Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:57:57 (691151): wrapper (7.7.26015): starting
08:57:57 (691151): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 08:57:57] Arguments: --nthreads 8
[2026-01-14 08:57:57] Threads: 8
[2026-01-14 08:57:57] Checking for CVMFS
[2026-01-14 08:57:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 08:57:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 08:57:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 08:57:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 08:57:58] 2.13.3.0 12846 100653 248368 155133 2 741 27036585 32935937 20789 16776704 0 444169632 99.476 627085052 38367 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 08:57:58] CVMFS is ok
[2026-01-14 08:57:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 08:57:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 08:57:58] Further information can be found at the LHC@home message board.
[2026-01-14 08:57:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 08:57:58] Checking for apptainer binary...
[2026-01-14 08:57:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 08:57:58] Running /usr/bin/apptainer --version
[2026-01-14 08:57:58] apptainer version 1.4.5-2.el9
[2026-01-14 08:57:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 08:57:58] c7-16-9.aglt2.org
[2026-01-14 08:57:58] apptainer works
[2026-01-14 08:57:58] Set ATHENA_PROC_NUMBER=8
[2026-01-14 08:57:58] Set ATHENA_CORE_NUMBER=8
[2026-01-14 08:57:58] Starting ATLAS job with PandaID=6969305726
[2026-01-14 08:57:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 10:14:24]  *** The last 200 lines of the pilot log: ***
[2026-01-14 10:14:24] 2026-01-14 15:13:05,329 | INFO     | time since job start (4496s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:06,991 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-14 10:14:24] 2026-01-14 15:13:07,165 | INFO     | monitor loop #289: job 0:6969305726 is in state 'finished'
[2026-01-14 10:14:24] 2026-01-14 15:13:07,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:14:24] 2026-01-14 15:13:07,336 | INFO     | time since job start (4498s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:09,343 | INFO     | time since job start (4500s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:09,671 | INFO     | monitor loop #290: job 0:6969305726 is in state 'finished'
[2026-01-14 10:14:24] 2026-01-14 15:13:09,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:14:24] 2026-01-14 15:13:11,350 | INFO     | time since job start (4502s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:12,179 | INFO     | monitor loop #291: job 0:6969305726 is in state 'finished'
[2026-01-14 10:14:24] 2026-01-14 15:13:12,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:14:24] 2026-01-14 15:13:13,357 | INFO     | time since job start (4504s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:14,703 | INFO     | monitor loop #292: job 0:6969305726 is in state 'finished'
[2026-01-14 10:14:24] 2026-01-14 15:13:14,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:14:24] 2026-01-14 15:13:15,588 | INFO     | PID=702797 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 10:14:24] 2026-01-14 15:13:15,588 | INFO     | .. there are 26 such processes running
[2026-01-14 10:14:24] 2026-01-14 15:13:16,589 | INFO     | time since job start (4507s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:17,209 | INFO     | monitor loop #293: job 0:6969305726 is in state 'finished'
[2026-01-14 10:14:24] 2026-01-14 15:13:17,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:14:24] 2026-01-14 15:13:18,619 | INFO     | time since job start (4509s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:19,713 | INFO     | monitor loop #294: job 0:6969305726 is in state 'finished'
[2026-01-14 10:14:24] 2026-01-14 15:13:19,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:14:24] 2026-01-14 15:13:20,626 | INFO     | time since job start (4511s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:22,231 | INFO     | monitor loop #295: job 0:6969305726 is in state 'finished'
[2026-01-14 10:14:24] 2026-01-14 15:13:22,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:14:24] 2026-01-14 15:13:22,674 | INFO     | time since job start (4513s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:24,682 | INFO     | time since job start (4515s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:24,748 | INFO     | monitor loop #296: job 0:6969305726 is in state 'finished'
