Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:24:33 (3203841): wrapper (7.7.26015): starting
12:24:33 (3203841): wrapper: running run_atlas (--nthreads 3)
[2026-01-14 12:24:33] Arguments: --nthreads 3
[2026-01-14 12:24:33] Threads: 3
[2026-01-14 12:24:33] Checking for CVMFS
[2026-01-14 12:24:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 12:24:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 12:24:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 12:24:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 12:24:33] 2.9.2.0 2866369 883 75308 155130 2 57 23694794 36864001 0 130560 0 914793 99.990 41265 2112 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 12:24:33] CVMFS is ok
[2026-01-14 12:24:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 12:24:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 12:24:33] Further information can be found at the LHC@home message board.
[2026-01-14 12:24:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 12:24:33] Checking for apptainer binary...
[2026-01-14 12:24:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 12:24:33] Running /usr/bin/apptainer --version
[2026-01-14 12:24:33] apptainer version 1.4.1-1.1
[2026-01-14 12:24:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 12:24:33] magicA161a
[2026-01-14 12:24:33] apptainer works
[2026-01-14 12:24:33] Set ATHENA_PROC_NUMBER=3
[2026-01-14 12:24:33] Set ATHENA_CORE_NUMBER=3
[2026-01-14 12:24:33] Starting ATLAS job with PandaID=6969345723
[2026-01-14 12:24:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 13:17:48]  *** The last 200 lines of the pilot log: ***
[2026-01-14 13:17:48] 2026-01-14 12:16:48,442 | INFO     | all data control threads have been joined
[2026-01-14 13:17:48] 2026-01-14 12:16:48,844 | INFO     | all job control threads have been joined
[2026-01-14 13:17:48] 2026-01-14 12:16:48,926 | INFO     | all payload control threads have been joined
[2026-01-14 13:17:48] 2026-01-14 12:16:48,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 13:17:48] 2026-01-14 12:16:48,930 | INFO     | aborting loop
[2026-01-14 13:17:48] 2026-01-14 12:16:49,164 | INFO     | [job] queue monitor thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:49,164 | INFO     | [job] retrieve thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:49,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 13:17:48] 2026-01-14 12:16:49,448 | INFO     | [data] control thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:49,484 | INFO     | [payload] validate_post thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:49,666 | INFO     | [data] copytool_in thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:49,849 | INFO     | [job] control thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:49,932 | INFO     | [payload] control thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:49,935 | INFO     | [job] job monitor thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:50,163 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:50,197 | INFO     | [job] validate thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:50,286 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:50,309 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:50,398 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:50,559 | INFO     | [payload] failed_post thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:51,353 | INFO     | [data] copytool_out thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:16:52,166 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 13:17:48] 2026-01-14 12:17:17,868 | INFO     | PID=3207567 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 13:17:48] 2026-01-14 12:17:17,868 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 13:17:48] 2026-01-14 12:17:17,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 13:17:48] 2026-01-14 12:17:17,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 13:17:48] 2026-01-14 12:17:42,484 | INFO     | [monitor] cgroup control has ended
[2026-01-14 13:17:48] 2026-01-14 12:17:43,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898533345088)>', '<ExcThread(monitor, started 139897746745088)>']
[2026-01-14 13:17:48] 2026-01-14 12:17:44,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 13:17:48] 2026-01-14 12:17:44,007 | INFO     | [monitor] control thread has ended
[2026-01-14 13:17:48] 2026-01-14 12:17:48,515 | INFO     | all workflow threads have been joined
[2026-01-14 13:17:48] 2026-01-14 12:17:48,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 13:17:48] 2026-01-14 12:17:48,516 | INFO     | traces error code: 0
[2026-01-14 13:17:48] 2026-01-14 12:17:48,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 13:17:48] 2026-01-14 12:17:48,566 [wrapper] ==== pilot stdout END ====
[2026-01-14 13:17:48] 2026-01-14 12:17:48,568 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 13:17:48] 2026-01-14 12:17:48,570 [wrapper] pilotpid: 3207567
