Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:04:23 (2891756): wrapper (7.7.26015): starting
09:04:23 (2891756): wrapper: running run_atlas (--nthreads 11)
[2026-01-14 09:04:23] Arguments: --nthreads 11
[2026-01-14 09:04:23] Threads: 11
[2026-01-14 09:04:23] Checking for CVMFS
[2026-01-14 09:04:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 09:04:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 09:04:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 09:04:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 09:04:24] 2.13.3.0 7433 30179 230476 155133 2 786 37404257 40960000 20319 16776704 0 90749594 99.674 82522145 39790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 09:04:24] CVMFS is ok
[2026-01-14 09:04:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 09:04:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 09:04:24] Further information can be found at the LHC@home message board.
[2026-01-14 09:04:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 09:04:24] Checking for apptainer binary...
[2026-01-14 09:04:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 09:04:24] Running /usr/bin/apptainer --version
[2026-01-14 09:04:24] apptainer version 1.4.5-2.el9
[2026-01-14 09:04:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 09:04:25] c-212-16.aglt2.org
[2026-01-14 09:04:25] apptainer works
[2026-01-14 09:04:25] Set ATHENA_PROC_NUMBER=11
[2026-01-14 09:04:25] Set ATHENA_CORE_NUMBER=11
[2026-01-14 09:04:25] Starting ATLAS job with PandaID=6969361245
[2026-01-14 09:04:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 10:26:11]  *** The last 200 lines of the pilot log: ***
[2026-01-14 10:26:11]  status=None
[2026-01-14 10:26:11]  status_code=0
[2026-01-14 10:26:11]  storage_token=
[2026-01-14 10:26:11]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6969361245/log.48215263._016482.job.log.tgz.1
[2026-01-14 10:26:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/cf/log.48215263._016482.job.log.tgz.1
[2026-01-14 10:26:11]  workdir=None
[2026-01-14 10:26:11] ]
[2026-01-14 10:26:11] 2026-01-14 15:25:12,806 | INFO     | transferring file log.48215263._016482.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6969361245/log.48215263._016482.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 10:26:11] 2026-01-14 15:25:12,806 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6969361245/log.48215263._016482.job.log.tgz.1 /tmp/boinchome/slots/4/log.48215263._016482.job
[2026-01-14 10:26:11] 2026-01-14 15:25:12,822 | INFO     | adding to output.list: log.48215263._016482.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/cf/log.48215263._016482.job.log.tg
[2026-01-14 10:26:11] 2026-01-14 15:25:12,823 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 10:26:11] 2026-01-14 15:25:12,823 | INFO     | summary of transferred files:
[2026-01-14 10:26:11] 2026-01-14 15:25:12,823 | INFO     |  -- lfn=log.48215263._016482.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 10:26:11] 2026-01-14 15:25:12,823 | INFO     | stage-out finished correctly
[2026-01-14 10:26:11] 2026-01-14 15:25:13,457 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 10:26:11] 2026-01-14 15:25:14,155 | INFO     | time since job start (4833s) is within the limit (349056.0s)
[2026-01-14 10:26:11] 2026-01-14 15:25:14,941 | INFO     | job 6969361245 has state=finished
[2026-01-14 10:26:11] 2026-01-14 15:25:14,942 | INFO     | preparing for final server update for job 6969361245 in state='finished'
[2026-01-14 10:26:11] 2026-01-14 15:25:14,942 | INFO     | this job has now completed (state=finished)
[2026-01-14 10:26:11] 2026-01-14 15:25:14,943 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 10:26:11] 2026-01-14 15:25:14,943 | INFO     | log transfer has been attempted: DONE
[2026-01-14 10:26:11] 2026-01-14 15:25:14,943 | INFO     | job 6969361245 has finished - writing final server update
[2026-01-14 10:26:11] 2026-01-14 15:25:14,943 | INFO     | total number of processed events: 400 (read)
[2026-01-14 10:26:11] 2026-01-14 15:25:14,944 | INFO     | executing command: lscpu
[2026-01-14 10:26:11] 2026-01-14 15:25:15,004 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 10:26:11] 2026-01-14 15:25:16,184 | INFO     | time since job start (4835s) is within the limit (349056.0s)
[2026-01-14 10:26:11] 2026-01-14 15:25:17,967 | INFO     | PID=2895630 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 10:26:11] 2026-01-14 15:25:17,968 | INFO     | .. there are 23 such processes running
