Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:53 (3057): wrapper (7.7.26015): starting
08:21:53 (3057): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 08:21:53] Arguments: --nthreads 12
[2026-01-14 08:21:53] Threads: 12
[2026-01-14 08:21:53] Checking for CVMFS
[2026-01-14 08:21:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 08:21:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 08:21:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 08:21:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 08:21:53] 2.11.2.0 2916 358249 101480 155133 0 56 17331077 20275200 1 130560 1 150360010 99.944 22181487 17020 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 08:21:53] CVMFS is ok
[2026-01-14 08:21:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 08:21:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 08:21:53] Further information can be found at the LHC@home message board.
[2026-01-14 08:21:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 08:21:53] Checking for apptainer binary...
[2026-01-14 08:21:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 08:21:53] Running /usr/bin/apptainer --version
[2026-01-14 08:21:53] apptainer version 1.3.2-1.el7
[2026-01-14 08:21:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 08:21:55] c-205-23.aglt2.org
[2026-01-14 08:21:55] apptainer works
[2026-01-14 08:21:55] Set ATHENA_PROC_NUMBER=12
[2026-01-14 08:21:55] Set ATHENA_CORE_NUMBER=12
[2026-01-14 08:21:55] Starting ATLAS job with PandaID=6969359021
[2026-01-14 08:21:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 09:11:27]  *** The last 200 lines of the pilot log: ***
[2026-01-14 09:11:27]  storage_token=
[2026-01-14 09:11:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969359021/log.48215263._015951.job.log.tgz.1
[2026-01-14 09:11:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/3b/log.48215263._015951.job.log.tgz.1
[2026-01-14 09:11:27]  workdir=None
[2026-01-14 09:11:27] ]
[2026-01-14 09:11:27] 2026-01-14 14:10:44,705 | INFO     | transferring file log.48215263._015951.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969359021/log.48215263._015951.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 09:11:27] 2026-01-14 14:10:44,705 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969359021/log.48215263._015951.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._015951.job
[2026-01-14 09:11:27] 2026-01-14 14:10:44,728 | INFO     | adding to output.list: log.48215263._015951.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/3b/log.48215263._015951.job.log.tg
[2026-01-14 09:11:27] 2026-01-14 14:10:44,729 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 09:11:27] 2026-01-14 14:10:44,729 | INFO     | summary of transferred files:
[2026-01-14 09:11:27] 2026-01-14 14:10:44,730 | INFO     |  -- lfn=log.48215263._015951.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 09:11:27] 2026-01-14 14:10:44,730 | INFO     | stage-out finished correctly
[2026-01-14 09:11:27] 2026-01-14 14:10:45,705 | INFO     | time since job start (2915s) is within the limit (349056.0s)
[2026-01-14 09:11:27] 2026-01-14 14:10:45,724 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 09:11:27] 2026-01-14 14:10:45,885 | INFO     | monitor loop #220: job 0:6969359021 is in state 'finished'
[2026-01-14 09:11:27] 2026-01-14 14:10:45,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 09:11:27] 2026-01-14 14:10:47,711 | INFO     | time since job start (2917s) is within the limit (349056.0s)
[2026-01-14 09:11:27] 2026-01-14 14:10:48,388 | INFO     | monitor loop #221: job 0:6969359021 is in state 'finished'
[2026-01-14 09:11:27] 2026-01-14 14:10:48,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 09:11:27] 2026-01-14 14:10:48,617 | INFO     | job 6969359021 has state=finished
[2026-01-14 09:11:27] 2026-01-14 14:10:48,617 | INFO     | preparing for final server update for job 6969359021 in state='finished'
[2026-01-14 09:11:27] 2026-01-14 14:10:48,673 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-14 09:11:27] 2026-01-14 14:10:48,674 | INFO     | this job has now completed (state=finished)
