Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:31:31 (3875365): wrapper (7.7.26015): starting
09:31:31 (3875365): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 09:31:31] Arguments: --nthreads 8
[2026-01-14 09:31:31] Threads: 8
[2026-01-14 09:31:31] Checking for CVMFS
[2026-01-14 09:31:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 09:31:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 09:31:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 09:31:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 09:31:34] 2.13.3.0 12161 100733 345704 155134 2 279 29775514 40960001 16139 16776704 0 270212416 99.545 321445926 37789 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 09:31:34] CVMFS is ok
[2026-01-14 09:31:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 09:31:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 09:31:34] Further information can be found at the LHC@home message board.
[2026-01-14 09:31:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 09:31:34] Checking for apptainer binary...
[2026-01-14 09:31:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 09:31:34] Running /usr/bin/apptainer --version
[2026-01-14 09:31:34] apptainer version 1.4.5-2.el9
[2026-01-14 09:31:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 09:31:34] c6-5-7-1.aglt2.org
[2026-01-14 09:31:34] apptainer works
[2026-01-14 09:31:34] Set ATHENA_PROC_NUMBER=8
[2026-01-14 09:31:34] Set ATHENA_CORE_NUMBER=8
[2026-01-14 09:31:34] Starting ATLAS job with PandaID=6969447534
[2026-01-14 09:31:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 10:59:41]  *** The last 200 lines of the pilot log: ***
[2026-01-14 10:59:41] 2026-01-14 15:58:37,367 | INFO     | executing command: lscpu
[2026-01-14 10:59:41] 2026-01-14 15:58:37,447 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 10:59:41] 2026-01-14 15:58:38,103 | INFO     | time since job start (5173s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:58:38,366 | INFO     | monitor loop #372: job 0:6969447534 is in state 'finished'
[2026-01-14 10:59:41] 2026-01-14 15:58:38,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:59:41] 2026-01-14 15:58:40,118 | INFO     | time since job start (5175s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:58:40,871 | INFO     | monitor loop #373: job 0:6969447534 is in state 'finished'
[2026-01-14 10:59:41] 2026-01-14 15:58:40,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:59:41] 2026-01-14 15:58:42,142 | INFO     | time since job start (5177s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:58:43,393 | INFO     | monitor loop #374: job 0:6969447534 is in state 'finished'
[2026-01-14 10:59:41] 2026-01-14 15:58:43,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:59:41] 2026-01-14 15:58:44,149 | INFO     | time since job start (5179s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:58:45,926 | INFO     | monitor loop #375: job 0:6969447534 is in state 'finished'
[2026-01-14 10:59:41] 2026-01-14 15:58:45,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:59:41] 2026-01-14 15:58:46,156 | INFO     | time since job start (5181s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:58:48,163 | INFO     | time since job start (5183s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:58:48,431 | INFO     | monitor loop #376: job 0:6969447534 is in state 'finished'
[2026-01-14 10:59:41] 2026-01-14 15:58:48,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:59:41] 2026-01-14 15:58:50,180 | INFO     | time since job start (5185s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:58:50,180 | INFO     | 5188s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-14 10:59:41] 2026-01-14 15:58:50,968 | INFO     | monitor loop #377: job 0:6969447534 is in state 'finished'
[2026-01-14 10:59:41] 2026-01-14 15:58:50,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:59:41] 2026-01-14 15:58:52,187 | INFO     | time since job start (5187s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:58:53,473 | INFO     | monitor loop #378: job 0:6969447534 is in state 'finished'
