Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:18:19 (14167): wrapper (7.7.26015): starting
09:18:19 (14167): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 09:18:19] Arguments: --nthreads 8
[2026-01-14 09:18:19] Threads: 8
[2026-01-14 09:18:19] Checking for CVMFS
[2026-01-14 09:18:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 09:18:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 09:18:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 09:18:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 09:18:19] 2.11.2.0 8318 188419 131684 155134 0 56 14068594 18432000 1833 130560 0 125447143 99.979 7442341 31686 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 09:18:19] CVMFS is ok
[2026-01-14 09:18:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 09:18:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 09:18:19] Further information can be found at the LHC@home message board.
[2026-01-14 09:18:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 09:18:19] Checking for apptainer binary...
[2026-01-14 09:18:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 09:18:19] Running /usr/bin/apptainer --version
[2026-01-14 09:18:20] apptainer version 1.3.2-1.el7
[2026-01-14 09:18:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 09:18:20] c-206-28.aglt2.org
[2026-01-14 09:18:20] apptainer works
[2026-01-14 09:18:20] Set ATHENA_PROC_NUMBER=8
[2026-01-14 09:18:20] Set ATHENA_CORE_NUMBER=8
[2026-01-14 09:18:20] Starting ATLAS job with PandaID=6969448112
[2026-01-14 09:18:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 11:06:57]  *** The last 200 lines of the pilot log: ***
[2026-01-14 11:06:57] 2026-01-14 16:06:20,551 | INFO     | executing command: lscpu
[2026-01-14 11:06:57] 2026-01-14 16:06:20,570 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 11:06:57] 2026-01-14 16:06:21,263 | INFO     | monitor loop #476: job 0:6969448112 is in state 'finished'
[2026-01-14 11:06:57] 2026-01-14 16:06:21,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:06:57] 2026-01-14 16:06:21,821 | INFO     | time since job start (6470s) is within the limit (349056.0s)
[2026-01-14 11:06:57] 2026-01-14 16:06:23,766 | INFO     | monitor loop #477: job 0:6969448112 is in state 'finished'
[2026-01-14 11:06:57] 2026-01-14 16:06:23,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:06:57] 2026-01-14 16:06:23,826 | INFO     | time since job start (6472s) is within the limit (349056.0s)
[2026-01-14 11:06:57] 2026-01-14 16:06:24,398 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 11:06:57] 2026-01-14 16:06:24,404 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2350.375
[2026-01-14 11:06:57] 2026-01-14 16:06:24,409 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969448112/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 11:06:57] 2026-01-14 16:06:24,410 | INFO     | extracted standard info from prmon json
[2026-01-14 11:06:57] 2026-01-14 16:06:24,410 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 11:06:57] 2026-01-14 16:06:24,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 11:06:57] 2026-01-14 16:06:24,411 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 11:06:57] 2026-01-14 16:06:24,411 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 11:06:57] 2026-01-14 16:06:24,415 | INFO     | fitting pss+swap vs Time
[2026-01-14 11:06:57] 2026-01-14 16:06:24,415 | INFO     | sum of square deviations: 369281342.5
[2026-01-14 11:06:57] 2026-01-14 16:06:24,416 | INFO     | sum of deviations: -2857901239.999998
[2026-01-14 11:06:57] 2026-01-14 16:06:24,416 | INFO     | mean x: 1768403539.5
[2026-01-14 11:06:57] 2026-01-14 16:06:24,416 | INFO     | mean y: 2581603.962264151
[2026-01-14 11:06:57] 2026-01-14 16:06:24,416 | INFO     | intersect: 13688414292.239594
[2026-01-14 11:06:57] 2026-01-14 16:06:24,417 | INFO     | chi2: 1.60150649458318
