16:12:27,219 | INFO     | intersect: -11696135998.111792
[2026-01-14 11:13:02] 2026-01-14 16:12:27,219 | INFO     | chi2: 0.0009286339174532503
[2026-01-14 11:13:02] 2026-01-14 16:12:27,219 | INFO     | current memory leak: 6.62 B/s (using 62 data points, chi2=0.00)
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | could have reported an average CPU frequency of 3041 MHz (6 samples)
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | ..............................
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | . Timing measurements:
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | . get job = 0 s
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | . initial setup = 2 s
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | . payload setup = 8 s
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | . stage-in = 0 s
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | . payload execution = 4206 s
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | . stage-out = 2 s
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | . log creation = 0 s
[2026-01-14 11:13:02] 2026-01-14 16:12:27,220 | INFO     | ..............................
[2026-01-14 11:13:02] 2026-01-14 16:12:27,578 | INFO     | 
[2026-01-14 11:13:02] 2026-01-14 16:12:27,578 | INFO     | job summary report
[2026-01-14 11:13:02] 2026-01-14 16:12:27,578 | INFO     | --------------------------------------------------
[2026-01-14 11:13:02] 2026-01-14 16:12:27,578 | INFO     | PanDA job id: 6969362064
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | task id: 48215263
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | errors: (none)
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | pilot state: finished 
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | transexitcode: 0
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | exeerrorcode: 0
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | exeerrordiag: 
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | exitcode: 0
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | exitmsg: OK
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | cpuconsumptiontime: 23147 s
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | nevents: 400
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | neventsw: 0
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | pid: 3998388
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | pgrp: 3998388
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | corecount: 11
[2026-01-14 11:13:02] 2026-01-14 16:12:27,579 | INFO     | event service: False
[2026-01-14 11:13:02] 2026-01-14 16:12:27,580 | INFO     | sizes: {0: 2283722, 1: 2283977, 7: 2284239, 12: 2284267, 4218: 2310311, 4221: 2319309, 4222: 2319493, 4241: 2319687}
[2026-01-14 11:13:02] 2026-01-14 16:12:27,580 | INFO     | --------------------------------------------------
[2026-01-14 11:13:02] 2026-01-14 16:12:27,580 | INFO     | 
[2026-01-14 11:13:02] 2026-01-14 16:12:27,580 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 11:13:02] 2026-01-14 16:12:27,653 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,654 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,654 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,654 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,656 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 11:13:02] 2026-01-14 16:12:27,657 | INFO     | job 6969362064 has completed (purged errors)
[2026-01-14 11:13:02] 2026-01-14 16:12:27,657 | INFO     | overall cleanup function is called
[2026-01-14 11:13:02] 2026-01-14 16:12:28,673 | INFO     | --- collectZombieJob: --- 10, [3998388]
[2026-01-14 11:13:02] 2026-01-14 16:12:28,673 | INFO     | zombie collector waiting for pid 3998388
[2026-01-14 11:13:02] 2026-01-14 16:12:28,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 11:13:02] 2026-01-14 16:12:28,673 | INFO     | collected zombie processes
[2026-01-14 11:13:02] 2026-01-14 16:12:28,673 | INFO     | will attempt to kill all subprocesses of pid=3998388
[2026-01-14 11:13:02] 2026-01-14 16:12:29,155 | INFO     | process IDs to be killed: [3998388] (in reverse order)
[2026-01-14 11:13:02] 2026-01-14 16:12:29,272 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 11:13:02] 2026-01-14 16:12:29,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 11:13:02] 2026-01-14 16:12:29,285 | INFO     | did not find any defunct processes belonging to 3998388
[2026-01-14 11:13:02] 2026-01-14 16:12:29,298 | INFO     | did not find any defunct processes belonging to 3998388
[2026-01-14 11:13:02] 2026-01-14 16:12:29,298 | INFO     | ready for new job
[2026-01-14 11:13:02] 2026-01-14 16:12:29,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 11:13:02] 2026-01-14 16:12:29,300 | INFO     | ***************************************
[2026-01-14 11:13:02] 2026-01-14 16:12:29,301 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 11:13:02] 2026-01-14 16:12:29,301 | INFO     | ***************************************
[2026-01-14 11:13:02] 2026-01-14 16:12:29,301 | INFO     | 
[2026-01-14 11:13:02] 2026-01-14 16:12:29,307 | INFO     | architecture information:
