Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:34:26 (2572): wrapper (7.7.26015): starting
07:34:26 (2572): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 07:34:26] Arguments: --nthreads 12
[2026-01-14 07:34:26] Threads: 12
[2026-01-14 07:34:26] Checking for CVMFS
[2026-01-14 07:34:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 07:34:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 07:34:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 07:34:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 07:34:26] 2.11.2.0 2916 358201 101288 155132 0 56 17253776 20275200 1 130560 1 150287716 99.944 22180143 17020 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 07:34:26] CVMFS is ok
[2026-01-14 07:34:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 07:34:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 07:34:26] Further information can be found at the LHC@home message board.
[2026-01-14 07:34:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 07:34:26] Checking for apptainer binary...
[2026-01-14 07:34:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 07:34:26] Running /usr/bin/apptainer --version
[2026-01-14 07:34:26] apptainer version 1.3.2-1.el7
[2026-01-14 07:34:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 07:34:28] c-205-23.aglt2.org
[2026-01-14 07:34:28] apptainer works
[2026-01-14 07:34:28] Set ATHENA_PROC_NUMBER=12
[2026-01-14 07:34:28] Set ATHENA_CORE_NUMBER=12
[2026-01-14 07:34:28] Starting ATLAS job with PandaID=6969345094
[2026-01-14 07:34:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 08:20:52]  *** The last 200 lines of the pilot log: ***
[2026-01-14 08:20:53]  scope=mc23_13p6TeV
[2026-01-14 08:20:53]  status=None
[2026-01-14 08:20:53]  status_code=0
[2026-01-14 08:20:53]  storage_token=
[2026-01-14 08:20:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969345094/log.48215263._014785.job.log.tgz.1
[2026-01-14 08:20:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/6b/log.48215263._014785.job.log.tgz.1
[2026-01-14 08:20:53]  workdir=None
[2026-01-14 08:20:53] ]
[2026-01-14 08:20:53] 2026-01-14 13:19:52,110 | INFO     | transferring file log.48215263._014785.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969345094/log.48215263._014785.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 08:20:53] 2026-01-14 13:19:52,110 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969345094/log.48215263._014785.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._014785.job
[2026-01-14 08:20:53] 2026-01-14 13:19:52,132 | INFO     | adding to output.list: log.48215263._014785.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/6b/log.48215263._014785.job.log.tg
[2026-01-14 08:20:53] 2026-01-14 13:19:52,133 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 08:20:53] 2026-01-14 13:19:52,133 | INFO     | summary of transferred files:
[2026-01-14 08:20:53] 2026-01-14 13:19:52,133 | INFO     |  -- lfn=log.48215263._014785.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 08:20:53] 2026-01-14 13:19:52,133 | INFO     | stage-out finished correctly
[2026-01-14 08:20:53] 2026-01-14 13:19:53,599 | INFO     | time since job start (2710s) is within the limit (349056.0s)
[2026-01-14 08:20:53] 2026-01-14 13:19:54,503 | INFO     | monitor loop #206: job 0:6969345094 is in state 'finished'
[2026-01-14 08:20:53] 2026-01-14 13:19:54,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 08:20:53] 2026-01-14 13:19:55,605 | INFO     | time since job start (2712s) is within the limit (349056.0s)
[2026-01-14 08:20:53] 2026-01-14 13:19:55,668 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 08:20:53] 2026-01-14 13:19:57,006 | INFO     | monitor loop #207: job 0:6969345094 is in state 'finished'
[2026-01-14 08:20:53] 2026-01-14 13:19:57,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 08:20:53] 2026-01-14 13:19:57,063 | INFO     | job 6969345094 has state=finished
[2026-01-14 08:20:53] 2026-01-14 13:19:57,063 | INFO     | preparing for final server update for job 6969345094 in state='finished'
