Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:59:13 (3126162): wrapper (7.7.26015): starting
05:59:13 (3126162): wrapper: running run_atlas (--nthreads 9)
[2026-01-14 05:59:13] Arguments: --nthreads 9
[2026-01-14 05:59:13] Threads: 9
[2026-01-14 05:59:13] Checking for CVMFS
[2026-01-14 05:59:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 05:59:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 05:59:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 05:59:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 05:59:36] 2.13.3.0 12161 100521 358668 155128 2 499 27406905 40960001 14219 16776704 0 269250231 99.544 320745136 37786 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 05:59:36] CVMFS is ok
[2026-01-14 05:59:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 05:59:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 05:59:36] Further information can be found at the LHC@home message board.
[2026-01-14 05:59:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 05:59:36] Checking for apptainer binary...
[2026-01-14 05:59:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 05:59:36] Running /usr/bin/apptainer --version
[2026-01-14 05:59:36] apptainer version 1.4.5-2.el9
[2026-01-14 05:59:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 05:59:36] c6-5-7-1.aglt2.org
[2026-01-14 05:59:36] apptainer works
[2026-01-14 05:59:36] Set ATHENA_PROC_NUMBER=9
[2026-01-14 05:59:36] Set ATHENA_CORE_NUMBER=9
[2026-01-14 05:59:36] Starting ATLAS job with PandaID=6969264650
[2026-01-14 05:59:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 07:29:33]  *** The last 200 lines of the pilot log: ***
[2026-01-14 07:29:33] 2026-01-14 12:28:21,916 | INFO     | transferring file log.48215263._004397.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969264650/log.48215263._004397.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 07:29:33] 2026-01-14 12:28:21,917 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969264650/log.48215263._004397.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._004397.job
[2026-01-14 07:29:33] 2026-01-14 12:28:21,929 | INFO     | adding to output.list: log.48215263._004397.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/0e/log.48215263._004397.job.log.tg
[2026-01-14 07:29:33] 2026-01-14 12:28:21,930 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 07:29:33] 2026-01-14 12:28:21,930 | INFO     | summary of transferred files:
[2026-01-14 07:29:33] 2026-01-14 12:28:21,931 | INFO     |  -- lfn=log.48215263._004397.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 07:29:33] 2026-01-14 12:28:21,931 | INFO     | stage-out finished correctly
[2026-01-14 07:29:33] 2026-01-14 12:28:22,121 | INFO     | time since job start (5285s) is within the limit (349056.0s)
[2026-01-14 07:29:33] 2026-01-14 12:28:22,550 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 07:29:33] 2026-01-14 12:28:24,115 | WARNING  | process 3141700 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 07:29:33] 2026-01-14 12:28:24,116 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969264650/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 07:29:33] 2026-01-14 12:28:24,117 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969264650/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 07:29:33] 2026-01-14 12:28:24,117 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-14 07:29:33] 2026-01-14 12:28:24,117 | WARNING  | maxPSS not found in memory monitor output
[2026-01-14 07:29:33] 2026-01-14 12:28:24,127 | INFO     | time since job start (5287s) is within the limit (349056.0s)
[2026-01-14 07:29:33] 2026-01-14 12:28:24,680 | INFO     | number of running child processes to parent process 3141700: 1
[2026-01-14 07:29:33] 2026-01-14 12:28:24,681 | INFO     | maximum number of monitored processes: 6
[2026-01-14 07:29:33] 2026-01-14 12:28:25,175 | INFO     | job 6969264650 has state=finished
[2026-01-14 07:29:33] 2026-01-14 12:28:25,176 | INFO     | preparing for final server update for job 6969264650 in state='finished'
[2026-01-14 07:29:33] 2026-01-14 12:28:25,176 | INFO     | this job has now completed (state=finished)
