Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:16:15 (3628084): wrapper (7.7.26015): starting
08:16:15 (3628084): wrapper: running run_atlas (--nthreads 10)
[2026-01-14 08:16:15] Arguments: --nthreads 10
[2026-01-14 08:16:15] Threads: 10
[2026-01-14 08:16:15] Checking for CVMFS
[2026-01-14 08:16:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 08:16:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 08:16:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 08:16:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 08:16:15] 2.13.3.0 12161 100658 359592 155132 1 619 29353442 40960001 14329 16776704 0 269902383 99.545 321362367 37790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 08:16:15] CVMFS is ok
[2026-01-14 08:16:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 08:16:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 08:16:15] Further information can be found at the LHC@home message board.
[2026-01-14 08:16:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 08:16:15] Checking for apptainer binary...
[2026-01-14 08:16:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 08:16:15] Running /usr/bin/apptainer --version
[2026-01-14 08:16:15] apptainer version 1.4.5-2.el9
[2026-01-14 08:16:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 08:16:16] c6-5-7-1.aglt2.org
[2026-01-14 08:16:16] apptainer works
[2026-01-14 08:16:16] Set ATHENA_PROC_NUMBER=10
[2026-01-14 08:16:16] Set ATHENA_CORE_NUMBER=10
[2026-01-14 08:16:16] Starting ATLAS job with PandaID=6969345029
[2026-01-14 08:16:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 09:40:42]  *** The last 200 lines of the pilot log: ***
[2026-01-14 09:40:42] 2026-01-14 14:39:38,887 | INFO     | transferring file log.48215263._014720.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6969345029/log.48215263._014720.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 09:40:42] 2026-01-14 14:39:38,888 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6969345029/log.48215263._014720.job.log.tgz.1 /tmp/boinchome/slots/1/log.48215263._014720.job
[2026-01-14 09:40:42] 2026-01-14 14:39:38,989 | INFO     | adding to output.list: log.48215263._014720.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/da/log.48215263._014720.job.log.tg
[2026-01-14 09:40:42] 2026-01-14 14:39:38,990 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 09:40:42] 2026-01-14 14:39:38,990 | INFO     | summary of transferred files:
[2026-01-14 09:40:42] 2026-01-14 14:39:38,990 | INFO     |  -- lfn=log.48215263._014720.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 09:40:42] 2026-01-14 14:39:38,991 | INFO     | stage-out finished correctly
[2026-01-14 09:40:42] 2026-01-14 14:39:40,177 | INFO     | time since job start (4994s) is within the limit (349056.0s)
[2026-01-14 09:40:42] 2026-01-14 14:39:40,263 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 09:40:42] 2026-01-14 14:39:40,864 | INFO     | job 6969345029 has state=finished
[2026-01-14 09:40:42] 2026-01-14 14:39:40,864 | INFO     | preparing for final server update for job 6969345029 in state='finished'
[2026-01-14 09:40:42] 2026-01-14 14:39:40,865 | INFO     | this job has now completed (state=finished)
[2026-01-14 09:40:42] 2026-01-14 14:39:40,865 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 09:40:42] 2026-01-14 14:39:40,865 | INFO     | log transfer has been attempted: DONE
[2026-01-14 09:40:42] 2026-01-14 14:39:40,865 | INFO     | job 6969345029 has finished - writing final server update
[2026-01-14 09:40:42] 2026-01-14 14:39:40,866 | INFO     | total number of processed events: 400 (read)
[2026-01-14 09:40:42] 2026-01-14 14:39:40,868 | INFO     | executing command: lscpu
[2026-01-14 09:40:42] 2026-01-14 14:39:40,978 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 09:40:42] 2026-01-14 14:39:42,184 | INFO     | time since job start (4996s) is within the limit (349056.0s)
[2026-01-14 09:40:42] 2026-01-14 14:39:43,104 | WARNING  | process 3638593 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 09:40:42] 2026-01-14 14:39:43,104 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969345029/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 09:40:42] 2026-01-14 14:39:43,429 | INFO     | number of running child processes to parent process 3638593: 1