[2026-01-14 09:11:27] 2026-01-14 14:10:48,674 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 09:11:27] 2026-01-14 14:10:48,674 | INFO     | log transfer has been attempted: DONE
[2026-01-14 09:11:27] 2026-01-14 14:10:48,674 | INFO     | job 6969359021 has finished - writing final server update
[2026-01-14 09:11:27] 2026-01-14 14:10:48,674 | INFO     | total number of processed events: 400 (read)
[2026-01-14 09:11:27] 2026-01-14 14:10:48,675 | INFO     | executing command: lscpu
[2026-01-14 09:11:27] 2026-01-14 14:10:48,700 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 09:11:27] 2026-01-14 14:10:49,717 | INFO     | time since job start (2919s) is within the limit (349056.0s)
[2026-01-14 09:11:27] 2026-01-14 14:10:49,718 | INFO     | 2921s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-14 09:11:27] 2026-01-14 14:10:50,844 | INFO     | PID=6824 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 09:11:27] 2026-01-14 14:10:50,892 | INFO     | monitor loop #222: job 0:6969359021 is in state 'finished'
[2026-01-14 09:11:27] 2026-01-14 14:10:50,892 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 09:11:27] 2026-01-14 14:10:51,845 | INFO     | time since job start (2921s) is within the limit (349056.0s)
[2026-01-14 09:11:27] 2026-01-14 14:10:53,395 | INFO     | monitor loop #223: job 0:6969359021 is in state 'finished'
[2026-01-14 09:11:27] 2026-01-14 14:10:53,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 09:11:27] 2026-01-14 14:10:53,847 | INFO     | time since job start (2923s) is within the limit (349056.0s)
[2026-01-14 09:11:27] 2026-01-14 14:10:54,213 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 09:11:27] 2026-01-14 14:10:54,217 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2026-01-14 09:11:27] 2026-01-14 14:10:54,220 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969359021/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 09:11:27] 2026-01-14 14:10:54,220 | INFO     | extracted standard info from prmon json
[2026-01-14 09:11:27] 2026-01-14 14:10:54,220 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 09:11:27] 2026-01-14 14:10:54,220 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 09:11:27] 2026-01-14 14:10:54,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 09:11:27] 2026-01-14 14:10:54,221 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 09:11:27] 2026-01-14 14:10:54,222 | INFO     | fitting pss+swap vs Time
[2026-01-14 09:11:27] 2026-01-14 14:10:54,222 | INFO     | sum of square deviations: 21358540.0
[2026-01-14 09:11:27] 2026-01-14 14:10:54,222 | INFO     | sum of deviations: 469298864.0
[2026-01-14 09:11:27] 2026-01-14 14:10:54,222 | INFO     | mean x: 1768398484.0
[2026-01-14 09:11:27] 2026-01-14 14:10:54,222 | INFO     | mean y: 3008636.9024390243
[2026-01-14 09:11:27] 2026-01-14 14:10:54,222 | INFO     | intersect: -38852989930.43982
[2026-01-14 09:11:27] 2026-01-14 14:10:54,223 | INFO     | chi2: 0.0011244064840997493
[2026-01-14 09:11:27] 2026-01-14 14:10:54,223 | INFO     | current memory leak: 21.97 B/s (using 41 data points, chi2=0.00)
[2026-01-14 09:11:27] 2026-01-14 14:10:54,223 | INFO     | could have reported an average CPU frequency of 1924 MHz (5 samples)
[2026-01-14 09:11:27] 2026-01-14 14:10:54,223 | INFO     | ..............................
[2026-01-14 09:11:27] 2026-01-14 14:10:54,223 | INFO     | . Timing measurements:
[2026-01-14 09:11:27] 2026-01-14 14:10:54,223 | INFO     | . get job = 0 s
[2026-01-14 09:11:27] 2026-01-14 14:10:54,224 | INFO     | . initial setup = 2 s
[2026-01-14 09:11:27] 2026-01-14 14:10:54,224 | INFO     | . payload setup = 7 s
[2026-01-14 09:11:27] 2026-01-14 14:10:54,224 | INFO     | . stage-in = 0 s
[2026-01-14 09:11:27] 2026-01-14 14:10:54,224 | INFO     | . payload execution = 2886 s
[2026-01-14 09:11:27] 2026-01-14 14:10:54,224 | INFO     | . stage-out = 0 s
[2026-01-14 09:11:27] 2026-01-14 14:10:54,224 | INFO     | . log creation = 0 s
[2026-01-14 09:11:27] 2026-01-14 14:10:54,224 | INFO     | ..............................
