Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:39:20 (3551690): wrapper (7.7.26015): starting
07:39:20 (3551690): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 07:39:20] Arguments: --nthreads 8
[2026-01-14 07:39:20] Threads: 8
[2026-01-14 07:39:20] Checking for CVMFS
[2026-01-14 07:39:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 07:39:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 07:39:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 07:39:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 07:39:21] 2.13.3.0 22787 100570 261988 155132 0 696 33196640 40960001 25873 16776704 0 1198797136 99.718 870835735 50164 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 07:39:21] CVMFS is ok
[2026-01-14 07:39:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 07:39:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 07:39:21] Further information can be found at the LHC@home message board.
[2026-01-14 07:39:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 07:39:21] Checking for apptainer binary...
[2026-01-14 07:39:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 07:39:21] Running /usr/bin/apptainer --version
[2026-01-14 07:39:21] apptainer version 1.4.5-2.el9
[2026-01-14 07:39:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 07:39:22] c8-6-11.aglt2.org
[2026-01-14 07:39:22] apptainer works
[2026-01-14 07:39:22] Set ATHENA_PROC_NUMBER=8
[2026-01-14 07:39:22] Set ATHENA_CORE_NUMBER=8
[2026-01-14 07:39:22] Starting ATLAS job with PandaID=6969274354
[2026-01-14 07:39:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 08:33:04]  *** The last 200 lines of the pilot log: ***
[2026-01-14 08:33:04]  lfn=log.48215263._008414.job.log.tgz.1
[2026-01-14 08:33:04]  mtime=0
[2026-01-14 08:33:04]  protocol_id=None
[2026-01-14 08:33:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 08:33:04]  replicas=None
[2026-01-14 08:33:04]  scope=mc23_13p6TeV
[2026-01-14 08:33:04]  status=None
[2026-01-14 08:33:04]  status_code=0
[2026-01-14 08:33:04]  storage_token=
[2026-01-14 08:33:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969274354/log.48215263._008414.job.log.tgz.1
[2026-01-14 08:33:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/3d/log.48215263._008414.job.log.tgz.1
[2026-01-14 08:33:04]  workdir=None
[2026-01-14 08:33:04] ]
[2026-01-14 08:33:04] 2026-01-14 13:32:10,790 | INFO     | transferring file log.48215263._008414.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969274354/log.48215263._008414.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 08:33:04] 2026-01-14 13:32:10,790 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969274354/log.48215263._008414.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._008414.job
[2026-01-14 08:33:04] 2026-01-14 13:32:10,809 | INFO     | adding to output.list: log.48215263._008414.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/3d/log.48215263._008414.job.log.tg
[2026-01-14 08:33:04] 2026-01-14 13:32:10,810 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 08:33:04] 2026-01-14 13:32:10,810 | INFO     | summary of transferred files:
[2026-01-14 08:33:04] 2026-01-14 13:32:10,810 | INFO     |  -- lfn=log.48215263._008414.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 08:33:04] 2026-01-14 13:32:10,810 | INFO     | stage-out finished correctly
[2026-01-14 08:33:04] 2026-01-14 13:32:10,869 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 08:33:04] 2026-01-14 13:32:10,879 | INFO     | time since job start (3137s) is within the limit (349056.0s)
[2026-01-14 08:33:04] 2026-01-14 13:32:10,924 | INFO     | job 6969274354 has state=finished
[2026-01-14 08:33:04] 2026-01-14 13:32:10,924 | INFO     | preparing for final server update for job 6969274354 in state='finished'
[2026-01-14 08:33:04] 2026-01-14 13:32:10,924 | INFO     | this job has now completed (state=finished)
[2026-01-14 08:33:04] 2026-01-14 13:32:10,924 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 08:33:04] 2026-01-14 13:32:10,924 | INFO     | log transfer has been attempted: DONE
[2026-01-14 08:33:04] 2026-01-14 13:32:10,925 | INFO     | job 6969274354 has finished - writing final server update
[2026-01-14 08:33:04] 2026-01-14 13:32:10,925 | INFO     | total number of processed events: 400 (read)
[2026-01-14 08:33:04] 2026-01-14 13:32:10,925 | INFO     | executing command: lscpu
