Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:20:21 (31782): wrapper (7.7.26015): starting
09:20:21 (31782): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 09:20:21] Arguments: --nthreads 8
[2026-01-14 09:20:21] Threads: 8
[2026-01-14 09:20:21] Checking for CVMFS
[2026-01-14 09:20:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 09:20:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 09:20:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 09:20:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 09:20:21] 2.11.2.0 2756 143973 90744 155134 3 56 12251330 20275201 1 130560 0 39589342 99.867 8094650 35398 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 09:20:21] CVMFS is ok
[2026-01-14 09:20:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 09:20:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 09:20:21] Further information can be found at the LHC@home message board.
[2026-01-14 09:20:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 09:20:21] Checking for apptainer binary...
[2026-01-14 09:20:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 09:20:21] Running /usr/bin/apptainer --version
[2026-01-14 09:20:21] apptainer version 1.3.2-1.el7
[2026-01-14 09:20:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 09:20:23] c-115-14.aglt2.org
[2026-01-14 09:20:23] apptainer works
[2026-01-14 09:20:23] Set ATHENA_PROC_NUMBER=8
[2026-01-14 09:20:23] Set ATHENA_CORE_NUMBER=8
[2026-01-14 09:20:23] Starting ATLAS job with PandaID=6969447643
[2026-01-14 09:20:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 10:35:52]  *** The last 200 lines of the pilot log: ***
[2026-01-14 10:35:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969447643/log.48215263._021398.job.log.tgz.1
[2026-01-14 10:35:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/92/log.48215263._021398.job.log.tgz.1
[2026-01-14 10:35:52]  workdir=None
[2026-01-14 10:35:52] ]
[2026-01-14 10:35:52] 2026-01-14 15:34:41,211 | INFO     | transferring file log.48215263._021398.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969447643/log.48215263._021398.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 10:35:52] 2026-01-14 15:34:41,212 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969447643/log.48215263._021398.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._021398.job
[2026-01-14 10:35:52] 2026-01-14 15:34:41,234 | INFO     | adding to output.list: log.48215263._021398.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/92/log.48215263._021398.job.log.tg
[2026-01-14 10:35:52] 2026-01-14 15:34:41,235 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 10:35:52] 2026-01-14 15:34:41,235 | INFO     | summary of transferred files:
[2026-01-14 10:35:52] 2026-01-14 15:34:41,235 | INFO     |  -- lfn=log.48215263._021398.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 10:35:52] 2026-01-14 15:34:41,236 | INFO     | stage-out finished correctly
[2026-01-14 10:35:52] 2026-01-14 15:34:42,454 | INFO     | time since job start (4443s) is within the limit (349056.0s)
[2026-01-14 10:35:52] 2026-01-14 15:34:44,340 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 10:35:52] 2026-01-14 15:34:44,454 | INFO     | time since job start (4445s) is within the limit (349056.0s)
[2026-01-14 10:35:52] 2026-01-14 15:34:45,144 | WARNING  | process 10526 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 10:35:52] 2026-01-14 15:34:45,144 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969447643/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 10:35:52] 2026-01-14 15:34:45,222 | INFO     | number of running child processes to parent process 10526: 1
[2026-01-14 10:35:52] 2026-01-14 15:34:45,222 | INFO     | maximum number of monitored processes: 6
[2026-01-14 10:35:52] 2026-01-14 15:34:46,460 | INFO     | time since job start (4447s) is within the limit (349056.0s)
[2026-01-14 10:35:52] 2026-01-14 15:34:46,848 | INFO     | job 6969447643 has state=finished
[2026-01-14 10:35:52] 2026-01-14 15:34:46,848 | INFO     | preparing for final server update for job 6969447643 in state='finished'
