Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:02:17 (170082): wrapper (7.7.26015): starting
14:02:17 (170082): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 14:02:17] Arguments: --nthreads 8
[2026-01-14 14:02:17] Threads: 8
[2026-01-14 14:02:17] Checking for CVMFS
[2026-01-14 14:02:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 14:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 14:02:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 14:02:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 14:02:20] 2.13.3.0 170253 0 31596 155133 3 1 3459021 6144001 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-14 14:02:20] CVMFS is ok
[2026-01-14 14:02:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 14:02:20] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-14 14:02:20] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-14 14:02:20] Further information can be found at the LHC@home message board.
[2026-01-14 14:02:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 14:02:20] Checking for apptainer binary...
[2026-01-14 14:02:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 14:02:20] Running /usr/bin/apptainer --version
[2026-01-14 14:02:20] apptainer version 1.4.5
[2026-01-14 14:02:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 14:02:20] stone
[2026-01-14 14:02:20] apptainer works
[2026-01-14 14:02:20] Set ATHENA_PROC_NUMBER=8
[2026-01-14 14:02:20] Set ATHENA_CORE_NUMBER=8
[2026-01-14 14:02:20] Starting ATLAS job with PandaID=6969359785
[2026-01-14 14:02:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 15:04:43]  *** The last 200 lines of the pilot log: ***
[2026-01-14 15:04:43]  is_tar=False
[2026-01-14 15:04:43]  lfn=log.48215263._016358.job.log.tgz.1
[2026-01-14 15:04:43]  mtime=0
[2026-01-14 15:04:43]  protocol_id=None
[2026-01-14 15:04:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 15:04:43]  replicas=None
[2026-01-14 15:04:43]  scope=mc23_13p6TeV
[2026-01-14 15:04:43]  status=None
[2026-01-14 15:04:43]  status_code=0
[2026-01-14 15:04:43]  storage_token=
[2026-01-14 15:04:43]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6969359785/log.48215263._016358.job.log.tgz.1
[2026-01-14 15:04:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/e1/log.48215263._016358.job.log.tgz.1
[2026-01-14 15:04:43]  workdir=None
[2026-01-14 15:04:43] ]
[2026-01-14 15:04:43] 2026-01-14 15:04:02,863 | INFO     | transferring file log.48215263._016358.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6969359785/log.48215263._016358.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-14 15:04:43] 2026-01-14 15:04:02,864 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6969359785/log.48215263._016358.job.log.tgz.1 /var/lib/boinc/slots/1/log.48215263._016358.job
[2026-01-14 15:04:43] 2026-01-14 15:04:02,872 | INFO     | adding to output.list: log.48215263._016358.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/e1/log.48215263._016358.job.log.tg
[2026-01-14 15:04:43] 2026-01-14 15:04:02,873 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 15:04:43] 2026-01-14 15:04:02,873 | INFO     | summary of transferred files:
[2026-01-14 15:04:43] 2026-01-14 15:04:02,873 | INFO     |  -- lfn=log.48215263._016358.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 15:04:43] 2026-01-14 15:04:02,873 | INFO     | stage-out finished correctly
[2026-01-14 15:04:43] 2026-01-14 15:04:03,066 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 15:04:43] 2026-01-14 15:04:03,370 | INFO     | PID=174507 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 15:04:43] 2026-01-14 15:04:04,370 | INFO     | time since job start (3692s) is within the limit (349056.0s)
[2026-01-14 15:04:43] 2026-01-14 15:04:04,584 | INFO     | job 6969359785 has state=finished
[2026-01-14 15:04:43] 2026-01-14 15:04:04,585 | INFO     | preparing for final server update for job 6969359785 in state='finished'
[2026-01-14 15:04:43] 2026-01-14 15:04:04,586 | INFO     | this job has now completed (state=finished)
[2026-01-14 15:04:43] 2026-01-14 15:04:04,586 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 15:04:43] 2026-01-14 15:04:04,586 | INFO     | log transfer has been attempted: DONE
[2026-01-14 15:04:43] 2026-01-14 15:04:04,586 | INFO     | job 6969359785 has finished - writing final server update
