Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:32:15 (26227): wrapper (7.7.26015): starting
16:32:15 (26227): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 16:32:15] Arguments: --nthreads 8
[2026-01-14 16:32:15] Threads: 8
[2026-01-14 16:32:15] Checking for CVMFS
[2026-01-14 16:32:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 16:32:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 16:32:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 16:32:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 16:32:19] 2.11.2.0 2467 42798 128288 155136 3 61 24237662 25165824 96 130560 0 19368298 99.815 12199957 2923 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 16:32:19] CVMFS is ok
[2026-01-14 16:32:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 16:32:19] Checking for apptainer binary...
[2026-01-14 16:32:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 16:32:19] Running /usr/bin/apptainer --version
[2026-01-14 16:32:19] apptainer version 1.3.2-1.el7
[2026-01-14 16:32:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 16:32:30] cg-vwn487.simple-grid.lan
[2026-01-14 16:32:30] apptainer works
[2026-01-14 16:32:30] Set ATHENA_PROC_NUMBER=8
[2026-01-14 16:32:30] Set ATHENA_CORE_NUMBER=8
[2026-01-14 16:32:30] Starting ATLAS job with PandaID=6969308182
[2026-01-14 16:32:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 19:31:15]  *** The last 200 lines of the pilot log: ***
[2026-01-14 19:31:15] 2026-01-14 18:29:58,725 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 19:31:15] 2026-01-14 18:29:58,726 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-14 19:31:15] 2026-01-14 18:29:58,727 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6969308182/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 19:31:15] 2026-01-14 18:29:58,728 | INFO     | extracted standard info from prmon json
[2026-01-14 19:31:15] 2026-01-14 18:29:58,728 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 19:31:15] 2026-01-14 18:29:58,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 19:31:15] 2026-01-14 18:29:58,729 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 19:31:15] 2026-01-14 18:29:58,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 19:31:15] 2026-01-14 18:29:58,732 | INFO     | fitting pss+swap vs Time
[2026-01-14 19:31:15] 2026-01-14 18:29:58,733 | INFO     | sum of square deviations: 1270051720.0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,734 | INFO     | sum of deviations: 85211452477.0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,734 | INFO     | mean x: 1768410395.5
[2026-01-14 19:31:15] 2026-01-14 18:29:58,734 | INFO     | mean y: 2392997.1375
[2026-01-14 19:31:15] 2026-01-14 18:29:58,734 | INFO     | intersect: -118645388036.52074
[2026-01-14 19:31:15] 2026-01-14 18:29:58,741 | INFO     | chi2: 9.586624313222066
[2026-01-14 19:31:15] 2026-01-14 18:29:58,741 | INFO     | sum of square deviations: 1154663510.0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,742 | INFO     | sum of deviations: 92940534886.00002
[2026-01-14 19:31:15] 2026-01-14 18:29:58,742 | INFO     | mean x: 1768410243.0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,742 | INFO     | mean y: 2402852.9096774193
[2026-01-14 19:31:15] 2026-01-14 18:29:58,743 | INFO     | intersect: -142339493690.0072
[2026-01-14 19:31:15] 2026-01-14 18:29:58,743 | INFO     | chi2: 8.936816061662546
[2026-01-14 19:31:15] 2026-01-14 18:29:58,743 | INFO     | current chi2=8.936816061662546 (change=6.778280136244532 %)
[2026-01-14 19:31:15] 2026-01-14 18:29:58,743 | INFO     | right removable region: 154