[2026-01-14 09:11:27] 2026-01-14 14:10:54,777 | INFO     | 
[2026-01-14 09:11:27] 2026-01-14 14:10:54,777 | INFO     | job summary report
[2026-01-14 09:11:27] 2026-01-14 14:10:54,777 | INFO     | --------------------------------------------------
[2026-01-14 09:11:27] 2026-01-14 14:10:54,778 | INFO     | PanDA job id: 6969359021
[2026-01-14 09:11:27] 2026-01-14 14:10:54,778 | INFO     | task id: 48215263
[2026-01-14 09:11:27] 2026-01-14 14:10:54,778 | INFO     | errors: (none)
[2026-01-14 09:11:27] 2026-01-14 14:10:54,778 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 09:11:27] 2026-01-14 14:10:54,778 | INFO     | pilot state: finished 
[2026-01-14 09:11:27] 2026-01-14 14:10:54,778 | INFO     | transexitcode: 0
[2026-01-14 09:11:27] 2026-01-14 14:10:54,778 | INFO     | exeerrorcode: 0
[2026-01-14 09:11:27] 2026-01-14 14:10:54,779 | INFO     | exeerrordiag: 
[2026-01-14 09:11:27] 2026-01-14 14:10:54,779 | INFO     | exitcode: 0
[2026-01-14 09:11:27] 2026-01-14 14:10:54,779 | INFO     | exitmsg: OK
[2026-01-14 09:11:27] 2026-01-14 14:10:54,779 | INFO     | cpuconsumptiontime: 30384 s
[2026-01-14 09:11:27] 2026-01-14 14:10:54,779 | INFO     | nevents: 400
[2026-01-14 09:11:27] 2026-01-14 14:10:54,779 | INFO     | neventsw: 0
[2026-01-14 09:11:27] 2026-01-14 14:10:54,780 | INFO     | pid: 13207
[2026-01-14 09:11:27] 2026-01-14 14:10:54,780 | INFO     | pgrp: 13207
[2026-01-14 09:11:27] 2026-01-14 14:10:54,780 | INFO     | corecount: 12
[2026-01-14 09:11:27] 2026-01-14 14:10:54,780 | INFO     | event service: False
[2026-01-14 09:11:27] 2026-01-14 14:10:54,780 | INFO     | sizes: {0: 2283942, 5: 2284204, 11: 2284260, 2897: 2309554, 2898: 2318552, 2899: 2318608, 2907: 2318962}
[2026-01-14 09:11:27] 2026-01-14 14:10:54,780 | INFO     | --------------------------------------------------
[2026-01-14 09:11:27] 2026-01-14 14:10:54,780 | INFO     | 
[2026-01-14 09:11:27] 2026-01-14 14:10:54,780 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 09:11:27] 2026-01-14 14:10:54,802 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,802 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,802 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,802 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,805 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 09:11:27] 2026-01-14 14:10:54,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,805 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 09:11:27] 2026-01-14 14:10:54,805 | INFO     | job 6969359021 has completed (purged errors)
[2026-01-14 09:11:27] 2026-01-14 14:10:54,805 | INFO     | overall cleanup function is called
[2026-01-14 09:11:27] 2026-01-14 14:10:55,814 | INFO     | --- collectZombieJob: --- 10, [13207]
[2026-01-14 09:11:27] 2026-01-14 14:10:55,814 | INFO     | zombie collector waiting for pid 13207
[2026-01-14 09:11:27] 2026-01-14 14:10:55,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 09:11:27] 2026-01-14 14:10:55,814 | INFO     | collected zombie processes
[2026-01-14 09:11:27] 2026-01-14 14:10:55,814 | INFO     | will attempt to kill all subprocesses of pid=13207
[2026-01-14 09:11:27] 2026-01-14 14:10:55,906 | INFO     | process IDs to be killed: [13207] (in reverse order)
[2026-01-14 09:11:27] 2026-01-14 14:10:55,955 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 09:11:27] 2026-01-14 14:10:55,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 09:11:27] 2026-01-14 14:10:55,959 | INFO     | did not find any defunct processes belonging to 13207
[2026-01-14 09:11:27] 2026-01-14 14:10:55,961 | INFO     | did not find any defunct processes belonging to 13207
[2026-01-14 09:11:27] 2026-01-14 14:10:55,962 | INFO     | ready for new job
[2026-01-14 09:11:27] 2026-01-14 14:10:55,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 09:11:27] 2026-01-14 14:10:55,963 | INFO     | ***************************************
[2026-01-14 09:11:27] 2026-01-14 14:10:55,963 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 09:11:27] 2026-01-14 14:10:55,963 | INFO     | ***************************************
[2026-01-14 09:11:27] 2026-01-14 14:10:55,963 | INFO     | 
[2026-01-14 09:11:27] 2026-01-14 14:10:55,964 | INFO     | architecture information:
[2026-01-14 09:11:27] 2026-01-14 14:10:55,964 | INFO     | executing command: cat /etc/os-release
[2026-01-14 09:11:27] 2026-01-14 14:10:55,979 | INFO     | cat /etc/os-release:
[2026-01-14 09:11:27] NAME="CentOS Linux"
[2026-01-14 09:11:27] VERSION="7 (Core)"
[2026-01-14 09:11:27] ID="centos"
[2026-01-14 09:11:27] ID_LIKE="rhel fedora"
[2026-01-14 09:11:27] VERSION_ID="7"
[2026-01-14 09:11:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 09:11:27] ANSI_COLOR="0;31"
[2026-01-14 09:11:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 09:11:27] HOME_URL="https://www.centos.org/"