[2026-01-14 15:04:43] 2026-01-14 15:04:04,587 | INFO     | total number of processed events: 400 (read)
[2026-01-14 15:04:43] 2026-01-14 15:04:04,589 | INFO     | executing command: lscpu
[2026-01-14 15:04:43] 2026-01-14 15:04:04,600 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 15:04:43] 2026-01-14 15:04:06,192 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 15:04:43] 2026-01-14 15:04:06,193 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 2842.192125
[2026-01-14 15:04:43] 2026-01-14 15:04:06,194 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6969359785/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 15:04:43] 2026-01-14 15:04:06,194 | INFO     | extracted standard info from prmon json
[2026-01-14 15:04:43] 2026-01-14 15:04:06,195 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 15:04:43] 2026-01-14 15:04:06,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 15:04:43] 2026-01-14 15:04:06,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 15:04:43] 2026-01-14 15:04:06,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 15:04:43] 2026-01-14 15:04:06,196 | INFO     | fitting pss+swap vs Time
[2026-01-14 15:04:43] 2026-01-14 15:04:06,196 | INFO     | sum of square deviations: 48810217.5
[2026-01-14 15:04:43] 2026-01-14 15:04:06,196 | INFO     | sum of deviations: -3622864572.5
[2026-01-14 15:04:43] 2026-01-14 15:04:06,196 | INFO     | mean x: 1768401291.5
[2026-01-14 15:04:43] 2026-01-14 15:04:06,196 | INFO     | mean y: 2662751.0185185187
[2026-01-14 15:04:43] 2026-01-14 15:04:06,196 | INFO     | intersect: 131259574051.16988
[2026-01-14 15:04:43] 2026-01-14 15:04:06,196 | INFO     | chi2: 0.08150801008514023
[2026-01-14 15:04:43] 2026-01-14 15:04:06,196 | INFO     | current memory leak: -74.22 B/s (using 54 data points, chi2=0.08)
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | could have reported an average CPU frequency of 3251 MHz (6 samples)
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | ..............................
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | . Timing measurements:
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | . get job = 0 s
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | . initial setup = 2 s
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | . payload setup = 2 s
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | . stage-in = 0 s
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | . payload execution = 3671 s
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | . stage-out = 0 s
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | . log creation = 0 s
[2026-01-14 15:04:43] 2026-01-14 15:04:06,197 | INFO     | ..............................
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | 
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | job summary report
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | --------------------------------------------------
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | PanDA job id: 6969359785
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | task id: 48215263
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | errors: (none)
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | pilot state: finished 
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | transexitcode: 0
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | exeerrorcode: 0
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | exeerrordiag: 
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | exitcode: 0
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | exitmsg: OK
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | cpuconsumptiontime: 26586 s
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | nevents: 400
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | neventsw: 0
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | pid: 180993
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | pgrp: 180993
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | corecount: 8
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | event service: False
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | sizes: {0: 2283948, 2: 2284210, 11: 2284238, 3678: 2319040, 3681: 2319178}
