Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:43:19 (1326774): wrapper (7.7.26015): starting
11:43:19 (1326774): wrapper: running run_atlas (--nthreads 3)
[2026-01-14 11:43:19] Arguments: --nthreads 3
[2026-01-14 11:43:19] Threads: 3
[2026-01-14 11:43:19] Checking for CVMFS
[2026-01-14 11:43:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 11:43:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 11:43:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 11:43:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 11:43:19] 2.9.2.0 1053361 666 75364 155128 2 56 22676406 36864000 0 130560 0 722804 99.992 26213 24775 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 11:43:19] CVMFS is ok
[2026-01-14 11:43:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 11:43:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 11:43:19] Further information can be found at the LHC@home message board.
[2026-01-14 11:43:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 11:43:19] Checking for apptainer binary...
[2026-01-14 11:43:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 11:43:19] Running /usr/bin/apptainer --version
[2026-01-14 11:43:19] apptainer version 1.4.1-1.1
[2026-01-14 11:43:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 11:43:19] magicA246a
[2026-01-14 11:43:19] apptainer works
[2026-01-14 11:43:19] Set ATHENA_PROC_NUMBER=3
[2026-01-14 11:43:19] Set ATHENA_CORE_NUMBER=3
[2026-01-14 11:43:19] Starting ATLAS job with PandaID=6969346057
[2026-01-14 11:43:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 12:37:34]  *** The last 200 lines of the pilot log: ***
[2026-01-14 12:37:34] 2026-01-14 11:37:09,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 12:37:34] 2026-01-14 11:37:09,347 | INFO     | collected zombie processes
[2026-01-14 12:37:34] 2026-01-14 11:37:09,347 | INFO     | will attempt to kill all subprocesses of pid=1336940
[2026-01-14 12:37:34] 2026-01-14 11:37:09,405 | INFO     | process IDs to be killed: [1336940] (in reverse order)
[2026-01-14 12:37:34] 2026-01-14 11:37:09,435 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 12:37:34] 2026-01-14 11:37:09,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 12:37:34] 2026-01-14 11:37:09,437 | INFO     | did not find any defunct processes belonging to 1336940
[2026-01-14 12:37:34] 2026-01-14 11:37:09,439 | INFO     | did not find any defunct processes belonging to 1336940
[2026-01-14 12:37:34] 2026-01-14 11:37:09,439 | INFO     | ready for new job
[2026-01-14 12:37:34] 2026-01-14 11:37:09,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 12:37:34] 2026-01-14 11:37:09,440 | INFO     | ***************************************
[2026-01-14 12:37:34] 2026-01-14 11:37:09,440 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 12:37:34] 2026-01-14 11:37:09,440 | INFO     | ***************************************
[2026-01-14 12:37:34] 2026-01-14 11:37:09,440 | INFO     | 
[2026-01-14 12:37:34] 2026-01-14 11:37:09,440 | INFO     | architecture information:
[2026-01-14 12:37:34] 2026-01-14 11:37:09,440 | INFO     | executing command: cat /etc/os-release
[2026-01-14 12:37:34] 2026-01-14 11:37:09,449 | INFO     | cat /etc/os-release:
[2026-01-14 12:37:34] NAME="CentOS Linux"
[2026-01-14 12:37:34] VERSION="7 (Core)"
[2026-01-14 12:37:34] ID="centos"
[2026-01-14 12:37:34] ID_LIKE="rhel fedora"
[2026-01-14 12:37:34] VERSION_ID="7"
[2026-01-14 12:37:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 12:37:34] ANSI_COLOR="0;31"
[2026-01-14 12:37:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 12:37:34] HOME_URL="https://www.centos.org/"
[2026-01-14 12:37:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 12:37:34] 
[2026-01-14 12:37:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 12:37:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 12:37:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 12:37:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 12:37:34] 
[2026-01-14 12:37:34] 2026-01-14 11:37:09,449 | INFO     | ***************************************
[2026-01-14 12:37:34] 2026-01-14 11:37:09,952 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-14 12:37:34] 2026-01-14 11:37:09,963 | INFO     | sufficient remaining disk space (281085476864 B)
