Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:35:10 (1248831): wrapper (7.7.26015): starting
06:35:10 (1248831): wrapper: running run_atlas (--nthreads 9)
[2026-01-14 06:35:10] Arguments: --nthreads 9
[2026-01-14 06:35:10] Threads: 9
[2026-01-14 06:35:10] Checking for CVMFS
[2026-01-14 06:35:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 06:35:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 06:35:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 06:35:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 06:35:12] 2.13.3.0 6454 29340 262028 155130 2 507 31458340 40960000 9729 16776704 0 35617594 99.843 31682127 34298 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 06:35:12] CVMFS is ok
[2026-01-14 06:35:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 06:35:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 06:35:12] Further information can be found at the LHC@home message board.
[2026-01-14 06:35:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 06:35:12] Checking for apptainer binary...
[2026-01-14 06:35:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 06:35:12] Running /usr/bin/apptainer --version
[2026-01-14 06:35:12] apptainer version 1.4.5-2.el9
[2026-01-14 06:35:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 06:35:13] c-206-40.aglt2.org
[2026-01-14 06:35:13] apptainer works
[2026-01-14 06:35:13] Set ATHENA_PROC_NUMBER=9
[2026-01-14 06:35:13] Set ATHENA_CORE_NUMBER=9
[2026-01-14 06:35:13] Starting ATLAS job with PandaID=6969402734
[2026-01-14 06:35:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 07:51:23]  *** The last 200 lines of the pilot log: ***
[2026-01-14 07:51:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 07:51:23]  replicas=None
[2026-01-14 07:51:23]  scope=mc23_13p6TeV
[2026-01-14 07:51:23]  status=None
[2026-01-14 07:51:23]  status_code=0
[2026-01-14 07:51:23]  storage_token=
[2026-01-14 07:51:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969402734/log.48215263._017481.job.log.tgz.1
[2026-01-14 07:51:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/d0/log.48215263._017481.job.log.tgz.1
[2026-01-14 07:51:23]  workdir=None
[2026-01-14 07:51:23] ]
[2026-01-14 07:51:23] 2026-01-14 12:50:41,821 | INFO     | transferring file log.48215263._017481.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969402734/log.48215263._017481.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 07:51:23] 2026-01-14 12:50:41,821 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969402734/log.48215263._017481.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._017481.job
[2026-01-14 07:51:23] 2026-01-14 12:50:41,840 | INFO     | adding to output.list: log.48215263._017481.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/d0/log.48215263._017481.job.log.tg
[2026-01-14 07:51:23] 2026-01-14 12:50:41,840 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 07:51:23] 2026-01-14 12:50:41,840 | INFO     | summary of transferred files:
[2026-01-14 07:51:23] 2026-01-14 12:50:41,840 | INFO     |  -- lfn=log.48215263._017481.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 07:51:23] 2026-01-14 12:50:41,841 | INFO     | stage-out finished correctly
[2026-01-14 07:51:23] 2026-01-14 12:50:42,879 | INFO     | time since job start (4473s) is within the limit (349056.0s)
[2026-01-14 07:51:23] 2026-01-14 12:50:44,557 | WARNING  | process 1271115 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 07:51:23] 2026-01-14 12:50:44,558 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969402734/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 07:51:23] 2026-01-14 12:50:44,618 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 07:51:23] 2026-01-14 12:50:44,695 | INFO     | job 6969402734 has state=finished
[2026-01-14 07:51:23] 2026-01-14 12:50:44,697 | INFO     | preparing for final server update for job 6969402734 in state='finished'