[2026-01-14 09:40:42] 2026-01-14 14:39:43,429 | INFO     | maximum number of monitored processes: 6
[2026-01-14 09:40:42] 2026-01-14 14:39:44,210 | INFO     | time since job start (4998s) is within the limit (349056.0s)
[2026-01-14 09:40:42] 2026-01-14 14:39:45,934 | INFO     | monitor loop #348: job 0:6969345029 is in state 'finished'
[2026-01-14 09:40:42] 2026-01-14 14:39:45,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 09:40:42] 2026-01-14 14:39:46,217 | INFO     | time since job start (5000s) is within the limit (349056.0s)
[2026-01-14 09:40:42] 2026-01-14 14:39:48,224 | INFO     | time since job start (5002s) is within the limit (349056.0s)
[2026-01-14 09:40:42] 2026-01-14 14:39:48,458 | INFO     | monitor loop #349: job 0:6969345029 is in state 'finished'
[2026-01-14 09:40:42] 2026-01-14 14:39:48,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 09:40:42] 2026-01-14 14:39:49,831 | INFO     | PID=3631756 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-14 09:40:42] 2026-01-14 14:39:49,831 | INFO     | .. there are 17 such processes running
[2026-01-14 09:40:42] 2026-01-14 14:39:50,832 | INFO     | time since job start (5004s) is within the limit (349056.0s)
[2026-01-14 09:40:42] 2026-01-14 14:39:50,969 | INFO     | monitor loop #350: job 0:6969345029 is in state 'finished'
[2026-01-14 09:40:42] 2026-01-14 14:39:50,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 09:40:42] 2026-01-14 14:39:52,838 | INFO     | time since job start (5006s) is within the limit (349056.0s)
[2026-01-14 09:40:42] 2026-01-14 14:39:53,483 | INFO     | monitor loop #351: job 0:6969345029 is in state 'finished'
[2026-01-14 09:40:42] 2026-01-14 14:39:53,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 09:40:42] 2026-01-14 14:39:54,045 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 09:40:42] 2026-01-14 14:39:54,052 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3001.1937499999995
[2026-01-14 09:40:42] 2026-01-14 14:39:54,061 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969345029/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 09:40:42] 2026-01-14 14:39:54,062 | INFO     | extracted standard info from prmon json
[2026-01-14 09:40:42] 2026-01-14 14:39:54,062 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 09:40:42] 2026-01-14 14:39:54,062 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 09:40:42] 2026-01-14 14:39:54,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 09:40:42] 2026-01-14 14:39:54,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 09:40:42] 2026-01-14 14:39:54,064 | INFO     | fitting pss+swap vs Time
[2026-01-14 09:40:42] 2026-01-14 14:39:54,064 | INFO     | sum of square deviations: 130793150.0
[2026-01-14 09:40:42] 2026-01-14 14:39:54,065 | INFO     | sum of deviations: -2257719067.9999995
[2026-01-14 09:40:42] 2026-01-14 14:39:54,065 | INFO     | mean x: 1768399174.0
[2026-01-14 09:40:42] 2026-01-14 14:39:54,065 | INFO     | mean y: 2705284.2666666666
[2026-01-14 09:40:42] 2026-01-14 14:39:54,065 | INFO     | intersect: 30528375282.8503
[2026-01-14 09:40:42] 2026-01-14 14:39:54,065 | INFO     | chi2: 0.03674513939483576
[2026-01-14 09:40:42] 2026-01-14 14:39:54,065 | INFO     | current memory leak: -17.26 B/s (using 75 data points, chi2=0.04)
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | could have reported an average CPU frequency of 3059 MHz (6 samples)
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | ..............................
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | . Timing measurements:
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | . get job = 0 s
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | . initial setup = 2 s
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | . payload setup = 5 s
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | . stage-in = 0 s
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | . payload execution = 4966 s
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | . stage-out = 1 s
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | . log creation = 0 s
[2026-01-14 09:40:42] 2026-01-14 14:39:54,066 | INFO     | ..............................