[2026-01-14 19:31:15] 2026-01-14 18:29:58,744 | INFO     | sum of square deviations: 1154663510.0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,745 | INFO     | sum of deviations: 30232362805.0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,745 | INFO     | mean x: 1768410548.0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,745 | INFO     | mean y: 2465600.870967742
[2026-01-14 19:31:15] 2026-01-14 18:29:58,745 | INFO     | intersect: -46299533910.07302
[2026-01-14 19:31:15] 2026-01-14 18:29:58,745 | INFO     | chi2: 4.128777916847196
[2026-01-14 19:31:15] 2026-01-14 18:29:58,745 | INFO     | current chi2=4.128777916847196 (change=56.93188987125841 %)
[2026-01-14 19:31:15] 2026-01-14 18:29:58,746 | INFO     | sum of square deviations: 1046484737.5
[2026-01-14 19:31:15] 2026-01-14 18:29:58,747 | INFO     | sum of deviations: -12292572166.500002
[2026-01-14 19:31:15] 2026-01-14 18:29:58,747 | INFO     | mean x: 1768410700.5
[2026-01-14 19:31:15] 2026-01-14 18:29:58,747 | INFO     | mean y: 2525448.6066666665
[2026-01-14 19:31:15] 2026-01-14 18:29:58,747 | INFO     | intersect: 20775227980.168503
[2026-01-14 19:31:15] 2026-01-14 18:29:58,747 | INFO     | chi2: 1.1986093546303849
[2026-01-14 19:31:15] 2026-01-14 18:29:58,747 | INFO     | current chi2=1.1986093546303849 (change=70.96939145746877 %)
[2026-01-14 19:31:15] 2026-01-14 18:29:58,748 | INFO     | sum of square deviations: 945282840.0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,749 | INFO     | sum of deviations: -22432226497.999992
[2026-01-14 19:31:15] 2026-01-14 18:29:58,749 | INFO     | mean x: 1768410853.0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,749 | INFO     | mean y: 2540502.8206896554
[2026-01-14 19:31:15] 2026-01-14 18:29:58,749 | INFO     | intersect: 41968173557.174416
[2026-01-14 19:31:15] 2026-01-14 18:29:58,749 | INFO     | chi2: 0.900253195856923
[2026-01-14 19:31:15] 2026-01-14 18:29:58,750 | INFO     | current chi2=0.900253195856923 (change=24.891859688969802 %)
[2026-01-14 19:31:15] 2026-01-14 18:29:58,750 | INFO     | left removable region: 30
[2026-01-14 19:31:15] 2026-01-14 18:29:58,750 | INFO     | sum of square deviations: 591173875.0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,751 | INFO     | sum of deviations: 1925801109.9999995
[2026-01-14 19:31:15] 2026-01-14 18:29:58,751 | INFO     | mean x: 1768411127.5
[2026-01-14 19:31:15] 2026-01-14 18:29:58,751 | INFO     | mean y: 2530088.7258064514
[2026-01-14 19:31:15] 2026-01-14 18:29:58,751 | INFO     | intersect: -5758225344.311303
[2026-01-14 19:31:15] 2026-01-14 18:29:58,751 | INFO     | chi2: 0.0007413114749362042
[2026-01-14 19:31:15] 2026-01-14 18:29:58,751 | INFO     | current memory leak: 3.26 B/s (using 124 data points, chi2=0.00)
[2026-01-14 19:31:15] 2026-01-14 18:29:58,752 | INFO     | could have reported an average CPU frequency of 2249 MHz (9 samples)
[2026-01-14 19:31:15] 2026-01-14 18:29:58,752 | INFO     | ..............................
[2026-01-14 19:31:15] 2026-01-14 18:29:58,752 | INFO     | . Timing measurements:
[2026-01-14 19:31:15] 2026-01-14 18:29:58,752 | INFO     | . get job = 0 s
[2026-01-14 19:31:15] 2026-01-14 18:29:58,752 | INFO     | . initial setup = 11 s
[2026-01-14 19:31:15] 2026-01-14 18:29:58,753 | INFO     | . payload setup = 150 s
[2026-01-14 19:31:15] 2026-01-14 18:29:58,753 | INFO     | . stage-in = 0 s
[2026-01-14 19:31:15] 2026-01-14 18:29:58,753 | INFO     | . payload execution = 9903 s
[2026-01-14 19:31:15] 2026-01-14 18:29:58,753 | INFO     | . stage-out = 3 s
[2026-01-14 19:31:15] 2026-01-14 18:29:58,753 | INFO     | . log creation = 1 s
[2026-01-14 19:31:15] 2026-01-14 18:29:58,753 | INFO     | ..............................