[2026-01-14 07:51:23] 2026-01-14 12:50:44,698 | INFO     | this job has now completed (state=finished)
[2026-01-14 07:51:23] 2026-01-14 12:50:44,698 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 07:51:23] 2026-01-14 12:50:44,698 | INFO     | log transfer has been attempted: DONE
[2026-01-14 07:51:23] 2026-01-14 12:50:44,699 | INFO     | job 6969402734 has finished - writing final server update
[2026-01-14 07:51:23] 2026-01-14 12:50:44,699 | INFO     | total number of processed events: 400 (read)
[2026-01-14 07:51:23] 2026-01-14 12:50:44,700 | INFO     | executing command: lscpu
[2026-01-14 07:51:23] 2026-01-14 12:50:44,741 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 07:51:23] 2026-01-14 12:50:44,884 | INFO     | time since job start (4475s) is within the limit (349056.0s)
[2026-01-14 07:51:23] 2026-01-14 12:50:44,954 | INFO     | number of running child processes to parent process 1271115: 1
[2026-01-14 07:51:23] 2026-01-14 12:50:44,954 | INFO     | maximum number of monitored processes: 6
[2026-01-14 07:51:23] 2026-01-14 12:50:46,891 | INFO     | time since job start (4477s) is within the limit (349056.0s)
[2026-01-14 07:51:23] 2026-01-14 12:50:47,457 | INFO     | monitor loop #327: job 0:6969402734 is in state 'finished'
[2026-01-14 07:51:23] 2026-01-14 12:50:47,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 07:51:23] 2026-01-14 12:50:48,294 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 07:51:23] 2026-01-14 12:50:48,332 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3287.7568124999993
[2026-01-14 07:51:23] 2026-01-14 12:50:48,442 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969402734/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 07:51:23] 2026-01-14 12:50:48,443 | INFO     | extracted standard info from prmon json
[2026-01-14 07:51:23] 2026-01-14 12:50:48,443 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 07:51:23] 2026-01-14 12:50:48,443 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 07:51:23] 2026-01-14 12:50:48,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 07:51:23] 2026-01-14 12:50:48,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 07:51:23] 2026-01-14 12:50:48,482 | INFO     | fitting pss+swap vs Time
[2026-01-14 07:51:23] 2026-01-14 12:50:48,482 | INFO     | sum of square deviations: 85127218.46153864
[2026-01-14 07:51:23] 2026-01-14 12:50:48,482 | INFO     | sum of deviations: 1108154.5384615138
[2026-01-14 07:51:23] 2026-01-14 12:50:48,482 | INFO     | mean x: 1768392941.1538463
[2026-01-14 07:51:23] 2026-01-14 12:50:48,482 | INFO     | mean y: 2626662.446153846
[2026-01-14 07:51:23] 2026-01-14 12:50:48,483 | INFO     | intersect: -20393620.595378056
[2026-01-14 07:51:23] 2026-01-14 12:50:48,483 | INFO     | chi2: 0.07412697034213125
[2026-01-14 07:51:23] 2026-01-14 12:50:48,483 | INFO     | current memory leak: 0.01 B/s (using 65 data points, chi2=0.07)
[2026-01-14 07:51:23] 2026-01-14 12:50:48,483 | INFO     | could have reported an average CPU frequency of 3277 MHz (6 samples)
[2026-01-14 07:51:23] 2026-01-14 12:50:48,483 | INFO     | ..............................
[2026-01-14 07:51:23] 2026-01-14 12:50:48,483 | INFO     | . Timing measurements:
[2026-01-14 07:51:23] 2026-01-14 12:50:48,514 | INFO     | . get job = 0 s
[2026-01-14 07:51:23] 2026-01-14 12:50:48,514 | INFO     | . initial setup = 2 s
[2026-01-14 07:51:23] 2026-01-14 12:50:48,514 | INFO     | . payload setup = 30 s
[2026-01-14 07:51:23] 2026-01-14 12:50:48,514 | INFO     | . stage-in = 0 s
[2026-01-14 07:51:23] 2026-01-14 12:50:48,514 | INFO     | . payload execution = 4372 s
[2026-01-14 07:51:23] 2026-01-14 12:50:48,514 | INFO     | . stage-out = 0 s
[2026-01-14 07:51:23] 2026-01-14 12:50:48,514 | INFO     | . log creation = 0 s
[2026-01-14 07:51:23] 2026-01-14 12:50:48,514 | INFO     | ..............................