[2026-01-14 11:06:57] 2026-01-14 16:06:24,417 | INFO     | sum of square deviations: 319447850.0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,418 | INFO     | sum of deviations: -1866990705.0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,418 | INFO     | mean x: 1768403387.0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,418 | INFO     | mean y: 2584638.376237624
[2026-01-14 11:06:57] 2026-01-14 16:06:24,418 | INFO     | intersect: 10337895037.928207
[2026-01-14 11:06:57] 2026-01-14 16:06:24,419 | INFO     | chi2: 1.604312048739935
[2026-01-14 11:06:57] 2026-01-14 16:06:24,419 | INFO     | current chi2=1.604312048739935 (change=-0.1751821904091041 %)
[2026-01-14 11:06:57] 2026-01-14 16:06:24,419 | INFO     | right removable region: 100
[2026-01-14 11:06:57] 2026-01-14 16:06:24,419 | INFO     | sum of square deviations: 319447850.0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,420 | INFO     | sum of deviations: -19253481300.999996
[2026-01-14 11:06:57] 2026-01-14 16:06:24,420 | INFO     | mean x: 1768403692.0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,421 | INFO     | mean y: 2630752.673267327
[2026-01-14 11:06:57] 2026-01-14 16:06:24,421 | INFO     | intersect: 106586310738.44044
[2026-01-14 11:06:57] 2026-01-14 16:06:24,421 | INFO     | chi2: 0.10512432213268734
[2026-01-14 11:06:57] 2026-01-14 16:06:24,421 | INFO     | current chi2=0.10512432213268734 (change=93.43591034514988 %)
[2026-01-14 11:06:57] 2026-01-14 16:06:24,422 | INFO     | sum of square deviations: 274312120.0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,422 | INFO     | sum of deviations: -18699119522.999996
[2026-01-14 11:06:57] 2026-01-14 16:06:24,422 | INFO     | mean x: 1768403844.5
[2026-01-14 11:06:57] 2026-01-14 16:06:24,423 | INFO     | mean y: 2628728.7083333335
[2026-01-14 11:06:57] 2026-01-14 16:06:24,423 | INFO     | intersect: 120549963105.46936
[2026-01-14 11:06:57] 2026-01-14 16:06:24,423 | INFO     | chi2: 0.07954424967630906
[2026-01-14 11:06:57] 2026-01-14 16:06:24,423 | INFO     | current chi2=0.07954424967630906 (change=24.33316280897512 %)
[2026-01-14 11:06:57] 2026-01-14 16:06:24,424 | INFO     | left removable region: 20
[2026-01-14 11:06:57] 2026-01-14 16:06:24,424 | INFO     | sum of square deviations: 158737860.0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,424 | INFO     | sum of deviations: -12587402307.499998
[2026-01-14 11:06:57] 2026-01-14 16:06:24,425 | INFO     | mean x: 1768403966.5
[2026-01-14 11:06:57] 2026-01-14 16:06:24,425 | INFO     | mean y: 2616692.6125
[2026-01-14 11:06:57] 2026-01-14 16:06:24,425 | INFO     | intersect: 140231369735.61212
[2026-01-14 11:06:57] 2026-01-14 16:06:24,425 | INFO     | chi2: 0.07026743132256437
[2026-01-14 11:06:57] 2026-01-14 16:06:24,426 | INFO     | current memory leak: -79.30 B/s (using 80 data points, chi2=0.07)
[2026-01-14 11:06:57] 2026-01-14 16:06:24,426 | INFO     | could have reported an average CPU frequency of 2505 MHz (7 samples)
[2026-01-14 11:06:57] 2026-01-14 16:06:24,426 | INFO     | ..............................
[2026-01-14 11:06:57] 2026-01-14 16:06:24,426 | INFO     | . Timing measurements:
[2026-01-14 11:06:57] 2026-01-14 16:06:24,427 | INFO     | . get job = 0 s
[2026-01-14 11:06:57] 2026-01-14 16:06:24,427 | INFO     | . initial setup = 2 s
[2026-01-14 11:06:57] 2026-01-14 16:06:24,427 | INFO     | . payload setup = 4 s
[2026-01-14 11:06:57] 2026-01-14 16:06:24,427 | INFO     | . stage-in = 0 s
[2026-01-14 11:06:57] 2026-01-14 16:06:24,427 | INFO     | . payload execution = 6441 s
[2026-01-14 11:06:57] 2026-01-14 16:06:24,427 | INFO     | . stage-out = 0 s
[2026-01-14 11:06:57] 2026-01-14 16:06:24,428 | INFO     | . log creation = 0 s
[2026-01-14 11:06:57] 2026-01-14 16:06:24,428 | INFO     | ..............................