[2026-01-14 08:20:53] 2026-01-14 13:19:57,063 | INFO     | this job has now completed (state=finished)
[2026-01-14 08:20:53] 2026-01-14 13:19:57,064 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 08:20:53] 2026-01-14 13:19:57,064 | INFO     | log transfer has been attempted: DONE
[2026-01-14 08:20:53] 2026-01-14 13:19:57,064 | INFO     | job 6969345094 has finished - writing final server update
[2026-01-14 08:20:53] 2026-01-14 13:19:57,064 | INFO     | total number of processed events: 400 (read)
[2026-01-14 08:20:53] 2026-01-14 13:19:57,065 | INFO     | executing command: lscpu
[2026-01-14 08:20:53] 2026-01-14 13:19:57,093 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 08:20:53] 2026-01-14 13:19:57,611 | INFO     | time since job start (2714s) is within the limit (349056.0s)
[2026-01-14 08:20:53] 2026-01-14 13:19:59,514 | INFO     | monitor loop #208: job 0:6969345094 is in state 'finished'
[2026-01-14 08:20:53] 2026-01-14 13:19:59,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 08:20:53] 2026-01-14 13:19:59,616 | INFO     | time since job start (2716s) is within the limit (349056.0s)
[2026-01-14 08:20:53] 2026-01-14 13:20:01,621 | INFO     | time since job start (2718s) is within the limit (349056.0s)
[2026-01-14 08:20:53] 2026-01-14 13:20:02,017 | INFO     | monitor loop #209: job 0:6969345094 is in state 'finished'
[2026-01-14 08:20:53] 2026-01-14 13:20:02,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 08:20:53] 2026-01-14 13:20:02,746 | INFO     | PID=6279 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 08:20:53] 2026-01-14 13:20:02,883 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 08:20:53] 2026-01-14 13:20:02,887 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2026-01-14 08:20:53] 2026-01-14 13:20:02,890 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969345094/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 08:20:53] 2026-01-14 13:20:02,890 | INFO     | extracted standard info from prmon json
[2026-01-14 08:20:53] 2026-01-14 13:20:02,890 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 08:20:53] 2026-01-14 13:20:02,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 08:20:53] 2026-01-14 13:20:02,891 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 08:20:53] 2026-01-14 13:20:02,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 08:20:53] 2026-01-14 13:20:02,892 | INFO     | fitting pss+swap vs Time
[2026-01-14 08:20:53] 2026-01-14 13:20:02,892 | INFO     | sum of square deviations: 15695178.0
[2026-01-14 08:20:53] 2026-01-14 13:20:02,893 | INFO     | sum of deviations: -598064496.0
[2026-01-14 08:20:53] 2026-01-14 13:20:02,893 | INFO     | mean x: 1768395515.0
[2026-01-14 08:20:53] 2026-01-14 13:20:02,893 | INFO     | mean y: 2981448.4594594594
[2026-01-14 08:20:53] 2026-01-14 13:20:02,893 | INFO     | intersect: 67387663062.59186
[2026-01-14 08:20:53] 2026-01-14 13:20:02,893 | INFO     | chi2: 0.02396215307995725
[2026-01-14 08:20:53] 2026-01-14 13:20:02,894 | INFO     | current memory leak: -38.10 B/s (using 37 data points, chi2=0.02)
[2026-01-14 08:20:53] 2026-01-14 13:20:02,894 | INFO     | could have reported an average CPU frequency of 1948 MHz (5 samples)
[2026-01-14 08:20:53] 2026-01-14 13:20:02,894 | INFO     | ..............................
[2026-01-14 08:20:53] 2026-01-14 13:20:02,894 | INFO     | . Timing measurements:
[2026-01-14 08:20:53] 2026-01-14 13:20:02,894 | INFO     | . get job = 0 s
[2026-01-14 08:20:53] 2026-01-14 13:20:02,894 | INFO     | . initial setup = 2 s
[2026-01-14 08:20:53] 2026-01-14 13:20:02,895 | INFO     | . payload setup = 7 s
[2026-01-14 08:20:53] 2026-01-14 13:20:02,895 | INFO     | . stage-in = 0 s
[2026-01-14 08:20:53] 2026-01-14 13:20:02,895 | INFO     | . payload execution = 2681 s
[2026-01-14 08:20:53] 2026-01-14 13:20:02,895 | INFO     | . stage-out = 0 s
[2026-01-14 08:20:53] 2026-01-14 13:20:02,895 | INFO     | . log creation = 0 s
[2026-01-14 08:20:53] 2026-01-14 13:20:02,895 | INFO     | ..............................