[2026-01-14 10:26:11] 2026-01-14 15:25:18,388 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 10:26:11] 2026-01-14 15:25:18,396 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3485.1098749999987
[2026-01-14 10:26:11] 2026-01-14 15:25:18,405 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6969361245/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 10:26:11] 2026-01-14 15:25:18,406 | INFO     | extracted standard info from prmon json
[2026-01-14 10:26:11] 2026-01-14 15:25:18,406 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 10:26:11] 2026-01-14 15:25:18,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 10:26:11] 2026-01-14 15:25:18,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 10:26:11] 2026-01-14 15:25:18,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 10:26:11] 2026-01-14 15:25:18,408 | INFO     | fitting pss+swap vs Time
[2026-01-14 10:26:11] 2026-01-14 15:25:18,408 | INFO     | sum of square deviations: 115705353.65277782
[2026-01-14 10:26:11] 2026-01-14 15:25:18,408 | INFO     | sum of deviations: 362867895.01388884
[2026-01-14 10:26:11] 2026-01-14 15:25:18,408 | INFO     | mean x: 1768401986.5694444
[2026-01-14 10:26:11] 2026-01-14 15:25:18,409 | INFO     | mean y: 2698304.097222222
[2026-01-14 10:26:11] 2026-01-14 15:25:18,432 | INFO     | intersect: -5543253427.146874
[2026-01-14 10:26:11] 2026-01-14 15:25:18,436 | INFO     | chi2: 0.0018827393907640065
[2026-01-14 10:26:11] 2026-01-14 15:25:18,436 | INFO     | current memory leak: 3.14 B/s (using 72 data points, chi2=0.00)
[2026-01-14 10:26:11] 2026-01-14 15:25:18,436 | INFO     | could have reported an average CPU frequency of 3423 MHz (6 samples)
[2026-01-14 10:26:11] 2026-01-14 15:25:18,436 | INFO     | ..............................
[2026-01-14 10:26:11] 2026-01-14 15:25:18,436 | INFO     | . Timing measurements:
[2026-01-14 10:26:11] 2026-01-14 15:25:18,437 | INFO     | . get job = 0 s
[2026-01-14 10:26:11] 2026-01-14 15:25:18,437 | INFO     | . initial setup = 2 s
[2026-01-14 10:26:11] 2026-01-14 15:25:18,437 | INFO     | . payload setup = 7 s
[2026-01-14 10:26:11] 2026-01-14 15:25:18,437 | INFO     | . stage-in = 0 s
[2026-01-14 10:26:11] 2026-01-14 15:25:18,437 | INFO     | . payload execution = 4799 s
[2026-01-14 10:26:11] 2026-01-14 15:25:18,437 | INFO     | . stage-out = 0 s
[2026-01-14 10:26:11] 2026-01-14 15:25:18,437 | INFO     | . log creation = 0 s
[2026-01-14 10:26:11] 2026-01-14 15:25:18,437 | INFO     | ..............................
[2026-01-14 10:26:11] 2026-01-14 15:25:18,968 | INFO     | time since job start (4837s) is within the limit (349056.0s)
[2026-01-14 10:26:11] 2026-01-14 15:25:19,016 | INFO     | 
[2026-01-14 10:26:11] 2026-01-14 15:25:19,020 | INFO     | job summary report
[2026-01-14 10:26:11] 2026-01-14 15:25:19,044 | INFO     | --------------------------------------------------
[2026-01-14 10:26:11] 2026-01-14 15:25:19,057 | WARNING  | process 2902383 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 10:26:11] 2026-01-14 15:25:19,060 | INFO     | PanDA job id: 6969361245
[2026-01-14 10:26:11] 2026-01-14 15:25:19,060 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6969361245/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 10:26:11] 2026-01-14 15:25:19,068 | INFO     | task id: 48215263
[2026-01-14 10:26:11] 2026-01-14 15:25:19,072 | INFO     | errors: (none)
[2026-01-14 10:26:11] 2026-01-14 15:25:19,072 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 10:26:11] 2026-01-14 15:25:19,072 | INFO     | pilot state: finished 
[2026-01-14 10:26:11] 2026-01-14 15:25:19,072 | INFO     | transexitcode: 0
[2026-01-14 10:26:11] 2026-01-14 15:25:19,072 | INFO     | exeerrorcode: 0
[2026-01-14 10:26:11] 2026-01-14 15:25:19,072 | INFO     | exeerrordiag: 
[2026-01-14 10:26:11] 2026-01-14 15:25:19,072 | INFO     | exitcode: 0
[2026-01-14 10:26:11] 2026-01-14 15:25:19,072 | INFO     | exitmsg: OK
[2026-01-14 10:26:11] 2026-01-14 15:25:19,072 | INFO     | cpuconsumptiontime: 20171 s
[2026-01-14 10:26:11] 2026-01-14 15:25:19,073 | INFO     | nevents: 400
[2026-01-14 10:26:11] 2026-01-14 15:25:19,073 | INFO     | neventsw: 0
[2026-01-14 10:26:11] 2026-01-14 15:25:19,073 | INFO     | pid: 2902383
[2026-01-14 10:26:11] 2026-01-14 15:25:19,073 | INFO     | pgrp: 2902383
[2026-01-14 10:26:11] 2026-01-14 15:25:19,073 | INFO     | corecount: 11
[2026-01-14 10:26:11] 2026-01-14 15:25:19,073 | INFO     | event service: False