[2026-01-14 11:06:57] 2026-01-14 16:06:24,530 | INFO     | 
[2026-01-14 11:06:57] 2026-01-14 16:06:24,531 | INFO     | job summary report
[2026-01-14 11:06:57] 2026-01-14 16:06:24,531 | INFO     | --------------------------------------------------
[2026-01-14 11:06:57] 2026-01-14 16:06:24,531 | INFO     | PanDA job id: 6969448112
[2026-01-14 11:06:57] 2026-01-14 16:06:24,531 | INFO     | task id: 48215263
[2026-01-14 11:06:57] 2026-01-14 16:06:24,531 | INFO     | errors: (none)
[2026-01-14 11:06:57] 2026-01-14 16:06:24,531 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 11:06:57] 2026-01-14 16:06:24,531 | INFO     | pilot state: finished 
[2026-01-14 11:06:57] 2026-01-14 16:06:24,531 | INFO     | transexitcode: 0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,531 | INFO     | exeerrorcode: 0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,532 | INFO     | exeerrordiag: 
[2026-01-14 11:06:57] 2026-01-14 16:06:24,532 | INFO     | exitcode: 0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,532 | INFO     | exitmsg: OK
[2026-01-14 11:06:57] 2026-01-14 16:06:24,532 | INFO     | cpuconsumptiontime: 47824 s
[2026-01-14 11:06:57] 2026-01-14 16:06:24,532 | INFO     | nevents: 400
[2026-01-14 11:06:57] 2026-01-14 16:06:24,532 | INFO     | neventsw: 0
[2026-01-14 11:06:57] 2026-01-14 16:06:24,532 | INFO     | pid: 24316
[2026-01-14 11:06:57] 2026-01-14 16:06:24,532 | INFO     | pgrp: 24316
[2026-01-14 11:06:57] 2026-01-14 16:06:24,532 | INFO     | corecount: 8
[2026-01-14 11:06:57] 2026-01-14 16:06:24,532 | INFO     | event service: False
[2026-01-14 11:06:57] 2026-01-14 16:06:24,533 | INFO     | sizes: {0: 2283835, 1: 2283977, 4: 2284239, 12: 2284267, 6450: 2311469, 6451: 2320467, 6454: 2320651, 6458: 2320845}
[2026-01-14 11:06:57] 2026-01-14 16:06:24,533 | INFO     | --------------------------------------------------
[2026-01-14 11:06:57] 2026-01-14 16:06:24,533 | INFO     | 
[2026-01-14 11:06:57] 2026-01-14 16:06:24,533 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-14 11:06:57] 2026-01-14 16:06:24,552 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,553 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,553 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,553 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,554 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 11:06:57] 2026-01-14 16:06:24,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,555 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 11:06:57] 2026-01-14 16:06:24,555 | INFO     | job 6969448112 has completed (purged errors)
[2026-01-14 11:06:57] 2026-01-14 16:06:24,555 | INFO     | overall cleanup function is called
[2026-01-14 11:06:57] 2026-01-14 16:06:25,561 | INFO     | --- collectZombieJob: --- 10, [24316]
[2026-01-14 11:06:57] 2026-01-14 16:06:25,562 | INFO     | zombie collector waiting for pid 24316
[2026-01-14 11:06:57] 2026-01-14 16:06:25,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 11:06:57] 2026-01-14 16:06:25,562 | INFO     | collected zombie processes
[2026-01-14 11:06:57] 2026-01-14 16:06:25,562 | INFO     | will attempt to kill all subprocesses of pid=24316
[2026-01-14 11:06:57] 2026-01-14 16:06:25,726 | INFO     | process IDs to be killed: [24316] (in reverse order)
[2026-01-14 11:06:57] 2026-01-14 16:06:25,778 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 11:06:57] 2026-01-14 16:06:25,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 11:06:57] 2026-01-14 16:06:25,783 | INFO     | did not find any defunct processes belonging to 24316
[2026-01-14 11:06:57] 2026-01-14 16:06:25,788 | INFO     | did not find any defunct processes belonging to 24316
[2026-01-14 11:06:57] 2026-01-14 16:06:25,789 | INFO     | ready for new job
[2026-01-14 11:06:57] 2026-01-14 16:06:25,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 11:06:57] 2026-01-14 16:06:25,790 | INFO     | ***************************************
[2026-01-14 11:06:57] 2026-01-14 16:06:25,791 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 11:06:57] 2026-01-14 16:06:25,791 | INFO     | ***************************************
[2026-01-14 11:06:57] 2026-01-14 16:06:25,791 | INFO     | 
[2026-01-14 11:06:57] 2026-01-14 16:06:25,792 | INFO     | architecture information:
[2026-01-14 11:06:57] 2026-01-14 16:06:25,794 | INFO     | executing command: cat /etc/os-release
[2026-01-14 11:06:57] 2026-01-14 16:06:25,806 | INFO     | cat /etc/os-release:
[2026-01-14 11:06:57] NAME="CentOS Linux"
[2026-01-14 11:06:57] VERSION="7 (Core)"
[2026-01-14 11:06:57] ID="centos"
[2026-01-14 11:06:57] ID_LIKE="rhel fedora"
[2026-01-14 11:06:57] VERSION_ID="7"
[2026-01-14 11:06:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 11:06:57] ANSI_COLOR="0;31"
[2026-01-14 11:06:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 11:06:57] HOME_URL="https://www.centos.org/"