[2026-01-14 09:40:42] 2026-01-14 14:39:54,154 | INFO     | 
[2026-01-14 09:40:42] 2026-01-14 14:39:54,155 | INFO     | job summary report
[2026-01-14 09:40:42] 2026-01-14 14:39:54,155 | INFO     | --------------------------------------------------
[2026-01-14 09:40:42] 2026-01-14 14:39:54,155 | INFO     | PanDA job id: 6969345029
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | task id: 48215263
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | errors: (none)
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | pilot state: finished 
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | transexitcode: 0
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | exeerrorcode: 0
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | exeerrordiag: 
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | exitcode: 0
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | exitmsg: OK
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | cpuconsumptiontime: 25551 s
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | nevents: 400
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | neventsw: 0
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | pid: 3638593
[2026-01-14 09:40:42] 2026-01-14 14:39:54,156 | INFO     | pgrp: 3638593
[2026-01-14 09:40:42] 2026-01-14 14:39:54,157 | INFO     | corecount: 10
[2026-01-14 09:40:42] 2026-01-14 14:39:54,157 | INFO     | event service: False
[2026-01-14 09:40:42] 2026-01-14 14:39:54,157 | INFO     | sizes: {0: 2283949, 4: 2284211, 11: 2284239, 4975: 2310652, 4976: 2310651, 4977: 2319705, 4978: 2319889, 4992: 2320083}
[2026-01-14 09:40:42] 2026-01-14 14:39:54,157 | INFO     | --------------------------------------------------
[2026-01-14 09:40:42] 2026-01-14 14:39:54,157 | INFO     | 
[2026-01-14 09:40:42] 2026-01-14 14:39:54,157 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-14 09:40:42] 2026-01-14 14:39:54,236 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,238 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 09:40:42] 2026-01-14 14:39:54,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 09:40:42] 2026-01-14 14:39:54,238 | INFO     | job 6969345029 has completed (purged errors)
[2026-01-14 09:40:42] 2026-01-14 14:39:54,238 | INFO     | overall cleanup function is called
[2026-01-14 09:40:42] 2026-01-14 14:39:55,256 | INFO     | --- collectZombieJob: --- 10, [3638593]
[2026-01-14 09:40:42] 2026-01-14 14:39:55,256 | INFO     | zombie collector waiting for pid 3638593
[2026-01-14 09:40:42] 2026-01-14 14:39:55,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 09:40:42] 2026-01-14 14:39:55,256 | INFO     | collected zombie processes
[2026-01-14 09:40:42] 2026-01-14 14:39:55,257 | INFO     | will attempt to kill all subprocesses of pid=3638593
[2026-01-14 09:40:42] 2026-01-14 14:39:55,759 | INFO     | process IDs to be killed: [3638593] (in reverse order)
[2026-01-14 09:40:42] 2026-01-14 14:39:55,880 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 09:40:42] 2026-01-14 14:39:55,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 09:40:42] 2026-01-14 14:39:55,918 | INFO     | did not find any defunct processes belonging to 3638593
[2026-01-14 09:40:42] 2026-01-14 14:39:55,929 | INFO     | did not find any defunct processes belonging to 3638593
[2026-01-14 09:40:42] 2026-01-14 14:39:55,930 | INFO     | ready for new job
[2026-01-14 09:40:42] 2026-01-14 14:39:55,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 09:40:42] 2026-01-14 14:39:55,932 | INFO     | ***************************************
[2026-01-14 09:40:42] 2026-01-14 14:39:55,932 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 09:40:42] 2026-01-14 14:39:55,932 | INFO     | ***************************************
[2026-01-14 09:40:42] 2026-01-14 14:39:55,932 | INFO     | 
[2026-01-14 09:40:42] 2026-01-14 14:39:55,935 | INFO     | architecture information:
[2026-01-14 09:40:42] 2026-01-14 14:39:55,935 | INFO     | executing command: cat /etc/os-release
[2026-01-14 09:40:42] 2026-01-14 14:39:55,954 | INFO     | cat /etc/os-release:
[2026-01-14 09:40:42] NAME="CentOS Linux"
[2026-01-14 09:40:42] VERSION="7 (Core)"
[2026-01-14 09:40:42] ID="centos"
[2026-01-14 09:40:42] ID_LIKE="rhel fedora"
[2026-01-14 09:40:42] VERSION_ID="7"
[2026-01-14 09:40:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 09:40:42] ANSI_COLOR="0;31"
[2026-01-14 09:40:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 09:40:42] HOME_URL="https://www.centos.org/"
[2026-01-14 09:40:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 09:40:42] 
