Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:43:15 (1908244): wrapper (7.7.26015): starting
08:43:15 (1908244): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 08:43:15] Arguments: --nthreads 8
[2026-01-14 08:43:15] Threads: 8
[2026-01-14 08:43:15] Checking for CVMFS
[2026-01-14 08:43:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 08:43:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 08:43:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 08:43:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 08:43:16] 2.13.3.0 12348 100686 406500 155133 2 424 27079783 32935936 20145 16776704 0 356978465 99.486 471475754 34504 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 08:43:16] CVMFS is ok
[2026-01-14 08:43:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 08:43:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 08:43:16] Further information can be found at the LHC@home message board.
[2026-01-14 08:43:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 08:43:16] Checking for apptainer binary...
[2026-01-14 08:43:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 08:43:16] Running /usr/bin/apptainer --version
[2026-01-14 08:43:16] apptainer version 1.4.5-2.el9
[2026-01-14 08:43:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 08:43:16] c6-12-27-2.aglt2.org
[2026-01-14 08:43:16] apptainer works
[2026-01-14 08:43:16] Set ATHENA_PROC_NUMBER=8
[2026-01-14 08:43:16] Set ATHENA_CORE_NUMBER=8
[2026-01-14 08:43:16] Starting ATLAS job with PandaID=6969156570
[2026-01-14 08:43:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 11:34:50]  *** The last 200 lines of the pilot log: ***
[2026-01-14 11:34:50] 2026-01-14 16:33:39,496 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 11:34:50] 2026-01-14 16:33:39,544 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2737.0621250000004
[2026-01-14 11:34:50] 2026-01-14 16:33:39,623 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969156570/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 11:34:50] 2026-01-14 16:33:39,627 | INFO     | extracted standard info from prmon json
[2026-01-14 11:34:50] 2026-01-14 16:33:39,628 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 11:34:50] 2026-01-14 16:33:39,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 11:34:50] 2026-01-14 16:33:39,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 11:34:50] 2026-01-14 16:33:39,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 11:34:50] 2026-01-14 16:33:39,661 | INFO     | fitting pss+swap vs Time
[2026-01-14 11:34:50] 2026-01-14 16:33:39,662 | INFO     | sum of square deviations: 1444193431.6167617
[2026-01-14 11:34:50] 2026-01-14 16:33:39,662 | INFO     | sum of deviations: 18146056525.401203
[2026-01-14 11:34:50] 2026-01-14 16:33:39,663 | INFO     | mean x: 1768403294.0479043
[2026-01-14 11:34:50] 2026-01-14 16:33:39,663 | INFO     | mean y: 2542791.5748502994
[2026-01-14 11:34:50] 2026-01-14 16:33:39,663 | INFO     | intersect: -22217158136.97389
[2026-01-14 11:34:50] 2026-01-14 16:33:39,663 | INFO     | chi2: 2.382875653147681
[2026-01-14 11:34:50] 2026-01-14 16:33:39,663 | INFO     | sum of square deviations: 1318313678.1975265
[2026-01-14 11:34:50] 2026-01-14 16:33:39,690 | INFO     | sum of deviations: 28851201408.617294
[2026-01-14 11:34:50] 2026-01-14 16:33:39,690 | INFO     | mean x: 1768403141.5432098
[2026-01-14 11:34:50] 2026-01-14 16:33:39,690 | INFO     | mean y: 2555421.6975308643
[2026-01-14 11:34:50] 2026-01-14 16:33:39,690 | INFO     | intersect: -38698821991.0385
[2026-01-14 11:34:50] 2026-01-14 16:33:39,690 | INFO     | chi2: 1.5936572596911565
[2026-01-14 11:34:50] 2026-01-14 16:33:39,691 | INFO     | current chi2=1.5936572596911565 (change=33.120418701412284 %)