[2026-01-14 09:11:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 09:11:27] 
[2026-01-14 09:11:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 09:11:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 09:11:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 09:11:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 09:11:27] 
[2026-01-14 09:11:27] 2026-01-14 14:10:55,979 | INFO     | ***************************************
[2026-01-14 09:11:27] 2026-01-14 14:10:56,482 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 09:11:27] 2026-01-14 14:10:56,498 | INFO     | sufficient remaining disk space (28638707712 B)
[2026-01-14 09:11:27] 2026-01-14 14:10:56,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 09:11:27] 2026-01-14 14:10:56,499 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 09:11:27] 2026-01-14 14:10:56,499 | INFO     | update_server=False
[2026-01-14 09:11:27] 2026-01-14 14:10:56,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 09:11:27] 2026-01-14 14:10:56,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 09:11:27] 2026-01-14 14:10:56,658 | INFO     | all data control threads have been joined
[2026-01-14 09:11:27] 2026-01-14 14:10:56,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 09:11:27] 2026-01-14 14:10:56,903 | INFO     | aborting loop
[2026-01-14 09:11:27] 2026-01-14 14:10:57,254 | INFO     | all payload control threads have been joined
[2026-01-14 09:11:27] 2026-01-14 14:10:57,504 | INFO     | [job] retrieve thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:57,532 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:57,663 | INFO     | [data] control thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:57,685 | INFO     | [payload] validate_post thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:57,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 09:11:27] 2026-01-14 14:10:57,909 | INFO     | [job] job monitor thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:58,100 | INFO     | all job control threads have been joined
[2026-01-14 09:11:27] 2026-01-14 14:10:58,132 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:58,205 | INFO     | [payload] failed_post thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:58,259 | INFO     | [payload] control thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:58,277 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:58,285 | INFO     | [data] copytool_in thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:58,880 | INFO     | [job] validate thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:59,106 | INFO     | [job] control thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:10:59,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 09:11:27] 2026-01-14 14:10:59,834 | INFO     | [data] copytool_out thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:11:00,319 | INFO     | [job] queue monitor thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:11:00,505 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:11:06,803 | INFO     | job.realtimelogging is not enabled
[2026-01-14 09:11:27] 2026-01-14 14:11:07,808 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 09:11:27] 2026-01-14 14:11:14,232 | INFO     | [monitor] cgroup control has ended
[2026-01-14 09:11:27] 2026-01-14 14:11:14,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538548639552)>', '<ExcThread(monitor, started 140537235502848)>']
[2026-01-14 09:11:27] 2026-01-14 14:11:19,797 | INFO     | all workflow threads have been joined
[2026-01-14 09:11:27] 2026-01-14 14:11:19,797 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 09:11:27] 2026-01-14 14:11:19,798 | INFO     | traces error code: 0
[2026-01-14 09:11:27] 2026-01-14 14:11:19,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 09:11:27] 2026-01-14 14:11:27,042 | INFO     | PID=6824 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 09:11:27] 2026-01-14 14:11:27,043 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 09:11:27] 2026-01-14 14:11:27,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 09:11:27] 2026-01-14 14:11:27,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 09:11:27] 2026-01-14 14:11:27,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 09:11:27] 2026-01-14 14:11:27,043 | INFO     | [monitor] control thread has ended
[2026-01-14 09:11:27] 2026-01-14 14:11:27,133 [wrapper] ==== pilot stdout END ====
[2026-01-14 09:11:27] 2026-01-14 14:11:27,137 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 09:11:27] 2026-01-14 14:11:27,140 [wrapper] pilotpid: 6824
[2026-01-14 09:11:27] 2026-01-14 14:11:27,144 [wrapper] Pilot exit status: 0
[2026-01-14 09:11:27] 2026-01-14 14:11:27,158 [wrapper] pandaids: 6969359021
[2026-01-14 09:11:27] 2026-01-14 14:11:27,196 [wrapper] cleanup supervisor_pilot 32220 6825
