Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:49:51 (1372): wrapper (7.7.26015): starting
13:49:51 (1372): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 13:49:51] Arguments: --nthreads 8
[2026-01-14 13:49:51] Threads: 8
[2026-01-14 13:49:51] Checking for CVMFS
[2026-01-14 13:49:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 13:49:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 13:49:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 13:49:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 13:49:55] 2.11.2.0 27707 42636 101680 155132 1 61 16470865 25165825 96 130560 0 17055301 99.860 10324940 2857 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 13:49:55] CVMFS is ok
[2026-01-14 13:49:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 13:49:55] Checking for apptainer binary...
[2026-01-14 13:49:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 13:49:55] Running /usr/bin/apptainer --version
[2026-01-14 13:49:55] apptainer version 1.3.2-1.el7
[2026-01-14 13:49:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 13:50:10] cg-vwn470.simple-grid.lan
[2026-01-14 13:50:10] apptainer works
[2026-01-14 13:50:10] Set ATHENA_PROC_NUMBER=8
[2026-01-14 13:50:10] Set ATHENA_CORE_NUMBER=8
[2026-01-14 13:50:10] Starting ATLAS job with PandaID=6969346176
[2026-01-14 13:50:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 16:41:06]  *** The last 200 lines of the pilot log: ***
[2026-01-14 16:41:06] 2026-01-14 15:40:08,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,346 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 16:41:06] 2026-01-14 15:40:08,347 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-14 16:41:06] 2026-01-14 15:40:08,349 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6969346176/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,350 | INFO     | extracted standard info from prmon json
[2026-01-14 16:41:06] 2026-01-14 15:40:08,350 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 16:41:06] 2026-01-14 15:40:08,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 16:41:06] 2026-01-14 15:40:08,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 16:41:06] 2026-01-14 15:40:08,351 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 16:41:06] 2026-01-14 15:40:08,355 | INFO     | fitting pss+swap vs Time
[2026-01-14 16:41:06] 2026-01-14 15:40:08,355 | INFO     | sum of square deviations: 1110539892.0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,356 | INFO     | sum of deviations: 81910531356.00002
[2026-01-14 16:41:06] 2026-01-14 15:40:08,357 | INFO     | mean x: 1768400440.0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,357 | INFO     | mean y: 2377392.5098039214
[2026-01-14 16:41:06] 2026-01-14 15:40:08,357 | INFO     | intersect: -130430235370.0259
[2026-01-14 16:41:06] 2026-01-14 15:40:08,357 | INFO     | chi2: 8.153511856869201
[2026-01-14 16:41:06] 2026-01-14 15:40:08,358 | INFO     | sum of square deviations: 1005179777.0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,359 | INFO     | sum of deviations: 88960770537.49998
[2026-01-14 16:41:06] 2026-01-14 15:40:08,359 | INFO     | mean x: 1768400287.5
[2026-01-14 16:41:06] 2026-01-14 15:40:08,359 | INFO     | mean y: 2387206.0472972975
[2026-01-14 16:41:06] 2026-01-14 15:40:08,359 | INFO     | intersect: -156505190636.65387
[2026-01-14 16:41:06] 2026-01-14 15:40:08,360 | INFO     | chi2: 7.467492259612938
[2026-01-14 16:41:06] 2026-01-14 15:40:08,360 | INFO     | current chi2=7.467492259612938 (change=8.413792845328393 %)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,360 | INFO     | right removable region: 147
