Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:55:42 (2932): wrapper (7.7.26015): starting
05:55:42 (2932): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 05:55:42] Arguments: --nthreads 12
[2026-01-14 05:55:42] Threads: 12
[2026-01-14 05:55:42] Checking for CVMFS
[2026-01-14 05:55:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 05:55:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 05:55:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 05:55:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 05:55:42] 2.11.2.0 2916 358103 99684 155128 2 57 17120871 20275201 1 130560 1 150143056 99.944 22174634 17017 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 05:55:42] CVMFS is ok
[2026-01-14 05:55:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 05:55:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 05:55:42] Further information can be found at the LHC@home message board.
[2026-01-14 05:55:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 05:55:42] Checking for apptainer binary...
[2026-01-14 05:55:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 05:55:42] Running /usr/bin/apptainer --version
[2026-01-14 05:55:43] apptainer version 1.3.2-1.el7
[2026-01-14 05:55:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 05:55:44] c-205-23.aglt2.org
[2026-01-14 05:55:44] apptainer works
[2026-01-14 05:55:44] Set ATHENA_PROC_NUMBER=12
[2026-01-14 05:55:44] Set ATHENA_CORE_NUMBER=12
[2026-01-14 05:55:44] Starting ATLAS job with PandaID=6969402904
[2026-01-14 05:55:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 06:43:10]  *** The last 200 lines of the pilot log: ***
[2026-01-14 06:43:10]  mtime=0
[2026-01-14 06:43:10]  protocol_id=None
[2026-01-14 06:43:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 06:43:10]  replicas=None
[2026-01-14 06:43:10]  scope=mc23_13p6TeV
[2026-01-14 06:43:10]  status=None
[2026-01-14 06:43:10]  status_code=0
[2026-01-14 06:43:10]  storage_token=
[2026-01-14 06:43:10]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969402904/log.48215263._017611.job.log.tgz.1
[2026-01-14 06:43:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/08/log.48215263._017611.job.log.tgz.1
[2026-01-14 06:43:10]  workdir=None
[2026-01-14 06:43:10] ]
[2026-01-14 06:43:10] 2026-01-14 11:42:29,700 | INFO     | transferring file log.48215263._017611.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969402904/log.48215263._017611.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 06:43:10] 2026-01-14 11:42:29,701 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969402904/log.48215263._017611.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._017611.job
[2026-01-14 06:43:10] 2026-01-14 11:42:29,722 | INFO     | adding to output.list: log.48215263._017611.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/08/log.48215263._017611.job.log.tg
[2026-01-14 06:43:10] 2026-01-14 11:42:29,723 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 06:43:10] 2026-01-14 11:42:29,723 | INFO     | summary of transferred files:
[2026-01-14 06:43:10] 2026-01-14 11:42:29,724 | INFO     |  -- lfn=log.48215263._017611.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 06:43:10] 2026-01-14 11:42:29,724 | INFO     | stage-out finished correctly
[2026-01-14 06:43:10] 2026-01-14 11:42:29,810 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 06:43:10] 2026-01-14 11:42:29,890 | INFO     | job 6969402904 has state=finished
[2026-01-14 06:43:10] 2026-01-14 11:42:29,890 | INFO     | preparing for final server update for job 6969402904 in state='finished'
[2026-01-14 06:43:10] 2026-01-14 11:42:29,891 | INFO     | this job has now completed (state=finished)