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | --------------------------------------------------
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | 
[2026-01-14 15:04:43] 2026-01-14 15:04:06,239 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,251 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 15:04:43] 2026-01-14 15:04:06,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,252 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 15:04:43] 2026-01-14 15:04:06,252 | INFO     | job 6969359785 has completed (purged errors)
[2026-01-14 15:04:43] 2026-01-14 15:04:06,252 | INFO     | overall cleanup function is called
[2026-01-14 15:04:43] 2026-01-14 15:04:07,258 | INFO     | --- collectZombieJob: --- 10, [180993]
[2026-01-14 15:04:43] 2026-01-14 15:04:07,258 | INFO     | zombie collector waiting for pid 180993
[2026-01-14 15:04:43] 2026-01-14 15:04:07,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 15:04:43] 2026-01-14 15:04:07,258 | INFO     | collected zombie processes
[2026-01-14 15:04:43] 2026-01-14 15:04:07,258 | INFO     | will attempt to kill all subprocesses of pid=180993
[2026-01-14 15:04:43] 2026-01-14 15:04:07,300 | INFO     | process IDs to be killed: [180993] (in reverse order)
[2026-01-14 15:04:43] 2026-01-14 15:04:07,320 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 15:04:43] 2026-01-14 15:04:07,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 15:04:43] 2026-01-14 15:04:07,321 | INFO     | did not find any defunct processes belonging to 180993
[2026-01-14 15:04:43] 2026-01-14 15:04:07,322 | INFO     | did not find any defunct processes belonging to 180993
[2026-01-14 15:04:43] 2026-01-14 15:04:07,322 | INFO     | ready for new job
[2026-01-14 15:04:43] 2026-01-14 15:04:07,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 15:04:43] 2026-01-14 15:04:07,323 | INFO     | ***************************************
[2026-01-14 15:04:43] 2026-01-14 15:04:07,323 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 15:04:43] 2026-01-14 15:04:07,323 | INFO     | ***************************************
[2026-01-14 15:04:43] 2026-01-14 15:04:07,323 | INFO     | 
[2026-01-14 15:04:43] 2026-01-14 15:04:07,323 | INFO     | architecture information:
[2026-01-14 15:04:43] 2026-01-14 15:04:07,323 | INFO     | executing command: cat /etc/os-release
[2026-01-14 15:04:43] 2026-01-14 15:04:07,329 | INFO     | cat /etc/os-release:
[2026-01-14 15:04:43] NAME="CentOS Linux"
[2026-01-14 15:04:43] VERSION="7 (Core)"
[2026-01-14 15:04:43] ID="centos"
[2026-01-14 15:04:43] ID_LIKE="rhel fedora"
[2026-01-14 15:04:43] VERSION_ID="7"
[2026-01-14 15:04:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 15:04:43] ANSI_COLOR="0;31"
[2026-01-14 15:04:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 15:04:43] HOME_URL="https://www.centos.org/"
[2026-01-14 15:04:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 15:04:43] 
[2026-01-14 15:04:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 15:04:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 15:04:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 15:04:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 15:04:43] 
[2026-01-14 15:04:43] 2026-01-14 15:04:07,329 | INFO     | ***************************************
[2026-01-14 15:04:43] 2026-01-14 15:04:07,832 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-14 15:04:43] 2026-01-14 15:04:07,840 | INFO     | sufficient remaining disk space (13729005568 B)
[2026-01-14 15:04:43] 2026-01-14 15:04:07,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 15:04:43] 2026-01-14 15:04:07,840 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 15:04:43] 2026-01-14 15:04:07,840 | INFO     | update_server=False
[2026-01-14 15:04:43] 2026-01-14 15:04:07,840 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 15:04:43] 2026-01-14 15:04:07,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 15:04:43] 2026-01-14 15:04:08,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 15:04:43] 2026-01-14 15:04:08,442 | INFO     | all data control threads have been joined
[2026-01-14 15:04:43] 2026-01-14 15:04:08,744 | INFO     | all job control threads have been joined