[2026-01-14 19:31:15] 2026-01-14 18:29:58,788 | INFO     | time since job start (10393s) is within the limit (349056.0s)
[2026-01-14 19:31:15] 2026-01-14 18:29:58,904 | INFO     | 
[2026-01-14 19:31:15] 2026-01-14 18:29:58,904 | INFO     | job summary report
[2026-01-14 19:31:15] 2026-01-14 18:29:58,904 | INFO     | --------------------------------------------------
[2026-01-14 19:31:15] 2026-01-14 18:29:58,904 | INFO     | PanDA job id: 6969308182
[2026-01-14 19:31:15] 2026-01-14 18:29:58,904 | INFO     | task id: 48215263
[2026-01-14 19:31:15] 2026-01-14 18:29:58,904 | INFO     | errors: (none)
[2026-01-14 19:31:15] 2026-01-14 18:29:58,904 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 19:31:15] 2026-01-14 18:29:58,904 | INFO     | pilot state: finished 
[2026-01-14 19:31:15] 2026-01-14 18:29:58,904 | INFO     | transexitcode: 0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,905 | INFO     | exeerrorcode: 0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,905 | INFO     | exeerrordiag: 
[2026-01-14 19:31:15] 2026-01-14 18:29:58,905 | INFO     | exitcode: 0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,905 | INFO     | exitmsg: OK
[2026-01-14 19:31:15] 2026-01-14 18:29:58,905 | INFO     | cpuconsumptiontime: 34805 s
[2026-01-14 19:31:15] 2026-01-14 18:29:58,905 | INFO     | nevents: 400
[2026-01-14 19:31:15] 2026-01-14 18:29:58,905 | INFO     | neventsw: 0
[2026-01-14 19:31:15] 2026-01-14 18:29:58,905 | INFO     | pid: 4068
[2026-01-14 19:31:15] 2026-01-14 18:29:58,905 | INFO     | pgrp: 4068
[2026-01-14 19:31:15] 2026-01-14 18:29:58,905 | INFO     | corecount: 8
[2026-01-14 19:31:15] 2026-01-14 18:29:58,906 | INFO     | event service: False
[2026-01-14 19:31:15] 2026-01-14 18:29:58,906 | INFO     | sizes: {0: 2283722, 1: 2283977, 12: 2283977, 23: 2284005, 34: 2284033, 44: 2284061, 55: 2284217, 66: 2284245, 77: 2284273, 87: 2284329, 98: 2284357, 109: 2284665, 
[2026-01-14 19:31:15] 2026-01-14 18:29:58,906 | INFO     | --------------------------------------------------
[2026-01-14 19:31:15] 2026-01-14 18:29:58,906 | INFO     | 
[2026-01-14 19:31:15] 2026-01-14 18:29:58,906 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-14 19:31:15] 2026-01-14 18:29:59,636 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,636 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,636 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,636 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,637 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,637 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,637 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,638 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 19:31:15] 2026-01-14 18:29:59,638 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,638 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 19:31:15] 2026-01-14 18:29:59,638 | INFO     | job 6969308182 has completed (purged errors)
[2026-01-14 19:31:15] 2026-01-14 18:29:59,638 | INFO     | overall cleanup function is called
[2026-01-14 19:31:15] 2026-01-14 18:30:00,647 | INFO     | --- collectZombieJob: --- 10, [4068]
[2026-01-14 19:31:15] 2026-01-14 18:30:00,648 | INFO     | zombie collector waiting for pid 4068
[2026-01-14 19:31:15] 2026-01-14 18:30:00,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 19:31:15] 2026-01-14 18:30:00,648 | INFO     | collected zombie processes
[2026-01-14 19:31:15] 2026-01-14 18:30:00,648 | INFO     | will attempt to kill all subprocesses of pid=4068
[2026-01-14 19:31:15] 2026-01-14 18:30:00,726 | INFO     | process IDs to be killed: [4068] (in reverse order)
[2026-01-14 19:31:15] 2026-01-14 18:30:01,561 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 19:31:15] 2026-01-14 18:30:01,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 19:31:15] 2026-01-14 18:30:01,563 | INFO     | did not find any defunct processes belonging to 4068
[2026-01-14 19:31:15] 2026-01-14 18:30:01,565 | INFO     | did not find any defunct processes belonging to 4068
[2026-01-14 19:31:15] 2026-01-14 18:30:01,565 | INFO     | ready for new job
[2026-01-14 19:31:15] 2026-01-14 18:30:01,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 19:31:15] 2026-01-14 18:30:01,567 | INFO     | ***************************************
[2026-01-14 19:31:15] 2026-01-14 18:30:01,567 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 19:31:15] 2026-01-14 18:30:01,567 | INFO     | ***************************************
[2026-01-14 19:31:15] 2026-01-14 18:30:01,567 | INFO     | 
[2026-01-14 19:31:15] 2026-01-14 18:30:01,568 | INFO     | pilot is running in a VM
[2026-01-14 19:31:15] 2026-01-14 18:30:01,568 | INFO     | architecture information:
[2026-01-14 19:31:15] 2026-01-14 18:30:01,581 | INFO     | executing command: cat /etc/os-release
[2026-01-14 19:31:15] 2026-01-14 18:30:01,876 | INFO     | cat /etc/os-release:
[2026-01-14 19:31:15] NAME="CentOS Linux"