[2026-01-14 11:34:50] 2026-01-14 16:33:39,691 | INFO     | sum of square deviations: 1199978710.687902
[2026-01-14 11:34:50] 2026-01-14 16:33:39,692 | INFO     | sum of deviations: 27800303042.66242
[2026-01-14 11:34:50] 2026-01-14 16:33:39,692 | INFO     | mean x: 1768402989.044586
[2026-01-14 11:34:50] 2026-01-14 16:33:39,692 | INFO     | mean y: 2554067.1910828026
[2026-01-14 11:34:50] 2026-01-14 16:33:39,692 | INFO     | intersect: -40966621934.945435
[2026-01-14 11:34:50] 2026-01-14 16:33:39,692 | INFO     | chi2: 1.5950412567962142
[2026-01-14 11:34:50] 2026-01-14 16:33:39,692 | INFO     | current chi2=1.5950412567962142 (change=-0.0868440875000926 %)
[2026-01-14 11:34:50] 2026-01-14 16:33:39,693 | INFO     | right removable region: 156
[2026-01-14 11:34:50] 2026-01-14 16:33:39,714 | INFO     | sum of square deviations: 1318318864.1049392
[2026-01-14 11:34:50] 2026-01-14 16:33:39,715 | INFO     | sum of deviations: -10483716423.858027
[2026-01-14 11:34:50] 2026-01-14 16:33:39,715 | INFO     | mean x: 1768403446.5493827
[2026-01-14 11:34:50] 2026-01-14 16:33:39,716 | INFO     | mean y: 2577070.9197530863
[2026-01-14 11:34:50] 2026-01-14 16:33:39,716 | INFO     | intersect: 14065517958.277905
[2026-01-14 11:34:50] 2026-01-14 16:33:39,716 | INFO     | chi2: 0.841778321554738
[2026-01-14 11:34:50] 2026-01-14 16:33:39,716 | INFO     | current chi2=0.841778321554738 (change=64.67384605475391 %)
[2026-01-14 11:34:50] 2026-01-14 16:33:39,716 | INFO     | sum of square deviations: 1199979321.5923624
[2026-01-14 11:34:50] 2026-01-14 16:33:39,717 | INFO     | sum of deviations: -11531482477.235672
[2026-01-14 11:34:50] 2026-01-14 16:33:39,717 | INFO     | mean x: 1768403599.0509553
[2026-01-14 11:34:50] 2026-01-14 16:33:39,717 | INFO     | mean y: 2578360.9044585987
[2026-01-14 11:34:50] 2026-01-14 16:33:39,718 | INFO     | intersect: 16996467128.98436
[2026-01-14 11:34:50] 2026-01-14 16:33:39,739 | INFO     | chi2: 0.8270497273496141
[2026-01-14 11:34:50] 2026-01-14 16:33:39,739 | INFO     | current chi2=0.8270497273496141 (change=1.749699870854431 %)
[2026-01-14 11:34:50] 2026-01-14 16:33:39,739 | INFO     | left removable region: 20
[2026-01-14 11:34:50] 2026-01-14 16:33:39,740 | INFO     | sum of square deviations: 779980411.735295
[2026-01-14 11:34:50] 2026-01-14 16:33:39,740 | INFO     | sum of deviations: 2166371356.749997
[2026-01-14 11:34:50] 2026-01-14 16:33:39,741 | INFO     | mean x: 1768403568.5441177
[2026-01-14 11:34:50] 2026-01-14 16:33:39,741 | INFO     | mean y: 2588032.125
[2026-01-14 11:34:50] 2026-01-14 16:33:39,741 | INFO     | intersect: -4909097928.738085
[2026-01-14 11:34:50] 2026-01-14 16:33:39,741 | INFO     | chi2: 0.0024355610640834162
[2026-01-14 11:34:50] 2026-01-14 16:33:39,741 | INFO     | current memory leak: 2.78 B/s (using 136 data points, chi2=0.00)
[2026-01-14 11:34:50] 2026-01-14 16:33:39,758 | INFO     | could have reported an average CPU frequency of 2783 MHz (9 samples)
[2026-01-14 11:34:50] 2026-01-14 16:33:39,758 | INFO     | ..............................
[2026-01-14 11:34:50] 2026-01-14 16:33:39,758 | INFO     | . Timing measurements:
[2026-01-14 11:34:50] 2026-01-14 16:33:39,758 | INFO     | . get job = 0 s
[2026-01-14 11:34:50] 2026-01-14 16:33:39,758 | INFO     | . initial setup = 2 s
[2026-01-14 11:34:50] 2026-01-14 16:33:39,758 | INFO     | . payload setup = 5 s
[2026-01-14 11:34:50] 2026-01-14 16:33:39,759 | INFO     | . stage-in = 0 s
[2026-01-14 11:34:50] 2026-01-14 16:33:39,759 | INFO     | . payload execution = 10150 s
[2026-01-14 11:34:50] 2026-01-14 16:33:39,759 | INFO     | . stage-out = 4 s
[2026-01-14 11:34:50] 2026-01-14 16:33:39,759 | INFO     | . log creation = 0 s
[2026-01-14 11:34:50] 2026-01-14 16:33:39,759 | INFO     | ..............................