[2026-01-14 06:43:10] 2026-01-14 11:42:29,891 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 06:43:10] 2026-01-14 11:42:29,891 | INFO     | log transfer has been attempted: DONE
[2026-01-14 06:43:10] 2026-01-14 11:42:29,891 | INFO     | job 6969402904 has finished - writing final server update
[2026-01-14 06:43:10] 2026-01-14 11:42:29,892 | INFO     | total number of processed events: 400 (read)
[2026-01-14 06:43:10] 2026-01-14 11:42:29,892 | INFO     | executing command: lscpu
[2026-01-14 06:43:10] 2026-01-14 11:42:29,917 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 06:43:10] 2026-01-14 11:42:31,639 | INFO     | time since job start (2792s) is within the limit (349056.0s)
[2026-01-14 06:43:10] 2026-01-14 11:42:33,645 | INFO     | time since job start (2794s) is within the limit (349056.0s)
[2026-01-14 06:43:10] 2026-01-14 11:42:34,962 | WARNING  | process 13046 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 06:43:10] 2026-01-14 11:42:34,962 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969402904/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 06:43:10] 2026-01-14 11:42:35,051 | INFO     | number of running child processes to parent process 13046: 1
[2026-01-14 06:43:10] 2026-01-14 11:42:35,051 | INFO     | maximum number of monitored processes: 6
[2026-01-14 06:43:10] 2026-01-14 11:42:35,614 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 06:43:10] 2026-01-14 11:42:35,618 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-14 06:43:10] 2026-01-14 11:42:35,620 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969402904/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 06:43:10] 2026-01-14 11:42:35,621 | INFO     | extracted standard info from prmon json
[2026-01-14 06:43:10] 2026-01-14 11:42:35,621 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 06:43:10] 2026-01-14 11:42:35,621 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 06:43:10] 2026-01-14 11:42:35,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 06:43:10] 2026-01-14 11:42:35,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 06:43:10] 2026-01-14 11:42:35,624 | INFO     | fitting pss+swap vs Time
[2026-01-14 06:43:10] 2026-01-14 11:42:35,624 | INFO     | sum of square deviations: 18381740.0
[2026-01-14 06:43:10] 2026-01-14 11:42:35,624 | INFO     | sum of deviations: -2052798596.0
[2026-01-14 06:43:10] 2026-01-14 11:42:35,625 | INFO     | mean x: 1768389652.0
[2026-01-14 06:43:10] 2026-01-14 11:42:35,625 | INFO     | mean y: 2776481.0
[2026-01-14 06:43:10] 2026-01-14 11:42:35,625 | INFO     | intersect: 197489401512.5002
[2026-01-14 06:43:10] 2026-01-14 11:42:35,625 | INFO     | chi2: 0.03733772607367287
[2026-01-14 06:43:10] 2026-01-14 11:42:35,625 | INFO     | current memory leak: -111.68 B/s (using 39 data points, chi2=0.04)
[2026-01-14 06:43:10] 2026-01-14 11:42:35,626 | INFO     | could have reported an average CPU frequency of 1930 MHz (5 samples)
[2026-01-14 06:43:10] 2026-01-14 11:42:35,626 | INFO     | ..............................
[2026-01-14 06:43:10] 2026-01-14 11:42:35,626 | INFO     | . Timing measurements:
[2026-01-14 06:43:10] 2026-01-14 11:42:35,626 | INFO     | . get job = 0 s
[2026-01-14 06:43:10] 2026-01-14 11:42:35,627 | INFO     | . initial setup = 2 s
[2026-01-14 06:43:10] 2026-01-14 11:42:35,627 | INFO     | . payload setup = 7 s
[2026-01-14 06:43:10] 2026-01-14 11:42:35,627 | INFO     | . stage-in = 0 s
[2026-01-14 06:43:10] 2026-01-14 11:42:35,627 | INFO     | . payload execution = 2762 s
[2026-01-14 06:43:10] 2026-01-14 11:42:35,627 | INFO     | . stage-out = 0 s
[2026-01-14 06:43:10] 2026-01-14 11:42:35,627 | INFO     | . log creation = 0 s
[2026-01-14 06:43:10] 2026-01-14 11:42:35,627 | INFO     | ..............................