[2026-01-14 07:29:33] 2026-01-14 12:28:25,176 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 07:29:33] 2026-01-14 12:28:25,176 | INFO     | log transfer has been attempted: DONE
[2026-01-14 07:29:33] 2026-01-14 12:28:25,177 | INFO     | job 6969264650 has finished - writing final server update
[2026-01-14 07:29:33] 2026-01-14 12:28:25,177 | INFO     | total number of processed events: 400 (read)
[2026-01-14 07:29:33] 2026-01-14 12:28:25,177 | INFO     | executing command: lscpu
[2026-01-14 07:29:33] 2026-01-14 12:28:25,232 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 07:29:33] 2026-01-14 12:28:26,133 | INFO     | time since job start (5289s) is within the limit (349056.0s)
[2026-01-14 07:29:33] 2026-01-14 12:28:27,191 | INFO     | monitor loop #362: job 0:6969264650 is in state 'finished'
[2026-01-14 07:29:33] 2026-01-14 12:28:27,191 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 07:29:33] 2026-01-14 12:28:28,141 | INFO     | time since job start (5291s) is within the limit (349056.0s)
[2026-01-14 07:29:33] 2026-01-14 12:28:29,695 | INFO     | monitor loop #363: job 0:6969264650 is in state 'finished'
[2026-01-14 07:29:33] 2026-01-14 12:28:29,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 07:29:33] 2026-01-14 12:28:30,146 | INFO     | time since job start (5293s) is within the limit (349056.0s)
[2026-01-14 07:29:33] 2026-01-14 12:28:32,179 | INFO     | time since job start (5295s) is within the limit (349056.0s)
[2026-01-14 07:29:33] 2026-01-14 12:28:32,204 | INFO     | monitor loop #364: job 0:6969264650 is in state 'finished'
[2026-01-14 07:29:33] 2026-01-14 12:28:32,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 07:29:33] 2026-01-14 12:28:32,913 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 07:29:33] 2026-01-14 12:28:32,925 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3050.613232142858
[2026-01-14 07:29:33] 2026-01-14 12:28:32,937 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969264650/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 07:29:33] 2026-01-14 12:28:32,938 | INFO     | extracted standard info from prmon json
[2026-01-14 07:29:33] 2026-01-14 12:28:32,938 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 07:29:33] 2026-01-14 12:28:32,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 07:29:33] 2026-01-14 12:28:32,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 07:29:33] 2026-01-14 12:28:32,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 07:29:33] 2026-01-14 12:28:32,941 | INFO     | fitting pss+swap vs Time
[2026-01-14 07:29:33] 2026-01-14 12:28:32,941 | INFO     | sum of square deviations: 152850394.17721546
[2026-01-14 07:29:33] 2026-01-14 12:28:32,942 | INFO     | sum of deviations: 867266058.2911396
[2026-01-14 07:29:33] 2026-01-14 12:28:32,942 | INFO     | mean x: 1768391174.1518986
[2026-01-14 07:29:33] 2026-01-14 12:28:32,942 | INFO     | mean y: 2611765.3924050634
[2026-01-14 07:29:33] 2026-01-14 12:28:32,942 | INFO     | intersect: -10031157865.22705
[2026-01-14 07:29:33] 2026-01-14 12:28:32,942 | INFO     | chi2: 0.03727976874687848
[2026-01-14 07:29:33] 2026-01-14 12:28:32,942 | INFO     | current memory leak: 5.67 B/s (using 79 data points, chi2=0.04)
[2026-01-14 07:29:33] 2026-01-14 12:28:32,943 | INFO     | could have reported an average CPU frequency of 3050 MHz (6 samples)
[2026-01-14 07:29:33] 2026-01-14 12:28:32,943 | INFO     | ..............................
[2026-01-14 07:29:33] 2026-01-14 12:28:32,943 | INFO     | . Timing measurements:
[2026-01-14 07:29:33] 2026-01-14 12:28:32,943 | INFO     | . get job = 0 s
[2026-01-14 07:29:33] 2026-01-14 12:28:32,943 | INFO     | . initial setup = 3 s
[2026-01-14 07:29:33] 2026-01-14 12:28:32,943 | INFO     | . payload setup = 23 s
[2026-01-14 07:29:33] 2026-01-14 12:28:32,943 | INFO     | . stage-in = 0 s
[2026-01-14 07:29:33] 2026-01-14 12:28:32,943 | INFO     | . payload execution = 5219 s
[2026-01-14 07:29:33] 2026-01-14 12:28:32,943 | INFO     | . stage-out = 0 s
[2026-01-14 07:29:33] 2026-01-14 12:28:32,944 | INFO     | . log creation = 0 s
[2026-01-14 07:29:33] 2026-01-14 12:28:32,944 | INFO     | ..............................