[2026-01-14 11:34:50] 2026-01-14 16:33:40,283 | INFO     | 
[2026-01-14 11:34:50] 2026-01-14 16:33:40,283 | INFO     | job summary report
[2026-01-14 11:34:50] 2026-01-14 16:33:40,283 | INFO     | --------------------------------------------------
[2026-01-14 11:34:50] 2026-01-14 16:33:40,283 | INFO     | PanDA job id: 6969156570
[2026-01-14 11:34:50] 2026-01-14 16:33:40,283 | INFO     | task id: 48213205
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | errors: (none)
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | pilot state: finished 
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | transexitcode: 0
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | exeerrorcode: 0
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | exeerrordiag: 
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | exitcode: 0
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | exitmsg: OK
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | cpuconsumptiontime: 57979 s
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | nevents: 400
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | neventsw: 0
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | pid: 1925790
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | pgrp: 1925790
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | corecount: 8
[2026-01-14 11:34:50] 2026-01-14 16:33:40,284 | INFO     | event service: False
[2026-01-14 11:34:50] 2026-01-14 16:33:40,285 | INFO     | sizes: {0: 2284132, 4: 2284394, 11: 2284422, 10160: 2313469, 10161: 2313468, 10167: 2322706, 10198: 2322908}
[2026-01-14 11:34:50] 2026-01-14 16:33:40,285 | INFO     | --------------------------------------------------
[2026-01-14 11:34:50] 2026-01-14 16:33:40,285 | INFO     | 
[2026-01-14 11:34:50] 2026-01-14 16:33:40,285 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 11:34:50] 2026-01-14 16:33:40,489 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,491 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 11:34:50] 2026-01-14 16:33:40,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,491 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 11:34:50] 2026-01-14 16:33:40,491 | INFO     | job 6969156570 has completed (purged errors)
[2026-01-14 11:34:50] 2026-01-14 16:33:40,491 | INFO     | overall cleanup function is called
[2026-01-14 11:34:50] 2026-01-14 16:33:41,666 | INFO     | --- collectZombieJob: --- 10, [1925790]
[2026-01-14 11:34:50] 2026-01-14 16:33:41,666 | INFO     | zombie collector waiting for pid 1925790
[2026-01-14 11:34:50] 2026-01-14 16:33:41,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 11:34:50] 2026-01-14 16:33:41,666 | INFO     | collected zombie processes
[2026-01-14 11:34:50] 2026-01-14 16:33:41,666 | INFO     | will attempt to kill all subprocesses of pid=1925790
[2026-01-14 11:34:50] 2026-01-14 16:33:43,131 | INFO     | PID=1919029 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 11:34:50] 2026-01-14 16:33:43,132 | INFO     | .. there are 28 such processes running
[2026-01-14 11:34:50] 2026-01-14 16:33:43,205 | INFO     | process IDs to be killed: [1925790] (in reverse order)
[2026-01-14 11:34:50] 2026-01-14 16:33:43,398 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 11:34:50] 2026-01-14 16:33:43,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 11:34:50] 2026-01-14 16:33:43,430 | INFO     | did not find any defunct processes belonging to 1925790
[2026-01-14 11:34:50] 2026-01-14 16:33:43,449 | INFO     | did not find any defunct processes belonging to 1925790
[2026-01-14 11:34:50] 2026-01-14 16:33:43,449 | INFO     | ready for new job
[2026-01-14 11:34:50] 2026-01-14 16:33:43,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 11:34:50] 2026-01-14 16:33:43,451 | INFO     | ***************************************
[2026-01-14 11:34:50] 2026-01-14 16:33:43,451 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 11:34:50] 2026-01-14 16:33:43,451 | INFO     | ***************************************
[2026-01-14 11:34:50] 2026-01-14 16:33:43,451 | INFO     | 
[2026-01-14 11:34:50] 2026-01-14 16:33:43,456 | INFO     | architecture information:
[2026-01-14 11:34:50] 2026-01-14 16:33:43,457 | INFO     | executing command: cat /etc/os-release
[2026-01-14 11:34:50] 2026-01-14 16:33:43,556 | INFO     | cat /etc/os-release:
[2026-01-14 11:34:50] NAME="CentOS Linux"
[2026-01-14 11:34:50] VERSION="7 (Core)"
[2026-01-14 11:34:50] ID="centos"
[2026-01-14 11:34:50] ID_LIKE="rhel fedora"
[2026-01-14 11:34:50] VERSION_ID="7"
[2026-01-14 11:34:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 11:34:50] ANSI_COLOR="0;31"
[2026-01-14 11:34:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 11:34:50] HOME_URL="https://www.centos.org/"
[2026-01-14 11:34:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 11:34:50] 