[2026-01-14 10:14:24] 2026-01-14 15:13:24,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:14:24] 2026-01-14 15:13:26,690 | INFO     | time since job start (4517s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:27,253 | INFO     | monitor loop #297: job 0:6969305726 is in state 'finished'
[2026-01-14 10:14:24] 2026-01-14 15:13:27,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:14:24] 2026-01-14 15:13:28,697 | INFO     | time since job start (4519s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:29,764 | INFO     | monitor loop #298: job 0:6969305726 is in state 'finished'
[2026-01-14 10:14:24] 2026-01-14 15:13:29,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:14:24] 2026-01-14 15:13:30,703 | INFO     | time since job start (4521s) is within the limit (349056.0s)
[2026-01-14 10:14:24] 2026-01-14 15:13:30,877 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 10:14:24] 2026-01-14 15:13:30,887 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3295.7788541666664
[2026-01-14 10:14:24] 2026-01-14 15:13:30,901 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6969305726/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 10:14:24] 2026-01-14 15:13:30,901 | INFO     | extracted standard info from prmon json
[2026-01-14 10:14:24] 2026-01-14 15:13:30,901 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 10:14:24] 2026-01-14 15:13:30,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 10:14:24] 2026-01-14 15:13:30,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 10:14:24] 2026-01-14 15:13:30,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 10:14:24] 2026-01-14 15:13:30,903 | INFO     | fitting pss+swap vs Time
[2026-01-14 10:14:24] 2026-01-14 15:13:30,903 | INFO     | sum of square deviations: 93244723.94029854
[2026-01-14 10:14:24] 2026-01-14 15:13:30,903 | INFO     | sum of deviations: -204013138.52238804
[2026-01-14 10:14:24] 2026-01-14 15:13:30,903 | INFO     | mean x: 1768401434.0298507
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | mean y: 2564510.76119403
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | intersect: 3871707036.7760177
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | chi2: 0.0014703167131317632
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | current memory leak: -2.19 B/s (using 67 data points, chi2=0.00)
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | could have reported an average CPU frequency of 3282 MHz (6 samples)
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | ..............................
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | . Timing measurements:
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | . get job = 0 s
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | . initial setup = 2 s
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | . payload setup = 5 s
[2026-01-14 10:14:24] 2026-01-14 15:13:30,904 | INFO     | . stage-in = 0 s
[2026-01-14 10:14:24] 2026-01-14 15:13:30,905 | INFO     | . payload execution = 4462 s
[2026-01-14 10:14:24] 2026-01-14 15:13:30,905 | INFO     | . stage-out = 1 s
[2026-01-14 10:14:24] 2026-01-14 15:13:30,905 | INFO     | . log creation = 0 s
[2026-01-14 10:14:24] 2026-01-14 15:13:30,905 | INFO     | ..............................
[2026-01-14 10:14:24] 2026-01-14 15:13:31,091 | INFO     | 
[2026-01-14 10:14:24] 2026-01-14 15:13:31,092 | INFO     | job summary report
[2026-01-14 10:14:24] 2026-01-14 15:13:31,092 | INFO     | --------------------------------------------------
[2026-01-14 10:14:24] 2026-01-14 15:13:31,092 | INFO     | PanDA job id: 6969305726
[2026-01-14 10:14:24] 2026-01-14 15:13:31,092 | INFO     | task id: 48215263
[2026-01-14 10:14:24] 2026-01-14 15:13:31,092 | INFO     | errors: (none)
[2026-01-14 10:14:24] 2026-01-14 15:13:31,092 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 10:14:24] 2026-01-14 15:13:31,092 | INFO     | pilot state: finished 
[2026-01-14 10:14:24] 2026-01-14 15:13:31,092 | INFO     | transexitcode: 0
[2026-01-14 10:14:24] 2026-01-14 15:13:31,092 | INFO     | exeerrorcode: 0
[2026-01-14 10:14:24] 2026-01-14 15:13:31,092 | INFO     | exeerrordiag: 
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | exitcode: 0
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | exitmsg: OK
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | cpuconsumptiontime: 20179 s
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | nevents: 400