[2026-01-14 08:33:04] 2026-01-14 13:32:10,977 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 08:33:04] 2026-01-14 13:32:12,884 | INFO     | time since job start (3139s) is within the limit (349056.0s)
[2026-01-14 08:33:04] 2026-01-14 13:32:14,386 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 08:33:04] 2026-01-14 13:32:14,391 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3739.6265156250015
[2026-01-14 08:33:04] 2026-01-14 13:32:14,404 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969274354/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 08:33:04] 2026-01-14 13:32:14,405 | INFO     | extracted standard info from prmon json
[2026-01-14 08:33:04] 2026-01-14 13:32:14,405 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 08:33:04] 2026-01-14 13:32:14,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 08:33:04] 2026-01-14 13:32:14,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 08:33:04] 2026-01-14 13:32:14,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 08:33:04] 2026-01-14 13:32:14,406 | INFO     | fitting pss+swap vs Time
[2026-01-14 08:33:04] 2026-01-14 13:32:14,406 | INFO     | sum of square deviations: 24640951.90697674
[2026-01-14 08:33:04] 2026-01-14 13:32:14,406 | INFO     | sum of deviations: -977057029.976744
[2026-01-14 08:33:04] 2026-01-14 13:32:14,406 | INFO     | mean x: 1768396099.0465117
[2026-01-14 08:33:04] 2026-01-14 13:32:14,406 | INFO     | mean y: 2590005.488372093
[2026-01-14 08:33:04] 2026-01-14 13:32:14,406 | INFO     | intersect: 70122601881.63817
[2026-01-14 08:33:04] 2026-01-14 13:32:14,406 | INFO     | chi2: 0.0016639528692167977
[2026-01-14 08:33:04] 2026-01-14 13:32:14,406 | INFO     | current memory leak: -39.65 B/s (using 43 data points, chi2=0.00)
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | could have reported an average CPU frequency of 3788 MHz (5 samples)
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | ..............................
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | . Timing measurements:
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | . get job = 0 s
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | . initial setup = 4 s
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | . payload setup = 39 s
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | . stage-in = 0 s
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | . payload execution = 3039 s
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | . stage-out = 0 s
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | . log creation = 0 s
[2026-01-14 08:33:04] 2026-01-14 13:32:14,407 | INFO     | ..............................
[2026-01-14 08:33:04] 2026-01-14 13:32:14,463 | INFO     | 
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | job summary report
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | --------------------------------------------------
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | PanDA job id: 6969274354
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | task id: 48215263
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | errors: (none)
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | pilot state: finished 
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | transexitcode: 0
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | exeerrorcode: 0
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | exeerrordiag: 
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | exitcode: 0
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | exitmsg: OK
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | cpuconsumptiontime: 14696 s
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | nevents: 400
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | neventsw: 0
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | pid: 3589746
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | pgrp: 3589746
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | corecount: 8
[2026-01-14 08:33:04] 2026-01-14 13:32:14,464 | INFO     | event service: False
[2026-01-14 08:33:04] 2026-01-14 13:32:14,465 | INFO     | sizes: {0: 2283944, 1: 2283944, 12: 2283972, 20: 2284262, 22: 2284290, 3082: 2309822, 3083: 2318876, 3087: 2319046}
[2026-01-14 08:33:04] 2026-01-14 13:32:14,465 | INFO     | --------------------------------------------------