[2026-01-14 09:40:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 09:40:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 09:40:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 09:40:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 09:40:42] 
[2026-01-14 09:40:42] 2026-01-14 14:39:55,954 | INFO     | ***************************************
[2026-01-14 09:40:42] 2026-01-14 14:39:56,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-14 09:40:42] 2026-01-14 14:39:56,483 | INFO     | sufficient remaining disk space (71021101056 B)
[2026-01-14 09:40:42] 2026-01-14 14:39:56,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 09:40:42] 2026-01-14 14:39:56,484 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 09:40:42] 2026-01-14 14:39:56,484 | INFO     | update_server=False
[2026-01-14 09:40:42] 2026-01-14 14:39:56,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 09:40:42] 2026-01-14 14:39:57,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 09:40:42] 2026-01-14 14:39:57,002 | INFO     | aborting loop
[2026-01-14 09:40:42] 2026-01-14 14:39:57,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 09:40:42] 2026-01-14 14:39:57,262 | INFO     | all payload control threads have been joined
[2026-01-14 09:40:42] 2026-01-14 14:39:57,383 | INFO     | all data control threads have been joined
[2026-01-14 09:40:42] 2026-01-14 14:39:57,490 | INFO     | [job] retrieve thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:57,779 | INFO     | all job control threads have been joined
[2026-01-14 09:40:42] 2026-01-14 14:39:57,831 | INFO     | [job] validate thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:57,989 | INFO     | [data] copytool_in thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:58,010 | INFO     | [job] job monitor thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:58,069 | INFO     | [payload] validate_post thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:58,235 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:58,268 | INFO     | [payload] control thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:58,389 | INFO     | [data] control thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:58,685 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:58,785 | INFO     | [job] control thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:58,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:58,991 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:59,027 | INFO     | [payload] failed_post thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:59,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 09:40:42] 2026-01-14 14:39:59,233 | INFO     | [data] copytool_out thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:39:59,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 09:40:42] 2026-01-14 14:40:00,174 | INFO     | [job] queue monitor thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:40:03,924 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 09:40:42] 2026-01-14 14:40:26,376 | INFO     | PID=3631756 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 09:40:42] 2026-01-14 14:40:26,377 | INFO     | .. there are 17 such processes running
[2026-01-14 09:40:42] 2026-01-14 14:40:26,382 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 09:40:42] 2026-01-14 14:40:26,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 09:40:42] 2026-01-14 14:40:26,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 09:40:42] 2026-01-14 14:40:35,028 | INFO     | [monitor] cgroup control has ended
[2026-01-14 09:40:42] 2026-01-14 14:40:37,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055308539712)>', '<ExcThread(monitor, started 140054806632192)>']
[2026-01-14 09:40:42] 2026-01-14 14:40:37,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 09:40:42] 2026-01-14 14:40:37,449 | INFO     | [monitor] control thread has ended
[2026-01-14 09:40:42] 2026-01-14 14:40:42,038 | INFO     | all workflow threads have been joined
[2026-01-14 09:40:42] 2026-01-14 14:40:42,038 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 09:40:42] 2026-01-14 14:40:42,038 | INFO     | traces error code: 0
[2026-01-14 09:40:42] 2026-01-14 14:40:42,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 09:40:42] 2026-01-14 14:40:42,206 [wrapper] ==== pilot stdout END ====
[2026-01-14 09:40:42] 2026-01-14 14:40:42,246 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 09:40:42] 2026-01-14 14:40:42,266 [wrapper] pilotpid: 3631756
[2026-01-14 09:40:42] 2026-01-14 14:40:42,278 [wrapper] Pilot exit status: 0
[2026-01-14 09:40:42] 2026-01-14 14:40:42,409 [wrapper] pandaids: 6969345029
[2026-01-14 09:40:42] 2026-01-14 14:40:42,516 [wrapper] cleanup supervisor_pilot 3875327 3631757
[2026-01-14 09:40:42] 2026-01-14 14:40:42,527 [wrapper] Test setup, not cleaning