[2026-01-14 07:51:23] 2026-01-14 12:50:48,897 | INFO     | time since job start (4479s) is within the limit (349056.0s)
[2026-01-14 07:51:23] 2026-01-14 12:50:48,932 | INFO     | 
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | job summary report
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | --------------------------------------------------
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | PanDA job id: 6969402734
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | task id: 48215263
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | errors: (none)
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | pilot state: finished 
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | transexitcode: 0
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | exeerrorcode: 0
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | exeerrordiag: 
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | exitcode: 0
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | exitmsg: OK
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | cpuconsumptiontime: 22319 s
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | nevents: 400
[2026-01-14 07:51:23] 2026-01-14 12:50:48,933 | INFO     | neventsw: 0
[2026-01-14 07:51:23] 2026-01-14 12:50:48,934 | INFO     | pid: 1271115
[2026-01-14 07:51:23] 2026-01-14 12:50:48,934 | INFO     | pgrp: 1271115
[2026-01-14 07:51:23] 2026-01-14 12:50:48,934 | INFO     | corecount: 9
[2026-01-14 07:51:23] 2026-01-14 12:50:48,934 | INFO     | event service: False
[2026-01-14 07:51:23] 2026-01-14 12:50:48,934 | INFO     | sizes: {0: 2283949, 1: 2283977, 12: 2283977, 23: 2284005, 30: 2284295, 34: 2284323, 4407: 2319608, 4410: 2319608, 4414: 2319802}
[2026-01-14 07:51:23] 2026-01-14 12:50:48,934 | INFO     | --------------------------------------------------
[2026-01-14 07:51:23] 2026-01-14 12:50:48,934 | INFO     | 
[2026-01-14 07:51:23] 2026-01-14 12:50:48,934 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 07:51:23] 2026-01-14 12:50:48,953 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,953 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,953 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,955 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 07:51:23] 2026-01-14 12:50:48,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,955 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 07:51:23] 2026-01-14 12:50:48,955 | INFO     | job 6969402734 has completed (purged errors)
[2026-01-14 07:51:23] 2026-01-14 12:50:48,955 | INFO     | overall cleanup function is called
[2026-01-14 07:51:23] 2026-01-14 12:50:49,962 | INFO     | --- collectZombieJob: --- 10, [1271115]
[2026-01-14 07:51:23] 2026-01-14 12:50:49,963 | INFO     | zombie collector waiting for pid 1271115
[2026-01-14 07:51:23] 2026-01-14 12:50:49,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 07:51:23] 2026-01-14 12:50:49,963 | INFO     | collected zombie processes
[2026-01-14 07:51:23] 2026-01-14 12:50:49,963 | INFO     | will attempt to kill all subprocesses of pid=1271115
[2026-01-14 07:51:23] 2026-01-14 12:50:50,271 | INFO     | process IDs to be killed: [1271115] (in reverse order)
[2026-01-14 07:51:23] 2026-01-14 12:50:50,379 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 07:51:23] 2026-01-14 12:50:50,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 07:51:23] 2026-01-14 12:50:50,393 | INFO     | did not find any defunct processes belonging to 1271115
[2026-01-14 07:51:23] 2026-01-14 12:50:50,403 | INFO     | did not find any defunct processes belonging to 1271115
[2026-01-14 07:51:23] 2026-01-14 12:50:50,403 | INFO     | ready for new job
[2026-01-14 07:51:23] 2026-01-14 12:50:50,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 07:51:23] 2026-01-14 12:50:50,404 | INFO     | ***************************************
[2026-01-14 07:51:23] 2026-01-14 12:50:50,405 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 07:51:23] 2026-01-14 12:50:50,405 | INFO     | ***************************************
[2026-01-14 07:51:23] 2026-01-14 12:50:50,405 | INFO     | 
[2026-01-14 07:51:23] 2026-01-14 12:50:50,408 | INFO     | architecture information:
[2026-01-14 07:51:23] 2026-01-14 12:50:50,409 | INFO     | executing command: cat /etc/os-release
[2026-01-14 07:51:23] 2026-01-14 12:50:50,424 | INFO     | cat /etc/os-release:
[2026-01-14 07:51:23] NAME="CentOS Linux"
[2026-01-14 07:51:23] VERSION="7 (Core)"
[2026-01-14 07:51:23] ID="centos"
[2026-01-14 07:51:23] ID_LIKE="rhel fedora"
[2026-01-14 07:51:23] VERSION_ID="7"
[2026-01-14 07:51:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 07:51:23] ANSI_COLOR="0;31"
[2026-01-14 07:51:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 07:51:23] HOME_URL="https://www.centos.org/"
[2026-01-14 07:51:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 07:51:23] 