[2026-01-14 08:20:53] 2026-01-14 13:20:03,109 | INFO     | 
[2026-01-14 08:20:53] 2026-01-14 13:20:03,110 | INFO     | job summary report
[2026-01-14 08:20:53] 2026-01-14 13:20:03,110 | INFO     | --------------------------------------------------
[2026-01-14 08:20:53] 2026-01-14 13:20:03,110 | INFO     | PanDA job id: 6969345094
[2026-01-14 08:20:53] 2026-01-14 13:20:03,110 | INFO     | task id: 48215263
[2026-01-14 08:20:53] 2026-01-14 13:20:03,110 | INFO     | errors: (none)
[2026-01-14 08:20:53] 2026-01-14 13:20:03,110 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 08:20:53] 2026-01-14 13:20:03,110 | INFO     | pilot state: finished 
[2026-01-14 08:20:53] 2026-01-14 13:20:03,111 | INFO     | transexitcode: 0
[2026-01-14 08:20:53] 2026-01-14 13:20:03,111 | INFO     | exeerrorcode: 0
[2026-01-14 08:20:53] 2026-01-14 13:20:03,111 | INFO     | exeerrordiag: 
[2026-01-14 08:20:53] 2026-01-14 13:20:03,111 | INFO     | exitcode: 0
[2026-01-14 08:20:53] 2026-01-14 13:20:03,111 | INFO     | exitmsg: OK
[2026-01-14 08:20:53] 2026-01-14 13:20:03,111 | INFO     | cpuconsumptiontime: 28980 s
[2026-01-14 08:20:53] 2026-01-14 13:20:03,112 | INFO     | nevents: 400
[2026-01-14 08:20:53] 2026-01-14 13:20:03,112 | INFO     | neventsw: 0
[2026-01-14 08:20:53] 2026-01-14 13:20:03,112 | INFO     | pid: 13304
[2026-01-14 08:20:53] 2026-01-14 13:20:03,112 | INFO     | pgrp: 13304
[2026-01-14 08:20:53] 2026-01-14 13:20:03,112 | INFO     | corecount: 12
[2026-01-14 08:20:53] 2026-01-14 13:20:03,112 | INFO     | event service: False
[2026-01-14 08:20:53] 2026-01-14 13:20:03,113 | INFO     | sizes: {0: 2283121, 1: 2283977, 6: 2284239, 12: 2284267, 2692: 2309480, 2693: 2318478, 2697: 2318662, 2704: 2318888}
[2026-01-14 08:20:53] 2026-01-14 13:20:03,113 | INFO     | --------------------------------------------------
[2026-01-14 08:20:53] 2026-01-14 13:20:03,113 | INFO     | 
[2026-01-14 08:20:53] 2026-01-14 13:20:03,113 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 08:20:53] 2026-01-14 13:20:03,136 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,136 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,136 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,136 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,137 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,138 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,139 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 08:20:53] 2026-01-14 13:20:03,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,139 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 08:20:53] 2026-01-14 13:20:03,139 | INFO     | job 6969345094 has completed (purged errors)
[2026-01-14 08:20:53] 2026-01-14 13:20:03,140 | INFO     | overall cleanup function is called
[2026-01-14 08:20:53] 2026-01-14 13:20:04,147 | INFO     | --- collectZombieJob: --- 10, [13304]
[2026-01-14 08:20:53] 2026-01-14 13:20:04,148 | INFO     | zombie collector waiting for pid 13304
[2026-01-14 08:20:53] 2026-01-14 13:20:04,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 08:20:53] 2026-01-14 13:20:04,148 | INFO     | collected zombie processes
[2026-01-14 08:20:53] 2026-01-14 13:20:04,148 | INFO     | will attempt to kill all subprocesses of pid=13304
[2026-01-14 08:20:53] 2026-01-14 13:20:04,240 | INFO     | process IDs to be killed: [13304] (in reverse order)
[2026-01-14 08:20:53] 2026-01-14 13:20:04,290 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 08:20:53] 2026-01-14 13:20:04,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 08:20:53] 2026-01-14 13:20:04,295 | INFO     | did not find any defunct processes belonging to 13304
[2026-01-14 08:20:53] 2026-01-14 13:20:04,298 | INFO     | did not find any defunct processes belonging to 13304
[2026-01-14 08:20:53] 2026-01-14 13:20:04,299 | INFO     | ready for new job
[2026-01-14 08:20:53] 2026-01-14 13:20:04,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 08:20:53] 2026-01-14 13:20:04,300 | INFO     | ***************************************
[2026-01-14 08:20:53] 2026-01-14 13:20:04,300 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 08:20:53] 2026-01-14 13:20:04,300 | INFO     | ***************************************
[2026-01-14 08:20:53] 2026-01-14 13:20:04,301 | INFO     | 
[2026-01-14 08:20:53] 2026-01-14 13:20:04,301 | INFO     | architecture information:
[2026-01-14 08:20:53] 2026-01-14 13:20:04,302 | INFO     | executing command: cat /etc/os-release
[2026-01-14 08:20:53] 2026-01-14 13:20:04,315 | INFO     | cat /etc/os-release:
[2026-01-14 08:20:53] NAME="CentOS Linux"
[2026-01-14 08:20:53] VERSION="7 (Core)"
[2026-01-14 08:20:53] ID="centos"
[2026-01-14 08:20:53] ID_LIKE="rhel fedora"
[2026-01-14 08:20:53] VERSION_ID="7"
[2026-01-14 08:20:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 08:20:53] ANSI_COLOR="0;31"