[2026-01-14 09:11:27] 2026-01-14 14:11:27,200 [wrapper] Test setup, not cleaning
[2026-01-14 09:11:27] 2026-01-14 14:11:27,204 [wrapper] apfmon messages muted
[2026-01-14 09:11:27] 2026-01-14 14:11:27,208 [wrapper] ==== wrapper stdout END ====
[2026-01-14 09:11:27] 2026-01-14 14:11:27,212 [wrapper] ==== wrapper stderr END ====
[2026-01-14 09:11:27]  *** Error codes and diagnostics ***
[2026-01-14 09:11:27]     "exeErrorCode": 0,
[2026-01-14 09:11:27]     "exeErrorDiag": "",
[2026-01-14 09:11:27]     "pilotErrorCode": 0,
[2026-01-14 09:11:27]     "pilotErrorDiag": "",
[2026-01-14 09:11:27]  *** Listing of results directory ***
[2026-01-14 09:11:27] total 733952
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 00:14 pilot3.tar.gz
[2026-01-14 09:11:27] -rwx------ 1 boincer umatlas     36322 Jan 14 00:15 runpilot2-wrapper.sh
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 00:17 queuedata.json
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas       100 Jan 14 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 09:11:27] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 08:21 run_atlas
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas       105 Jan 14 08:21 job.xml
[2026-01-14 09:11:27] -rw-r--r-- 2 boincer umatlas 593020694 Jan 14 08:21 EVNT.32794306._000639.pool.root.1
[2026-01-14 09:11:27] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 08:21 start_atlas.sh
[2026-01-14 09:11:27] drwxrwx--x 2 boincer umatlas      4096 Jan 14 08:21 shared
[2026-01-14 09:11:27] -rw-r--r-- 2 boincer umatlas    592396 Jan 14 08:21 input.tar.gz
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas         0 Jan 14 08:21 boinc_lockfile
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas      2503 Jan 14 08:21 pandaJob.out
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas        57 Jan 14 08:21 setup.sh.local
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas    997566 Jan 14 08:22 agis_schedconf.cvmfs.json
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas   1516246 Jan 14 08:22 agis_ddmendpoints.agis.ALL.json
[2026-01-14 09:11:27] drwx------ 5 boincer umatlas      4096 Jan 14 08:22 pilot3
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas 153040612 Jan 14 09:10 HITS.48215263._015951.pool.root.1
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas       530 Jan 14 09:10 boinc_task_state.xml
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas      5952 Jan 14 09:10 init_data.xml
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas      1043 Jan 14 09:10 memory_monitor_summary.json
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas    346193 Jan 14 09:10 log.48215263._015951.job.log.tgz.1
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas        95 Jan 14 09:10 pilot_heartbeat.json
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas      7839 Jan 14 09:10 heartbeat.json
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 09:11 boinc_mmap_file
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas        27 Jan 14 09:11 wrapper_checkpoint.txt
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas       744 Jan 14 09:11 pilotlog.txt
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas    444256 Jan 14 09:11 log.48215263._015951.job.log.1
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas       357 Jan 14 09:11 output.list
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas       620 Jan 14 09:11 runtime_log
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas    808960 Jan 14 09:11 result.tar.gz
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas      9344 Jan 14 09:11 runtime_log.err
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas       659 Jan 14 09:11 NQzNDmHP8z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmK7jKDm45qlUo.diag
[2026-01-14 09:11:27] -rw-r--r-- 1 boincer umatlas     22336 Jan 14 09:11 stderr.txt
[2026-01-14 09:11:27] HITS file was successfully produced:
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas 153040612 Jan 14 09:10 shared/HITS.pool.root.1
[2026-01-14 09:11:27]  *** Contents of shared directory: ***
[2026-01-14 09:11:27] total 729976
[2026-01-14 09:11:27] -rw-r--r-- 2 boincer umatlas 593020694 Jan 14 08:21 ATLAS.root_0
[2026-01-14 09:11:27] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 08:21 start_atlas.sh
[2026-01-14 09:11:27] -rw-r--r-- 2 boincer umatlas    592396 Jan 14 08:21 input.tar.gz
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas 153040612 Jan 14 09:10 HITS.pool.root.1
[2026-01-14 09:11:27] -rw------- 1 boincer umatlas    808960 Jan 14 09:11 result.tar.gz
09:11:29 (3057): run_atlas exited; CPU time 30365.390642
09:11:29 (3057): called boinc_finish(0)

</stderr_txt>
]]>

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