[2026-01-14 11:34:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 11:34:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 11:34:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 11:34:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 11:34:50] 
[2026-01-14 11:34:50] 2026-01-14 16:33:43,556 | INFO     | ***************************************
[2026-01-14 11:34:50] 2026-01-14 16:33:44,060 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 11:34:50] 2026-01-14 16:33:44,213 | INFO     | sufficient remaining disk space (86265298944 B)
[2026-01-14 11:34:50] 2026-01-14 16:33:44,213 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 11:34:50] 2026-01-14 16:33:44,214 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 11:34:50] 2026-01-14 16:33:44,214 | INFO     | update_server=False
[2026-01-14 11:34:50] 2026-01-14 16:33:44,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 11:34:50] 2026-01-14 16:33:44,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:34:50] 2026-01-14 16:33:44,270 | INFO     | aborting loop
[2026-01-14 11:34:50] 2026-01-14 16:33:44,458 | INFO     | all data control threads have been joined
[2026-01-14 11:34:50] 2026-01-14 16:33:44,712 | INFO     | all payload control threads have been joined
[2026-01-14 11:34:50] 2026-01-14 16:33:44,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 11:34:50] 2026-01-14 16:33:45,220 | INFO     | [job] retrieve thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:45,277 | INFO     | [job] job monitor thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:45,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:34:50] 2026-01-14 16:33:45,369 | INFO     | [job] validate thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:45,369 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:45,463 | INFO     | [data] control thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:45,718 | INFO     | [payload] control thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:45,756 | INFO     | [payload] validate_post thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:45,831 | INFO     | all job control threads have been joined
[2026-01-14 11:34:50] 2026-01-14 16:33:46,322 | INFO     | [job] queue monitor thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:46,327 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:46,327 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:46,347 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:46,363 | INFO     | [data] copytool_in thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:46,507 | INFO     | [payload] failed_post thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:46,817 | INFO     | [data] copytool_out thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:46,837 | INFO     | [job] control thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:33:46,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 11:34:50] 2026-01-14 16:33:50,918 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 11:34:50] 2026-01-14 16:34:18,636 | INFO     | PID=1919029 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 11:34:50] 2026-01-14 16:34:18,636 | INFO     | .. there are 28 such processes running
[2026-01-14 11:34:50] 2026-01-14 16:34:18,636 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 11:34:50] 2026-01-14 16:34:18,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 11:34:50] 2026-01-14 16:34:18,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 11:34:50] 2026-01-14 16:34:43,651 | INFO     | [monitor] cgroup control has ended
[2026-01-14 11:34:50] 2026-01-14 16:34:43,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139784159766336)>', '<ExcThread(monitor, started 139783527458560)>']
[2026-01-14 11:34:50] 2026-01-14 16:34:43,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 11:34:50] 2026-01-14 16:34:43,853 | INFO     | [monitor] control thread has ended
[2026-01-14 11:34:50] 2026-01-14 16:34:48,825 | INFO     | all workflow threads have been joined
[2026-01-14 11:34:50] 2026-01-14 16:34:48,825 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 11:34:50] 2026-01-14 16:34:48,825 | INFO     | traces error code: 0
[2026-01-14 11:34:50] 2026-01-14 16:34:48,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 11:34:50] 2026-01-14 16:34:49,148 [wrapper] ==== pilot stdout END ====
[2026-01-14 11:34:50] 2026-01-14 16:34:49,158 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 11:34:50] 2026-01-14 16:34:49,173 [wrapper] pilotpid: 1919029
[2026-01-14 11:34:50] 2026-01-14 16:34:49,185 [wrapper] Pilot exit status: 0
[2026-01-14 11:34:50] 2026-01-14 16:34:49,296 [wrapper] pandaids: 6969156570
[2026-01-14 11:34:50] 2026-01-14 16:34:50,756 [wrapper] cleanup supervisor_pilot 2894213 1919030