[2026-01-14 13:17:48] 2026-01-14 12:17:48,572 [wrapper] Pilot exit status: 0
[2026-01-14 13:17:48] 2026-01-14 12:17:48,579 [wrapper] pandaids: 6969345723
[2026-01-14 13:17:48] 2026-01-14 12:17:48,596 [wrapper] cleanup supervisor_pilot 3223170 3207568
[2026-01-14 13:17:48] 2026-01-14 12:17:48,598 [wrapper] Test setup, not cleaning
[2026-01-14 13:17:48] 2026-01-14 12:17:48,600 [wrapper] apfmon messages muted
[2026-01-14 13:17:48] 2026-01-14 12:17:48,603 [wrapper] ==== wrapper stdout END ====
[2026-01-14 13:17:48] 2026-01-14 12:17:48,605 [wrapper] ==== wrapper stderr END ====
[2026-01-14 13:17:48]  *** Error codes and diagnostics ***
[2026-01-14 13:17:48]     "exeErrorCode": 0,
[2026-01-14 13:17:48]     "exeErrorDiag": "",
[2026-01-14 13:17:48]     "pilotErrorCode": 0,
[2026-01-14 13:17:48]     "pilotErrorDiag": "",
[2026-01-14 13:17:48]  *** Listing of results directory ***
[2026-01-14 13:17:48] total 730792
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc    579449 Jan 14 06:14 pilot3.tar.gz
[2026-01-14 13:17:48] -rwx------ 1 boinc boinc     36322 Jan 14 06:17 runpilot2-wrapper.sh
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc      5112 Jan 14 06:17 queuedata.json
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc       100 Jan 14 12:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 13:17:48] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 12:24 run_atlas
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc       105 Jan 14 12:24 job.xml
[2026-01-14 13:17:48] -rw-r--r-- 2 boinc boinc 595352716 Jan 14 12:24 EVNT.32794306._000605.pool.root.1
[2026-01-14 13:17:48] -rw-r--r-- 2 boinc boinc    592394 Jan 14 12:24 input.tar.gz
[2026-01-14 13:17:48] -rw-r--r-- 2 boinc boinc     15847 Jan 14 12:24 start_atlas.sh
[2026-01-14 13:17:48] drwxrwx--x 2 boinc boinc      4096 Jan 14 12:24 shared
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc         0 Jan 14 12:24 boinc_setup_complete
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc      6448 Jan 14 12:24 init_data.xml
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc         0 Jan 14 12:24 boinc_lockfile
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc      2507 Jan 14 12:24 pandaJob.out
[2026-01-14 13:17:48] -rw------- 1 boinc boinc    997566 Jan 14 12:24 agis_schedconf.cvmfs.json
[2026-01-14 13:17:48] -rw------- 1 boinc boinc   1516246 Jan 14 12:24 agis_ddmendpoints.agis.ALL.json
[2026-01-14 13:17:48] drwx------ 5 boinc boinc      4096 Jan 14 12:24 pilot3
[2026-01-14 13:17:48] -rw------- 1 boinc boinc 147656779 Jan 14 13:16 HITS.48215263._015111.pool.root.1
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc       529 Jan 14 13:16 boinc_task_state.xml
[2026-01-14 13:17:48] -rw------- 1 boinc boinc      1017 Jan 14 13:16 memory_monitor_summary.json
[2026-01-14 13:17:48] -rw------- 1 boinc boinc    225918 Jan 14 13:16 log.48215263._015111.job.log.tgz.1
[2026-01-14 13:17:48] -rw------- 1 boinc boinc      7748 Jan 14 13:16 heartbeat.json
[2026-01-14 13:17:48] -rw------- 1 boinc boinc        95 Jan 14 13:17 pilot_heartbeat.json
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc      8192 Jan 14 13:17 boinc_mmap_file
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc        26 Jan 14 13:17 wrapper_checkpoint.txt
[2026-01-14 13:17:48] -rw------- 1 boinc boinc      4752 Jan 14 13:17 pilotlog.txt
[2026-01-14 13:17:48] -rw------- 1 boinc boinc    478864 Jan 14 13:17 log.48215263._015111.job.log.1
[2026-01-14 13:17:48] -rw------- 1 boinc boinc       357 Jan 14 13:17 output.list
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc       620 Jan 14 13:17 runtime_log
[2026-01-14 13:17:48] -rw------- 1 boinc boinc    727040 Jan 14 13:17 result.tar.gz
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc      8917 Jan 14 13:17 runtime_log.err
[2026-01-14 13:17:48] -rw------- 1 boinc boinc       660 Jan 14 13:17 WFHLDmKR8z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlBkKDmcm9YNm.diag
[2026-01-14 13:17:48] -rw-r--r-- 1 boinc boinc      6934 Jan 14 13:17 stderr.txt
[2026-01-14 13:17:48] HITS file was successfully produced:
[2026-01-14 13:17:48] -rw------- 1 boinc boinc 147656779 Jan 14 13:16 shared/HITS.pool.root.1
[2026-01-14 13:17:48]  *** Contents of shared directory: ***
[2026-01-14 13:17:48] total 726916
[2026-01-14 13:17:48] -rw-r--r-- 2 boinc boinc 595352716 Jan 14 12:24 ATLAS.root_0
[2026-01-14 13:17:48] -rw-r--r-- 2 boinc boinc    592394 Jan 14 12:24 input.tar.gz
[2026-01-14 13:17:48] -rw-r--r-- 2 boinc boinc     15847 Jan 14 12:24 start_atlas.sh
[2026-01-14 13:17:48] -rw------- 1 boinc boinc 147656779 Jan 14 13:16 HITS.pool.root.1
[2026-01-14 13:17:48] -rw------- 1 boinc boinc    727040 Jan 14 13:17 result.tar.gz
13:17:50 (3203841): run_atlas exited; CPU time 8770.843033
13:17:50 (3203841): called boinc_finish(0)

</stderr_txt>
]]>

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