[2026-01-14 07:51:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 07:51:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 07:51:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 07:51:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 07:51:23] 
[2026-01-14 07:51:23] 2026-01-14 12:50:50,424 | INFO     | ***************************************
[2026-01-14 07:51:23] 2026-01-14 12:50:50,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 07:51:23] 2026-01-14 12:50:50,945 | INFO     | sufficient remaining disk space (81991303168 B)
[2026-01-14 07:51:23] 2026-01-14 12:50:50,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 07:51:23] 2026-01-14 12:50:50,946 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 07:51:23] 2026-01-14 12:50:50,946 | INFO     | update_server=False
[2026-01-14 07:51:23] 2026-01-14 12:50:50,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 07:51:23] 2026-01-14 12:50:50,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 07:51:23] 2026-01-14 12:50:50,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 07:51:23] 2026-01-14 12:50:50,979 | INFO     | aborting loop
[2026-01-14 07:51:23] 2026-01-14 12:50:51,116 | INFO     | all data control threads have been joined
[2026-01-14 07:51:23] 2026-01-14 12:50:51,951 | INFO     | [job] retrieve thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:51,985 | INFO     | [job] job monitor thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:52,027 | INFO     | all payload control threads have been joined
[2026-01-14 07:51:23] 2026-01-14 12:50:52,122 | INFO     | [data] control thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:52,392 | INFO     | all job control threads have been joined
[2026-01-14 07:51:23] 2026-01-14 12:50:52,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 07:51:23] 2026-01-14 12:50:52,570 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:52,605 | INFO     | [job] validate thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:52,712 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:53,004 | INFO     | [data] copytool_in thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:53,027 | INFO     | [payload] control thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:53,058 | INFO     | [payload] failed_post thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:53,118 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:53,370 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:53,396 | INFO     | [job] control thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:53,480 | INFO     | [payload] validate_post thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:53,674 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 07:51:23] 2026-01-14 12:50:54,437 | INFO     | [data] copytool_out thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:54,680 | INFO     | [job] queue monitor thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:50:54,954 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 07:51:23] 2026-01-14 12:51:07,199 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-14 07:51:23] 2026-01-14 12:51:16,586 | INFO     | [monitor] cgroup control has ended
[2026-01-14 07:51:23] 2026-01-14 12:51:18,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398418282304)>', '<ExcThread(monitor, started 140397984610048)>']
[2026-01-14 07:51:23] 2026-01-14 12:51:22,336 | INFO     | PID=1257608 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 07:51:23] 2026-01-14 12:51:22,337 | INFO     | .. there are 12 such processes running
[2026-01-14 07:51:23] 2026-01-14 12:51:22,337 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 07:51:23] 2026-01-14 12:51:22,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 07:51:23] 2026-01-14 12:51:22,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 07:51:23] 2026-01-14 12:51:22,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 07:51:23] 2026-01-14 12:51:22,338 | INFO     | [monitor] control thread has ended
[2026-01-14 07:51:23] 2026-01-14 12:51:23,302 | INFO     | all workflow threads have been joined
[2026-01-14 07:51:23] 2026-01-14 12:51:23,305 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 07:51:23] 2026-01-14 12:51:23,305 | INFO     | traces error code: 0
[2026-01-14 07:51:23] 2026-01-14 12:51:23,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 07:51:23] 2026-01-14 12:51:23,408 [wrapper] ==== pilot stdout END ====
[2026-01-14 07:51:23] 2026-01-14 12:51:23,411 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 07:51:23] 2026-01-14 12:51:23,414 [wrapper] pilotpid: 1257608
[2026-01-14 07:51:23] 2026-01-14 12:51:23,416 [wrapper] Pilot exit status: 0
[2026-01-14 07:51:23] 2026-01-14 12:51:23,428 [wrapper] pandaids: 6969402734
[2026-01-14 07:51:23] 2026-01-14 12:51:23,508 [wrapper] cleanup supervisor_pilot 1473194 1257609