[2026-01-14 15:04:43] 2026-01-14 15:04:08,846 | INFO     | [job] retrieve thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:08,847 | INFO     | [job] queue monitor thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:08,866 | INFO     | all payload control threads have been joined
[2026-01-14 15:04:43] 2026-01-14 15:04:08,999 | INFO     | [payload] failed_post thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:09,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 15:04:43] 2026-01-14 15:04:09,236 | WARNING  | process 180993 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 15:04:43] 2026-01-14 15:04:09,267 | INFO     | using path: /var/lib/boinc/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 15:04:43] 2026-01-14 15:04:09,305 | INFO     | number of running child processes to parent process 180993: 1
[2026-01-14 15:04:43] 2026-01-14 15:04:09,305 | INFO     | maximum number of monitored processes: 6
[2026-01-14 15:04:43] 2026-01-14 15:04:09,305 | INFO     | aborting job monitoring since job object (job id=6969359785) has expired
[2026-01-14 15:04:43] 2026-01-14 15:04:09,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 15:04:43] 2026-01-14 15:04:09,305 | INFO     | will abort loop
[2026-01-14 15:04:43] 2026-01-14 15:04:09,447 | INFO     | [data] control thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:09,549 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:09,674 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:09,750 | INFO     | [job] control thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:09,871 | INFO     | [payload] control thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:09,911 | INFO     | [job] validate thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:09,962 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:09,983 | INFO     | [data] copytool_in thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:09,985 | INFO     | [payload] validate_post thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:10,310 | INFO     | [job] job monitor thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:10,422 | INFO     | [data] copytool_out thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:13,145 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:18,562 | INFO     | job.realtimelogging is not enabled
[2026-01-14 15:04:43] 2026-01-14 15:04:19,567 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 15:04:43] 2026-01-14 15:04:37,512 | INFO     | PID=174507 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 15:04:43] 2026-01-14 15:04:37,513 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 15:04:43] 2026-01-14 15:04:37,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 15:04:43] 2026-01-14 15:04:37,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 15:04:43] 2026-01-14 15:04:38,472 | INFO     | [monitor] cgroup control has ended
[2026-01-14 15:04:43] 2026-01-14 15:04:38,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762212579136)>', '<ExcThread(monitor, started 139761591252736)>']
[2026-01-14 15:04:43] 2026-01-14 15:04:39,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 15:04:43] 2026-01-14 15:04:39,522 | INFO     | [monitor] control thread has ended
[2026-01-14 15:04:43] 2026-01-14 15:04:43,857 | INFO     | all workflow threads have been joined
[2026-01-14 15:04:43] 2026-01-14 15:04:43,857 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 15:04:43] 2026-01-14 15:04:43,857 | INFO     | traces error code: 0
[2026-01-14 15:04:43] 2026-01-14 15:04:43,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 15:04:43] 2026-01-14 15:04:43,943 [wrapper] ==== pilot stdout END ====
[2026-01-14 15:04:43] 2026-01-14 15:04:43,944 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 15:04:43] 2026-01-14 15:04:43,945 [wrapper] pilotpid: 174507
[2026-01-14 15:04:43] 2026-01-14 15:04:43,946 [wrapper] Pilot exit status: 0
[2026-01-14 15:04:43] 2026-01-14 15:04:43,951 [wrapper] pandaids: 6969359785
[2026-01-14 15:04:43] 2026-01-14 15:04:43,964 [wrapper] cleanup supervisor_pilot  204249 174508
[2026-01-14 15:04:43] 2026-01-14 15:04:43,965 [wrapper] Test setup, not cleaning
[2026-01-14 15:04:43] 2026-01-14 15:04:43,966 [wrapper] apfmon messages muted
[2026-01-14 15:04:43] 2026-01-14 15:04:43,967 [wrapper] ==== wrapper stdout END ====
[2026-01-14 15:04:43] 2026-01-14 15:04:43,969 [wrapper] ==== wrapper stderr END ====