[2026-01-14 07:29:33] 2026-01-14 12:28:33,072 | INFO     | 
[2026-01-14 07:29:33] 2026-01-14 12:28:33,072 | INFO     | job summary report
[2026-01-14 07:29:33] 2026-01-14 12:28:33,072 | INFO     | --------------------------------------------------
[2026-01-14 07:29:33] 2026-01-14 12:28:33,072 | INFO     | PanDA job id: 6969264650
[2026-01-14 07:29:33] 2026-01-14 12:28:33,072 | INFO     | task id: 48215263
[2026-01-14 07:29:33] 2026-01-14 12:28:33,072 | INFO     | errors: (none)
[2026-01-14 07:29:33] 2026-01-14 12:28:33,072 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 07:29:33] 2026-01-14 12:28:33,072 | INFO     | pilot state: finished 
[2026-01-14 07:29:33] 2026-01-14 12:28:33,072 | INFO     | transexitcode: 0
[2026-01-14 07:29:33] 2026-01-14 12:28:33,072 | INFO     | exeerrorcode: 0
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | exeerrordiag: 
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | exitcode: 0
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | exitmsg: OK
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | cpuconsumptiontime: 24718 s
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | nevents: 400
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | neventsw: 0
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | pid: 3141700
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | pgrp: 3141700
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | corecount: 9
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | event service: False
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | sizes: {0: 2283718, 1: 2283973, 12: 2283973, 14: 2284263, 23: 2284291, 5246: 2310891, 5248: 2319889, 5249: 2319945, 5259: 2320139}
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | --------------------------------------------------
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | 
[2026-01-14 07:29:33] 2026-01-14 12:28:33,073 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 07:29:33] 2026-01-14 12:28:33,101 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,101 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,101 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,101 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,102 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 07:29:33] 2026-01-14 12:28:33,103 | INFO     | job 6969264650 has completed (purged errors)
[2026-01-14 07:29:33] 2026-01-14 12:28:33,103 | INFO     | overall cleanup function is called
[2026-01-14 07:29:33] 2026-01-14 12:28:33,577 | INFO     | PID=3134351 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-14 07:29:33] 2026-01-14 12:28:33,577 | INFO     | .. there are 17 such processes running
[2026-01-14 07:29:33] 2026-01-14 12:28:34,113 | INFO     | --- collectZombieJob: --- 10, [3141700]
[2026-01-14 07:29:33] 2026-01-14 12:28:34,113 | INFO     | zombie collector waiting for pid 3141700
[2026-01-14 07:29:33] 2026-01-14 12:28:34,113 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 07:29:33] 2026-01-14 12:28:34,113 | INFO     | collected zombie processes
[2026-01-14 07:29:33] 2026-01-14 12:28:34,114 | INFO     | will attempt to kill all subprocesses of pid=3141700
[2026-01-14 07:29:33] 2026-01-14 12:28:34,422 | INFO     | process IDs to be killed: [3141700] (in reverse order)
[2026-01-14 07:29:33] 2026-01-14 12:28:34,533 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 07:29:33] 2026-01-14 12:28:34,534 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 07:29:33] 2026-01-14 12:28:34,549 | INFO     | did not find any defunct processes belonging to 3141700
[2026-01-14 07:29:33] 2026-01-14 12:28:34,562 | INFO     | did not find any defunct processes belonging to 3141700
[2026-01-14 07:29:33] 2026-01-14 12:28:34,562 | INFO     | ready for new job
[2026-01-14 07:29:33] 2026-01-14 12:28:34,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 07:29:33] 2026-01-14 12:28:34,565 | INFO     | ***************************************
[2026-01-14 07:29:33] 2026-01-14 12:28:34,565 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 07:29:33] 2026-01-14 12:28:34,565 | INFO     | ***************************************
[2026-01-14 07:29:33] 2026-01-14 12:28:34,566 | INFO     | 
[2026-01-14 07:29:33] 2026-01-14 12:28:34,569 | INFO     | architecture information:
[2026-01-14 07:29:33] 2026-01-14 12:28:34,569 | INFO     | executing command: cat /etc/os-release
[2026-01-14 07:29:33] 2026-01-14 12:28:34,591 | INFO     | cat /etc/os-release:
[2026-01-14 07:29:33] NAME="CentOS Linux"
[2026-01-14 07:29:33] VERSION="7 (Core)"
[2026-01-14 07:29:33] ID="centos"
[2026-01-14 07:29:33] ID_LIKE="rhel fedora"
[2026-01-14 07:29:33] VERSION_ID="7"
[2026-01-14 07:29:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 07:29:33] ANSI_COLOR="0;31"
[2026-01-14 07:29:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 07:29:33] HOME_URL="https://www.centos.org/"