[2026-01-14 10:26:11] 2026-01-14 15:25:19,073 | INFO     | sizes: {0: 2283121, 1: 2283977, 8: 2284239, 12: 2284267, 4811: 2310377, 4812: 2319375, 4813: 2319559, 4818: 2319753}
[2026-01-14 10:26:11] 2026-01-14 15:25:19,073 | INFO     | --------------------------------------------------
[2026-01-14 10:26:11] 2026-01-14 15:25:19,073 | INFO     | 
[2026-01-14 10:26:11] 2026-01-14 15:25:19,073 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-14 10:26:11] 2026-01-14 15:25:19,069 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6969361245/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 10:26:11] 2026-01-14 15:25:19,085 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-14 10:26:11] 2026-01-14 15:25:19,085 | WARNING  | maxPSS not found in memory monitor output
[2026-01-14 10:26:11] 2026-01-14 15:25:19,097 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,098 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 10:26:11] 2026-01-14 15:25:19,099 | INFO     | job 6969361245 has completed (purged errors)
[2026-01-14 10:26:11] 2026-01-14 15:25:19,099 | INFO     | overall cleanup function is called
[2026-01-14 10:26:11] 2026-01-14 15:25:19,523 | INFO     | number of running child processes to parent process 2902383: 1
[2026-01-14 10:26:11] 2026-01-14 15:25:19,524 | INFO     | maximum number of monitored processes: 6
[2026-01-14 10:26:11] 2026-01-14 15:25:19,524 | INFO     | aborting job monitoring since job object (job id=6969361245) has expired
[2026-01-14 10:26:11] 2026-01-14 15:25:20,107 | INFO     | --- collectZombieJob: --- 10, [2902383]
[2026-01-14 10:26:11] 2026-01-14 15:25:20,107 | INFO     | zombie collector waiting for pid 2902383
[2026-01-14 10:26:11] 2026-01-14 15:25:20,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 10:26:11] 2026-01-14 15:25:20,107 | INFO     | collected zombie processes
[2026-01-14 10:26:11] 2026-01-14 15:25:20,108 | INFO     | will attempt to kill all subprocesses of pid=2902383
[2026-01-14 10:26:11] 2026-01-14 15:25:20,543 | INFO     | process IDs to be killed: [2902383] (in reverse order)
[2026-01-14 10:26:11] 2026-01-14 15:25:20,664 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 10:26:11] 2026-01-14 15:25:20,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 10:26:11] 2026-01-14 15:25:20,677 | INFO     | did not find any defunct processes belonging to 2902383
[2026-01-14 10:26:11] 2026-01-14 15:25:20,716 | INFO     | did not find any defunct processes belonging to 2902383
[2026-01-14 10:26:11] 2026-01-14 15:25:20,717 | INFO     | ready for new job
[2026-01-14 10:26:11] 2026-01-14 15:25:20,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 10:26:11] 2026-01-14 15:25:20,718 | INFO     | ***************************************
[2026-01-14 10:26:11] 2026-01-14 15:25:20,719 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 10:26:11] 2026-01-14 15:25:20,719 | INFO     | ***************************************
[2026-01-14 10:26:11] 2026-01-14 15:25:20,719 | INFO     | 
[2026-01-14 10:26:11] 2026-01-14 15:25:20,733 | INFO     | architecture information:
[2026-01-14 10:26:11] 2026-01-14 15:25:20,739 | INFO     | executing command: cat /etc/os-release
[2026-01-14 10:26:11] 2026-01-14 15:25:20,765 | INFO     | cat /etc/os-release:
[2026-01-14 10:26:11] NAME="CentOS Linux"
[2026-01-14 10:26:11] VERSION="7 (Core)"
[2026-01-14 10:26:11] ID="centos"
[2026-01-14 10:26:11] ID_LIKE="rhel fedora"
[2026-01-14 10:26:11] VERSION_ID="7"
[2026-01-14 10:26:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 10:26:11] ANSI_COLOR="0;31"
[2026-01-14 10:26:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 10:26:11] HOME_URL="https://www.centos.org/"
[2026-01-14 10:26:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 10:26:11] 
[2026-01-14 10:26:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 10:26:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 10:26:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 10:26:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 10:26:11] 
[2026-01-14 10:26:11] 2026-01-14 15:25:20,766 | INFO     | ***************************************
[2026-01-14 10:26:11] 2026-01-14 15:25:21,270 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-14 10:26:11] 2026-01-14 15:25:21,316 | INFO     | sufficient remaining disk space (124442902528 B)