[2026-01-14 09:40:42] 2026-01-14 14:40:42,552 [wrapper] apfmon messages muted
[2026-01-14 09:40:42] 2026-01-14 14:40:42,570 [wrapper] ==== wrapper stdout END ====
[2026-01-14 09:40:42] 2026-01-14 14:40:42,588 [wrapper] ==== wrapper stderr END ====
[2026-01-14 09:40:42]  *** Error codes and diagnostics ***
[2026-01-14 09:40:42]     "exeErrorCode": 0,
[2026-01-14 09:40:42]     "exeErrorDiag": "",
[2026-01-14 09:40:42]     "pilotErrorCode": 0,
[2026-01-14 09:40:42]     "pilotErrorDiag": "",
[2026-01-14 09:40:42]  *** Listing of results directory ***
[2026-01-14 09:40:42] total 739464
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 00:14 pilot3.tar.gz
[2026-01-14 09:40:42] -rwx------. 1 boincer umatlas     36322 Jan 14 00:14 runpilot2-wrapper.sh
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 00:17 queuedata.json
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas       100 Jan 14 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 09:40:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 08:16 run_atlas
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas       105 Jan 14 08:16 job.xml
[2026-01-14 09:40:42] -rw-r--r--. 2 boincer umatlas 596067245 Jan 14 08:16 EVNT.32794306._000589.pool.root.1
[2026-01-14 09:40:42] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 08:16 shared
[2026-01-14 09:40:42] -rw-r--r--. 2 boincer umatlas    592402 Jan 14 08:16 input.tar.gz
[2026-01-14 09:40:42] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 08:16 start_atlas.sh
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas         0 Jan 14 08:16 boinc_lockfile
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas      2507 Jan 14 08:16 pandaJob.out
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas        57 Jan 14 08:16 setup.sh.local
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas    997566 Jan 14 08:16 agis_schedconf.cvmfs.json
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas   1516246 Jan 14 08:16 agis_ddmendpoints.agis.ALL.json
[2026-01-14 09:40:42] drwx------. 5 boincer umatlas      4096 Jan 14 08:16 pilot3
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas 155037876 Jan 14 09:39 HITS.48215263._014720.pool.root.1
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas       530 Jan 14 09:39 boinc_task_state.xml
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas      1039 Jan 14 09:39 memory_monitor_summary.json
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas    369362 Jan 14 09:39 log.48215263._014720.job.log.tgz.1
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas      7820 Jan 14 09:39 heartbeat.json
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas      6841 Jan 14 09:40 init_data.xml
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas        95 Jan 14 09:40 pilot_heartbeat.json
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas        27 Jan 14 09:40 wrapper_checkpoint.txt
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas      4824 Jan 14 09:40 pilotlog.txt
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas    720848 Jan 14 09:40 log.48215263._014720.job.log.1
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas       357 Jan 14 09:40 output.list
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas       620 Jan 14 09:40 runtime_log
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas   1105920 Jan 14 09:40 result.tar.gz
[2026-01-14 09:40:42] -rw-------. 1 boincer umatlas       652 Jan 14 09:40 s2ENDmCO8z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTzjKDmHsf17m.diag
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas      9344 Jan 14 09:40 runtime_log.err
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 09:40 boinc_mmap_file
[2026-01-14 09:40:42] -rw-r--r--. 1 boincer umatlas     22659 Jan 14 09:40 stderr.txt
[2026-01-14 09:40:43] HITS file was successfully produced:
[2026-01-14 09:40:43] -rw-------. 1 boincer umatlas 155037876 Jan 14 09:39 shared/HITS.pool.root.1
[2026-01-14 09:40:43]  *** Contents of shared directory: ***
[2026-01-14 09:40:43] total 735192
[2026-01-14 09:40:43] -rw-r--r--. 2 boincer umatlas 596067245 Jan 14 08:16 ATLAS.root_0
[2026-01-14 09:40:43] -rw-r--r--. 2 boincer umatlas    592402 Jan 14 08:16 input.tar.gz
[2026-01-14 09:40:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 08:16 start_atlas.sh
[2026-01-14 09:40:43] -rw-------. 1 boincer umatlas 155037876 Jan 14 09:39 HITS.pool.root.1
[2026-01-14 09:40:43] -rw-------. 1 boincer umatlas   1105920 Jan 14 09:40 result.tar.gz
09:40:44 (3628084): run_atlas exited; CPU time 25673.426175
09:40:44 (3628084): called boinc_finish(0)

</stderr_txt>
]]>

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