[2026-01-14 06:43:10] 2026-01-14 11:42:35,656 | INFO     | time since job start (2796s) is within the limit (349056.0s)
[2026-01-14 06:43:10] 2026-01-14 11:42:35,708 | INFO     | 
[2026-01-14 06:43:10] 2026-01-14 11:42:35,709 | INFO     | job summary report
[2026-01-14 06:43:10] 2026-01-14 11:42:35,709 | INFO     | --------------------------------------------------
[2026-01-14 06:43:10] 2026-01-14 11:42:35,709 | INFO     | PanDA job id: 6969402904
[2026-01-14 06:43:10] 2026-01-14 11:42:35,709 | INFO     | task id: 48215263
[2026-01-14 06:43:10] 2026-01-14 11:42:35,709 | INFO     | errors: (none)
[2026-01-14 06:43:10] 2026-01-14 11:42:35,709 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 06:43:10] 2026-01-14 11:42:35,710 | INFO     | pilot state: finished 
[2026-01-14 06:43:10] 2026-01-14 11:42:35,710 | INFO     | transexitcode: 0
[2026-01-14 06:43:10] 2026-01-14 11:42:35,710 | INFO     | exeerrorcode: 0
[2026-01-14 06:43:10] 2026-01-14 11:42:35,710 | INFO     | exeerrordiag: 
[2026-01-14 06:43:10] 2026-01-14 11:42:35,710 | INFO     | exitcode: 0
[2026-01-14 06:43:10] 2026-01-14 11:42:35,710 | INFO     | exitmsg: OK
[2026-01-14 06:43:10] 2026-01-14 11:42:35,710 | INFO     | cpuconsumptiontime: 29363 s
[2026-01-14 06:43:10] 2026-01-14 11:42:35,710 | INFO     | nevents: 400
[2026-01-14 06:43:10] 2026-01-14 11:42:35,711 | INFO     | neventsw: 0
[2026-01-14 06:43:10] 2026-01-14 11:42:35,711 | INFO     | pid: 13046
[2026-01-14 06:43:10] 2026-01-14 11:42:35,711 | INFO     | pgrp: 13046
[2026-01-14 06:43:10] 2026-01-14 11:42:35,711 | INFO     | corecount: 12
[2026-01-14 06:43:10] 2026-01-14 11:42:35,711 | INFO     | event service: False
[2026-01-14 06:43:10] 2026-01-14 11:42:35,711 | INFO     | sizes: {0: 2283948, 1: 2283948, 5: 2284238, 11: 2284294, 2772: 2309536, 2773: 2309535, 2774: 2318773, 2780: 2318943}
[2026-01-14 06:43:10] 2026-01-14 11:42:35,711 | INFO     | --------------------------------------------------
[2026-01-14 06:43:10] 2026-01-14 11:42:35,712 | INFO     | 
[2026-01-14 06:43:10] 2026-01-14 11:42:35,712 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 06:43:10] 2026-01-14 11:42:35,735 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,735 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,735 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,735 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,738 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 06:43:10] 2026-01-14 11:42:35,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,738 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 06:43:10] 2026-01-14 11:42:35,738 | INFO     | job 6969402904 has completed (purged errors)
[2026-01-14 06:43:10] 2026-01-14 11:42:35,738 | INFO     | overall cleanup function is called
[2026-01-14 06:43:10] 2026-01-14 11:42:36,746 | INFO     | --- collectZombieJob: --- 10, [13046]
[2026-01-14 06:43:10] 2026-01-14 11:42:36,746 | INFO     | zombie collector waiting for pid 13046
[2026-01-14 06:43:10] 2026-01-14 11:42:36,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 06:43:10] 2026-01-14 11:42:36,747 | INFO     | collected zombie processes
[2026-01-14 06:43:10] 2026-01-14 11:42:36,747 | INFO     | will attempt to kill all subprocesses of pid=13046
[2026-01-14 06:43:10] 2026-01-14 11:42:36,835 | INFO     | process IDs to be killed: [13046] (in reverse order)
[2026-01-14 06:43:10] 2026-01-14 11:42:36,881 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 06:43:10] 2026-01-14 11:42:36,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 06:43:10] 2026-01-14 11:42:36,885 | INFO     | did not find any defunct processes belonging to 13046
[2026-01-14 06:43:10] 2026-01-14 11:42:36,888 | INFO     | did not find any defunct processes belonging to 13046
[2026-01-14 06:43:10] 2026-01-14 11:42:36,888 | INFO     | ready for new job
[2026-01-14 06:43:10] 2026-01-14 11:42:36,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 06:43:10] 2026-01-14 11:42:36,890 | INFO     | ***************************************
[2026-01-14 06:43:10] 2026-01-14 11:42:36,890 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 06:43:10] 2026-01-14 11:42:36,890 | INFO     | ***************************************
[2026-01-14 06:43:10] 2026-01-14 11:42:36,890 | INFO     | 
[2026-01-14 06:43:10] 2026-01-14 11:42:36,891 | INFO     | architecture information:
[2026-01-14 06:43:10] 2026-01-14 11:42:36,891 | INFO     | executing command: cat /etc/os-release
[2026-01-14 06:43:10] 2026-01-14 11:42:36,905 | INFO     | cat /etc/os-release:
[2026-01-14 06:43:10] NAME="CentOS Linux"
[2026-01-14 06:43:10] VERSION="7 (Core)"
[2026-01-14 06:43:10] ID="centos"
[2026-01-14 06:43:10] ID_LIKE="rhel fedora"
[2026-01-14 06:43:10] VERSION_ID="7"
[2026-01-14 06:43:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 06:43:10] ANSI_COLOR="0;31"
[2026-01-14 06:43:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 06:43:10] HOME_URL="https://www.centos.org/"