[2026-01-14 19:31:15] VERSION="7 (Core)"
[2026-01-14 19:31:15] ID="centos"
[2026-01-14 19:31:15] ID_LIKE="rhel fedora"
[2026-01-14 19:31:15] VERSION_ID="7"
[2026-01-14 19:31:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 19:31:15] ANSI_COLOR="0;31"
[2026-01-14 19:31:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 19:31:15] HOME_URL="https://www.centos.org/"
[2026-01-14 19:31:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 19:31:15] 
[2026-01-14 19:31:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 19:31:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 19:31:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 19:31:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 19:31:15] 
[2026-01-14 19:31:15] 2026-01-14 18:30:01,876 | INFO     | ***************************************
[2026-01-14 19:31:15] 2026-01-14 18:30:02,380 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-14 19:31:15] 2026-01-14 18:30:02,688 | INFO     | sufficient remaining disk space (494562967552 B)
[2026-01-14 19:31:15] 2026-01-14 18:30:02,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 19:31:15] 2026-01-14 18:30:02,689 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 19:31:15] 2026-01-14 18:30:02,689 | INFO     | update_server=False
[2026-01-14 19:31:15] 2026-01-14 18:30:02,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 19:31:15] 2026-01-14 18:30:03,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 19:31:15] 2026-01-14 18:30:03,600 | INFO     | all data control threads have been joined
[2026-01-14 19:31:15] 2026-01-14 18:30:03,645 | INFO     | all job control threads have been joined
[2026-01-14 19:31:15] 2026-01-14 18:30:03,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 19:31:15] 2026-01-14 18:30:03,674 | INFO     | aborting loop
[2026-01-14 19:31:15] 2026-01-14 18:30:03,685 | INFO     | all payload control threads have been joined
[2026-01-14 19:31:15] 2026-01-14 18:30:03,695 | INFO     | [job] retrieve thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:03,800 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:03,841 | INFO     | [payload] failed_post thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:03,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 19:31:15] 2026-01-14 18:30:04,297 | INFO     | [data] copytool_in thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:04,365 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:04,607 | INFO     | [data] control thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:04,652 | INFO     | [job] control thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:04,680 | INFO     | [job] job monitor thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:04,693 | INFO     | [payload] control thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:04,703 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:04,925 | INFO     | [job] queue monitor thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:04,939 | INFO     | [job] validate thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:05,138 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:05,258 | INFO     | [payload] validate_post thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:05,262 | INFO     | [data] copytool_out thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:06,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 19:31:15] 2026-01-14 18:30:10,158 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 19:31:15] 2026-01-14 18:30:31,961 | INFO     | PID=29950 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 19:31:15] 2026-01-14 18:30:31,961 | INFO     | .. there are 2 such processes running
[2026-01-14 19:31:15] 2026-01-14 18:30:31,961 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 19:31:15] 2026-01-14 18:30:31,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 19:31:15] 2026-01-14 18:30:31,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 19:31:15] 2026-01-14 18:31:02,312 | INFO     | [monitor] cgroup control has ended
[2026-01-14 19:31:15] 2026-01-14 18:31:04,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139934690559808)>', '<ExcThread(monitor, started 139934119749376)>']
[2026-01-14 19:31:15] 2026-01-14 18:31:04,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 19:31:15] 2026-01-14 18:31:04,154 | INFO     | [monitor] control thread has ended
[2026-01-14 19:31:15] 2026-01-14 18:31:09,101 | INFO     | all workflow threads have been joined
[2026-01-14 19:31:15] 2026-01-14 18:31:09,102 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 19:31:15] 2026-01-14 18:31:09,102 | INFO     | traces error code: 0
[2026-01-14 19:31:15] 2026-01-14 18:31:09,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 19:31:15] 2026-01-14 18:31:09,447 [wrapper] ==== pilot stdout END ====
[2026-01-14 19:31:15] 2026-01-14 18:31:09,504 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 19:31:15] 2026-01-14 18:31:09,605 [wrapper] pilotpid: 29950