[2026-01-14 07:29:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 07:29:33] 
[2026-01-14 07:29:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 07:29:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 07:29:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 07:29:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 07:29:33] 
[2026-01-14 07:29:33] 2026-01-14 12:28:34,592 | INFO     | ***************************************
[2026-01-14 07:29:33] 2026-01-14 12:28:35,095 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 07:29:33] 2026-01-14 12:28:35,117 | INFO     | sufficient remaining disk space (72336015360 B)
[2026-01-14 07:29:33] 2026-01-14 12:28:35,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 07:29:33] 2026-01-14 12:28:35,118 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 07:29:33] 2026-01-14 12:28:35,118 | INFO     | update_server=False
[2026-01-14 07:29:33] 2026-01-14 12:28:35,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 07:29:33] 2026-01-14 12:28:35,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 07:29:33] 2026-01-14 12:28:35,246 | INFO     | all data control threads have been joined
[2026-01-14 07:29:33] 2026-01-14 12:28:35,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 07:29:33] 2026-01-14 12:28:35,725 | INFO     | aborting loop
[2026-01-14 07:29:33] 2026-01-14 12:28:35,958 | INFO     | all job control threads have been joined
[2026-01-14 07:29:33] 2026-01-14 12:28:36,123 | INFO     | [job] retrieve thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:36,191 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:36,251 | INFO     | [data] control thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:36,316 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:36,323 | INFO     | [data] copytool_in thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:36,485 | INFO     | all payload control threads have been joined
[2026-01-14 07:29:33] 2026-01-14 12:28:36,731 | INFO     | [job] job monitor thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:36,963 | INFO     | [job] control thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:37,126 | INFO     | [data] copytool_out thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:37,188 | INFO     | [job] validate thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:37,387 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:37,456 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:37,490 | INFO     | [payload] control thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:37,550 | INFO     | [payload] failed_post thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:37,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 07:29:33] 2026-01-14 12:28:37,721 | INFO     | [payload] validate_post thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:38,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 07:29:33] 2026-01-14 12:28:39,088 | INFO     | [job] queue monitor thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:28:41,663 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 07:29:33] 2026-01-14 12:29:06,056 | INFO     | PID=3134351 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 07:29:33] 2026-01-14 12:29:06,056 | INFO     | .. there are 17 such processes running
[2026-01-14 07:29:33] 2026-01-14 12:29:06,057 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 07:29:33] 2026-01-14 12:29:06,057 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 07:29:33] 2026-01-14 12:29:06,057 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 07:29:33] 2026-01-14 12:29:26,175 | INFO     | [monitor] cgroup control has ended
[2026-01-14 07:29:33] 2026-01-14 12:29:27,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952551270208)>', '<ExcThread(monitor, started 139951794525952)>']
[2026-01-14 07:29:33] 2026-01-14 12:29:28,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 07:29:33] 2026-01-14 12:29:28,192 | INFO     | [monitor] control thread has ended
[2026-01-14 07:29:33] 2026-01-14 12:29:32,909 | INFO     | all workflow threads have been joined
[2026-01-14 07:29:33] 2026-01-14 12:29:32,909 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 07:29:33] 2026-01-14 12:29:32,910 | INFO     | traces error code: 0
[2026-01-14 07:29:33] 2026-01-14 12:29:32,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 07:29:33] 2026-01-14 12:29:33,078 [wrapper] ==== pilot stdout END ====
[2026-01-14 07:29:33] 2026-01-14 12:29:33,081 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 07:29:33] 2026-01-14 12:29:33,084 [wrapper] pilotpid: 3134351
[2026-01-14 07:29:33] 2026-01-14 12:29:33,086 [wrapper] Pilot exit status: 0
[2026-01-14 07:29:33] 2026-01-14 12:29:33,097 [wrapper] pandaids: 6969264650
[2026-01-14 07:29:33] 2026-01-14 12:29:33,167 [wrapper] cleanup supervisor_pilot 3423876 3134352