[2026-01-14 12:37:34] 2026-01-14 11:37:09,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 12:37:34] 2026-01-14 11:37:09,964 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 12:37:34] 2026-01-14 11:37:09,964 | INFO     | update_server=False
[2026-01-14 12:37:34] 2026-01-14 11:37:09,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 12:37:34] 2026-01-14 11:37:09,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 12:37:34] 2026-01-14 11:37:09,964 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-14 12:37:34] 2026-01-14 11:37:09,964 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 12:37:34] 2026-01-14 11:37:09,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 12:37:34] 2026-01-14 11:37:09,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 12:37:34] 2026-01-14 11:37:10,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 12:37:34] 2026-01-14 11:37:10,079 | INFO     | aborting loop
[2026-01-14 12:37:34] 2026-01-14 11:37:10,324 | INFO     | all job control threads have been joined
[2026-01-14 12:37:34] 2026-01-14 11:37:10,421 | INFO     | all data control threads have been joined
[2026-01-14 12:37:34] 2026-01-14 11:37:10,551 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 12:37:34] 2026-01-14 11:37:10,967 | INFO     | [job] retrieve thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:10,969 | INFO     | [job] queue monitor thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:10,981 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:11,085 | INFO     | [job] job monitor thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:11,093 | INFO     | [payload] validate_post thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:11,221 | INFO     | [payload] failed_post thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:11,271 | INFO     | all payload control threads have been joined
[2026-01-14 12:37:34] 2026-01-14 11:37:11,329 | INFO     | [job] control thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:11,426 | INFO     | [data] control thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:11,927 | INFO     | [data] copytool_in thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:12,073 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:12,277 | INFO     | [payload] control thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:12,388 | INFO     | [job] validate thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:12,401 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:12,556 | INFO     | [data] copytool_out thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:13,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 12:37:34] 2026-01-14 11:37:17,084 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:20,029 | INFO     | job.realtimelogging is not enabled
[2026-01-14 12:37:34] 2026-01-14 11:37:21,035 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 12:37:34] 2026-01-14 11:37:28,808 | INFO     | [monitor] cgroup control has ended
[2026-01-14 12:37:34] 2026-01-14 11:37:29,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691312023360)>', '<ExcThread(monitor, started 140690310821632)>']
[2026-01-14 12:37:34] 2026-01-14 11:37:30,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 12:37:34] 2026-01-14 11:37:30,063 | INFO     | [monitor] control thread has ended
[2026-01-14 12:37:34] 2026-01-14 11:37:34,619 | INFO     | all workflow threads have been joined
[2026-01-14 12:37:34] 2026-01-14 11:37:34,620 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 12:37:34] 2026-01-14 11:37:34,620 | INFO     | traces error code: 0
[2026-01-14 12:37:34] 2026-01-14 11:37:34,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 12:37:34] 2026-01-14 11:37:34,673 [wrapper] ==== pilot stdout END ====
[2026-01-14 12:37:34] 2026-01-14 11:37:34,675 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 12:37:34] 2026-01-14 11:37:34,677 [wrapper] pilotpid: 1330492
[2026-01-14 12:37:34] 2026-01-14 11:37:34,680 [wrapper] Pilot exit status: 0
[2026-01-14 12:37:34] 2026-01-14 11:37:34,687 [wrapper] pandaids: 6969346057
[2026-01-14 12:37:34] 2026-01-14 11:37:34,706 [wrapper] cleanup supervisor_pilot 1347283 1330493
[2026-01-14 12:37:34] 2026-01-14 11:37:34,708 [wrapper] Test setup, not cleaning
[2026-01-14 12:37:34] 2026-01-14 11:37:34,710 [wrapper] apfmon messages muted
[2026-01-14 12:37:34] 2026-01-14 11:37:34,713 [wrapper] ==== wrapper stdout END ====
[2026-01-14 12:37:34] 2026-01-14 11:37:34,715 [wrapper] ==== wrapper stderr END ====
