Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:42:10 (2892822): wrapper (7.7.26015): starting
10:42:10 (2892822): wrapper: running run_atlas (--nthreads 9)
[2026-01-14 10:42:10] Arguments: --nthreads 9
[2026-01-14 10:42:10] Threads: 9
[2026-01-14 10:42:10] Checking for CVMFS
[2026-01-14 10:42:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 10:42:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 10:42:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 10:42:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 10:42:11] 2.13.3.0 10955 30304 268616 155136 0 411 29401959 40960001 23306 16776704 0 45257472 99.770 27864862 37684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 10:42:11] CVMFS is ok
[2026-01-14 10:42:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 10:42:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 10:42:11] Further information can be found at the LHC@home message board.
[2026-01-14 10:42:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 10:42:11] Checking for apptainer binary...
[2026-01-14 10:42:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 10:42:11] Running /usr/bin/apptainer --version
[2026-01-14 10:42:11] apptainer version 1.4.5-2.el9
[2026-01-14 10:42:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 10:42:11] c-211-33-1.aglt2.org
[2026-01-14 10:42:11] apptainer works
[2026-01-14 10:42:11] Set ATHENA_PROC_NUMBER=9
[2026-01-14 10:42:11] Set ATHENA_CORE_NUMBER=9
[2026-01-14 10:42:11] Starting ATLAS job with PandaID=6969306259
[2026-01-14 10:42:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 11:52:43]  *** The last 200 lines of the pilot log: ***
[2026-01-14 11:52:43] 2026-01-14 16:51:50,358 | INFO     | preparing for final server update for job 6969306259 in state='finished'
[2026-01-14 11:52:43] 2026-01-14 16:51:50,358 | INFO     | this job has now completed (state=finished)
[2026-01-14 11:52:43] 2026-01-14 16:51:50,358 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 11:52:43] 2026-01-14 16:51:50,359 | INFO     | log transfer has been attempted: DONE
[2026-01-14 11:52:43] 2026-01-14 16:51:50,359 | INFO     | job 6969306259 has finished - writing final server update
[2026-01-14 11:52:43] 2026-01-14 16:51:50,359 | INFO     | total number of processed events: 400 (read)
[2026-01-14 11:52:43] 2026-01-14 16:51:50,390 | INFO     | executing command: lscpu
[2026-01-14 11:52:43] 2026-01-14 16:51:50,454 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 11:52:43] 2026-01-14 16:51:50,641 | WARNING  | process 2904226 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 11:52:43] 2026-01-14 16:51:50,642 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6969306259/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 11:52:43] 2026-01-14 16:51:51,258 | INFO     | time since job start (4162s) is within the limit (349056.0s)
[2026-01-14 11:52:43] 2026-01-14 16:51:51,541 | INFO     | number of running child processes to parent process 2904226: 1
[2026-01-14 11:52:43] 2026-01-14 16:51:51,542 | INFO     | maximum number of monitored processes: 6
[2026-01-14 11:52:43] 2026-01-14 16:51:53,265 | INFO     | time since job start (4164s) is within the limit (349056.0s)
[2026-01-14 11:52:43] 2026-01-14 16:51:54,061 | INFO     | monitor loop #286: job 0:6969306259 is in state 'finished'
[2026-01-14 11:52:43] 2026-01-14 16:51:54,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:52:43] 2026-01-14 16:51:54,950 | INFO     | PID=2896492 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-14 11:52:43] 2026-01-14 16:51:54,950 | INFO     | .. there are 25 such processes running
[2026-01-14 11:52:43] 2026-01-14 16:51:55,951 | INFO     | time since job start (4166s) is within the limit (349056.0s)
[2026-01-14 11:52:43] 2026-01-14 16:51:55,951 | INFO     | 4168s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-14 11:52:43] 2026-01-14 16:51:56,587 | INFO     | monitor loop #287: job 0:6969306259 is in state 'finished'
[2026-01-14 11:52:43] 2026-01-14 16:51:56,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:52:43] 2026-01-14 16:51:57,963 | INFO     | time since job start (4168s) is within the limit (349056.0s)