[2026-01-14 10:59:41] 2026-01-14 15:58:53,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:59:41] 2026-01-14 15:58:54,194 | INFO     | time since job start (5189s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:58:55,979 | INFO     | monitor loop #379: job 0:6969447534 is in state 'finished'
[2026-01-14 10:59:41] 2026-01-14 15:58:55,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:59:41] 2026-01-14 15:58:56,212 | INFO     | time since job start (5191s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:58:58,143 | INFO     | PID=3881598 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 10:59:41] 2026-01-14 15:58:58,144 | INFO     | .. there are 17 such processes running
[2026-01-14 10:59:41] 2026-01-14 15:58:58,486 | INFO     | monitor loop #380: job 0:6969447534 is in state 'finished'
[2026-01-14 10:59:41] 2026-01-14 15:58:58,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:59:41] 2026-01-14 15:58:59,144 | INFO     | time since job start (5194s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:59:01,006 | INFO     | monitor loop #381: job 0:6969447534 is in state 'finished'
[2026-01-14 10:59:41] 2026-01-14 15:59:01,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:59:41] 2026-01-14 15:59:01,172 | INFO     | time since job start (5196s) is within the limit (349056.0s)
[2026-01-14 10:59:41] 2026-01-14 15:59:01,821 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 10:59:41] 2026-01-14 15:59:01,838 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2963.7466964285713
[2026-01-14 10:59:41] 2026-01-14 15:59:01,961 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6969447534/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 10:59:41] 2026-01-14 15:59:01,962 | INFO     | extracted standard info from prmon json
[2026-01-14 10:59:41] 2026-01-14 15:59:01,962 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 10:59:41] 2026-01-14 15:59:01,962 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 10:59:41] 2026-01-14 15:59:01,963 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 10:59:41] 2026-01-14 15:59:01,963 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 10:59:41] 2026-01-14 15:59:01,965 | INFO     | fitting pss+swap vs Time
[2026-01-14 10:59:41] 2026-01-14 15:59:01,970 | INFO     | sum of square deviations: 136101676.94736847
[2026-01-14 10:59:41] 2026-01-14 15:59:01,971 | INFO     | sum of deviations: -6217895188.789474
[2026-01-14 10:59:41] 2026-01-14 15:59:01,971 | INFO     | mean x: 1768403855.5263157
[2026-01-14 10:59:41] 2026-01-14 15:59:01,971 | INFO     | mean y: 2630388.3947368423
[2026-01-14 10:59:41] 2026-01-14 15:59:01,971 | INFO     | intersect: 80793330927.41873
[2026-01-14 10:59:41] 2026-01-14 15:59:01,971 | INFO     | chi2: 0.05132474274446622
[2026-01-14 10:59:41] 2026-01-14 15:59:01,971 | INFO     | current memory leak: -45.69 B/s (using 76 data points, chi2=0.05)
[2026-01-14 10:59:41] 2026-01-14 15:59:01,972 | INFO     | could have reported an average CPU frequency of 3046 MHz (6 samples)
[2026-01-14 10:59:41] 2026-01-14 15:59:01,976 | INFO     | ..............................
[2026-01-14 10:59:41] 2026-01-14 15:59:01,976 | INFO     | . Timing measurements:
[2026-01-14 10:59:41] 2026-01-14 15:59:01,976 | INFO     | . get job = 0 s
[2026-01-14 10:59:41] 2026-01-14 15:59:01,976 | INFO     | . initial setup = 3 s
[2026-01-14 10:59:41] 2026-01-14 15:59:01,976 | INFO     | . payload setup = 33 s
[2026-01-14 10:59:41] 2026-01-14 15:59:01,977 | INFO     | . stage-in = 0 s
[2026-01-14 10:59:41] 2026-01-14 15:59:01,977 | INFO     | . payload execution = 5069 s
[2026-01-14 10:59:41] 2026-01-14 15:59:01,977 | INFO     | . stage-out = 2 s
[2026-01-14 10:59:41] 2026-01-14 15:59:01,977 | INFO     | . log creation = 0 s
[2026-01-14 10:59:41] 2026-01-14 15:59:01,977 | INFO     | ..............................