[2026-01-14 11:13:02] 2026-01-14 16:12:29,319 | INFO     | executing command: cat /etc/os-release
[2026-01-14 11:13:02] 2026-01-14 16:12:29,395 | INFO     | cat /etc/os-release:
[2026-01-14 11:13:02] NAME="CentOS Linux"
[2026-01-14 11:13:02] VERSION="7 (Core)"
[2026-01-14 11:13:02] ID="centos"
[2026-01-14 11:13:02] ID_LIKE="rhel fedora"
[2026-01-14 11:13:02] VERSION_ID="7"
[2026-01-14 11:13:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 11:13:02] ANSI_COLOR="0;31"
[2026-01-14 11:13:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 11:13:02] HOME_URL="https://www.centos.org/"
[2026-01-14 11:13:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 11:13:02] 
[2026-01-14 11:13:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 11:13:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 11:13:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 11:13:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 11:13:02] 
[2026-01-14 11:13:02] 2026-01-14 16:12:29,396 | INFO     | ***************************************
[2026-01-14 11:13:02] 2026-01-14 16:12:29,899 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 11:13:02] 2026-01-14 16:12:29,933 | INFO     | sufficient remaining disk space (72197603328 B)
[2026-01-14 11:13:02] 2026-01-14 16:12:29,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 11:13:02] 2026-01-14 16:12:29,933 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 11:13:02] 2026-01-14 16:12:29,933 | INFO     | update_server=False
[2026-01-14 11:13:02] 2026-01-14 16:12:29,933 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 11:13:02] 2026-01-14 16:12:30,013 | INFO     | all data control threads have been joined
[2026-01-14 11:13:02] 2026-01-14 16:12:30,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:13:02] 2026-01-14 16:12:30,545 | INFO     | aborting loop
[2026-01-14 11:13:02] 2026-01-14 16:12:30,610 | INFO     | all payload control threads have been joined
[2026-01-14 11:13:02] 2026-01-14 16:12:30,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 11:13:02] 2026-01-14 16:12:30,732 | INFO     | all job control threads have been joined
[2026-01-14 11:13:02] 2026-01-14 16:12:30,943 | INFO     | [job] retrieve thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:31,021 | INFO     | [data] control thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:31,043 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:31,217 | INFO     | [payload] validate_post thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:31,479 | INFO     | [payload] failed_post thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:31,551 | INFO     | [job] job monitor thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:31,616 | INFO     | [payload] control thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:31,690 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:31,738 | INFO     | [job] control thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:31,876 | INFO     | [job] validate thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:32,028 | INFO     | [data] copytool_in thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:32,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 11:13:02] 2026-01-14 16:12:32,339 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:32,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:13:02] 2026-01-14 16:12:32,679 | INFO     | [data] copytool_out thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:33,381 | INFO     | [job] queue monitor thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:36,201 | INFO     | [monitor] cgroup control has ended
[2026-01-14 11:13:02] 2026-01-14 16:12:36,242 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:40,046 | INFO     | job.realtimelogging is not enabled
[2026-01-14 11:13:02] 2026-01-14 16:12:41,052 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 11:13:02] 2026-01-14 16:12:42,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140542574716736)>', '<ExcThread(monitor, started 140541857621760)>']
[2026-01-14 11:13:02] 2026-01-14 16:12:47,516 | INFO     | all workflow threads have been joined
[2026-01-14 11:13:02] 2026-01-14 16:12:47,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 11:13:02] 2026-01-14 16:12:47,517 | INFO     | traces error code: 0
[2026-01-14 11:13:02] 2026-01-14 16:12:47,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 11:13:02] 2026-01-14 16:13:00,557 | INFO     | PID=3991462 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 11:13:02] 2026-01-14 16:13:00,557 | INFO     | .. there are 16 such processes running
[2026-01-14 11:13:02] 2026-01-14 16:13:00,558 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 11:13:02] 2026-01-14 16:13:00,558 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 11:13:02] 2026-01-14 16:13:00,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 11:13:02] 2026-01-14 16:13:00,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 11:13:02] 2026-01-14 16:13:00,558 | INFO     | [monitor] control thread has ended
[2026-01-14 11:13:02] 2026-01-14 16:13:01,777 [wrapper] ==== pilot stdout END ====