[2026-01-14 11:52:43] 2026-01-14 16:51:59,092 | INFO     | monitor loop #288: job 0:6969306259 is in state 'finished'
[2026-01-14 11:52:43] 2026-01-14 16:51:59,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:52:43] 2026-01-14 16:51:59,970 | INFO     | time since job start (4170s) is within the limit (349056.0s)
[2026-01-14 11:52:43] 2026-01-14 16:52:01,597 | INFO     | monitor loop #289: job 0:6969306259 is in state 'finished'
[2026-01-14 11:52:43] 2026-01-14 16:52:01,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:52:43] 2026-01-14 16:52:01,979 | INFO     | time since job start (4172s) is within the limit (349056.0s)
[2026-01-14 11:52:43] 2026-01-14 16:52:04,002 | INFO     | time since job start (4175s) is within the limit (349056.0s)
[2026-01-14 11:52:43] 2026-01-14 16:52:04,108 | INFO     | monitor loop #290: job 0:6969306259 is in state 'finished'
[2026-01-14 11:52:43] 2026-01-14 16:52:04,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:52:43] 2026-01-14 16:52:06,009 | INFO     | time since job start (4177s) is within the limit (349056.0s)
[2026-01-14 11:52:43] 2026-01-14 16:52:06,627 | INFO     | monitor loop #291: job 0:6969306259 is in state 'finished'
[2026-01-14 11:52:43] 2026-01-14 16:52:06,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:52:43] 2026-01-14 16:52:08,016 | INFO     | time since job start (4179s) is within the limit (349056.0s)
[2026-01-14 11:52:43] 2026-01-14 16:52:09,132 | INFO     | monitor loop #292: job 0:6969306259 is in state 'finished'
[2026-01-14 11:52:43] 2026-01-14 16:52:09,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 11:52:43] 2026-01-14 16:52:09,522 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 11:52:43] 2026-01-14 16:52:09,534 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2738.6542083333347
[2026-01-14 11:52:43] 2026-01-14 16:52:09,551 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6969306259/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 11:52:43] 2026-01-14 16:52:09,552 | INFO     | extracted standard info from prmon json
[2026-01-14 11:52:43] 2026-01-14 16:52:09,552 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 11:52:43] 2026-01-14 16:52:09,552 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 11:52:43] 2026-01-14 16:52:09,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 11:52:43] 2026-01-14 16:52:09,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 11:52:43] 2026-01-14 16:52:09,554 | INFO     | fitting pss+swap vs Time
[2026-01-14 11:52:43] 2026-01-14 16:52:09,554 | INFO     | sum of square deviations: 70370218.95081976
[2026-01-14 11:52:43] 2026-01-14 16:52:09,555 | INFO     | sum of deviations: -9422079111.754099
[2026-01-14 11:52:43] 2026-01-14 16:52:09,555 | INFO     | mean x: 1768407516.1311476
[2026-01-14 11:52:43] 2026-01-14 16:52:09,555 | INFO     | mean y: 2761415.344262295
[2026-01-14 11:52:43] 2026-01-14 16:52:09,555 | INFO     | intersect: 236780133537.10794
[2026-01-14 11:52:43] 2026-01-14 16:52:09,555 | INFO     | chi2: 0.03718925479967784
[2026-01-14 11:52:43] 2026-01-14 16:52:09,555 | INFO     | current memory leak: -133.89 B/s (using 61 data points, chi2=0.04)
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | could have reported an average CPU frequency of 2720 MHz (6 samples)
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | ..............................
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | . Timing measurements:
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | . get job = 0 s
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | . initial setup = 2 s
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | . payload setup = 7 s
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | . stage-in = 0 s
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | . payload execution = 4126 s
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | . stage-out = 1 s
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | . log creation = 0 s
[2026-01-14 11:52:43] 2026-01-14 16:52:09,556 | INFO     | ..............................