[2026-01-14 08:33:04] 2026-01-14 13:32:14,465 | INFO     | 
[2026-01-14 08:33:04] 2026-01-14 13:32:14,465 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 08:33:04] 2026-01-14 13:32:14,483 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,484 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 08:33:04] 2026-01-14 13:32:14,485 | INFO     | job 6969274354 has completed (purged errors)
[2026-01-14 08:33:04] 2026-01-14 13:32:14,485 | INFO     | overall cleanup function is called
[2026-01-14 08:33:04] 2026-01-14 13:32:15,492 | INFO     | --- collectZombieJob: --- 10, [3589746]
[2026-01-14 08:33:04] 2026-01-14 13:32:15,493 | INFO     | zombie collector waiting for pid 3589746
[2026-01-14 08:33:04] 2026-01-14 13:32:15,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 08:33:04] 2026-01-14 13:32:15,493 | INFO     | collected zombie processes
[2026-01-14 08:33:04] 2026-01-14 13:32:15,494 | INFO     | will attempt to kill all subprocesses of pid=3589746
[2026-01-14 08:33:04] 2026-01-14 13:32:16,156 | WARNING  | process 3589746 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 08:33:04] 2026-01-14 13:32:16,692 | INFO     | process IDs to be killed: [3589746] (in reverse order)
[2026-01-14 08:33:04] 2026-01-14 13:32:16,836 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 08:33:04] 2026-01-14 13:32:16,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 08:33:04] 2026-01-14 13:32:16,891 | INFO     | did not find any defunct processes belonging to 3589746
[2026-01-14 08:33:04] 2026-01-14 13:32:16,919 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 08:33:04] 2026-01-14 13:32:16,934 | INFO     | did not find any defunct processes belonging to 3589746
[2026-01-14 08:33:04] 2026-01-14 13:32:16,934 | INFO     | ready for new job
[2026-01-14 08:33:04] 2026-01-14 13:32:16,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 08:33:04] 2026-01-14 13:32:16,936 | INFO     | ***************************************
[2026-01-14 08:33:04] 2026-01-14 13:32:16,936 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 08:33:04] 2026-01-14 13:32:16,936 | INFO     | ***************************************
[2026-01-14 08:33:04] 2026-01-14 13:32:16,936 | INFO     | 
[2026-01-14 08:33:04] 2026-01-14 13:32:16,941 | INFO     | architecture information:
[2026-01-14 08:33:04] 2026-01-14 13:32:16,941 | INFO     | executing command: cat /etc/os-release
[2026-01-14 08:33:04] 2026-01-14 13:32:16,952 | INFO     | cat /etc/os-release:
[2026-01-14 08:33:04] NAME="CentOS Linux"
[2026-01-14 08:33:04] VERSION="7 (Core)"
[2026-01-14 08:33:04] ID="centos"
[2026-01-14 08:33:04] ID_LIKE="rhel fedora"
[2026-01-14 08:33:04] VERSION_ID="7"
[2026-01-14 08:33:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 08:33:04] ANSI_COLOR="0;31"
[2026-01-14 08:33:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 08:33:04] HOME_URL="https://www.centos.org/"
[2026-01-14 08:33:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 08:33:04] 
[2026-01-14 08:33:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 08:33:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 08:33:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 08:33:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 08:33:04] 
[2026-01-14 08:33:04] 2026-01-14 13:32:16,953 | INFO     | ***************************************
[2026-01-14 08:33:04] 2026-01-14 13:32:17,318 | INFO     | number of running child processes to parent process 3589746: 1
[2026-01-14 08:33:04] 2026-01-14 13:32:17,319 | INFO     | maximum number of monitored processes: 6
[2026-01-14 08:33:04] 2026-01-14 13:32:17,319 | INFO     | aborting job monitoring since job object (job id=6969274354) has expired
[2026-01-14 08:33:04] 2026-01-14 13:32:17,455 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 08:33:04] 2026-01-14 13:32:17,470 | INFO     | sufficient remaining disk space (165994823680 B)
[2026-01-14 08:33:04] 2026-01-14 13:32:17,471 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 08:33:04] 2026-01-14 13:32:17,471 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 08:33:04] 2026-01-14 13:32:17,471 | INFO     | update_server=False