[2026-01-14 11:13:02] 2026-01-14 16:13:01,823 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 11:13:02] 2026-01-14 16:13:01,831 [wrapper] pilotpid: 3991462
[2026-01-14 11:13:02] 2026-01-14 16:13:01,835 [wrapper] Pilot exit status: 0
[2026-01-14 11:13:02] 2026-01-14 16:13:01,926 [wrapper] pandaids: 6969362064
[2026-01-14 11:13:02] 2026-01-14 16:13:02,000 [wrapper] cleanup supervisor_pilot    7091 3991463
[2026-01-14 11:13:02] 2026-01-14 16:13:02,010 [wrapper] Test setup, not cleaning
[2026-01-14 11:13:02] 2026-01-14 16:13:02,015 [wrapper] apfmon messages muted
[2026-01-14 11:13:02] 2026-01-14 16:13:02,026 [wrapper] ==== wrapper stdout END ====
[2026-01-14 11:13:02] 2026-01-14 16:13:02,033 [wrapper] ==== wrapper stderr END ====
[2026-01-14 11:13:02]  *** Error codes and diagnostics ***
[2026-01-14 11:13:02]     "exeErrorCode": 0,
[2026-01-14 11:13:02]     "exeErrorDiag": "",
[2026-01-14 11:13:02]     "pilotErrorCode": 0,
[2026-01-14 11:13:02]     "pilotErrorDiag": "",
[2026-01-14 11:13:02]  *** Listing of results directory ***
[2026-01-14 11:13:02] total 725128
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 02:33 pilot3.tar.gz
[2026-01-14 11:13:02] -rwx------. 1 boincer umatlas     36322 Jan 14 02:36 runpilot2-wrapper.sh
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 02:37 queuedata.json
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas       100 Jan 14 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 11:13:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 10:01 run_atlas
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas       105 Jan 14 10:01 job.xml
[2026-01-14 11:13:02] -rw-r--r--. 2 boincer umatlas 594520946 Jan 14 10:01 EVNT.32794306._000671.pool.root.1
[2026-01-14 11:13:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 10:01 start_atlas.sh
[2026-01-14 11:13:02] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 10:01 shared
[2026-01-14 11:13:02] -rw-r--r--. 2 boincer umatlas    592398 Jan 14 10:01 input.tar.gz
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas         0 Jan 14 10:01 boinc_lockfile
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas      2507 Jan 14 10:01 pandaJob.out
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas        57 Jan 14 10:01 setup.sh.local
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas    997566 Jan 14 10:01 agis_schedconf.cvmfs.json
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas   1516246 Jan 14 10:01 agis_ddmendpoints.agis.ALL.json
[2026-01-14 11:13:02] drwx------. 5 boincer umatlas      4096 Jan 14 10:01 pilot3
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas      6842 Jan 14 11:10 init_data.xml
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas 142131689 Jan 14 11:11 HITS.48215263._016760.pool.root.1
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas       531 Jan 14 11:11 boinc_task_state.xml
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas      1039 Jan 14 11:12 memory_monitor_summary.json
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas    360692 Jan 14 11:12 log.48215263._016760.job.log.tgz.1
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas      7813 Jan 14 11:12 heartbeat.json
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 11:12 boinc_mmap_file
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas        27 Jan 14 11:13 wrapper_checkpoint.txt
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas        95 Jan 14 11:13 pilot_heartbeat.json
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas       823 Jan 14 11:13 pilotlog.txt
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas    617919 Jan 14 11:13 log.48215263._016760.job.log.1
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas       357 Jan 14 11:13 output.list
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas       620 Jan 14 11:13 runtime_log
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas    993280 Jan 14 11:13 result.tar.gz
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas      9344 Jan 14 11:13 runtime_log.err
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas       652 Jan 14 11:13 3yGKDmWbA08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMRkKDmd3RzLm.diag
[2026-01-14 11:13:02] -rw-r--r--. 1 boincer umatlas     22337 Jan 14 11:13 stderr.txt
[2026-01-14 11:13:02] HITS file was successfully produced:
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas 142131689 Jan 14 11:11 shared/HITS.pool.root.1
[2026-01-14 11:13:02]  *** Contents of shared directory: ***
[2026-01-14 11:13:02] total 720968
[2026-01-14 11:13:02] -rw-r--r--. 2 boincer umatlas 594520946 Jan 14 10:01 ATLAS.root_0
[2026-01-14 11:13:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 10:01 start_atlas.sh
[2026-01-14 11:13:02] -rw-r--r--. 2 boincer umatlas    592398 Jan 14 10:01 input.tar.gz
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas 142131689 Jan 14 11:11 HITS.pool.root.1
[2026-01-14 11:13:02] -rw-------. 1 boincer umatlas    993280 Jan 14 11:13 result.tar.gz
11:13:04 (3987797): run_atlas exited; CPU time 23189.895697
11:13:04 (3987797): called boinc_finish(0)

</stderr_txt>
]]>

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