[2026-01-14 10:59:41] 2026-01-14 15:59:02,610 | INFO     | 
[2026-01-14 10:59:41] 2026-01-14 15:59:02,610 | INFO     | job summary report
[2026-01-14 10:59:41] 2026-01-14 15:59:02,610 | INFO     | --------------------------------------------------
[2026-01-14 10:59:41] 2026-01-14 15:59:02,610 | INFO     | PanDA job id: 6969447534
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | task id: 48215263
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | errors: (none)
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | pilot state: finished 
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | transexitcode: 0
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | exeerrorcode: 0
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | exeerrordiag: 
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | exitcode: 0
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | exitmsg: OK
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | cpuconsumptiontime: 24865 s
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | nevents: 400
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | neventsw: 0
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | pid: 3897549
[2026-01-14 10:59:41] 2026-01-14 15:59:02,611 | INFO     | pgrp: 3897549
[2026-01-14 10:59:41] 2026-01-14 15:59:02,612 | INFO     | corecount: 8
[2026-01-14 10:59:41] 2026-01-14 15:59:02,612 | INFO     | event service: False
[2026-01-14 10:59:41] 2026-01-14 15:59:02,612 | INFO     | sizes: {0: 2283779, 1: 2283978, 12: 2283978, 23: 2284006, 24: 2284296, 33: 2284324, 5107: 2310898, 5110: 2319896, 5113: 2319952, 5138: 2320146}
[2026-01-14 10:59:41] 2026-01-14 15:59:02,612 | INFO     | --------------------------------------------------
[2026-01-14 10:59:41] 2026-01-14 15:59:02,612 | INFO     | 
[2026-01-14 10:59:41] 2026-01-14 15:59:02,612 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-14 10:59:41] 2026-01-14 15:59:02,680 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,680 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,680 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,680 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,680 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,680 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,680 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 10:59:41] 2026-01-14 15:59:02,681 | INFO     | job 6969447534 has completed (purged errors)
[2026-01-14 10:59:41] 2026-01-14 15:59:02,682 | INFO     | overall cleanup function is called
[2026-01-14 10:59:41] 2026-01-14 15:59:03,694 | INFO     | --- collectZombieJob: --- 10, [3897549]
[2026-01-14 10:59:41] 2026-01-14 15:59:03,694 | INFO     | zombie collector waiting for pid 3897549
[2026-01-14 10:59:41] 2026-01-14 15:59:03,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 10:59:41] 2026-01-14 15:59:03,694 | INFO     | collected zombie processes
[2026-01-14 10:59:41] 2026-01-14 15:59:03,695 | INFO     | will attempt to kill all subprocesses of pid=3897549
[2026-01-14 10:59:41] 2026-01-14 15:59:04,484 | INFO     | process IDs to be killed: [3897549] (in reverse order)
[2026-01-14 10:59:41] 2026-01-14 15:59:04,626 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 10:59:41] 2026-01-14 15:59:04,627 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 10:59:41] 2026-01-14 15:59:04,648 | INFO     | did not find any defunct processes belonging to 3897549
[2026-01-14 10:59:41] 2026-01-14 15:59:04,673 | INFO     | did not find any defunct processes belonging to 3897549
[2026-01-14 10:59:41] 2026-01-14 15:59:04,673 | INFO     | ready for new job
[2026-01-14 10:59:41] 2026-01-14 15:59:04,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 10:59:41] 2026-01-14 15:59:04,679 | INFO     | ***************************************
[2026-01-14 10:59:41] 2026-01-14 15:59:04,680 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 10:59:41] 2026-01-14 15:59:04,680 | INFO     | ***************************************
[2026-01-14 10:59:41] 2026-01-14 15:59:04,680 | INFO     | 
[2026-01-14 10:59:41] 2026-01-14 15:59:04,687 | INFO     | architecture information:
[2026-01-14 10:59:41] 2026-01-14 15:59:04,695 | INFO     | executing command: cat /etc/os-release
[2026-01-14 10:59:41] 2026-01-14 15:59:04,748 | INFO     | cat /etc/os-release:
[2026-01-14 10:59:41] NAME="CentOS Linux"
[2026-01-14 10:59:41] VERSION="7 (Core)"
[2026-01-14 10:59:41] ID="centos"
[2026-01-14 10:59:41] ID_LIKE="rhel fedora"
[2026-01-14 10:59:41] VERSION_ID="7"
[2026-01-14 10:59:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 10:59:41] ANSI_COLOR="0;31"
[2026-01-14 10:59:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 10:59:41] HOME_URL="https://www.centos.org/"
[2026-01-14 10:59:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 10:59:41] 