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | neventsw: 0
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | pid: 720390
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | pgrp: 720390
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | corecount: 8
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | event service: False
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | sizes: {0: 2283948, 5: 2284210, 11: 2284266, 4474: 2310461, 4475: 2310460, 4477: 2319514, 4478: 2319698, 4506: 2319892}
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | --------------------------------------------------
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | 
[2026-01-14 10:14:24] 2026-01-14 15:13:31,093 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-14 10:14:24] 2026-01-14 15:13:31,401 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,401 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,401 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,401 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,401 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,401 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 10:14:24] 2026-01-14 15:13:31,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,403 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 10:14:24] 2026-01-14 15:13:31,403 | INFO     | job 6969305726 has completed (purged errors)
[2026-01-14 10:14:24] 2026-01-14 15:13:31,403 | INFO     | overall cleanup function is called
[2026-01-14 10:14:24] 2026-01-14 15:13:32,427 | INFO     | --- collectZombieJob: --- 10, [720390]
[2026-01-14 10:14:24] 2026-01-14 15:13:32,428 | INFO     | zombie collector waiting for pid 720390
[2026-01-14 10:14:24] 2026-01-14 15:13:32,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 10:14:24] 2026-01-14 15:13:32,428 | INFO     | collected zombie processes
[2026-01-14 10:14:24] 2026-01-14 15:13:32,428 | INFO     | will attempt to kill all subprocesses of pid=720390
[2026-01-14 10:14:24] 2026-01-14 15:13:33,505 | INFO     | process IDs to be killed: [720390] (in reverse order)
[2026-01-14 10:14:24] 2026-01-14 15:13:33,659 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 10:14:24] 2026-01-14 15:13:33,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 10:14:24] 2026-01-14 15:13:33,693 | INFO     | did not find any defunct processes belonging to 720390
[2026-01-14 10:14:24] 2026-01-14 15:13:33,720 | INFO     | did not find any defunct processes belonging to 720390
[2026-01-14 10:14:24] 2026-01-14 15:13:33,720 | INFO     | ready for new job
[2026-01-14 10:14:24] 2026-01-14 15:13:33,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 10:14:24] 2026-01-14 15:13:33,721 | INFO     | ***************************************
[2026-01-14 10:14:24] 2026-01-14 15:13:33,722 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 10:14:24] 2026-01-14 15:13:33,722 | INFO     | ***************************************
[2026-01-14 10:14:24] 2026-01-14 15:13:33,722 | INFO     | 
[2026-01-14 10:14:24] 2026-01-14 15:13:33,726 | INFO     | architecture information:
[2026-01-14 10:14:24] 2026-01-14 15:13:33,727 | INFO     | executing command: cat /etc/os-release
[2026-01-14 10:14:24] 2026-01-14 15:13:33,800 | INFO     | cat /etc/os-release:
[2026-01-14 10:14:24] NAME="CentOS Linux"
[2026-01-14 10:14:24] VERSION="7 (Core)"
[2026-01-14 10:14:24] ID="centos"
[2026-01-14 10:14:24] ID_LIKE="rhel fedora"
[2026-01-14 10:14:24] VERSION_ID="7"
[2026-01-14 10:14:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 10:14:24] ANSI_COLOR="0;31"
[2026-01-14 10:14:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 10:14:24] HOME_URL="https://www.centos.org/"
[2026-01-14 10:14:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 10:14:24] 
[2026-01-14 10:14:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 10:14:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 10:14:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 10:14:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 10:14:24] 
[2026-01-14 10:14:24] 2026-01-14 15:13:33,800 | INFO     | ***************************************
[2026-01-14 10:14:24] 2026-01-14 15:13:34,304 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-14 10:14:24] 2026-01-14 15:13:34,326 | INFO     | sufficient remaining disk space (68311580672 B)
[2026-01-14 10:14:24] 2026-01-14 15:13:34,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 10:14:24] 2026-01-14 15:13:34,326 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 10:14:24] 2026-01-14 15:13:34,326 | INFO     | update_server=False