[2026-01-14 06:43:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 06:43:10] 
[2026-01-14 06:43:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 06:43:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 06:43:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 06:43:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 06:43:10] 
[2026-01-14 06:43:10] 2026-01-14 11:42:36,905 | INFO     | ***************************************
[2026-01-14 06:43:10] 2026-01-14 11:42:37,408 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 06:43:10] 2026-01-14 11:42:37,424 | INFO     | sufficient remaining disk space (28631367680 B)
[2026-01-14 06:43:10] 2026-01-14 11:42:37,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 06:43:10] 2026-01-14 11:42:37,424 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 06:43:10] 2026-01-14 11:42:37,425 | INFO     | update_server=False
[2026-01-14 06:43:10] 2026-01-14 11:42:37,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 06:43:10] 2026-01-14 11:42:37,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 06:43:10] 2026-01-14 11:42:37,425 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-14 06:43:10] 2026-01-14 11:42:37,426 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 06:43:10] 2026-01-14 11:42:37,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 06:43:10] 2026-01-14 11:42:37,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 06:43:10] 2026-01-14 11:42:37,554 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-14 06:43:10] 2026-01-14 11:42:37,554 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-14 06:43:10] 2026-01-14 11:42:37,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 06:43:10] 2026-01-14 11:42:37,555 | INFO     | will abort loop
[2026-01-14 06:43:10] 2026-01-14 11:42:37,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 06:43:10] 2026-01-14 11:42:38,204 | INFO     | all job control threads have been joined
[2026-01-14 06:43:10] 2026-01-14 11:42:38,430 | INFO     | [job] retrieve thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:38,431 | INFO     | all data control threads have been joined
[2026-01-14 06:43:10] 2026-01-14 11:42:38,431 | INFO     | [job] queue monitor thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:38,560 | INFO     | [job] job monitor thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:38,850 | INFO     | [job] validate thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:38,913 | INFO     | all payload control threads have been joined
[2026-01-14 06:43:10] 2026-01-14 11:42:39,049 | INFO     | [payload] failed_post thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:39,200 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:39,207 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:39,209 | INFO     | [job] control thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:39,436 | INFO     | [data] control thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:39,635 | INFO     | [payload] validate_post thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:39,791 | INFO     | [data] copytool_in thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:39,825 | INFO     | [data] copytool_out thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:39,898 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:39,916 | INFO     | [payload] control thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:40,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 06:43:10] 2026-01-14 11:42:44,405 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:42:47,861 | INFO     | job.realtimelogging is not enabled
[2026-01-14 06:43:10] 2026-01-14 11:42:48,862 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 06:43:10] 2026-01-14 11:43:03,393 | INFO     | [monitor] cgroup control has ended
[2026-01-14 06:43:10] 2026-01-14 11:43:04,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456857679680)>', '<ExcThread(monitor, started 140455756949248)>']
[2026-01-14 06:43:10] 2026-01-14 11:43:05,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 06:43:10] 2026-01-14 11:43:05,564 | INFO     | [monitor] control thread has ended
[2026-01-14 06:43:10] 2026-01-14 11:43:09,720 | INFO     | all workflow threads have been joined
[2026-01-14 06:43:10] 2026-01-14 11:43:09,721 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 06:43:10] 2026-01-14 11:43:09,721 | INFO     | traces error code: 0
[2026-01-14 06:43:10] 2026-01-14 11:43:09,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 06:43:10] 2026-01-14 11:43:09,807 [wrapper] ==== pilot stdout END ====
[2026-01-14 06:43:10] 2026-01-14 11:43:09,811 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 06:43:10] 2026-01-14 11:43:09,815 [wrapper] pilotpid: 6616
[2026-01-14 06:43:10] 2026-01-14 11:43:09,819 [wrapper] Pilot exit status: 0
[2026-01-14 06:43:10] 2026-01-14 11:43:09,835 [wrapper] pandaids: 6969402904
