Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-16 17:17:52 (9644): vboxwrapper version 26210
2026-01-16 17:18:16 (9644): BOINC client version: 8.0.2
2026-01-16 17:19:00 (9644): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-01-16 17:19:12 (9644): Successfully copied 'init_data.xml' to the shared directory.
2026-01-16 17:19:25 (9644): Create VM. (boinc_166ec8f3282b5ee0, slot#2)
2026-01-16 17:20:33 (9644): Setting Memory Size for VM. (4800MB)
2026-01-16 17:21:02 (9644): Setting CPU Count for VM. (8)
2026-01-16 17:21:30 (9644): Setting Chipset Options for VM.
2026-01-16 17:21:37 (9644): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-16 17:21:43 (9644): Setting Boot Options for VM.
2026-01-16 17:22:16 (9644): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-16 17:22:24 (9644): Enabling VM Network Access.
2026-01-16 17:22:37 (9644): Disabling USB Support for VM.
2026-01-16 17:22:37 (9644): Disabling COM Port Support for VM.
2026-01-16 17:22:38 (9644): Disabling LPT Port Support for VM.
2026-01-16 17:22:38 (9644): Disabling Audio Support for VM.
2026-01-16 17:22:38 (9644): Disabling Clipboard Support for VM.
2026-01-16 17:22:38 (9644): Disabling Drag and Drop Support for VM.
2026-01-16 17:22:39 (9644): Adding storage controller(s) to VM.
2026-01-16 17:22:39 (9644): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-16 17:22:41 (9644): Adding VirtualBox Guest Additions to VM.
2026-01-16 17:22:41 (9644): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-16 17:22:42 (9644): forwarding host port 59082 to guest port 80
2026-01-16 17:22:42 (9644): Enabling remote desktop for VM.
2026-01-16 17:22:42 (9644): Required extension pack not installed, remote desktop not enabled.
2026-01-16 17:22:42 (9644): Enabling shared directory for VM.
2026-01-16 17:22:43 (9644): Starting VM using VBoxManage interface. (boinc_166ec8f3282b5ee0, slot#2)
2026-01-16 17:22:48 (9644): Successfully started VM. (PID = '23384')
2026-01-16 17:22:48 (9644): Reporting VM Process ID to BOINC.
2026-01-16 17:22:48 (9644): Guest Log: BIOS: VirtualBox 7.0.6
2026-01-16 17:22:48 (9644): Guest Log: CPUID EDX: 0x178bfbff
2026-01-16 17:22:48 (9644): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-16 17:22:48 (9644): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-16 17:22:48 (9644): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-16 17:22:48 (9644): Detected: Web Application Enabled (http://localhost:59082)
2026-01-16 17:22:48 (9644): Preference change detected
2026-01-16 17:22:48 (9644): Setting CPU throttle for VM. (75%)
2026-01-16 17:22:48 (9644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-16 17:22:50 (9644): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-16 17:22:50 (9644): Guest Log: BIOS: Booting from Hard Disk...
2026-01-16 17:22:53 (9644): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-16 17:22:53 (9644): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-16 17:22:53 (9644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-16 17:22:58 (9644): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-16 17:22:58 (9644): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-16 17:23:13 (9644): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-16 17:23:18 (9644): Guest Log: 00:00:00.000206 main     Log opened 2026-01-16T17:23:01.743406000Z
2026-01-16 17:23:18 (9644): Guest Log: 00:00:00.000325 main     OS Product: Linux
2026-01-16 17:23:18 (9644): Guest Log: 00:00:00.000354 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-16 17:23:24 (9644): Guest Log: 00:00:00.000378 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-16 17:23:24 (9644): Guest Log: 00:00:00.000401 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-16 17:23:31 (9644): Guest Log: 00:00:00.000401 main     Process ID: 1390
2026-01-16 17:23:31 (9644): Guest Log: 00:00:00.000401 main     Package type: LINUX_64BITS_GENERIC
2026-01-16 17:23:48 (9644): Guest Log: 00:00:00.002072 main     5.2.32 r132073 started. Verbose level = 0
2026-01-16 17:23:52 (9644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-16 17:23:52 (9644): Guest Log: [INFO] Mounting shared directory
2026-01-16 17:23:57 (9644): Guest Log: [INFO] Checking for init_data.xml
2026-01-16 17:23:57 (9644): Guest Log: 00:00:10.013239 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 788 526 138 000ns (GuestNow=1 768 555 393 221 631 000 ns GuestLast=1 768 584 181 747 769 000 ns fSetTimeLastLoop=true )
2026-01-16 17:24:05 (9644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-16 17:24:17 (9644): Guest Log: [INFO] Detected branch: prod
2026-01-16 17:24:17 (9644): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-16 17:24:22 (9644): Guest Log: Copying input files
2026-01-16 17:24:22 (9644): Guest Log: Copied input files into RunAtlas.