[2026-01-14 10:35:52] 2026-01-14 15:34:46,849 | INFO     | this job has now completed (state=finished)
[2026-01-14 10:35:52] 2026-01-14 15:34:46,849 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 10:35:52] 2026-01-14 15:34:46,849 | INFO     | log transfer has been attempted: DONE
[2026-01-14 10:35:52] 2026-01-14 15:34:46,850 | INFO     | job 6969447643 has finished - writing final server update
[2026-01-14 10:35:52] 2026-01-14 15:34:46,850 | INFO     | total number of processed events: 400 (read)
[2026-01-14 10:35:52] 2026-01-14 15:34:46,851 | INFO     | executing command: lscpu
[2026-01-14 10:35:52] 2026-01-14 15:34:46,876 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 10:35:52] 2026-01-14 15:34:47,725 | INFO     | monitor loop #331: job 0:6969447643 is in state 'finished'
[2026-01-14 10:35:52] 2026-01-14 15:34:47,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:35:52] 2026-01-14 15:34:48,466 | INFO     | time since job start (4449s) is within the limit (349056.0s)
[2026-01-14 10:35:52] 2026-01-14 15:34:50,229 | INFO     | monitor loop #332: job 0:6969447643 is in state 'finished'
[2026-01-14 10:35:52] 2026-01-14 15:34:50,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:35:52] 2026-01-14 15:34:50,472 | INFO     | time since job start (4451s) is within the limit (349056.0s)
[2026-01-14 10:35:52] 2026-01-14 15:34:52,477 | INFO     | time since job start (4453s) is within the limit (349056.0s)
[2026-01-14 10:35:52] 2026-01-14 15:34:52,730 | INFO     | monitor loop #333: job 0:6969447643 is in state 'finished'
[2026-01-14 10:35:52] 2026-01-14 15:34:52,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:35:52] 2026-01-14 15:34:53,361 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 10:35:52] 2026-01-14 15:34:53,364 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2026-01-14 10:35:52] 2026-01-14 15:34:53,366 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969447643/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 10:35:52] 2026-01-14 15:34:53,367 | INFO     | extracted standard info from prmon json
[2026-01-14 10:35:52] 2026-01-14 15:34:53,367 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 10:35:52] 2026-01-14 15:34:53,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 10:35:52] 2026-01-14 15:34:53,368 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 10:35:52] 2026-01-14 15:34:53,368 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 10:35:52] 2026-01-14 15:34:53,371 | INFO     | fitting pss+swap vs Time
[2026-01-14 10:35:52] 2026-01-14 15:34:53,371 | INFO     | sum of square deviations: 89127252.5
[2026-01-14 10:35:52] 2026-01-14 15:34:53,371 | INFO     | sum of deviations: -7308421955.999999
[2026-01-14 10:35:52] 2026-01-14 15:34:53,371 | INFO     | mean x: 1768402756.5
[2026-01-14 10:35:52] 2026-01-14 15:34:53,372 | INFO     | mean y: 2722566.9393939395
[2026-01-14 10:35:52] 2026-01-14 15:34:53,372 | INFO     | intersect: 145011495642.89078
[2026-01-14 10:35:52] 2026-01-14 15:34:53,372 | INFO     | chi2: 0.08644171764083367
[2026-01-14 10:35:52] 2026-01-14 15:34:53,372 | INFO     | current memory leak: -82.00 B/s (using 66 data points, chi2=0.09)
[2026-01-14 10:35:52] 2026-01-14 15:34:53,372 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2026-01-14 10:35:52] 2026-01-14 15:34:53,373 | INFO     | ..............................
[2026-01-14 10:35:52] 2026-01-14 15:34:53,373 | INFO     | . Timing measurements:
[2026-01-14 10:35:52] 2026-01-14 15:34:53,373 | INFO     | . get job = 0 s
[2026-01-14 10:35:52] 2026-01-14 15:34:53,373 | INFO     | . initial setup = 2 s
[2026-01-14 10:35:52] 2026-01-14 15:34:53,373 | INFO     | . payload setup = 7 s
[2026-01-14 10:35:52] 2026-01-14 15:34:53,373 | INFO     | . stage-in = 0 s
[2026-01-14 10:35:52] 2026-01-14 15:34:53,373 | INFO     | . payload execution = 4412 s
[2026-01-14 10:35:52] 2026-01-14 15:34:53,373 | INFO     | . stage-out = 0 s
[2026-01-14 10:35:52] 2026-01-14 15:34:53,373 | INFO     | . log creation = 0 s
[2026-01-14 10:35:52] 2026-01-14 15:34:53,373 | INFO     | ..............................