[2026-01-14 08:33:04] 2026-01-14 13:32:17,471 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 08:33:04] 2026-01-14 13:32:17,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 08:33:04] 2026-01-14 13:32:17,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 08:33:04] 2026-01-14 13:32:17,472 | INFO     | will abort loop
[2026-01-14 08:33:04] 2026-01-14 13:32:17,537 | INFO     | all payload control threads have been joined
[2026-01-14 08:33:04] 2026-01-14 13:32:18,476 | INFO     | [job] retrieve thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:18,477 | INFO     | [job] job monitor thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:18,516 | INFO     | all data control threads have been joined
[2026-01-14 08:33:04] 2026-01-14 13:32:18,542 | INFO     | [payload] control thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:18,549 | INFO     | all job control threads have been joined
[2026-01-14 08:33:04] 2026-01-14 13:32:18,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 08:33:04] 2026-01-14 13:32:19,090 | INFO     | [payload] validate_post thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:19,410 | INFO     | [job] validate thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:19,437 | INFO     | [data] copytool_in thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:19,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 08:33:04] 2026-01-14 13:32:19,522 | INFO     | [data] control thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:19,529 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:19,549 | INFO     | [payload] failed_post thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:19,554 | INFO     | [job] control thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:19,597 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:19,646 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:20,480 | INFO     | [job] queue monitor thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:20,885 | INFO     | [data] copytool_out thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:21,477 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:27,949 | INFO     | job.realtimelogging is not enabled
[2026-01-14 08:33:04] 2026-01-14 13:32:28,954 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 08:33:04] 2026-01-14 13:32:46,489 | INFO     | PID=3563070 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 08:33:04] 2026-01-14 13:32:46,489 | INFO     | .. there are 27 such processes running
[2026-01-14 08:33:04] 2026-01-14 13:32:46,489 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 08:33:04] 2026-01-14 13:32:46,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 08:33:04] 2026-01-14 13:32:46,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 08:33:04] 2026-01-14 13:32:58,213 | INFO     | [monitor] cgroup control has ended
[2026-01-14 08:33:04] 2026-01-14 13:32:58,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546659227456)>', '<ExcThread(monitor, started 140546009978624)>']
[2026-01-14 08:33:04] 2026-01-14 13:32:59,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 08:33:04] 2026-01-14 13:32:59,550 | INFO     | [monitor] control thread has ended
[2026-01-14 08:33:04] 2026-01-14 13:33:03,850 | INFO     | all workflow threads have been joined
[2026-01-14 08:33:04] 2026-01-14 13:33:03,850 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 08:33:04] 2026-01-14 13:33:03,850 | INFO     | traces error code: 0
[2026-01-14 08:33:04] 2026-01-14 13:33:03,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 08:33:04] 2026-01-14 13:33:03,970 [wrapper] ==== pilot stdout END ====
[2026-01-14 08:33:04] 2026-01-14 13:33:03,973 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 08:33:04] 2026-01-14 13:33:03,976 [wrapper] pilotpid: 3563070
[2026-01-14 08:33:04] 2026-01-14 13:33:03,978 [wrapper] Pilot exit status: 0
[2026-01-14 08:33:04] 2026-01-14 13:33:03,988 [wrapper] pandaids: 6969274354
[2026-01-14 08:33:04] 2026-01-14 13:33:04,091 [wrapper] cleanup supervisor_pilot 4051640 3563071
[2026-01-14 08:33:04] 2026-01-14 13:33:04,094 [wrapper] Test setup, not cleaning
[2026-01-14 08:33:04] 2026-01-14 13:33:04,098 [wrapper] apfmon messages muted
[2026-01-14 08:33:04] 2026-01-14 13:33:04,100 [wrapper] ==== wrapper stdout END ====
[2026-01-14 08:33:04] 2026-01-14 13:33:04,102 [wrapper] ==== wrapper stderr END ====
[2026-01-14 08:33:04]  *** Error codes and diagnostics ***
[2026-01-14 08:33:04]     "exeErrorCode": 0,