[2026-01-14 11:06:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 11:06:57] 
[2026-01-14 11:06:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 11:06:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 11:06:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 11:06:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 11:06:57] 
[2026-01-14 11:06:57] 2026-01-14 16:06:25,806 | INFO     | ***************************************
[2026-01-14 11:06:57] 2026-01-14 16:06:26,309 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-14 11:06:57] 2026-01-14 16:06:26,322 | INFO     | sufficient remaining disk space (25954353152 B)
[2026-01-14 11:06:57] 2026-01-14 16:06:26,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 11:06:57] 2026-01-14 16:06:26,323 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 11:06:57] 2026-01-14 16:06:26,323 | INFO     | update_server=False
[2026-01-14 11:06:57] 2026-01-14 16:06:26,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 11:06:57] 2026-01-14 16:06:26,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:06:57] 2026-01-14 16:06:26,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 11:06:57] 2026-01-14 16:06:26,363 | INFO     | all data control threads have been joined
[2026-01-14 11:06:57] 2026-01-14 16:06:26,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 11:06:57] 2026-01-14 16:06:26,658 | INFO     | all job control threads have been joined
[2026-01-14 11:06:57] 2026-01-14 16:06:27,046 | INFO     | all payload control threads have been joined
[2026-01-14 11:06:57] 2026-01-14 16:06:27,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:06:57] 2026-01-14 16:06:27,284 | INFO     | aborting loop
[2026-01-14 11:06:57] 2026-01-14 16:06:27,329 | INFO     | [job] retrieve thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:27,329 | INFO     | [job] queue monitor thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:27,369 | INFO     | [data] control thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:27,503 | INFO     | [payload] validate_post thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:27,664 | INFO     | [job] control thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:27,755 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:28,040 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:28,051 | INFO     | [payload] control thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:28,277 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:28,288 | INFO     | [job] job monitor thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:28,331 | INFO     | [data] copytool_out thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:28,503 | INFO     | [payload] failed_post thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:28,661 | INFO     | [job] validate thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:28,663 | INFO     | [data] copytool_in thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:30,564 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:37,150 | INFO     | job.realtimelogging is not enabled
[2026-01-14 11:06:57] 2026-01-14 16:06:38,155 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 11:06:57] 2026-01-14 16:06:41,169 | INFO     | [monitor] cgroup control has ended
[2026-01-14 11:06:57] 2026-01-14 16:06:41,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694041663296)>', '<ExcThread(monitor, started 139693467363072)>']
[2026-01-14 11:06:57] 2026-01-14 16:06:46,347 | INFO     | all workflow threads have been joined
[2026-01-14 11:06:57] 2026-01-14 16:06:46,347 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 11:06:57] 2026-01-14 16:06:46,347 | INFO     | traces error code: 0
[2026-01-14 11:06:57] 2026-01-14 16:06:46,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 11:06:57] 2026-01-14 16:06:57,010 | INFO     | PID=17920 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 11:06:57] 2026-01-14 16:06:57,010 | INFO     | .. there are 3 such processes running
[2026-01-14 11:06:57] 2026-01-14 16:06:57,011 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 11:06:57] 2026-01-14 16:06:57,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 11:06:57] 2026-01-14 16:06:57,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 11:06:57] 2026-01-14 16:06:57,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 11:06:57] 2026-01-14 16:06:57,011 | INFO     | [monitor] control thread has ended
[2026-01-14 11:06:57] 2026-01-14 16:06:57,121 [wrapper] ==== pilot stdout END ====
[2026-01-14 11:06:57] 2026-01-14 16:06:57,124 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 11:06:57] 2026-01-14 16:06:57,127 [wrapper] pilotpid: 17920
[2026-01-14 11:06:57] 2026-01-14 16:06:57,132 [wrapper] Pilot exit status: 0
[2026-01-14 11:06:57] 2026-01-14 16:06:57,142 [wrapper] pandaids: 6969448112