[2026-01-14 10:35:52] 2026-01-14 15:34:53,639 | INFO     | 
[2026-01-14 10:35:52] 2026-01-14 15:34:53,639 | INFO     | job summary report
[2026-01-14 10:35:52] 2026-01-14 15:34:53,639 | INFO     | --------------------------------------------------
[2026-01-14 10:35:52] 2026-01-14 15:34:53,639 | INFO     | PanDA job id: 6969447643
[2026-01-14 10:35:52] 2026-01-14 15:34:53,640 | INFO     | task id: 48215263
[2026-01-14 10:35:52] 2026-01-14 15:34:53,640 | INFO     | errors: (none)
[2026-01-14 10:35:52] 2026-01-14 15:34:53,640 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 10:35:52] 2026-01-14 15:34:53,640 | INFO     | pilot state: finished 
[2026-01-14 10:35:52] 2026-01-14 15:34:53,640 | INFO     | transexitcode: 0
[2026-01-14 10:35:52] 2026-01-14 15:34:53,641 | INFO     | exeerrorcode: 0
[2026-01-14 10:35:52] 2026-01-14 15:34:53,641 | INFO     | exeerrordiag: 
[2026-01-14 10:35:52] 2026-01-14 15:34:53,641 | INFO     | exitcode: 0
[2026-01-14 10:35:52] 2026-01-14 15:34:53,641 | INFO     | exitmsg: OK
[2026-01-14 10:35:52] 2026-01-14 15:34:53,641 | INFO     | cpuconsumptiontime: 32203 s
[2026-01-14 10:35:52] 2026-01-14 15:34:53,641 | INFO     | nevents: 400
[2026-01-14 10:35:52] 2026-01-14 15:34:53,641 | INFO     | neventsw: 0
[2026-01-14 10:35:52] 2026-01-14 15:34:53,641 | INFO     | pid: 10526
[2026-01-14 10:35:52] 2026-01-14 15:34:53,642 | INFO     | pgrp: 10526
[2026-01-14 10:35:52] 2026-01-14 15:34:53,642 | INFO     | corecount: 8
[2026-01-14 10:35:52] 2026-01-14 15:34:53,642 | INFO     | event service: False
[2026-01-14 10:35:52] 2026-01-14 15:34:53,642 | INFO     | sizes: {0: 2283778, 1: 2283977, 6: 2284239, 11: 2284267, 4424: 2319367, 4428: 2319367, 4437: 2319689}
[2026-01-14 10:35:52] 2026-01-14 15:34:53,642 | INFO     | --------------------------------------------------
[2026-01-14 10:35:52] 2026-01-14 15:34:53,642 | INFO     | 
[2026-01-14 10:35:52] 2026-01-14 15:34:53,642 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 10:35:52] 2026-01-14 15:34:53,668 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,669 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,669 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,669 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,672 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 10:35:52] 2026-01-14 15:34:53,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,672 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 10:35:52] 2026-01-14 15:34:53,672 | INFO     | job 6969447643 has completed (purged errors)
[2026-01-14 10:35:52] 2026-01-14 15:34:53,672 | INFO     | overall cleanup function is called
[2026-01-14 10:35:52] 2026-01-14 15:34:54,680 | INFO     | --- collectZombieJob: --- 10, [10526]
[2026-01-14 10:35:52] 2026-01-14 15:34:54,680 | INFO     | zombie collector waiting for pid 10526
[2026-01-14 10:35:52] 2026-01-14 15:34:54,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 10:35:52] 2026-01-14 15:34:54,680 | INFO     | collected zombie processes
[2026-01-14 10:35:52] 2026-01-14 15:34:54,680 | INFO     | will attempt to kill all subprocesses of pid=10526
[2026-01-14 10:35:52] 2026-01-14 15:34:54,762 | INFO     | process IDs to be killed: [10526] (in reverse order)
[2026-01-14 10:35:52] 2026-01-14 15:34:54,817 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 10:35:52] 2026-01-14 15:34:54,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 10:35:52] 2026-01-14 15:34:54,821 | INFO     | did not find any defunct processes belonging to 10526
[2026-01-14 10:35:52] 2026-01-14 15:34:54,824 | INFO     | did not find any defunct processes belonging to 10526
[2026-01-14 10:35:52] 2026-01-14 15:34:54,824 | INFO     | ready for new job
[2026-01-14 10:35:52] 2026-01-14 15:34:54,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 10:35:52] 2026-01-14 15:34:54,825 | INFO     | ***************************************
[2026-01-14 10:35:52] 2026-01-14 15:34:54,825 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 10:35:52] 2026-01-14 15:34:54,825 | INFO     | ***************************************
[2026-01-14 10:35:52] 2026-01-14 15:34:54,826 | INFO     | 
[2026-01-14 10:35:52] 2026-01-14 15:34:54,826 | INFO     | architecture information:
[2026-01-14 10:35:52] 2026-01-14 15:34:54,827 | INFO     | executing command: cat /etc/os-release
[2026-01-14 10:35:52] 2026-01-14 15:34:54,845 | INFO     | cat /etc/os-release:
[2026-01-14 10:35:52] NAME="CentOS Linux"
[2026-01-14 10:35:52] VERSION="7 (Core)"
[2026-01-14 10:35:52] ID="centos"
[2026-01-14 10:35:52] ID_LIKE="rhel fedora"
[2026-01-14 10:35:52] VERSION_ID="7"
[2026-01-14 10:35:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 10:35:52] ANSI_COLOR="0;31"
[2026-01-14 10:35:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 10:35:52] HOME_URL="https://www.centos.org/"