[2026-01-14 08:20:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 08:20:53] HOME_URL="https://www.centos.org/"
[2026-01-14 08:20:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 08:20:53] 
[2026-01-14 08:20:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 08:20:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 08:20:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 08:20:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 08:20:53] 
[2026-01-14 08:20:53] 2026-01-14 13:20:04,315 | INFO     | ***************************************
[2026-01-14 08:20:53] 2026-01-14 13:20:04,819 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 08:20:53] 2026-01-14 13:20:04,835 | INFO     | sufficient remaining disk space (28635561984 B)
[2026-01-14 08:20:53] 2026-01-14 13:20:04,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 08:20:53] 2026-01-14 13:20:04,835 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 08:20:53] 2026-01-14 13:20:04,835 | INFO     | update_server=False
[2026-01-14 08:20:53] 2026-01-14 13:20:04,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 08:20:53] 2026-01-14 13:20:04,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 08:20:53] 2026-01-14 13:20:05,104 | INFO     | all payload control threads have been joined
[2026-01-14 08:20:53] 2026-01-14 13:20:05,182 | INFO     | all data control threads have been joined
[2026-01-14 08:20:53] 2026-01-14 13:20:05,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 08:20:53] 2026-01-14 13:20:05,372 | INFO     | all job control threads have been joined
[2026-01-14 08:20:53] 2026-01-14 13:20:05,529 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 08:20:53] 2026-01-14 13:20:05,529 | INFO     | aborting loop
[2026-01-14 08:20:53] 2026-01-14 13:20:05,841 | INFO     | [job] retrieve thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:05,841 | INFO     | [job] queue monitor thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:05,950 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:06,110 | INFO     | [payload] control thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:06,187 | INFO     | [data] control thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:06,225 | INFO     | [payload] validate_post thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:06,254 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:06,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 08:20:53] 2026-01-14 13:20:06,377 | INFO     | [job] control thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:06,535 | INFO     | [job] job monitor thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:06,551 | INFO     | [data] copytool_in thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:06,744 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:06,770 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:07,058 | INFO     | [job] validate thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:07,239 | INFO     | [data] copytool_out thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:07,278 | INFO     | [payload] failed_post thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:10,262 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 08:20:53] 2026-01-14 13:20:34,942 | INFO     | PID=6279 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 08:20:53] 2026-01-14 13:20:34,943 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 08:20:53] 2026-01-14 13:20:34,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 08:20:53] 2026-01-14 13:20:34,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 08:20:53] 2026-01-14 13:20:47,004 | INFO     | [monitor] cgroup control has ended
[2026-01-14 08:20:53] 2026-01-14 13:20:47,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140563402262336)>', '<ExcThread(monitor, started 140562963343104)>']
[2026-01-14 08:20:53] 2026-01-14 13:20:48,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 08:20:53] 2026-01-14 13:20:48,009 | INFO     | [monitor] control thread has ended
[2026-01-14 08:20:53] 2026-01-14 13:20:52,680 | INFO     | all workflow threads have been joined
[2026-01-14 08:20:53] 2026-01-14 13:20:52,681 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 08:20:53] 2026-01-14 13:20:52,681 | INFO     | traces error code: 0
[2026-01-14 08:20:53] 2026-01-14 13:20:52,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 08:20:53] 2026-01-14 13:20:52,786 [wrapper] ==== pilot stdout END ====
[2026-01-14 08:20:53] 2026-01-14 13:20:52,790 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 08:20:53] 2026-01-14 13:20:52,793 [wrapper] pilotpid: 6279
[2026-01-14 08:20:53] 2026-01-14 13:20:52,797 [wrapper] Pilot exit status: 0
[2026-01-14 08:20:53] 2026-01-14 13:20:52,813 [wrapper] pandaids: 6969345094
[2026-01-14 08:20:53] 2026-01-14 13:20:52,861 [wrapper] cleanup supervisor_pilot 31493 6280