[2026-01-14 12:37:34]  *** Error codes and diagnostics ***
[2026-01-14 12:37:34]     "exeErrorCode": 0,
[2026-01-14 12:37:34]     "exeErrorDiag": "",
[2026-01-14 12:37:34]     "pilotErrorCode": 0,
[2026-01-14 12:37:34]     "pilotErrorDiag": "",
[2026-01-14 12:37:34]  *** Listing of results directory ***
[2026-01-14 12:37:34] total 731688
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc    579449 Jan 14 06:14 pilot3.tar.gz
[2026-01-14 12:37:34] -rwx------ 1 boinc boinc     36322 Jan 14 06:14 runpilot2-wrapper.sh
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc      5112 Jan 14 06:17 queuedata.json
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc       100 Jan 14 11:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 12:37:34] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 11:43 run_atlas
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc       105 Jan 14 11:43 job.xml
[2026-01-14 12:37:34] -rw-r--r-- 2 boinc boinc 594389398 Jan 14 11:43 EVNT.32794306._000609.pool.root.1
[2026-01-14 12:37:34] -rw-r--r-- 2 boinc boinc    592396 Jan 14 11:43 input.tar.gz
[2026-01-14 12:37:34] -rw-r--r-- 2 boinc boinc     15847 Jan 14 11:43 start_atlas.sh
[2026-01-14 12:37:34] drwxrwx--x 2 boinc boinc      4096 Jan 14 11:43 shared
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc         0 Jan 14 11:43 boinc_setup_complete
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc      6447 Jan 14 11:43 init_data.xml
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc         0 Jan 14 11:43 boinc_lockfile
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc      2506 Jan 14 11:43 pandaJob.out
[2026-01-14 12:37:34] -rw------- 1 boinc boinc    997226 Jan 14 11:43 agis_schedconf.cvmfs.json
[2026-01-14 12:37:34] -rw------- 1 boinc boinc   1516246 Jan 14 11:43 agis_ddmendpoints.agis.ALL.json
[2026-01-14 12:37:34] drwx------ 5 boinc boinc      4096 Jan 14 11:43 pilot3
[2026-01-14 12:37:34] -rw------- 1 boinc boinc        95 Jan 14 12:36 pilot_heartbeat.json
[2026-01-14 12:37:34] -rw------- 1 boinc boinc 149534195 Jan 14 12:36 HITS.48215263._015202.pool.root.1
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc       529 Jan 14 12:36 boinc_task_state.xml
[2026-01-14 12:37:34] -rw------- 1 boinc boinc      1017 Jan 14 12:36 memory_monitor_summary.json
[2026-01-14 12:37:34] -rw------- 1 boinc boinc    215569 Jan 14 12:37 log.48215263._015202.job.log.tgz.1
[2026-01-14 12:37:34] -rw------- 1 boinc boinc      7754 Jan 14 12:37 heartbeat.json
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc        26 Jan 14 12:37 wrapper_checkpoint.txt
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc      8192 Jan 14 12:37 boinc_mmap_file
[2026-01-14 12:37:34] -rw------- 1 boinc boinc      4628 Jan 14 12:37 pilotlog.txt
[2026-01-14 12:37:34] -rw------- 1 boinc boinc    491444 Jan 14 12:37 log.48215263._015202.job.log.1
[2026-01-14 12:37:34] -rw------- 1 boinc boinc       357 Jan 14 12:37 output.list
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc       620 Jan 14 12:37 runtime_log
[2026-01-14 12:37:34] -rw------- 1 boinc boinc    727040 Jan 14 12:37 result.tar.gz
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc      8917 Jan 14 12:37 runtime_log.err
[2026-01-14 12:37:34] -rw------- 1 boinc boinc       660 Jan 14 12:37 fy1MDmbO8z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmj1jKDmWBadKn.diag
[2026-01-14 12:37:34] -rw-r--r-- 1 boinc boinc     10433 Jan 14 12:37 stderr.txt
[2026-01-14 12:37:34] HITS file was successfully produced:
[2026-01-14 12:37:34] -rw------- 1 boinc boinc 149534195 Jan 14 12:36 shared/HITS.pool.root.1
[2026-01-14 12:37:34]  *** Contents of shared directory: ***
[2026-01-14 12:37:34] total 727808
[2026-01-14 12:37:34] -rw-r--r-- 2 boinc boinc 594389398 Jan 14 11:43 ATLAS.root_0
[2026-01-14 12:37:34] -rw-r--r-- 2 boinc boinc    592396 Jan 14 11:43 input.tar.gz
[2026-01-14 12:37:34] -rw-r--r-- 2 boinc boinc     15847 Jan 14 11:43 start_atlas.sh
[2026-01-14 12:37:34] -rw------- 1 boinc boinc 149534195 Jan 14 12:36 HITS.pool.root.1
[2026-01-14 12:37:34] -rw------- 1 boinc boinc    727040 Jan 14 12:37 result.tar.gz
12:37:36 (1326774): run_atlas exited; CPU time 9064.292767
12:37:36 (1326774): called boinc_finish(0)

</stderr_txt>
]]>

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