[2026-01-14 10:35:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 10:35:52] 
[2026-01-14 10:35:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 10:35:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 10:35:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 10:35:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 10:35:52] 
[2026-01-14 10:35:52] 2026-01-14 15:34:54,846 | INFO     | ***************************************
[2026-01-14 10:35:52] 2026-01-14 15:34:55,347 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 10:35:52] 2026-01-14 15:34:55,369 | INFO     | sufficient remaining disk space (17848860672 B)
[2026-01-14 10:35:52] 2026-01-14 15:34:55,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 10:35:52] 2026-01-14 15:34:55,370 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 10:35:52] 2026-01-14 15:34:55,370 | INFO     | update_server=False
[2026-01-14 10:35:52] 2026-01-14 15:34:55,370 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 10:35:52] 2026-01-14 15:34:55,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:35:52] 2026-01-14 15:34:55,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 10:35:52] 2026-01-14 15:34:55,535 | INFO     | all data control threads have been joined
[2026-01-14 10:35:52] 2026-01-14 15:34:56,070 | INFO     | all job control threads have been joined
[2026-01-14 10:35:52] 2026-01-14 15:34:56,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:35:52] 2026-01-14 15:34:56,235 | INFO     | aborting loop
[2026-01-14 10:35:52] 2026-01-14 15:34:56,301 | INFO     | all payload control threads have been joined
[2026-01-14 10:35:52] 2026-01-14 15:34:56,375 | INFO     | [job] queue monitor thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:56,376 | INFO     | [job] retrieve thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:56,413 | INFO     | [data] copytool_in thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:56,417 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:56,541 | INFO     | [data] control thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:56,588 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:56,590 | INFO     | [job] validate thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:56,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 10:35:52] 2026-01-14 15:34:56,949 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:57,071 | INFO     | [job] control thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:57,238 | INFO     | [job] job monitor thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:57,306 | INFO     | [payload] control thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:57,504 | INFO     | [payload] validate_post thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:57,799 | INFO     | [payload] failed_post thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:58,847 | INFO     | [data] copytool_out thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:34:59,377 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:35:06,017 | INFO     | job.realtimelogging is not enabled
[2026-01-14 10:35:52] 2026-01-14 15:35:07,022 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 10:35:52] 2026-01-14 15:35:25,677 | INFO     | PID=4101 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 10:35:52] 2026-01-14 15:35:25,678 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 10:35:52] 2026-01-14 15:35:25,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 10:35:52] 2026-01-14 15:35:25,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 10:35:52] 2026-01-14 15:35:36,815 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-14 10:35:52] 2026-01-14 15:35:46,377 | INFO     | [monitor] cgroup control has ended
[2026-01-14 10:35:52] 2026-01-14 15:35:47,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140443883435840)>', '<ExcThread(monitor, started 140443014657792)>']
[2026-01-14 10:35:52] 2026-01-14 15:35:47,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 10:35:52] 2026-01-14 15:35:47,791 | INFO     | [monitor] control thread has ended
[2026-01-14 10:35:52] 2026-01-14 15:35:52,433 | INFO     | all workflow threads have been joined
[2026-01-14 10:35:52] 2026-01-14 15:35:52,434 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 10:35:52] 2026-01-14 15:35:52,434 | INFO     | traces error code: 0
[2026-01-14 10:35:52] 2026-01-14 15:35:52,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 10:35:52] 2026-01-14 15:35:52,525 [wrapper] ==== pilot stdout END ====
[2026-01-14 10:35:52] 2026-01-14 15:35:52,530 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 10:35:52] 2026-01-14 15:35:52,535 [wrapper] pilotpid: 4101
[2026-01-14 10:35:52] 2026-01-14 15:35:52,539 [wrapper] Pilot exit status: 0
[2026-01-14 10:35:52] 2026-01-14 15:35:52,559 [wrapper] pandaids: 6969447643