[2026-01-14 11:06:57] 2026-01-14 16:06:57,182 [wrapper] cleanup supervisor_pilot 14161 17921
[2026-01-14 11:06:57] 2026-01-14 16:06:57,184 [wrapper] Test setup, not cleaning
[2026-01-14 11:06:57] 2026-01-14 16:06:57,187 [wrapper] apfmon messages muted
[2026-01-14 11:06:57] 2026-01-14 16:06:57,189 [wrapper] ==== wrapper stdout END ====
[2026-01-14 11:06:57] 2026-01-14 16:06:57,191 [wrapper] ==== wrapper stderr END ====
[2026-01-14 11:06:57]  *** Error codes and diagnostics ***
[2026-01-14 11:06:57]     "exeErrorCode": 0,
[2026-01-14 11:06:57]     "exeErrorDiag": "",
[2026-01-14 11:06:57]     "pilotErrorCode": 0,
[2026-01-14 11:06:57]     "pilotErrorDiag": "",
[2026-01-14 11:06:57]  *** Listing of results directory ***
[2026-01-14 11:06:57] total 734928
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 06:27 pilot3.tar.gz
[2026-01-14 11:06:57] -rwx------ 1 boincer umatlas     36322 Jan 14 06:28 runpilot2-wrapper.sh
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 06:29 queuedata.json
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas       100 Jan 14 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 11:06:57] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 09:18 run_atlas
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas       105 Jan 14 09:18 job.xml
[2026-01-14 11:06:57] -rw-r--r-- 2 boincer umatlas 595566802 Jan 14 09:18 EVNT.32794306._000863.pool.root.1
[2026-01-14 11:06:57] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 09:18 start_atlas.sh
[2026-01-14 11:06:57] drwxrwx--x 2 boincer umatlas      4096 Jan 14 09:18 shared
[2026-01-14 11:06:57] -rw-r--r-- 2 boincer umatlas    592401 Jan 14 09:18 input.tar.gz
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas         0 Jan 14 09:18 boinc_lockfile
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas      2507 Jan 14 09:18 pandaJob.out
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas        57 Jan 14 09:18 setup.sh.local
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas    997566 Jan 14 09:18 agis_schedconf.cvmfs.json
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas   1516246 Jan 14 09:18 agis_ddmendpoints.agis.ALL.json
[2026-01-14 11:06:57] drwx------ 5 boincer umatlas      4096 Jan 14 09:18 pilot3
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas      5951 Jan 14 11:03 init_data.xml
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas 150473342 Jan 14 11:05 HITS.48215263._021552.pool.root.1
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas       530 Jan 14 11:05 boinc_task_state.xml
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas      1054 Jan 14 11:06 memory_monitor_summary.json
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas    364660 Jan 14 11:06 log.48215263._021552.job.log.tgz.1
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas      7859 Jan 14 11:06 heartbeat.json
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas        27 Jan 14 11:06 wrapper_checkpoint.txt
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 11:06 boinc_mmap_file
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas       820 Jan 14 11:06 pilotlog.txt
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas        95 Jan 14 11:06 pilot_heartbeat.json
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas    932080 Jan 14 11:06 log.48215263._021552.job.log.1
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas       357 Jan 14 11:06 output.list
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas       620 Jan 14 11:06 runtime_log
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas   1320960 Jan 14 11:06 result.tar.gz
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas      9342 Jan 14 11:06 runtime_log.err
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas       658 Jan 14 11:06 6ybLDmHEE08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmd5qKDmv9ZrJn.diag
[2026-01-14 11:06:57] -rw-r--r-- 1 boincer umatlas     21320 Jan 14 11:06 stderr.txt
[2026-01-14 11:06:57] HITS file was successfully produced:
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas 150473342 Jan 14 11:05 shared/HITS.pool.root.1
[2026-01-14 11:06:57]  *** Contents of shared directory: ***
[2026-01-14 11:06:57] total 730456
[2026-01-14 11:06:57] -rw-r--r-- 2 boincer umatlas 595566802 Jan 14 09:18 ATLAS.root_0
[2026-01-14 11:06:57] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 09:18 start_atlas.sh
[2026-01-14 11:06:57] -rw-r--r-- 2 boincer umatlas    592401 Jan 14 09:18 input.tar.gz
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas 150473342 Jan 14 11:05 HITS.pool.root.1
[2026-01-14 11:06:57] -rw------- 1 boincer umatlas   1320960 Jan 14 11:06 result.tar.gz
11:06:58 (14167): run_atlas exited; CPU time 47892.737736
11:06:58 (14167): called boinc_finish(0)

</stderr_txt>
]]>

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