[2026-01-14 10:59:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 10:59:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 10:59:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 10:59:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 10:59:41] 
[2026-01-14 10:59:41] 2026-01-14 15:59:04,749 | INFO     | ***************************************
[2026-01-14 10:59:41] 2026-01-14 15:59:05,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-14 10:59:41] 2026-01-14 15:59:05,323 | INFO     | sufficient remaining disk space (70935117824 B)
[2026-01-14 10:59:41] 2026-01-14 15:59:05,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 10:59:41] 2026-01-14 15:59:05,324 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 10:59:41] 2026-01-14 15:59:05,324 | INFO     | update_server=False
[2026-01-14 10:59:41] 2026-01-14 15:59:05,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 10:59:41] 2026-01-14 15:59:05,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:59:41] 2026-01-14 15:59:05,325 | INFO     | aborting loop
[2026-01-14 10:59:41] 2026-01-14 15:59:05,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 10:59:41] 2026-01-14 15:59:05,359 | INFO     | all payload control threads have been joined
[2026-01-14 10:59:41] 2026-01-14 15:59:05,407 | INFO     | all data control threads have been joined
[2026-01-14 10:59:41] 2026-01-14 15:59:05,863 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 10:59:41] 2026-01-14 15:59:06,330 | INFO     | [job] retrieve thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:06,331 | INFO     | [job] job monitor thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:06,365 | INFO     | [payload] control thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:06,413 | INFO     | [data] control thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:06,542 | INFO     | all job control threads have been joined
[2026-01-14 10:59:41] 2026-01-14 15:59:06,563 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:06,694 | INFO     | [payload] validate_post thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:06,795 | INFO     | [payload] failed_post thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:07,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:59:41] 2026-01-14 15:59:07,332 | INFO     | [data] copytool_out thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:07,448 | INFO     | [data] copytool_in thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:07,559 | INFO     | [job] control thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:07,623 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:07,631 | INFO     | [job] validate thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:07,730 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:08,205 | INFO     | [job] queue monitor thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:09,876 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:15,744 | INFO     | job.realtimelogging is not enabled
[2026-01-14 10:59:41] 2026-01-14 15:59:16,751 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 10:59:41] 2026-01-14 15:59:33,927 | INFO     | [monitor] cgroup control has ended
[2026-01-14 10:59:41] 2026-01-14 15:59:34,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140186741126976)>', '<ExcThread(monitor, started 140186113533696)>']
[2026-01-14 10:59:41] 2026-01-14 15:59:37,590 | INFO     | PID=3881598 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 10:59:41] 2026-01-14 15:59:37,591 | INFO     | .. there are 17 such processes running
[2026-01-14 10:59:41] 2026-01-14 15:59:37,595 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 10:59:41] 2026-01-14 15:59:37,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 10:59:41] 2026-01-14 15:59:37,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 10:59:41] 2026-01-14 15:59:37,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 10:59:41] 2026-01-14 15:59:37,595 | INFO     | [monitor] control thread has ended
[2026-01-14 10:59:41] 2026-01-14 15:59:39,459 | INFO     | all workflow threads have been joined
[2026-01-14 10:59:41] 2026-01-14 15:59:39,459 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 10:59:41] 2026-01-14 15:59:39,460 | INFO     | traces error code: 0
[2026-01-14 10:59:41] 2026-01-14 15:59:39,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 10:59:41] 2026-01-14 15:59:40,192 [wrapper] ==== pilot stdout END ====
[2026-01-14 10:59:41] 2026-01-14 15:59:40,207 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 10:59:41] 2026-01-14 15:59:40,222 [wrapper] pilotpid: 3881598
[2026-01-14 10:59:41] 2026-01-14 15:59:40,240 [wrapper] Pilot exit status: 0
[2026-01-14 10:59:41] 2026-01-14 15:59:40,302 [wrapper] pandaids: 6969447534
[2026-01-14 10:59:41] 2026-01-14 15:59:40,628 [wrapper] cleanup supervisor_pilot 4148558 3881599