[2026-01-14 08:20:53] 2026-01-14 13:20:52,865 [wrapper] Test setup, not cleaning
[2026-01-14 08:20:53] 2026-01-14 13:20:52,869 [wrapper] apfmon messages muted
[2026-01-14 08:20:53] 2026-01-14 13:20:52,873 [wrapper] ==== wrapper stdout END ====
[2026-01-14 08:20:53] 2026-01-14 13:20:52,877 [wrapper] ==== wrapper stderr END ====
[2026-01-14 08:20:53]  *** Error codes and diagnostics ***
[2026-01-14 08:20:53]     "exeErrorCode": 0,
[2026-01-14 08:20:53]     "exeErrorDiag": "",
[2026-01-14 08:20:53]     "pilotErrorCode": 0,
[2026-01-14 08:20:53]     "pilotErrorDiag": "",
[2026-01-14 08:20:53]  *** Listing of results directory ***
[2026-01-14 08:20:53] total 734980
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 00:14 pilot3.tar.gz
[2026-01-14 08:20:53] -rwx------ 1 boincer umatlas     36322 Jan 14 00:14 runpilot2-wrapper.sh
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 00:17 queuedata.json
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas       100 Jan 14 07:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 08:20:53] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 07:34 run_atlas
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas       105 Jan 14 07:34 job.xml
[2026-01-14 08:20:53] -rw-r--r-- 2 boincer umatlas 595908997 Jan 14 07:34 EVNT.32794306._000592.pool.root.1
[2026-01-14 08:20:53] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 07:34 start_atlas.sh
[2026-01-14 08:20:53] drwxrwx--x 2 boincer umatlas      4096 Jan 14 07:34 shared
[2026-01-14 08:20:53] -rw-r--r-- 2 boincer umatlas    592400 Jan 14 07:34 input.tar.gz
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas         0 Jan 14 07:34 boinc_lockfile
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas      2507 Jan 14 07:34 pandaJob.out
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas        57 Jan 14 07:34 setup.sh.local
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas    997566 Jan 14 07:34 agis_schedconf.cvmfs.json
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas   1516246 Jan 14 07:34 agis_ddmendpoints.agis.ALL.json
[2026-01-14 08:20:53] drwx------ 5 boincer umatlas      4096 Jan 14 07:34 pilot3
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas      5952 Jan 14 08:19 init_data.xml
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas 151247952 Jan 14 08:19 HITS.48215263._014785.pool.root.1
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas       530 Jan 14 08:19 boinc_task_state.xml
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas      1042 Jan 14 08:19 memory_monitor_summary.json
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas    354578 Jan 14 08:19 log.48215263._014785.job.log.tgz.1
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas      7841 Jan 14 08:20 heartbeat.json
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas        95 Jan 14 08:20 pilot_heartbeat.json
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 08:20 boinc_mmap_file
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas        27 Jan 14 08:20 wrapper_checkpoint.txt
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas      4745 Jan 14 08:20 pilotlog.txt
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas    415753 Jan 14 08:20 log.48215263._014785.job.log.1
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas       357 Jan 14 08:20 output.list
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas       620 Jan 14 08:20 runtime_log
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas    788480 Jan 14 08:20 result.tar.gz
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas      9344 Jan 14 08:20 runtime_log.err
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas       659 Jan 14 08:20 oHkLDmOO8z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYFqKDmmpbpYn.diag
[2026-01-14 08:20:53] -rw-r--r-- 1 boincer umatlas     22109 Jan 14 08:20 stderr.txt
[2026-01-14 08:20:53] HITS file was successfully produced:
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas 151247952 Jan 14 08:19 shared/HITS.pool.root.1
[2026-01-14 08:20:53]  *** Contents of shared directory: ***
[2026-01-14 08:20:53] total 731020
[2026-01-14 08:20:53] -rw-r--r-- 2 boincer umatlas 595908997 Jan 14 07:34 ATLAS.root_0
[2026-01-14 08:20:53] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 07:34 start_atlas.sh
[2026-01-14 08:20:53] -rw-r--r-- 2 boincer umatlas    592400 Jan 14 07:34 input.tar.gz
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas 151247952 Jan 14 08:19 HITS.pool.root.1
[2026-01-14 08:20:53] -rw------- 1 boincer umatlas    788480 Jan 14 08:20 result.tar.gz
08:20:54 (2572): run_atlas exited; CPU time 28956.712565
08:20:54 (2572): called boinc_finish(0)

</stderr_txt>
]]>

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