[2026-01-14 11:52:43] 2026-01-14 16:52:09,682 | INFO     | 
[2026-01-14 11:52:43] 2026-01-14 16:52:09,682 | INFO     | job summary report
[2026-01-14 11:52:43] 2026-01-14 16:52:09,682 | INFO     | --------------------------------------------------
[2026-01-14 11:52:43] 2026-01-14 16:52:09,682 | INFO     | PanDA job id: 6969306259
[2026-01-14 11:52:43] 2026-01-14 16:52:09,682 | INFO     | task id: 48215263
[2026-01-14 11:52:43] 2026-01-14 16:52:09,682 | INFO     | errors: (none)
[2026-01-14 11:52:43] 2026-01-14 16:52:09,682 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 11:52:43] 2026-01-14 16:52:09,682 | INFO     | pilot state: finished 
[2026-01-14 11:52:43] 2026-01-14 16:52:09,682 | INFO     | transexitcode: 0
[2026-01-14 11:52:43] 2026-01-14 16:52:09,682 | INFO     | exeerrorcode: 0
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | exeerrordiag: 
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | exitcode: 0
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | exitmsg: OK
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | cpuconsumptiontime: 27941 s
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | nevents: 400
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | neventsw: 0
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | pid: 2904226
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | pgrp: 2904226
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | corecount: 9
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | event service: False
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | sizes: {0: 2283121, 1: 2283977, 7: 2284239, 12: 2284267, 4137: 2310314, 4138: 2310313, 4141: 2319551, 4162: 2319689}
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | --------------------------------------------------
[2026-01-14 11:52:43] 2026-01-14 16:52:09,683 | INFO     | 
[2026-01-14 11:52:43] 2026-01-14 16:52:09,684 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-14 11:52:43] 2026-01-14 16:52:09,746 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,746 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,746 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,746 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 11:52:43] 2026-01-14 16:52:09,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,748 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 11:52:43] 2026-01-14 16:52:09,748 | INFO     | job 6969306259 has completed (purged errors)
[2026-01-14 11:52:43] 2026-01-14 16:52:09,748 | INFO     | overall cleanup function is called
[2026-01-14 11:52:43] 2026-01-14 16:52:10,761 | INFO     | --- collectZombieJob: --- 10, [2904226]
[2026-01-14 11:52:43] 2026-01-14 16:52:10,761 | INFO     | zombie collector waiting for pid 2904226
[2026-01-14 11:52:43] 2026-01-14 16:52:10,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 11:52:43] 2026-01-14 16:52:10,761 | INFO     | collected zombie processes
[2026-01-14 11:52:43] 2026-01-14 16:52:10,761 | INFO     | will attempt to kill all subprocesses of pid=2904226
[2026-01-14 11:52:43] 2026-01-14 16:52:11,630 | INFO     | process IDs to be killed: [2904226] (in reverse order)
[2026-01-14 11:52:43] 2026-01-14 16:52:11,869 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 11:52:43] 2026-01-14 16:52:11,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 11:52:43] 2026-01-14 16:52:11,962 | INFO     | did not find any defunct processes belonging to 2904226
[2026-01-14 11:52:43] 2026-01-14 16:52:12,018 | INFO     | did not find any defunct processes belonging to 2904226
[2026-01-14 11:52:43] 2026-01-14 16:52:12,018 | INFO     | ready for new job
[2026-01-14 11:52:43] 2026-01-14 16:52:12,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 11:52:43] 2026-01-14 16:52:12,020 | INFO     | ***************************************
[2026-01-14 11:52:43] 2026-01-14 16:52:12,020 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 11:52:43] 2026-01-14 16:52:12,020 | INFO     | ***************************************
[2026-01-14 11:52:43] 2026-01-14 16:52:12,020 | INFO     | 
[2026-01-14 11:52:43] 2026-01-14 16:52:12,025 | INFO     | architecture information:
[2026-01-14 11:52:43] 2026-01-14 16:52:12,026 | INFO     | executing command: cat /etc/os-release
[2026-01-14 11:52:43] 2026-01-14 16:52:12,043 | INFO     | cat /etc/os-release:
[2026-01-14 11:52:43] NAME="CentOS Linux"
[2026-01-14 11:52:43] VERSION="7 (Core)"
[2026-01-14 11:52:43] ID="centos"
[2026-01-14 11:52:43] ID_LIKE="rhel fedora"
[2026-01-14 11:52:43] VERSION_ID="7"
[2026-01-14 11:52:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 11:52:43] ANSI_COLOR="0;31"
[2026-01-14 11:52:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 11:52:43] HOME_URL="https://www.centos.org/"
[2026-01-14 11:52:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 11:52:43] 