[2026-01-14 10:59:41] 2026-01-14 15:59:40,648 [wrapper] Test setup, not cleaning
[2026-01-14 10:59:41] 2026-01-14 15:59:40,679 [wrapper] apfmon messages muted
[2026-01-14 10:59:41] 2026-01-14 15:59:40,705 [wrapper] ==== wrapper stdout END ====
[2026-01-14 10:59:41] 2026-01-14 15:59:40,709 [wrapper] ==== wrapper stderr END ====
[2026-01-14 10:59:41]  *** Error codes and diagnostics ***
[2026-01-14 10:59:41]     "exeErrorCode": 0,
[2026-01-14 10:59:41]     "exeErrorDiag": "",
[2026-01-14 10:59:41]     "pilotErrorCode": 0,
[2026-01-14 10:59:41]     "pilotErrorDiag": "",
[2026-01-14 10:59:41]  *** Listing of results directory ***
[2026-01-14 10:59:41] total 736724
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 06:27 pilot3.tar.gz
[2026-01-14 10:59:41] -rwx------. 1 boincer umatlas     36322 Jan 14 06:29 runpilot2-wrapper.sh
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 06:31 queuedata.json
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas       100 Jan 14 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 10:59:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 09:31 run_atlas
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas       105 Jan 14 09:31 job.xml
[2026-01-14 10:59:41] -rw-r--r--. 2 boincer umatlas 594042179 Jan 14 09:31 EVNT.32794306._000853.pool.root.1
[2026-01-14 10:59:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 09:31 start_atlas.sh
[2026-01-14 10:59:41] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 09:31 shared
[2026-01-14 10:59:41] -rw-r--r--. 2 boincer umatlas    592405 Jan 14 09:31 input.tar.gz
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas         0 Jan 14 09:31 boinc_lockfile
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas      2508 Jan 14 09:31 pandaJob.out
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas        57 Jan 14 09:31 setup.sh.local
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas    997566 Jan 14 09:32 agis_schedconf.cvmfs.json
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas   1516246 Jan 14 09:32 agis_ddmendpoints.agis.ALL.json
[2026-01-14 10:59:41] drwx------. 5 boincer umatlas      4096 Jan 14 09:32 pilot3
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas 154305359 Jan 14 10:57 HITS.48215263._021289.pool.root.1
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas       530 Jan 14 10:57 boinc_task_state.xml
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas      1037 Jan 14 10:58 memory_monitor_summary.json
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas    325151 Jan 14 10:58 log.48215263._021289.job.log.tgz.1
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas      6842 Jan 14 10:58 init_data.xml
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas      7817 Jan 14 10:59 heartbeat.json
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas        27 Jan 14 10:59 wrapper_checkpoint.txt
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 10:59 boinc_mmap_file
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas        95 Jan 14 10:59 pilot_heartbeat.json
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas      4896 Jan 14 10:59 pilotlog.txt
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas    739816 Jan 14 10:59 log.48215263._021289.job.log.1
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas       357 Jan 14 10:59 output.list
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas       620 Jan 14 10:59 runtime_log
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas   1085440 Jan 14 10:59 result.tar.gz
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas      9342 Jan 14 10:59 runtime_log.err
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas       652 Jan 14 10:59 mBrMDmXFE08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfvkKDmbsU2Om.diag
[2026-01-14 10:59:41] -rw-r--r--. 1 boincer umatlas     22464 Jan 14 10:59 stderr.txt
[2026-01-14 10:59:41] HITS file was successfully produced:
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas 154305359 Jan 14 10:57 shared/HITS.pool.root.1
[2026-01-14 10:59:41]  *** Contents of shared directory: ***
[2026-01-14 10:59:41] total 732476
[2026-01-14 10:59:41] -rw-r--r--. 2 boincer umatlas 594042179 Jan 14 09:31 ATLAS.root_0
[2026-01-14 10:59:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 09:31 start_atlas.sh
[2026-01-14 10:59:41] -rw-r--r--. 2 boincer umatlas    592405 Jan 14 09:31 input.tar.gz
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas 154305359 Jan 14 10:57 HITS.pool.root.1
[2026-01-14 10:59:41] -rw-------. 1 boincer umatlas   1085440 Jan 14 10:59 result.tar.gz
10:59:42 (3875365): run_atlas exited; CPU time 25008.554979
10:59:42 (3875365): called boinc_finish(0)

</stderr_txt>
]]>

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