[2026-01-14 06:43:10] 2026-01-14 11:43:09,873 [wrapper] cleanup supervisor_pilot 32031 6617
[2026-01-14 06:43:10] 2026-01-14 11:43:09,877 [wrapper] Test setup, not cleaning
[2026-01-14 06:43:10] 2026-01-14 11:43:09,880 [wrapper] apfmon messages muted
[2026-01-14 06:43:10] 2026-01-14 11:43:09,884 [wrapper] ==== wrapper stdout END ====
[2026-01-14 06:43:10] 2026-01-14 11:43:09,888 [wrapper] ==== wrapper stderr END ====
[2026-01-14 06:43:10]  *** Error codes and diagnostics ***
[2026-01-14 06:43:10]     "exeErrorCode": 0,
[2026-01-14 06:43:10]     "exeErrorDiag": "",
[2026-01-14 06:43:10]     "pilotErrorCode": 0,
[2026-01-14 06:43:10]     "pilotErrorDiag": "",
[2026-01-14 06:43:10]  *** Listing of results directory ***
[2026-01-14 06:43:10] total 737224
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 02:33 pilot3.tar.gz
[2026-01-14 06:43:10] -rwx------ 1 boincer umatlas     36322 Jan 14 02:33 runpilot2-wrapper.sh
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 02:34 queuedata.json
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas       100 Jan 14 05:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 06:43:10] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 05:55 run_atlas
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas       105 Jan 14 05:55 job.xml
[2026-01-14 06:43:10] -rw-r--r-- 2 boincer umatlas 597403320 Jan 14 05:55 EVNT.32794306._000706.pool.root.1
[2026-01-14 06:43:10] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 05:55 start_atlas.sh
[2026-01-14 06:43:10] drwxrwx--x 2 boincer umatlas      4096 Jan 14 05:55 shared
[2026-01-14 06:43:10] -rw-r--r-- 2 boincer umatlas    592404 Jan 14 05:55 input.tar.gz
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas         0 Jan 14 05:55 boinc_lockfile
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas      2506 Jan 14 05:55 pandaJob.out
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas        57 Jan 14 05:55 setup.sh.local
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas    997226 Jan 14 05:55 agis_schedconf.cvmfs.json
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas   1516246 Jan 14 05:55 agis_ddmendpoints.agis.ALL.json
[2026-01-14 06:43:10] drwx------ 5 boincer umatlas      4096 Jan 14 05:55 pilot3
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas      5952 Jan 14 06:36 init_data.xml
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas 152019835 Jan 14 06:42 HITS.48215263._017611.pool.root.1
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas       530 Jan 14 06:42 boinc_task_state.xml
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas      1057 Jan 14 06:42 memory_monitor_summary.json
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas    356797 Jan 14 06:42 log.48215263._017611.job.log.tgz.1
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas        95 Jan 14 06:42 pilot_heartbeat.json
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas      7850 Jan 14 06:42 heartbeat.json
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 06:42 boinc_mmap_file
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas        27 Jan 14 06:42 wrapper_checkpoint.txt
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas      4810 Jan 14 06:43 pilotlog.txt
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas    426058 Jan 14 06:43 log.48215263._017611.job.log.1
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas       357 Jan 14 06:43 output.list
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas       620 Jan 14 06:43 runtime_log
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas    798720 Jan 14 06:43 result.tar.gz
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas      9344 Jan 14 06:43 runtime_log.err
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas       659 Jan 14 06:43 QPaNDmpYA08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwJkKDm0VUy8m.diag
[2026-01-14 06:43:10] -rw-r--r-- 1 boincer umatlas     21620 Jan 14 06:43 stderr.txt
[2026-01-14 06:43:10] HITS file was successfully produced:
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas 152019835 Jan 14 06:42 shared/HITS.pool.root.1
[2026-01-14 06:43:10]  *** Contents of shared directory: ***
[2026-01-14 06:43:10] total 733248
[2026-01-14 06:43:10] -rw-r--r-- 2 boincer umatlas 597403320 Jan 14 05:55 ATLAS.root_0
[2026-01-14 06:43:10] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 05:55 start_atlas.sh
[2026-01-14 06:43:10] -rw-r--r-- 2 boincer umatlas    592404 Jan 14 05:55 input.tar.gz
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas 152019835 Jan 14 06:42 HITS.pool.root.1
[2026-01-14 06:43:10] -rw------- 1 boincer umatlas    798720 Jan 14 06:43 result.tar.gz
06:43:11 (2932): run_atlas exited; CPU time 29344.205809
06:43:11 (2932): called boinc_finish(0)

</stderr_txt>
]]>

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