[2026-01-14 11:52:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 11:52:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 11:52:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 11:52:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 11:52:43] 
[2026-01-14 11:52:43] 2026-01-14 16:52:12,043 | INFO     | ***************************************
[2026-01-14 11:52:43] 2026-01-14 16:52:12,547 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-14 11:52:43] 2026-01-14 16:52:12,597 | INFO     | sufficient remaining disk space (122857455616 B)
[2026-01-14 11:52:43] 2026-01-14 16:52:12,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 11:52:43] 2026-01-14 16:52:12,598 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 11:52:43] 2026-01-14 16:52:12,598 | INFO     | update_server=False
[2026-01-14 11:52:43] 2026-01-14 16:52:12,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 11:52:43] 2026-01-14 16:52:12,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 11:52:43] 2026-01-14 16:52:12,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:52:43] 2026-01-14 16:52:12,662 | INFO     | aborting loop
[2026-01-14 11:52:43] 2026-01-14 16:52:13,067 | INFO     | all payload control threads have been joined
[2026-01-14 11:52:43] 2026-01-14 16:52:13,604 | INFO     | [job] retrieve thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:13,668 | INFO     | [job] job monitor thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:13,721 | INFO     | all data control threads have been joined
[2026-01-14 11:52:43] 2026-01-14 16:52:13,733 | INFO     | [job] validate thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:13,737 | INFO     | [payload] validate_post thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:13,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 11:52:43] 2026-01-14 16:52:13,889 | INFO     | all job control threads have been joined
[2026-01-14 11:52:43] 2026-01-14 16:52:14,065 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:14,073 | INFO     | [payload] control thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:14,231 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:14,233 | INFO     | [data] copytool_in thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:14,234 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:14,368 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:14,725 | INFO     | [payload] failed_post thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:14,726 | INFO     | [data] control thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:14,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:52:43] 2026-01-14 16:52:14,895 | INFO     | [job] control thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:15,750 | INFO     | [job] queue monitor thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:15,835 | INFO     | [data] copytool_out thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:16,607 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 11:52:43] 2026-01-14 16:52:36,427 | INFO     | [monitor] cgroup control has ended
[2026-01-14 11:52:43] 2026-01-14 16:52:37,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134313305920)>', '<ExcThread(monitor, started 140133927982848)>']
[2026-01-14 11:52:43] 2026-01-14 16:52:41,695 | INFO     | PID=2896492 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 11:52:43] 2026-01-14 16:52:41,695 | INFO     | .. there are 25 such processes running
[2026-01-14 11:52:43] 2026-01-14 16:52:41,696 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 11:52:43] 2026-01-14 16:52:41,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 11:52:43] 2026-01-14 16:52:41,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 11:52:43] 2026-01-14 16:52:41,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 11:52:43] 2026-01-14 16:52:41,696 | INFO     | [monitor] control thread has ended
[2026-01-14 11:52:43] 2026-01-14 16:52:42,488 | INFO     | all workflow threads have been joined
[2026-01-14 11:52:43] 2026-01-14 16:52:42,488 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 11:52:43] 2026-01-14 16:52:42,488 | INFO     | traces error code: 0
[2026-01-14 11:52:43] 2026-01-14 16:52:42,488 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 11:52:43] 2026-01-14 16:52:42,740 [wrapper] ==== pilot stdout END ====
[2026-01-14 11:52:43] 2026-01-14 16:52:42,742 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 11:52:43] 2026-01-14 16:52:42,744 [wrapper] pilotpid: 2896492
[2026-01-14 11:52:43] 2026-01-14 16:52:42,746 [wrapper] Pilot exit status: 0
[2026-01-14 11:52:43] 2026-01-14 16:52:42,773 [wrapper] pandaids: 6969306259
[2026-01-14 11:52:43] 2026-01-14 16:52:42,886 [wrapper] cleanup supervisor_pilot 3121513 2896493