2026-01-16 17:24:22 (9644): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-16 17:24:22 (9644): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-16 17:24:22 (9644): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-16 17:24:22 (9644): Guest Log: Further information can be found at the LHC@home message board.
2026-01-16 17:24:53 (9644): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-16 17:24:53 (9644): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-16 17:24:53 (9644): Guest Log: 2.6.3.0 1689 1 32176 155202 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-16 17:24:53 (9644): Guest Log: copied the webapp to /var/www
2026-01-16 17:24:53 (9644): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-16 17:24:53 (9644): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-16 17:24:53 (9644): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-16 17:25:02 (9644): Guest Log:  *** Starting ATLAS job. (PandaID=6969307142 taskID=48215263) ***
2026-01-16 18:40:25 (9644): Guest Log:  *** Job finished ***
2026-01-16 18:40:25 (9644): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:11,839 | INFO     | all workflow threads have been joined
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:11,840 | INFO     | end of generic workflow (traces error code: 0)
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:11,840 | INFO     | traces error code: 0
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:11,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:23,262 | INFO     | PID=6146 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:23,263 | INFO     | found 0 job(s) in 20 queues
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:23,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:23,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:23,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:23,263 | INFO     | [monitor] control thread has ended
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:23,325 [wrapper] ==== pilot stdout END ====
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:23,331 [wrapper] ==== wrapper stdout RESUME ====
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:23,369 [wrapper] pilotpid: 6146
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:23,373 [wrapper] Pilot exit status: 0
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:24,776 [wrapper] pandaids: 6969307142
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:24,813 [wrapper] cleanup supervisor_pilot 25879 6147
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:24,818 [wrapper] Test setup, not cleaning
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:24,823 [wrapper] apfmon messages muted
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:24,828 [wrapper] ==== wrapper stdout END ====
2026-01-16 18:40:25 (9644): Guest Log: 2026-01-16 10:40:24,833 [wrapper] ==== wrapper stderr END ====
2026-01-16 18:40:25 (9644): Guest Log:  *** Error codes and diagnostics ***
2026-01-16 18:40:25 (9644): Guest Log:     "exeErrorCode": 0,
2026-01-16 18:40:25 (9644): Guest Log:     "exeErrorDiag": "",
2026-01-16 18:40:25 (9644): Guest Log:     "pilotErrorCode": 0,
2026-01-16 18:40:25 (9644): Guest Log:     "pilotErrorDiag": "",
2026-01-16 18:40:25 (9644): Guest Log:  *** Listing of results directory ***
2026-01-16 18:40:25 (9644): Guest Log: total 153796
2026-01-16 18:40:25 (9644): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan 14 03:13 pilot3.tar.gz
2026-01-16 18:40:25 (9644): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 14 03:13 runpilot2-wrapper.sh
2026-01-16 18:40:25 (9644): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan 14 03:15 queuedata.json
2026-01-16 18:40:25 (9644): Guest Log: -rwxr-xr-x. 1 atlas atlas      9180 Jan 16 09:24 init_data.xml