[2026-01-14 16:41:06] 2026-01-14 15:40:08,360 | INFO     | sum of square deviations: 1005179777.0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,367 | INFO     | sum of deviations: 29938787525.499996
[2026-01-14 16:41:06] 2026-01-14 15:40:08,368 | INFO     | mean x: 1768400592.5
[2026-01-14 16:41:06] 2026-01-14 15:40:08,368 | INFO     | mean y: 2452543.3445945946
[2026-01-14 16:41:06] 2026-01-14 15:40:08,368 | INFO     | intersect: -52668493301.62518
[2026-01-14 16:41:06] 2026-01-14 15:40:08,368 | INFO     | chi2: 2.9847075084802794
[2026-01-14 16:41:06] 2026-01-14 15:40:08,368 | INFO     | current chi2=2.9847075084802794 (change=63.39359577964295 %)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,369 | INFO     | sum of square deviations: 906703512.0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,370 | INFO     | sum of deviations: -4352381903.0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,370 | INFO     | mean x: 1768400745.0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,370 | INFO     | mean y: 2505393.4825174827
[2026-01-14 16:41:06] 2026-01-14 15:40:08,370 | INFO     | intersect: 8491228882.390452
[2026-01-14 16:41:06] 2026-01-14 15:40:08,371 | INFO     | chi2: 0.8454129728926195
[2026-01-14 16:41:06] 2026-01-14 15:40:08,371 | INFO     | current chi2=0.8454129728926195 (change=71.67518188999775 %)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,371 | INFO     | sum of square deviations: 814878534.5
[2026-01-14 16:41:06] 2026-01-14 15:40:08,372 | INFO     | sum of deviations: -6729905398.0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,372 | INFO     | mean x: 1768400897.5
[2026-01-14 16:41:06] 2026-01-14 15:40:08,372 | INFO     | mean y: 2509258.6811594204
[2026-01-14 16:41:06] 2026-01-14 15:40:08,372 | INFO     | intersect: 14607349418.344604
[2026-01-14 16:41:06] 2026-01-14 15:40:08,373 | INFO     | chi2: 0.8056541460390086
[2026-01-14 16:41:06] 2026-01-14 15:40:08,373 | INFO     | current chi2=0.8056541460390086 (change=4.702888189374976 %)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,373 | INFO     | left removable region: 30
[2026-01-14 16:41:06] 2026-01-14 15:40:08,373 | INFO     | sum of square deviations: 496597218.0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,374 | INFO     | sum of deviations: 748794397.9999998
[2026-01-14 16:41:06] 2026-01-14 15:40:08,374 | INFO     | mean x: 1768401172.0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,374 | INFO     | mean y: 2528548.94017094
[2026-01-14 16:41:06] 2026-01-14 15:40:08,375 | INFO     | intersect: -2663956165.4591637
[2026-01-14 16:41:06] 2026-01-14 15:40:08,375 | INFO     | chi2: 0.00021622398353038269
[2026-01-14 16:41:06] 2026-01-14 15:40:08,375 | INFO     | current memory leak: 1.51 B/s (using 117 data points, chi2=0.00)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,376 | INFO     | could have reported an average CPU frequency of 2249 MHz (9 samples)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,376 | INFO     | ..............................
[2026-01-14 16:41:06] 2026-01-14 15:40:08,376 | INFO     | . Timing measurements:
[2026-01-14 16:41:06] 2026-01-14 15:40:08,376 | INFO     | . get job = 0 s
[2026-01-14 16:41:06] 2026-01-14 15:40:08,376 | INFO     | . initial setup = 11 s
[2026-01-14 16:41:06] 2026-01-14 15:40:08,376 | INFO     | . payload setup = 141 s
[2026-01-14 16:41:06] 2026-01-14 15:40:08,376 | INFO     | . stage-in = 0 s
[2026-01-14 16:41:06] 2026-01-14 15:40:08,377 | INFO     | . payload execution = 9457 s
[2026-01-14 16:41:06] 2026-01-14 15:40:08,377 | INFO     | . stage-out = 3 s
[2026-01-14 16:41:06] 2026-01-14 15:40:08,377 | INFO     | . log creation = 1 s
[2026-01-14 16:41:06] 2026-01-14 15:40:08,377 | INFO     | ..............................