[2026-01-14 08:33:04]     "exeErrorDiag": "",
[2026-01-14 08:33:04]     "pilotErrorCode": 0,
[2026-01-14 08:33:04]     "pilotErrorDiag": "",
[2026-01-14 08:33:04]  *** Listing of results directory ***
[2026-01-14 08:33:04] total 733396
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 18:46 pilot3.tar.gz
[2026-01-14 08:33:04] -rwx------. 1 boincer umatlas     36322 Jan 13 18:47 runpilot2-wrapper.sh
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 18:49 queuedata.json
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas       100 Jan 14 07:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 08:33:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 07:39 run_atlas
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas       105 Jan 14 07:39 job.xml
[2026-01-14 08:33:04] -rw-r--r--. 2 boincer umatlas 592371088 Jan 14 07:39 EVNT.32794306._000337.pool.root.1
[2026-01-14 08:33:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 07:39 start_atlas.sh
[2026-01-14 08:33:04] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 07:39 shared
[2026-01-14 08:33:04] -rw-r--r--. 2 boincer umatlas    592392 Jan 14 07:39 input.tar.gz
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas         0 Jan 14 07:39 boinc_lockfile
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas      2504 Jan 14 07:39 pandaJob.out
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas        57 Jan 14 07:39 setup.sh.local
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas    997566 Jan 14 07:39 agis_schedconf.cvmfs.json
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas   1516246 Jan 14 07:39 agis_ddmendpoints.agis.ALL.json
[2026-01-14 08:33:04] drwx------. 5 boincer umatlas      4096 Jan 14 07:39 pilot3
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas      7173 Jan 14 08:29 init_data.xml
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas       531 Jan 14 08:31 boinc_task_state.xml
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas 153176696 Jan 14 08:31 HITS.48215263._008414.pool.root.1
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas        95 Jan 14 08:31 pilot_heartbeat.json
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas      1027 Jan 14 08:32 memory_monitor_summary.json
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas    304550 Jan 14 08:32 log.48215263._008414.job.log.tgz.1
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas      7765 Jan 14 08:32 heartbeat.json
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 08:32 boinc_mmap_file
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas        27 Jan 14 08:32 wrapper_checkpoint.txt
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas      5187 Jan 14 08:33 pilotlog.txt
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas    458754 Jan 14 08:33 log.48215263._008414.job.log.1
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas       357 Jan 14 08:33 output.list
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas       620 Jan 14 08:33 runtime_log
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas    778240 Jan 14 08:33 result.tar.gz
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas       650 Jan 14 08:33 rXqNDmII3z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmG8iKDm0n5pMn.diag
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas      9337 Jan 14 08:33 runtime_log.err
[2026-01-14 08:33:04] -rw-r--r--. 1 boincer umatlas     21698 Jan 14 08:33 stderr.txt
[2026-01-14 08:33:04] HITS file was successfully produced:
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas 153176696 Jan 14 08:31 shared/HITS.pool.root.1
[2026-01-14 08:33:04]  *** Contents of shared directory: ***
[2026-01-14 08:33:04] total 729440
[2026-01-14 08:33:04] -rw-r--r--. 2 boincer umatlas 592371088 Jan 14 07:39 ATLAS.root_0
[2026-01-14 08:33:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 07:39 start_atlas.sh
[2026-01-14 08:33:04] -rw-r--r--. 2 boincer umatlas    592392 Jan 14 07:39 input.tar.gz
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas 153176696 Jan 14 08:31 HITS.pool.root.1
[2026-01-14 08:33:04] -rw-------. 1 boincer umatlas    778240 Jan 14 08:33 result.tar.gz
08:33:05 (3551690): run_atlas exited; CPU time 14783.775860
08:33:05 (3551690): called boinc_finish(0)

</stderr_txt>
]]>

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