[2026-01-14 10:26:11] 2026-01-14 15:25:21,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 10:26:11] 2026-01-14 15:25:21,316 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 10:26:11] 2026-01-14 15:25:21,316 | INFO     | update_server=False
[2026-01-14 10:26:11] 2026-01-14 15:25:21,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 10:26:11] 2026-01-14 15:25:21,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 10:26:11] 2026-01-14 15:25:21,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:26:11] 2026-01-14 15:25:21,317 | INFO     | aborting loop
[2026-01-14 10:26:11] 2026-01-14 15:25:21,970 | INFO     | all data control threads have been joined
[2026-01-14 10:26:11] 2026-01-14 15:25:22,322 | INFO     | [job] retrieve thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:22,322 | INFO     | [job] job monitor thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:22,471 | INFO     | all payload control threads have been joined
[2026-01-14 10:26:11] 2026-01-14 15:25:22,627 | INFO     | [data] copytool_in thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:22,662 | INFO     | [payload] validate_post thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:22,809 | INFO     | [job] validate thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:22,838 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:22,974 | INFO     | all job control threads have been joined
[2026-01-14 10:26:11] 2026-01-14 15:25:22,975 | INFO     | [data] control thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:23,272 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:23,322 | INFO     | [data] copytool_out thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:23,405 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:23,476 | INFO     | [payload] control thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:23,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:26:11] 2026-01-14 15:25:23,763 | INFO     | [payload] failed_post thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:23,979 | INFO     | [job] control thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:24,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 10:26:11] 2026-01-14 15:25:24,692 | INFO     | [job] queue monitor thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:28,075 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:32,265 | INFO     | job.realtimelogging is not enabled
[2026-01-14 10:26:11] 2026-01-14 15:25:33,271 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 10:26:11] 2026-01-14 15:25:49,680 | INFO     | [monitor] cgroup control has ended
[2026-01-14 10:26:11] 2026-01-14 15:25:51,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814670153536)>', '<ExcThread(monitor, started 139814322034432)>']
[2026-01-14 10:26:11] 2026-01-14 15:25:52,743 | INFO     | PID=2895630 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 10:26:11] 2026-01-14 15:25:52,743 | INFO     | .. there are 23 such processes running
[2026-01-14 10:26:11] 2026-01-14 15:25:52,743 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 10:26:11] 2026-01-14 15:25:52,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 10:26:11] 2026-01-14 15:25:52,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 10:26:11] 2026-01-14 15:25:52,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 10:26:11] 2026-01-14 15:25:52,743 | INFO     | [monitor] control thread has ended
[2026-01-14 10:26:11] 2026-01-14 15:25:56,589 | INFO     | all workflow threads have been joined
[2026-01-14 10:26:11] 2026-01-14 15:25:56,589 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 10:26:11] 2026-01-14 15:25:56,589 | INFO     | traces error code: 0
[2026-01-14 10:26:11] 2026-01-14 15:25:56,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 10:26:11] 2026-01-14 15:25:56,874 [wrapper] ==== pilot stdout END ====
[2026-01-14 10:26:11] 2026-01-14 15:25:56,878 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 10:26:11] 2026-01-14 15:25:56,880 [wrapper] pilotpid: 2895630
[2026-01-14 10:26:11] 2026-01-14 15:25:56,882 [wrapper] Pilot exit status: 0
[2026-01-14 10:26:11] 2026-01-14 15:25:56,891 [wrapper] pandaids: 6969361245
[2026-01-14 10:26:11] 2026-01-14 15:25:56,990 [wrapper] cleanup supervisor_pilot 3269424 2895631
[2026-01-14 10:26:11] 2026-01-14 15:25:56,993 [wrapper] Test setup, not cleaning
[2026-01-14 10:26:11] 2026-01-14 15:25:56,995 [wrapper] apfmon messages muted
[2026-01-14 10:26:11] 2026-01-14 15:25:56,997 [wrapper] ==== wrapper stdout END ====
[2026-01-14 10:26:11] 2026-01-14 15:25:56,999 [wrapper] ==== wrapper stderr END ====