[2026-01-14 16:41:06] 2026-01-14 15:40:08,508 | INFO     | 
[2026-01-14 16:41:06] 2026-01-14 15:40:08,508 | INFO     | job summary report
[2026-01-14 16:41:06] 2026-01-14 15:40:08,508 | INFO     | --------------------------------------------------
[2026-01-14 16:41:06] 2026-01-14 15:40:08,508 | INFO     | PanDA job id: 6969346176
[2026-01-14 16:41:06] 2026-01-14 15:40:08,508 | INFO     | task id: 48215263
[2026-01-14 16:41:06] 2026-01-14 15:40:08,508 | INFO     | errors: (none)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,508 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 16:41:06] 2026-01-14 15:40:08,509 | INFO     | pilot state: finished 
[2026-01-14 16:41:06] 2026-01-14 15:40:08,509 | INFO     | transexitcode: 0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,509 | INFO     | exeerrorcode: 0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,509 | INFO     | exeerrordiag: 
[2026-01-14 16:41:06] 2026-01-14 15:40:08,509 | INFO     | exitcode: 0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,509 | INFO     | exitmsg: OK
[2026-01-14 16:41:06] 2026-01-14 15:40:08,509 | INFO     | cpuconsumptiontime: 33670 s
[2026-01-14 16:41:06] 2026-01-14 15:40:08,509 | INFO     | nevents: 400
[2026-01-14 16:41:06] 2026-01-14 15:40:08,509 | INFO     | neventsw: 0
[2026-01-14 16:41:06] 2026-01-14 15:40:08,509 | INFO     | pid: 11604
[2026-01-14 16:41:06] 2026-01-14 15:40:08,510 | INFO     | pgrp: 11604
[2026-01-14 16:41:06] 2026-01-14 15:40:08,510 | INFO     | corecount: 8
[2026-01-14 16:41:06] 2026-01-14 15:40:08,510 | INFO     | event service: False
[2026-01-14 16:41:06] 2026-01-14 15:40:08,510 | INFO     | sizes: {0: 2283778, 1: 2283977, 12: 2283977, 23: 2284005, 33: 2284033, 44: 2284089, 55: 2284245, 66: 2284273, 76: 2284301, 87: 2284357, 98: 2284385, 104: 2284955, 
[2026-01-14 16:41:06] 2026-01-14 15:40:08,510 | INFO     | --------------------------------------------------
[2026-01-14 16:41:06] 2026-01-14 15:40:08,510 | INFO     | 
[2026-01-14 16:41:06] 2026-01-14 15:40:08,510 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-14 16:41:06] 2026-01-14 15:40:08,907 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,909 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,909 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 16:41:06] 2026-01-14 15:40:08,909 | INFO     | job 6969346176 has completed (purged errors)
[2026-01-14 16:41:06] 2026-01-14 15:40:08,909 | INFO     | overall cleanup function is called
[2026-01-14 16:41:06] 2026-01-14 15:40:09,918 | INFO     | --- collectZombieJob: --- 10, [11604]
[2026-01-14 16:41:06] 2026-01-14 15:40:09,918 | INFO     | zombie collector waiting for pid 11604
[2026-01-14 16:41:06] 2026-01-14 15:40:09,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 16:41:06] 2026-01-14 15:40:09,918 | INFO     | collected zombie processes
[2026-01-14 16:41:06] 2026-01-14 15:40:09,918 | INFO     | will attempt to kill all subprocesses of pid=11604
[2026-01-14 16:41:06] 2026-01-14 15:40:09,996 | INFO     | process IDs to be killed: [11604] (in reverse order)
[2026-01-14 16:41:06] 2026-01-14 15:40:10,855 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 16:41:06] 2026-01-14 15:40:10,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 16:41:06] 2026-01-14 15:40:10,857 | INFO     | did not find any defunct processes belonging to 11604
[2026-01-14 16:41:06] 2026-01-14 15:40:10,859 | INFO     | did not find any defunct processes belonging to 11604
[2026-01-14 16:41:06] 2026-01-14 15:40:10,859 | INFO     | ready for new job
[2026-01-14 16:41:06] 2026-01-14 15:40:10,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 16:41:06] 2026-01-14 15:40:10,861 | INFO     | ***************************************
[2026-01-14 16:41:06] 2026-01-14 15:40:10,861 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 16:41:06] 2026-01-14 15:40:10,861 | INFO     | ***************************************
[2026-01-14 16:41:06] 2026-01-14 15:40:10,861 | INFO     | 
[2026-01-14 16:41:06] 2026-01-14 15:40:10,862 | INFO     | pilot is running in a VM
[2026-01-14 16:41:06] 2026-01-14 15:40:10,862 | INFO     | architecture information:
[2026-01-14 16:41:06] 2026-01-14 15:40:10,876 | INFO     | executing command: cat /etc/os-release
[2026-01-14 16:41:06] 2026-01-14 15:40:11,226 | INFO     | cat /etc/os-release:
[2026-01-14 16:41:06] NAME="CentOS Linux"
[2026-01-14 16:41:06] VERSION="7 (Core)"
[2026-01-14 16:41:06] ID="centos"
[2026-01-14 16:41:06] ID_LIKE="rhel fedora"
[2026-01-14 16:41:06] VERSION_ID="7"
[2026-01-14 16:41:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 16:41:06] ANSI_COLOR="0;31"
[2026-01-14 16:41:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 16:41:06] HOME_URL="https://www.centos.org/"