[2026-01-14 11:34:50] 2026-01-14 16:34:50,768 [wrapper] Test setup, not cleaning
[2026-01-14 11:34:50] 2026-01-14 16:34:50,811 [wrapper] apfmon messages muted
[2026-01-14 11:34:50] 2026-01-14 16:34:50,823 [wrapper] ==== wrapper stdout END ====
[2026-01-14 11:34:50] 2026-01-14 16:34:50,838 [wrapper] ==== wrapper stderr END ====
[2026-01-14 11:34:50]  *** Error codes and diagnostics ***
[2026-01-14 11:34:50]     "exeErrorCode": 0,
[2026-01-14 11:34:50]     "exeErrorDiag": "",
[2026-01-14 11:34:50]     "pilotErrorCode": 0,
[2026-01-14 11:34:50]     "pilotErrorDiag": "",
[2026-01-14 11:34:50]  *** Listing of results directory ***
[2026-01-14 11:34:50] total 596264
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 15:40 pilot3.tar.gz
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 15:48 queuedata.json
[2026-01-14 11:34:50] -rwx------. 1 boincer umatlas     36322 Jan 13 15:49 runpilot2-wrapper.sh
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas       100 Jan 14 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 11:34:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 08:43 run_atlas
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas       105 Jan 14 08:43 job.xml
[2026-01-14 11:34:50] -rw-r--r--. 2 boincer umatlas 320475498 Jan 14 08:43 EVNT.48213202._000002.pool.root.1
[2026-01-14 11:34:50] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 08:43 start_atlas.sh
[2026-01-14 11:34:50] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 08:43 shared
[2026-01-14 11:34:50] -rw-r--r--. 2 boincer umatlas    592418 Jan 14 08:43 input.tar.gz
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas         0 Jan 14 08:43 boinc_lockfile
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas      2638 Jan 14 08:43 pandaJob.out
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas        57 Jan 14 08:43 setup.sh.local
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas    997566 Jan 14 08:43 agis_schedconf.cvmfs.json
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas   1516246 Jan 14 08:43 agis_ddmendpoints.agis.ALL.json
[2026-01-14 11:34:50] drwx------. 5 boincer umatlas      4096 Jan 14 08:43 pilot3
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas      6877 Jan 14 11:27 init_data.xml
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas 282478675 Jan 14 11:31 HITS.48213205._000039.pool.root.1
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas       530 Jan 14 11:31 boinc_task_state.xml
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas      1044 Jan 14 11:32 memory_monitor_summary.json
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas    452627 Jan 14 11:33 log.48213205._000039.job.log.tgz.1
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas        95 Jan 14 11:33 pilot_heartbeat.json
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas      7832 Jan 14 11:33 heartbeat.json
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 11:34 boinc_mmap_file
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas        27 Jan 14 11:34 wrapper_checkpoint.txt
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas      4824 Jan 14 11:34 pilotlog.txt
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas   1393364 Jan 14 11:34 log.48213205._000039.job.log.1
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas       357 Jan 14 11:34 output.list
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas       620 Jan 14 11:34 runtime_log
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas   1863680 Jan 14 11:34 result.tar.gz
[2026-01-14 11:34:50] -rw-------. 1 boincer umatlas       657 Jan 14 11:34 WDYKDmMV0z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgAoKDmn5RNCo.diag
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas      9353 Jan 14 11:34 runtime_log.err
[2026-01-14 11:34:50] -rw-r--r--. 1 boincer umatlas     21255 Jan 14 11:34 stderr.txt
[2026-01-14 11:34:51] HITS file was successfully produced:
[2026-01-14 11:34:51] -rw-------. 1 boincer umatlas 282478675 Jan 14 11:31 shared/HITS.pool.root.1
[2026-01-14 11:34:51]  *** Contents of shared directory: ***
[2026-01-14 11:34:51] total 591252
[2026-01-14 11:34:51] -rw-r--r--. 2 boincer umatlas 320475498 Jan 14 08:43 ATLAS.root_0
[2026-01-14 11:34:51] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 08:43 start_atlas.sh
[2026-01-14 11:34:51] -rw-r--r--. 2 boincer umatlas    592418 Jan 14 08:43 input.tar.gz
[2026-01-14 11:34:51] -rw-------. 1 boincer umatlas 282478675 Jan 14 11:31 HITS.pool.root.1
[2026-01-14 11:34:51] -rw-------. 1 boincer umatlas   1863680 Jan 14 11:34 result.tar.gz
11:34:52 (1908244): run_atlas exited; CPU time 58416.791948
11:34:52 (1908244): called boinc_finish(0)

</stderr_txt>
]]>

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