[2026-01-14 10:14:24] 2026-01-14 15:13:34,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 10:14:24] 2026-01-14 15:13:34,361 | INFO     | all data control threads have been joined
[2026-01-14 10:14:24] 2026-01-14 15:13:34,803 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-14 10:14:24] 2026-01-14 15:13:34,803 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-14 10:14:24] 2026-01-14 15:13:34,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:14:24] 2026-01-14 15:13:34,803 | INFO     | will abort loop
[2026-01-14 10:14:24] 2026-01-14 15:13:35,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 10:14:24] 2026-01-14 15:13:35,333 | INFO     | [job] retrieve thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:35,367 | INFO     | [data] control thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:35,394 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:35,537 | INFO     | all payload control threads have been joined
[2026-01-14 10:14:24] 2026-01-14 15:13:35,700 | INFO     | [job] validate thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:35,735 | INFO     | [payload] failed_post thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:35,741 | INFO     | all job control threads have been joined
[2026-01-14 10:14:24] 2026-01-14 15:13:35,809 | INFO     | [job] job monitor thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:35,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:14:24] 2026-01-14 15:13:36,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 10:14:24] 2026-01-14 15:13:36,327 | INFO     | [data] copytool_in thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:36,533 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:36,543 | INFO     | [payload] control thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:36,562 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:36,568 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:36,686 | INFO     | [payload] validate_post thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:36,747 | INFO     | [job] control thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:36,998 | INFO     | [job] queue monitor thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:37,175 | INFO     | [data] copytool_out thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:13:40,208 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 10:14:24] 2026-01-14 15:14:04,969 | INFO     | PID=702797 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 10:14:24] 2026-01-14 15:14:04,969 | INFO     | .. there are 26 such processes running
[2026-01-14 10:14:24] 2026-01-14 15:14:04,970 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 10:14:24] 2026-01-14 15:14:04,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 10:14:24] 2026-01-14 15:14:04,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 10:14:24] 2026-01-14 15:14:17,124 | INFO     | [monitor] cgroup control has ended
[2026-01-14 10:14:24] 2026-01-14 15:14:17,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140637185308480)>', '<ExcThread(monitor, started 140636405618432)>']
[2026-01-14 10:14:24] 2026-01-14 15:14:18,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 10:14:24] 2026-01-14 15:14:18,067 | INFO     | [monitor] control thread has ended
[2026-01-14 10:14:24] 2026-01-14 15:14:22,312 | INFO     | all workflow threads have been joined
[2026-01-14 10:14:24] 2026-01-14 15:14:22,312 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 10:14:24] 2026-01-14 15:14:22,312 | INFO     | traces error code: 0
[2026-01-14 10:14:24] 2026-01-14 15:14:22,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 10:14:24] 2026-01-14 15:14:22,535 [wrapper] ==== pilot stdout END ====
[2026-01-14 10:14:24] 2026-01-14 15:14:22,583 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 10:14:24] 2026-01-14 15:14:22,618 [wrapper] pilotpid: 702797
[2026-01-14 10:14:24] 2026-01-14 15:14:22,660 [wrapper] Pilot exit status: 0
[2026-01-14 10:14:24] 2026-01-14 15:14:22,882 [wrapper] pandaids: 6969305726
[2026-01-14 10:14:24] 2026-01-14 15:14:23,864 [wrapper] cleanup supervisor_pilot 1061522 702798
[2026-01-14 10:14:24] 2026-01-14 15:14:23,905 [wrapper] Test setup, not cleaning
[2026-01-14 10:14:24] 2026-01-14 15:14:23,932 [wrapper] apfmon messages muted
[2026-01-14 10:14:24] 2026-01-14 15:14:23,942 [wrapper] ==== wrapper stdout END ====
[2026-01-14 10:14:24] 2026-01-14 15:14:23,965 [wrapper] ==== wrapper stderr END ====