[2026-01-14 15:04:43]  *** Error codes and diagnostics ***
[2026-01-14 15:04:43]     "exeErrorCode": 0,
[2026-01-14 15:04:43]     "exeErrorDiag": "",
[2026-01-14 15:04:43]     "pilotErrorCode": 0,
[2026-01-14 15:04:43]     "pilotErrorDiag": "",
[2026-01-14 15:04:43]  *** Listing of results directory ***
[2026-01-14 15:04:43] total 747948
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc    579449 Jan 14 05:14 pilot3.tar.gz
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc      5112 Jan 14 05:17 queuedata.json
[2026-01-14 15:04:43] -rwx------ 1 boinc boinc     36322 Jan 14 05:18 runpilot2-wrapper.sh
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc       100 Jan 14 14:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 15:04:43] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 14:02 run_atlas
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc       105 Jan 14 14:02 job.xml
[2026-01-14 15:04:43] -rw-r--r-- 2 boinc boinc 603216868 Jan 14 14:02 EVNT.32794306._000655.pool.root.1
[2026-01-14 15:04:43] -rw-r--r-- 2 boinc boinc    592396 Jan 14 14:02 input.tar.gz
[2026-01-14 15:04:43] -rw-r--r-- 2 boinc boinc     15847 Jan 14 14:02 start_atlas.sh
[2026-01-14 15:04:43] drwxrwx--x 2 boinc boinc      4096 Jan 14 14:02 shared
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc         0 Jan 14 14:02 boinc_setup_complete
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc      6096 Jan 14 14:02 init_data.xml
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc         0 Jan 14 14:02 boinc_lockfile
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc      2506 Jan 14 14:02 pandaJob.out
[2026-01-14 15:04:43] -rw------- 1 boinc boinc    997566 Jan 14 14:02 agis_schedconf.cvmfs.json
[2026-01-14 15:04:43] -rw------- 1 boinc boinc   1516246 Jan 14 14:02 agis_ddmendpoints.agis.ALL.json
[2026-01-14 15:04:43] drwx------ 5 boinc boinc      4096 Jan 14 14:02 pilot3
[2026-01-14 15:04:43] -rw------- 1 boinc boinc 157042973 Jan 14 15:03 HITS.48215263._016358.pool.root.1
[2026-01-14 15:04:43] -rw------- 1 boinc boinc      1026 Jan 14 15:03 memory_monitor_summary.json
[2026-01-14 15:04:43] -rw------- 1 boinc boinc    305814 Jan 14 15:04 log.48215263._016358.job.log.tgz.1
[2026-01-14 15:04:43] -rw------- 1 boinc boinc      7748 Jan 14 15:04 heartbeat.json
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc       531 Jan 14 15:04 boinc_task_state.xml
[2026-01-14 15:04:43] -rw------- 1 boinc boinc        95 Jan 14 15:04 pilot_heartbeat.json
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc      8192 Jan 14 15:04 boinc_mmap_file
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc        27 Jan 14 15:04 wrapper_checkpoint.txt
[2026-01-14 15:04:43] -rw------- 1 boinc boinc      5338 Jan 14 15:04 pilotlog.txt
[2026-01-14 15:04:43] -rw------- 1 boinc boinc    551464 Jan 14 15:04 log.48215263._016358.job.log.1
[2026-01-14 15:04:43] -rw------- 1 boinc boinc       357 Jan 14 15:04 output.list
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc       620 Jan 14 15:04 runtime_log
[2026-01-14 15:04:43] -rw------- 1 boinc boinc    880640 Jan 14 15:04 result.tar.gz
[2026-01-14 15:04:43] -rw------- 1 boinc boinc       638 Jan 14 15:04 WTaMDmtR8z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtTqKDm1MCPmn.diag
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc      8760 Jan 14 15:04 runtime_log.err
[2026-01-14 15:04:43] -rw-r--r-- 1 boinc boinc     21670 Jan 14 15:04 stderr.txt
[2026-01-14 15:04:44] HITS file was successfully produced:
[2026-01-14 15:04:44] -rw------- 1 boinc boinc 157042973 Jan 14 15:03 shared/HITS.pool.root.1
[2026-01-14 15:04:44]  *** Contents of shared directory: ***
[2026-01-14 15:04:44] total 743908
[2026-01-14 15:04:44] -rw-r--r-- 2 boinc boinc 603216868 Jan 14 14:02 ATLAS.root_0
[2026-01-14 15:04:44] -rw-r--r-- 2 boinc boinc    592396 Jan 14 14:02 input.tar.gz
[2026-01-14 15:04:44] -rw-r--r-- 2 boinc boinc     15847 Jan 14 14:02 start_atlas.sh
[2026-01-14 15:04:44] -rw------- 1 boinc boinc 157042973 Jan 14 15:03 HITS.pool.root.1
[2026-01-14 15:04:44] -rw------- 1 boinc boinc    880640 Jan 14 15:04 result.tar.gz
15:04:45 (170082): run_atlas exited; CPU time 26583.073845
15:04:45 (170082): called boinc_finish(0)

</stderr_txt>
]]>

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