[2026-01-14 07:29:33] 2026-01-14 12:29:33,169 [wrapper] Test setup, not cleaning
[2026-01-14 07:29:33] 2026-01-14 12:29:33,172 [wrapper] apfmon messages muted
[2026-01-14 07:29:33] 2026-01-14 12:29:33,175 [wrapper] ==== wrapper stdout END ====
[2026-01-14 07:29:33] 2026-01-14 12:29:33,178 [wrapper] ==== wrapper stderr END ====
[2026-01-14 07:29:33]  *** Error codes and diagnostics ***
[2026-01-14 07:29:33]     "exeErrorCode": 0,
[2026-01-14 07:29:33]     "exeErrorDiag": "",
[2026-01-14 07:29:33]     "pilotErrorCode": 0,
[2026-01-14 07:29:33]     "pilotErrorDiag": "",
[2026-01-14 07:29:33]  *** Listing of results directory ***
[2026-01-14 07:29:33] total 732880
[2026-01-14 07:29:33] -rwx------. 1 boincer umatlas     36322 Jan 13 17:01 runpilot2-wrapper.sh
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 17:12 queuedata.json
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 17:12 pilot3.tar.gz
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas       100 Jan 14 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 07:29:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 05:59 run_atlas
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas       105 Jan 14 05:59 job.xml
[2026-01-14 07:29:33] -rw-r--r--. 2 boincer umatlas 593187914 Jan 14 05:59 EVNT.32794306._000176.pool.root.1
[2026-01-14 07:29:33] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 05:59 start_atlas.sh
[2026-01-14 07:29:33] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 05:59 shared
[2026-01-14 07:29:33] -rw-r--r--. 2 boincer umatlas    592392 Jan 14 05:59 input.tar.gz
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas         0 Jan 14 05:59 boinc_lockfile
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas      2505 Jan 14 05:59 pandaJob.out
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas        57 Jan 14 05:59 setup.sh.local
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas    997226 Jan 14 06:00 agis_schedconf.cvmfs.json
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas   1516246 Jan 14 06:00 agis_ddmendpoints.agis.ALL.json
[2026-01-14 07:29:33] drwx------. 5 boincer umatlas      4096 Jan 14 06:00 pilot3
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas 151156577 Jan 14 07:27 HITS.48215263._004397.pool.root.1
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas       531 Jan 14 07:28 boinc_task_state.xml
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas      1039 Jan 14 07:28 memory_monitor_summary.json
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas    357683 Jan 14 07:28 log.48215263._004397.job.log.tgz.1
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas      7813 Jan 14 07:28 heartbeat.json
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas      6841 Jan 14 07:28 init_data.xml
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas        95 Jan 14 07:29 pilot_heartbeat.json
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 07:29 boinc_mmap_file
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas      4824 Jan 14 07:29 pilotlog.txt
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas    740703 Jan 14 07:29 log.48215263._004397.job.log.1
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas        27 Jan 14 07:29 wrapper_checkpoint.txt
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas       357 Jan 14 07:29 output.list
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas       620 Jan 14 07:29 runtime_log
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas   1116160 Jan 14 07:29 result.tar.gz
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas      9342 Jan 14 07:29 runtime_log.err
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas       652 Jan 14 07:29 EkUKDmOd1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmutiKDmjRLHZn.diag
[2026-01-14 07:29:33] -rw-r--r--. 1 boincer umatlas     22710 Jan 14 07:29 stderr.txt
[2026-01-14 07:29:33] HITS file was successfully produced:
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas 151156577 Jan 14 07:27 shared/HITS.pool.root.1
[2026-01-14 07:29:33]  *** Contents of shared directory: ***
[2026-01-14 07:29:33] total 728600
[2026-01-14 07:29:33] -rw-r--r--. 2 boincer umatlas 593187914 Jan 14 05:59 ATLAS.root_0
[2026-01-14 07:29:33] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 05:59 start_atlas.sh
[2026-01-14 07:29:33] -rw-r--r--. 2 boincer umatlas    592392 Jan 14 05:59 input.tar.gz
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas 151156577 Jan 14 07:27 HITS.pool.root.1
[2026-01-14 07:29:33] -rw-------. 1 boincer umatlas   1116160 Jan 14 07:29 result.tar.gz
07:29:35 (3126162): run_atlas exited; CPU time 24810.295598
07:29:35 (3126162): called boinc_finish(0)

</stderr_txt>
]]>

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