2026-01-16 18:40:25 (9644): Guest Log: -rwxr-xr-x. 1 atlas atlas    592400 Jan 16 09:24 input.tar.gz
2026-01-16 18:40:25 (9644): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 16 09:24 start_atlas.sh
2026-01-16 18:40:25 (9644): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 16 09:24 EVNT.32794306._000518.pool.root.1 -> /data/./ATLAS.root_0
2026-01-16 18:40:25 (9644): Guest Log: -rw-r--r--. 1 atlas atlas      2507 Jan 16 09:24 pandaJob.out
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas   1004067 Jan 16 09:29 agis_schedconf.cvmfs.json
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 16 09:29 agis_ddmendpoints.agis.ALL.json
2026-01-16 18:40:25 (9644): Guest Log: drwx------. 5 atlas atlas      4096 Jan 16 09:29 pilot3
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas 151832728 Jan 16 10:39 HITS.48215263._012941.pool.root.1
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas      1028 Jan 16 10:39 memory_monitor_summary.json
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas    318324 Jan 16 10:39 log.48215263._012941.job.log.tgz.1
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas      7818 Jan 16 10:39 heartbeat.json
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas       744 Jan 16 10:40 pilotlog.txt
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas        95 Jan 16 10:40 pilot_heartbeat.json
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas    579269 Jan 16 10:40 log.48215263._012941.job.log.1
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas       357 Jan 16 10:40 output.list
2026-01-16 18:40:25 (9644): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 16 10:40 runtime_log
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas    921600 Jan 16 10:40 result.tar.gz
2026-01-16 18:40:25 (9644): Guest Log: -rw-r--r--. 1 atlas atlas      8776 Jan 16 10:40 runtime_log.err
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas       658 Jan 16 10:40 mOBLDmUV6z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmejjKDmdwk3Zn.diag
2026-01-16 18:40:25 (9644): Guest Log: Looking for outputfile HITS.48215263._012941.pool.root.1
2026-01-16 18:40:25 (9644): Guest Log: HITS file was successfully produced
2026-01-16 18:40:25 (9644): Guest Log: -rw-------. 1 atlas atlas 151832728 Jan 16 10:39 /home/atlas/RunAtlas/HITS.48215263._012941.pool.root.1
2026-01-16 18:40:26 (9644): Guest Log: Successfully finished the ATLAS job!
2026-01-16 18:40:26 (9644): Guest Log: Copying the results back to the shared directory!
2026-01-16 18:40:26 (9644): Guest Log:  *** Contents of shared directory: ***
2026-01-16 18:40:26 (9644): Guest Log: total 730304
2026-01-16 18:40:26 (9644): Guest Log: -rwxrwxrwx. 1 root root 594451019 Jan 16 09:17 ATLAS.root_0
2026-01-16 18:40:26 (9644): Guest Log: -rwxrwxrwx. 1 root root 151832728 Jan 16 10:40 HITS.pool.root.1
2026-01-16 18:40:26 (9644): Guest Log: -rwxrwxrwx. 1 root root      9180 Jan 16 09:17 init_data.xml
2026-01-16 18:40:26 (9644): Guest Log: -rwxrwxrwx. 1 root root    592400 Jan 15 01:13 input.tar.gz
2026-01-16 18:40:26 (9644): Guest Log: -rwxrwxrwx. 1 root root    921600 Jan 16 10:40 result.tar.gz
2026-01-16 18:40:26 (9644): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan 15 01:13 start_atlas.sh
2026-01-16 18:40:26 (9644): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-16 18:40:26 (9644): VM Completion File Detected.
2026-01-16 18:40:26 (9644): Powering off VM.
2026-01-16 18:40:27 (9644): Successfully stopped VM.
2026-01-16 18:40:27 (9644): Deregistering VM. (boinc_166ec8f3282b5ee0, slot#2)
2026-01-16 18:40:27 (9644): Removing network bandwidth throttle group from VM.
2026-01-16 18:40:27 (9644): Removing VM from VirtualBox.
2026-01-16 18:40:32 (9644): called boinc_finish(0)

</stderr_txt>
]]>

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