[2026-01-14 10:14:24]  *** Error codes and diagnostics ***
[2026-01-14 10:14:24]     "exeErrorCode": 0,
[2026-01-14 10:14:24]     "exeErrorDiag": "",
[2026-01-14 10:14:24]     "pilotErrorCode": 0,
[2026-01-14 10:14:24]     "pilotErrorDiag": "",
[2026-01-14 10:14:24]  *** Listing of results directory ***
[2026-01-14 10:14:24] total 737024
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 20:50 pilot3.tar.gz
[2026-01-14 10:14:24] -rwx------. 1 boincer umatlas     36322 Jan 13 20:54 runpilot2-wrapper.sh
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 20:57 queuedata.json
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas       100 Jan 14 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 10:14:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 08:57 run_atlas
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas       105 Jan 14 08:57 job.xml
[2026-01-14 10:14:24] -rw-r--r--. 2 boincer umatlas 596504451 Jan 14 08:57 EVNT.32794306._000478.pool.root.1
[2026-01-14 10:14:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 08:57 start_atlas.sh
[2026-01-14 10:14:24] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 08:57 shared
[2026-01-14 10:14:24] -rw-r--r--. 2 boincer umatlas    592401 Jan 14 08:57 input.tar.gz
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas         0 Jan 14 08:57 boinc_lockfile
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas      2506 Jan 14 08:57 pandaJob.out
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas        57 Jan 14 08:57 setup.sh.local
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas    997566 Jan 14 08:58 agis_schedconf.cvmfs.json
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas   1516246 Jan 14 08:58 agis_ddmendpoints.agis.ALL.json
[2026-01-14 10:14:24] drwx------. 5 boincer umatlas      4096 Jan 14 08:58 pilot3
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas      6943 Jan 14 10:09 init_data.xml
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas 152380654 Jan 14 10:11 HITS.48215263._011944.pool.root.1
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas       530 Jan 14 10:11 boinc_task_state.xml
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas      1031 Jan 14 10:12 memory_monitor_summary.json
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas    328081 Jan 14 10:13 log.48215263._011944.job.log.tgz.1
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas      7763 Jan 14 10:13 heartbeat.json
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas        95 Jan 14 10:14 pilot_heartbeat.json
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 10:14 boinc_mmap_file
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas        27 Jan 14 10:14 wrapper_checkpoint.txt
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas      5009 Jan 14 10:14 pilotlog.txt
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas    626091 Jan 14 10:14 log.48215263._011944.job.log.1
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas       357 Jan 14 10:14 output.list
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas       620 Jan 14 10:14 runtime_log
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas    972800 Jan 14 10:14 result.tar.gz
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas      9337 Jan 14 10:14 runtime_log.err
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas       651 Jan 14 10:14 052NDmjG5z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6ejKDmZJCM0m.diag
[2026-01-14 10:14:24] -rw-r--r--. 1 boincer umatlas     12304 Jan 14 10:14 stderr.txt
[2026-01-14 10:14:24] HITS file was successfully produced:
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas 152380654 Jan 14 10:11 shared/HITS.pool.root.1
[2026-01-14 10:14:24]  *** Contents of shared directory: ***
[2026-01-14 10:14:24] total 732892
[2026-01-14 10:14:24] -rw-r--r--. 2 boincer umatlas 596504451 Jan 14 08:57 ATLAS.root_0
[2026-01-14 10:14:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 08:57 start_atlas.sh
[2026-01-14 10:14:24] -rw-r--r--. 2 boincer umatlas    592401 Jan 14 08:57 input.tar.gz
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas 152380654 Jan 14 10:11 HITS.pool.root.1
[2026-01-14 10:14:24] -rw-------. 1 boincer umatlas    972800 Jan 14 10:14 result.tar.gz
10:14:25 (691151): run_atlas exited; CPU time 20335.748047
10:14:25 (691151): called boinc_finish(0)

</stderr_txt>
]]>

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