[2026-01-14 19:31:15] 2026-01-14 18:31:09,679 [wrapper] Pilot exit status: 0
[2026-01-14 19:31:15] 2026-01-14 18:31:10,215 [wrapper] pandaids: 6969308182
[2026-01-14 19:31:15] 2026-01-14 18:31:11,270 [wrapper] cleanup supervisor_pilot 22498 29951
[2026-01-14 19:31:15] 2026-01-14 18:31:11,370 [wrapper] Test setup, not cleaning
[2026-01-14 19:31:15] 2026-01-14 18:31:11,462 [wrapper] apfmon messages muted
[2026-01-14 19:31:15] 2026-01-14 18:31:11,561 [wrapper] ==== wrapper stdout END ====
[2026-01-14 19:31:15] 2026-01-14 18:31:11,673 [wrapper] ==== wrapper stderr END ====
[2026-01-14 19:31:15]  *** Error codes and diagnostics ***
[2026-01-14 19:31:15]     "exeErrorCode": 0,
[2026-01-14 19:31:15]     "exeErrorDiag": "",
[2026-01-14 19:31:15]     "pilotErrorCode": 0,
[2026-01-14 19:31:15]     "pilotErrorDiag": "",
[2026-01-14 19:31:15]  *** Listing of results directory ***
[2026-01-14 19:31:15] total 740084
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc    579449 Jan 14 04:13 pilot3.tar.gz
[2026-01-14 19:31:15] -rwx------. 1 boinc boinc     36322 Jan 14 04:17 runpilot2-wrapper.sh
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc      5112 Jan 14 04:21 queuedata.json
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc       100 Jan 14 16:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 19:31:15] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 16:32 run_atlas
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc       105 Jan 14 16:32 job.xml
[2026-01-14 19:31:15] -rw-r--r--. 2 boinc boinc 597091332 Jan 14 16:32 EVNT.32794306._000543.pool.root.1
[2026-01-14 19:31:15] -rw-r--r--. 2 boinc boinc     15847 Jan 14 16:32 start_atlas.sh
[2026-01-14 19:31:15] drwxrwx--x. 2 boinc boinc        68 Jan 14 16:32 shared
[2026-01-14 19:31:15] -rw-r--r--. 2 boinc boinc    592404 Jan 14 16:32 input.tar.gz
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc      6390 Jan 14 16:32 init_data.xml
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc         0 Jan 14 16:32 boinc_lockfile
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc      2507 Jan 14 16:32 pandaJob.out
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc    997956 Jan 14 16:36 agis_schedconf.cvmfs.json
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc   1516246 Jan 14 16:36 agis_ddmendpoints.agis.ALL.json
[2026-01-14 19:31:15] drwx------. 5 boinc boinc      4096 Jan 14 16:36 pilot3
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc 153274513 Jan 14 19:26 HITS.48215263._013559.pool.root.1
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc       532 Jan 14 19:26 boinc_task_state.xml
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc      1015 Jan 14 19:27 memory_monitor_summary.json
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc    393631 Jan 14 19:28 log.48215263._013559.job.log.tgz.1
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc        95 Jan 14 19:29 pilot_heartbeat.json
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc      7773 Jan 14 19:29 heartbeat.json
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc      8192 Jan 14 19:30 boinc_mmap_file
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc        28 Jan 14 19:30 wrapper_checkpoint.txt
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc      4884 Jan 14 19:31 pilotlog.txt
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc   1392995 Jan 14 19:31 log.48215263._013559.job.log.1
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc       357 Jan 14 19:31 output.list
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc       620 Jan 14 19:31 runtime_log
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc   1802240 Jan 14 19:31 result.tar.gz
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc       655 Jan 14 19:31 z0RMDmiY6z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbvjKDmnhE6Io.diag
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc      8817 Jan 14 19:31 runtime_log.err
[2026-01-14 19:31:15] -rw-r--r--. 1 boinc boinc     20756 Jan 14 19:31 stderr.txt
[2026-01-14 19:31:15] HITS file was successfully produced:
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc 153274513 Jan 14 19:26 shared/HITS.pool.root.1
[2026-01-14 19:31:15]  *** Contents of shared directory: ***
[2026-01-14 19:31:15] total 735140
[2026-01-14 19:31:15] -rw-r--r--. 2 boinc boinc 597091332 Jan 14 16:32 ATLAS.root_0
[2026-01-14 19:31:15] -rw-r--r--. 2 boinc boinc     15847 Jan 14 16:32 start_atlas.sh
[2026-01-14 19:31:15] -rw-r--r--. 2 boinc boinc    592404 Jan 14 16:32 input.tar.gz
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc 153274513 Jan 14 19:26 HITS.pool.root.1
[2026-01-14 19:31:15] -rw-------. 1 boinc boinc   1802240 Jan 14 19:31 result.tar.gz
19:31:16 (26227): run_atlas exited; CPU time 34906.877951
19:31:16 (26227): called boinc_finish(0)

</stderr_txt>
]]>

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