[2026-01-14 16:41:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 16:41:06] 
[2026-01-14 16:41:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 16:41:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 16:41:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 16:41:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 16:41:06] 
[2026-01-14 16:41:06] 2026-01-14 15:40:11,227 | INFO     | ***************************************
[2026-01-14 16:41:06] 2026-01-14 15:40:11,730 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-14 16:41:06] 2026-01-14 15:40:11,951 | INFO     | sufficient remaining disk space (493787021312 B)
[2026-01-14 16:41:06] 2026-01-14 15:40:11,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 16:41:06] 2026-01-14 15:40:11,951 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 16:41:06] 2026-01-14 15:40:11,951 | INFO     | update_server=False
[2026-01-14 16:41:06] 2026-01-14 15:40:11,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 16:41:06] 2026-01-14 15:40:11,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 16:41:06] 2026-01-14 15:40:11,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 16:41:06] 2026-01-14 15:40:11,953 | INFO     | aborting loop
[2026-01-14 16:41:06] 2026-01-14 15:40:12,450 | INFO     | all data control threads have been joined
[2026-01-14 16:41:06] 2026-01-14 15:40:12,880 | INFO     | all payload control threads have been joined
[2026-01-14 16:41:06] 2026-01-14 15:40:12,958 | INFO     | [job] retrieve thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:12,959 | INFO     | [job] job monitor thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:13,145 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:13,457 | INFO     | [data] control thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:13,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 16:41:06] 2026-01-14 15:40:13,622 | INFO     | all job control threads have been joined
[2026-01-14 16:41:06] 2026-01-14 15:40:13,645 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:13,711 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:13,765 | INFO     | [payload] validate_post thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:13,886 | INFO     | [payload] control thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:13,959 | INFO     | [data] copytool_out thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:14,014 | INFO     | [job] validate thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:14,074 | INFO     | [data] copytool_in thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:14,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 16:41:06] 2026-01-14 15:40:14,252 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:14,375 | INFO     | [payload] failed_post thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:14,531 | INFO     | [job] queue monitor thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:14,628 | INFO     | [job] control thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:18,258 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 16:41:06] 2026-01-14 15:40:40,427 | INFO     | PID=5123 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 16:41:06] 2026-01-14 15:40:40,427 | INFO     | .. there are 2 such processes running
[2026-01-14 16:41:06] 2026-01-14 15:40:40,429 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 16:41:06] 2026-01-14 15:40:40,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 16:41:06] 2026-01-14 15:40:40,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 16:41:06] 2026-01-14 15:40:54,277 | INFO     | [monitor] cgroup control has ended
[2026-01-14 16:41:06] 2026-01-14 15:40:56,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393591699264)>', '<ExcThread(monitor, started 140392875943680)>']
[2026-01-14 16:41:06] 2026-01-14 15:40:56,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 16:41:06] 2026-01-14 15:40:56,524 | INFO     | [monitor] control thread has ended
[2026-01-14 16:41:06] 2026-01-14 15:41:01,276 | INFO     | all workflow threads have been joined
[2026-01-14 16:41:06] 2026-01-14 15:41:01,276 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 16:41:06] 2026-01-14 15:41:01,276 | INFO     | traces error code: 0
[2026-01-14 16:41:06] 2026-01-14 15:41:01,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 16:41:06] 2026-01-14 15:41:01,749 [wrapper] ==== pilot stdout END ====
[2026-01-14 16:41:06] 2026-01-14 15:41:01,836 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 16:41:06] 2026-01-14 15:41:01,943 [wrapper] pilotpid: 5123
[2026-01-14 16:41:06] 2026-01-14 15:41:02,059 [wrapper] Pilot exit status: 0
[2026-01-14 16:41:06] 2026-01-14 15:41:02,531 [wrapper] pandaids: 6969346176