[2026-01-14 07:51:23] 2026-01-14 12:51:23,511 [wrapper] Test setup, not cleaning
[2026-01-14 07:51:23] 2026-01-14 12:51:23,514 [wrapper] apfmon messages muted
[2026-01-14 07:51:23] 2026-01-14 12:51:23,518 [wrapper] ==== wrapper stdout END ====
[2026-01-14 07:51:23] 2026-01-14 12:51:23,520 [wrapper] ==== wrapper stderr END ====
[2026-01-14 07:51:23]  *** Error codes and diagnostics ***
[2026-01-14 07:51:23]     "exeErrorCode": 0,
[2026-01-14 07:51:23]     "exeErrorDiag": "",
[2026-01-14 07:51:23]     "pilotErrorCode": 0,
[2026-01-14 07:51:23]     "pilotErrorDiag": "",
[2026-01-14 07:51:23]  *** Listing of results directory ***
[2026-01-14 07:51:23] total 749548
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 02:33 pilot3.tar.gz
[2026-01-14 07:51:23] -rwx------. 1 boincer umatlas     36322 Jan 14 02:36 runpilot2-wrapper.sh
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 02:40 queuedata.json
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas       100 Jan 14 06:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 07:51:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 06:35 run_atlas
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas       105 Jan 14 06:35 job.xml
[2026-01-14 07:51:23] -rw-r--r--. 2 boincer umatlas 601177891 Jan 14 06:35 EVNT.32794306._000701.pool.root.1
[2026-01-14 07:51:23] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 06:35 shared
[2026-01-14 07:51:23] -rw-r--r--. 2 boincer umatlas    592399 Jan 14 06:35 input.tar.gz
[2026-01-14 07:51:23] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 06:35 start_atlas.sh
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas         0 Jan 14 06:35 boinc_lockfile
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas      2507 Jan 14 06:35 pandaJob.out
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas        57 Jan 14 06:35 setup.sh.local
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas    997566 Jan 14 06:36 agis_schedconf.cvmfs.json
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas   1516246 Jan 14 06:36 agis_ddmendpoints.agis.ALL.json
[2026-01-14 07:51:23] drwx------. 5 boincer umatlas      4096 Jan 14 06:36 pilot3
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas      6906 Jan 14 07:48 init_data.xml
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas 160485162 Jan 14 07:50 HITS.48215263._017481.pool.root.1
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas       531 Jan 14 07:50 boinc_task_state.xml
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas        95 Jan 14 07:50 pilot_heartbeat.json
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas      1028 Jan 14 07:50 memory_monitor_summary.json
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas    325936 Jan 14 07:50 log.48215263._017481.job.log.tgz.1
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas      7769 Jan 14 07:50 heartbeat.json
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 07:51 boinc_mmap_file
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas        27 Jan 14 07:51 wrapper_checkpoint.txt
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas      4824 Jan 14 07:51 pilotlog.txt
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas    651190 Jan 14 07:51 log.48215263._017481.job.log.1
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas       357 Jan 14 07:51 output.list
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas       620 Jan 14 07:51 runtime_log
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas    993280 Jan 14 07:51 result.tar.gz
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas      9342 Jan 14 07:51 runtime_log.err
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas       652 Jan 14 07:51 en2KDmibA08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqTkKDmJB2cxm.diag
[2026-01-14 07:51:23] -rw-r--r--. 1 boincer umatlas     21963 Jan 14 07:51 stderr.txt
[2026-01-14 07:51:23] HITS file was successfully produced:
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas 160485162 Jan 14 07:50 shared/HITS.pool.root.1
[2026-01-14 07:51:23]  *** Contents of shared directory: ***
[2026-01-14 07:51:23] total 745388
[2026-01-14 07:51:23] -rw-r--r--. 2 boincer umatlas 601177891 Jan 14 06:35 ATLAS.root_0
[2026-01-14 07:51:23] -rw-r--r--. 2 boincer umatlas    592399 Jan 14 06:35 input.tar.gz
[2026-01-14 07:51:23] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 06:35 start_atlas.sh
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas 160485162 Jan 14 07:50 HITS.pool.root.1
[2026-01-14 07:51:23] -rw-------. 1 boincer umatlas    993280 Jan 14 07:51 result.tar.gz
07:51:24 (1248831): run_atlas exited; CPU time 22394.011767
07:51:24 (1248831): called boinc_finish(0)

</stderr_txt>
]]>

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