[2026-01-14 11:52:43] 2026-01-14 16:52:42,902 [wrapper] Test setup, not cleaning
[2026-01-14 11:52:43] 2026-01-14 16:52:42,925 [wrapper] apfmon messages muted
[2026-01-14 11:52:43] 2026-01-14 16:52:42,969 [wrapper] ==== wrapper stdout END ====
[2026-01-14 11:52:43] 2026-01-14 16:52:43,001 [wrapper] ==== wrapper stderr END ====
[2026-01-14 11:52:43]  *** Error codes and diagnostics ***
[2026-01-14 11:52:43]     "exeErrorCode": 0,
[2026-01-14 11:52:43]     "exeErrorDiag": "",
[2026-01-14 11:52:43]     "pilotErrorCode": 0,
[2026-01-14 11:52:43]     "pilotErrorDiag": "",
[2026-01-14 11:52:43]  *** Listing of results directory ***
[2026-01-14 11:52:43] total 739076
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas    597923 Jan  7 08:01 pilot3.tar.gz
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 22:13 queuedata.json
[2026-01-14 11:52:43] -rwx------. 1 boincer umatlas     36322 Jan 13 22:13 runpilot2-wrapper.sh
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas       100 Jan 14 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 11:52:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 10:42 run_atlas
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas       105 Jan 14 10:42 job.xml
[2026-01-14 11:52:43] -rw-r--r--. 2 boincer umatlas 593980529 Jan 14 10:42 EVNT.32794306._000491.pool.root.1
[2026-01-14 11:52:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 10:42 start_atlas.sh
[2026-01-14 11:52:43] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 10:42 shared
[2026-01-14 11:52:43] -rw-r--r--. 2 boincer umatlas    610540 Jan 14 10:42 input.tar.gz
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas         0 Jan 14 10:42 boinc_lockfile
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas      2507 Jan 14 10:42 pandaJob.out
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas        57 Jan 14 10:42 setup.sh.local
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas    997956 Jan 14 10:42 agis_schedconf.cvmfs.json
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas   1516246 Jan 14 10:42 agis_ddmendpoints.agis.ALL.json
[2026-01-14 11:52:43] drwx------. 7 boincer umatlas      4096 Jan 14 10:42 pilot3
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas      6859 Jan 14 11:45 init_data.xml
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas 156983703 Jan 14 11:51 HITS.48215263._012265.pool.root.1
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas       531 Jan 14 11:51 boinc_task_state.xml
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas      1039 Jan 14 11:51 memory_monitor_summary.json
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas    335081 Jan 14 11:51 log.48215263._012265.job.log.tgz.1
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas      7827 Jan 14 11:52 heartbeat.json
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas        27 Jan 14 11:52 wrapper_checkpoint.txt
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 11:52 boinc_mmap_file
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas        95 Jan 14 11:52 pilot_heartbeat.json
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas      4825 Jan 14 11:52 pilotlog.txt
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas    607948 Jan 14 11:52 log.48215263._012265.job.log.1
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas       357 Jan 14 11:52 output.list
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas       620 Jan 14 11:52 runtime_log
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas    962560 Jan 14 11:52 result.tar.gz
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas      9352 Jan 14 11:52 runtime_log.err
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas       654 Jan 14 11:52 GLTKDmFV6z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8upKDmQmtkGm.diag
[2026-01-14 11:52:43] -rw-r--r--. 1 boincer umatlas     22420 Jan 14 11:52 stderr.txt
[2026-01-14 11:52:43] HITS file was successfully produced:
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas 156983703 Jan 14 11:51 shared/HITS.pool.root.1
[2026-01-14 11:52:43]  *** Contents of shared directory: ***
[2026-01-14 11:52:43] total 734932
[2026-01-14 11:52:43] -rw-r--r--. 2 boincer umatlas 593980529 Jan 14 10:42 ATLAS.root_0
[2026-01-14 11:52:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 10:42 start_atlas.sh
[2026-01-14 11:52:43] -rw-r--r--. 2 boincer umatlas    610540 Jan 14 10:42 input.tar.gz
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas 156983703 Jan 14 11:51 HITS.pool.root.1
[2026-01-14 11:52:43] -rw-------. 1 boincer umatlas    962560 Jan 14 11:52 result.tar.gz
11:52:45 (2892822): run_atlas exited; CPU time 28080.288578
11:52:45 (2892822): called boinc_finish(0)

</stderr_txt>
]]>

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