[2026-01-14 16:41:06] 2026-01-14 15:41:03,335 [wrapper] cleanup supervisor_pilot 30440 5124
[2026-01-14 16:41:06] 2026-01-14 15:41:03,449 [wrapper] Test setup, not cleaning
[2026-01-14 16:41:06] 2026-01-14 15:41:03,566 [wrapper] apfmon messages muted
[2026-01-14 16:41:06] 2026-01-14 15:41:03,676 [wrapper] ==== wrapper stdout END ====
[2026-01-14 16:41:06] 2026-01-14 15:41:03,753 [wrapper] ==== wrapper stderr END ====
[2026-01-14 16:41:06]  *** Error codes and diagnostics ***
[2026-01-14 16:41:06]     "exeErrorCode": 0,
[2026-01-14 16:41:06]     "exeErrorDiag": "",
[2026-01-14 16:41:06]     "pilotErrorCode": 0,
[2026-01-14 16:41:06]     "pilotErrorDiag": "",
[2026-01-14 16:41:06]  *** Listing of results directory ***
[2026-01-14 16:41:06] total 738216
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc    579449 Jan 14 06:14 pilot3.tar.gz
[2026-01-14 16:41:06] -rwx------. 1 boinc boinc     36322 Jan 14 06:15 runpilot2-wrapper.sh
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc      5112 Jan 14 06:17 queuedata.json
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc       100 Jan 14 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 16:41:06] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 13:49 run_atlas
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc       105 Jan 14 13:49 job.xml
[2026-01-14 16:41:06] -rw-r--r--. 2 boinc boinc 597857747 Jan 14 13:49 EVNT.32794306._000613.pool.root.1
[2026-01-14 16:41:06] -rw-r--r--. 2 boinc boinc     15847 Jan 14 13:49 start_atlas.sh
[2026-01-14 16:41:06] drwxrwx--x. 2 boinc boinc        68 Jan 14 13:49 shared
[2026-01-14 16:41:06] -rw-r--r--. 2 boinc boinc    592397 Jan 14 13:49 input.tar.gz
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc      6389 Jan 14 13:49 init_data.xml
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc         0 Jan 14 13:49 boinc_lockfile
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc      2507 Jan 14 13:50 pandaJob.out
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc    997566 Jan 14 13:54 agis_schedconf.cvmfs.json
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc   1516246 Jan 14 13:54 agis_ddmendpoints.agis.ALL.json
[2026-01-14 16:41:06] drwx------. 5 boinc boinc      4096 Jan 14 13:54 pilot3
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc 150660396 Jan 14 16:36 HITS.48215263._015321.pool.root.1
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc       532 Jan 14 16:37 boinc_task_state.xml
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc      1014 Jan 14 16:38 memory_monitor_summary.json
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc    404283 Jan 14 16:38 log.48215263._015321.job.log.tgz.1
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc      7774 Jan 14 16:40 heartbeat.json
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc        95 Jan 14 16:40 pilot_heartbeat.json
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc      8192 Jan 14 16:40 boinc_mmap_file
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc        28 Jan 14 16:40 wrapper_checkpoint.txt
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc      4883 Jan 14 16:41 pilotlog.txt
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc   1349232 Jan 14 16:41 log.48215263._015321.job.log.1
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc       357 Jan 14 16:41 output.list
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc       620 Jan 14 16:41 runtime_log
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc   1771520 Jan 14 16:41 result.tar.gz
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc      8817 Jan 14 16:41 runtime_log.err
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc       654 Jan 14 16:41 gYmNDmnO8z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmD3jKDmjkX6Ko.diag
[2026-01-14 16:41:06] -rw-r--r--. 1 boinc boinc     20783 Jan 14 16:41 stderr.txt
[2026-01-14 16:41:06] HITS file was successfully produced:
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc 150660396 Jan 14 16:36 shared/HITS.pool.root.1
[2026-01-14 16:41:06]  *** Contents of shared directory: ***
[2026-01-14 16:41:06] total 733308
[2026-01-14 16:41:06] -rw-r--r--. 2 boinc boinc 597857747 Jan 14 13:49 ATLAS.root_0
[2026-01-14 16:41:06] -rw-r--r--. 2 boinc boinc     15847 Jan 14 13:49 start_atlas.sh
[2026-01-14 16:41:06] -rw-r--r--. 2 boinc boinc    592397 Jan 14 13:49 input.tar.gz
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc 150660396 Jan 14 16:36 HITS.pool.root.1
[2026-01-14 16:41:06] -rw-------. 1 boinc boinc   1771520 Jan 14 16:41 result.tar.gz
16:41:08 (1372): run_atlas exited; CPU time 33768.282452
16:41:08 (1372): called boinc_finish(0)

</stderr_txt>
]]>

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