[2026-01-14 10:26:11]  *** Error codes and diagnostics ***
[2026-01-14 10:26:11]     "exeErrorCode": 0,
[2026-01-14 10:26:11]     "exeErrorDiag": "",
[2026-01-14 10:26:11]     "pilotErrorCode": 0,
[2026-01-14 10:26:11]     "pilotErrorDiag": "",
[2026-01-14 10:26:11]  *** Listing of results directory ***
[2026-01-14 10:26:11] total 737696
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 02:33 pilot3.tar.gz
[2026-01-14 10:26:11] -rwx------. 1 boincer umatlas     36322 Jan 14 02:36 runpilot2-wrapper.sh
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 02:37 queuedata.json
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas       100 Jan 14 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 10:26:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 09:04 run_atlas
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas       105 Jan 14 09:04 job.xml
[2026-01-14 10:26:11] -rw-r--r--. 2 boincer umatlas 598058573 Jan 14 09:04 EVNT.32794306._000660.pool.root.1
[2026-01-14 10:26:11] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 09:04 start_atlas.sh
[2026-01-14 10:26:11] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 09:04 shared
[2026-01-14 10:26:11] -rw-r--r--. 2 boincer umatlas    592392 Jan 14 09:04 input.tar.gz
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas         0 Jan 14 09:04 boinc_lockfile
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas      2507 Jan 14 09:04 pandaJob.out
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas        57 Jan 14 09:04 setup.sh.local
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas    997566 Jan 14 09:04 agis_schedconf.cvmfs.json
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas   1516246 Jan 14 09:04 agis_ddmendpoints.agis.ALL.json
[2026-01-14 10:26:11] drwx------. 5 boincer umatlas      4096 Jan 14 09:04 pilot3
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas      6955 Jan 14 10:19 init_data.xml
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas 151383613 Jan 14 10:24 HITS.48215263._016482.pool.root.1
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas       530 Jan 14 10:24 boinc_task_state.xml
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas      1035 Jan 14 10:25 memory_monitor_summary.json
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas    362924 Jan 14 10:25 log.48215263._016482.job.log.tgz.1
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas      7770 Jan 14 10:25 heartbeat.json
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas        95 Jan 14 10:25 pilot_heartbeat.json
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas      4897 Jan 14 10:25 pilotlog.txt
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas    654471 Jan 14 10:25 log.48215263._016482.job.log.1
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas       357 Jan 14 10:25 output.list
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas       620 Jan 14 10:25 runtime_log
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas   1034240 Jan 14 10:25 result.tar.gz
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas      9344 Jan 14 10:25 runtime_log.err
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas       652 Jan 14 10:25 jiqLDmKbA08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnPkKDmmIIPsm.diag
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas        27 Jan 14 10:26 wrapper_checkpoint.txt
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 10:26 boinc_mmap_file
[2026-01-14 10:26:11] -rw-r--r--. 1 boincer umatlas     22212 Jan 14 10:26 stderr.txt
[2026-01-14 10:26:11] HITS file was successfully produced:
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas 151383613 Jan 14 10:24 shared/HITS.pool.root.1
[2026-01-14 10:26:11]  *** Contents of shared directory: ***
[2026-01-14 10:26:11] total 733496
[2026-01-14 10:26:11] -rw-r--r--. 2 boincer umatlas 598058573 Jan 14 09:04 ATLAS.root_0
[2026-01-14 10:26:11] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 09:04 start_atlas.sh
[2026-01-14 10:26:11] -rw-r--r--. 2 boincer umatlas    592392 Jan 14 09:04 input.tar.gz
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas 151383613 Jan 14 10:24 HITS.pool.root.1
[2026-01-14 10:26:11] -rw-------. 1 boincer umatlas   1034240 Jan 14 10:25 result.tar.gz
10:26:13 (2891756): run_atlas exited; CPU time 20309.896579
10:26:13 (2891756): called boinc_finish(0)

</stderr_txt>
]]>

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