[2026-01-14 10:35:52] 2026-01-14 15:35:52,609 [wrapper] cleanup supervisor_pilot 20289 4102
[2026-01-14 10:35:52] 2026-01-14 15:35:52,614 [wrapper] Test setup, not cleaning
[2026-01-14 10:35:52] 2026-01-14 15:35:52,619 [wrapper] apfmon messages muted
[2026-01-14 10:35:52] 2026-01-14 15:35:52,623 [wrapper] ==== wrapper stdout END ====
[2026-01-14 10:35:52] 2026-01-14 15:35:52,627 [wrapper] ==== wrapper stderr END ====
[2026-01-14 10:35:52]  *** Error codes and diagnostics ***
[2026-01-14 10:35:52]     "exeErrorCode": 0,
[2026-01-14 10:35:52]     "exeErrorDiag": "",
[2026-01-14 10:35:52]     "pilotErrorCode": 0,
[2026-01-14 10:35:52]     "pilotErrorDiag": "",
[2026-01-14 10:35:52]  *** Listing of results directory ***
[2026-01-14 10:35:52] total 741684
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 06:27 pilot3.tar.gz
[2026-01-14 10:35:52] -rwx------ 1 boincer umatlas     36322 Jan 14 06:28 runpilot2-wrapper.sh
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 06:29 queuedata.json
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas       100 Jan 14 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 10:35:52] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 09:20 run_atlas
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas       105 Jan 14 09:20 job.xml
[2026-01-14 10:35:52] -rw-r--r-- 2 boincer umatlas 600009934 Jan 14 09:20 EVNT.32794306._000857.pool.root.1
[2026-01-14 10:35:52] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 09:20 start_atlas.sh
[2026-01-14 10:35:52] drwxrwx--x 2 boincer umatlas      4096 Jan 14 09:20 shared
[2026-01-14 10:35:52] -rw-r--r-- 2 boincer umatlas    592401 Jan 14 09:20 input.tar.gz
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas         0 Jan 14 09:20 boinc_lockfile
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas      2507 Jan 14 09:20 pandaJob.out
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas        57 Jan 14 09:20 setup.sh.local
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas    997566 Jan 14 09:20 agis_schedconf.cvmfs.json
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas   1516246 Jan 14 09:20 agis_ddmendpoints.agis.ALL.json
[2026-01-14 10:35:52] drwx------ 5 boincer umatlas      4096 Jan 14 09:20 pilot3
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas      5909 Jan 14 10:28 init_data.xml
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas 153598132 Jan 14 10:34 HITS.48215263._021398.pool.root.1
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas       530 Jan 14 10:34 boinc_task_state.xml
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas        95 Jan 14 10:34 pilot_heartbeat.json
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas      1045 Jan 14 10:34 memory_monitor_summary.json
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas    328915 Jan 14 10:34 log.48215263._021398.job.log.tgz.1
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas      7844 Jan 14 10:34 heartbeat.json
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 10:35 boinc_mmap_file
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas        27 Jan 14 10:35 wrapper_checkpoint.txt
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas      4817 Jan 14 10:35 pilotlog.txt
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas    647344 Jan 14 10:35 log.48215263._021398.job.log.1
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas       357 Jan 14 10:35 output.list
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas       620 Jan 14 10:35 runtime_log
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas    993280 Jan 14 10:35 result.tar.gz
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas       658 Jan 14 10:35 UbsNDm7DE08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7qkKDmKZKQtm.diag
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas      9342 Jan 14 10:35 runtime_log.err
[2026-01-14 10:35:52] -rw-r--r-- 1 boincer umatlas     22281 Jan 14 10:35 stderr.txt
[2026-01-14 10:35:52] HITS file was successfully produced:
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas 153598132 Jan 14 10:34 shared/HITS.pool.root.1
[2026-01-14 10:35:52]  *** Contents of shared directory: ***
[2026-01-14 10:35:52] total 737520
[2026-01-14 10:35:52] -rw-r--r-- 2 boincer umatlas 600009934 Jan 14 09:20 ATLAS.root_0
[2026-01-14 10:35:52] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 09:20 start_atlas.sh
[2026-01-14 10:35:52] -rw-r--r-- 2 boincer umatlas    592401 Jan 14 09:20 input.tar.gz
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas 153598132 Jan 14 10:34 HITS.pool.root.1
[2026-01-14 10:35:52] -rw------- 1 boincer umatlas    993280 Jan 14 10:35 result.tar.gz
10:35:54 (31782): run_atlas exited; CPU time 32178.514296
10:35:54 (31782): called boinc_finish(0)

</stderr_txt>
]]>

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