Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:00:37 (27923): wrapper (7.7.26015): starting
04:00:37 (27923): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 04:00:37] Arguments: --nthreads 8
[2026-01-14 04:00:37] Threads: 8
[2026-01-14 04:00:37] Checking for CVMFS
[2026-01-14 04:00:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 04:00:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 04:00:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 04:00:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 04:00:37] 2.11.2.0 8318 188102 131288 155124 1 188 13998078 18432000 1833 130560 0 124768001 99.979 7428589 31679 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 04:00:37] CVMFS is ok
[2026-01-14 04:00:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 04:00:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 04:00:37] Further information can be found at the LHC@home message board.
[2026-01-14 04:00:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 04:00:37] Checking for apptainer binary...
[2026-01-14 04:00:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 04:00:37] Running /usr/bin/apptainer --version
[2026-01-14 04:00:37] apptainer version 1.3.2-1.el7
[2026-01-14 04:00:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 04:00:38] c-206-28.aglt2.org
[2026-01-14 04:00:38] apptainer works
[2026-01-14 04:00:38] Set ATHENA_PROC_NUMBER=8
[2026-01-14 04:00:38] Set ATHENA_CORE_NUMBER=8
[2026-01-14 04:00:38] Starting ATLAS job with PandaID=6969346050
[2026-01-14 04:00:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 05:58:06]  *** The last 200 lines of the pilot log: ***
[2026-01-14 05:58:06] 2026-01-14 10:57:07,912 | INFO     | intersect: -67573427444.41862
[2026-01-14 05:58:06] 2026-01-14 10:57:07,912 | INFO     | chi2: 1.4402453128388308
[2026-01-14 05:58:06] 2026-01-14 10:57:07,912 | INFO     | sum of square deviations: 401533110.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,913 | INFO     | sum of deviations: 16643558603.000002
[2026-01-14 05:58:06] 2026-01-14 10:57:07,914 | INFO     | mean x: 1768384569.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,914 | INFO     | mean y: 2482073.1834862386
[2026-01-14 05:58:06] 2026-01-14 10:57:07,914 | INFO     | intersect: -73297107608.95355
[2026-01-14 05:58:06] 2026-01-14 10:57:07,914 | INFO     | chi2: 1.4424483307904359
[2026-01-14 05:58:06] 2026-01-14 10:57:07,914 | INFO     | current chi2=1.4424483307904359 (change=-0.1529612998540321 %)
[2026-01-14 05:58:06] 2026-01-14 10:57:07,915 | INFO     | right removable region: 108
[2026-01-14 05:58:06] 2026-01-14 10:57:07,915 | INFO     | sum of square deviations: 401533110.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,916 | INFO     | sum of deviations: -216198884.0000001
[2026-01-14 05:58:06] 2026-01-14 10:57:07,916 | INFO     | mean x: 1768384874.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,916 | INFO     | mean y: 2530498.4036697247
[2026-01-14 05:58:06] 2026-01-14 10:57:07,916 | INFO     | intersect: 954688182.8379142
[2026-01-14 05:58:06] 2026-01-14 10:57:07,917 | INFO     | chi2: 0.011083595938774608
[2026-01-14 05:58:06] 2026-01-14 10:57:07,917 | INFO     | current chi2=0.011083595938774608 (change=99.23043693737645 %)
[2026-01-14 05:58:06] 2026-01-14 10:57:07,917 | INFO     | sum of square deviations: 348769330.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,918 | INFO     | sum of deviations: 892391417.5
[2026-01-14 05:58:06] 2026-01-14 10:57:07,918 | INFO     | mean x: 1768385026.5
[2026-01-14 05:58:06] 2026-01-14 10:57:07,918 | INFO     | mean y: 2527266.644230769
[2026-01-14 05:58:06] 2026-01-14 10:57:07,919 | INFO     | intersect: -4522215836.437999
[2026-01-14 05:58:06] 2026-01-14 10:57:07,919 | INFO     | chi2: 0.00679104315644188
[2026-01-14 05:58:06] 2026-01-14 10:57:07,919 | INFO     | current chi2=0.00679104315644188 (change=38.72888190840443 %)
[2026-01-14 05:58:06] 2026-01-14 10:57:07,919 | INFO     | sum of square deviations: 300842850.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,920 | INFO     | sum of deviations: 1626807231.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,920 | INFO     | mean x: 1768385179.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,920 | INFO     | mean y: 2525010.606060606
[2026-01-14 05:58:06] 2026-01-14 10:57:07,921 | INFO     | intersect: -9560015021.14284
[2026-01-14 05:58:06] 2026-01-14 10:57:07,921 | INFO     | chi2: 0.00016864564413059525
[2026-01-14 05:58:06] 2026-01-14 10:57:07,921 | INFO     | current chi2=0.00016864564413059525 (change=97.51664596667125 %)
[2026-01-14 05:58:06] 2026-01-14 10:57:07,921 | INFO     | sum of square deviations: 257521107.5
[2026-01-14 05:58:06] 2026-01-14 10:57:07,922 | INFO     | sum of deviations: 1282830762.5
[2026-01-14 05:58:06] 2026-01-14 10:57:07,922 | INFO     | mean x: 1768385331.5
[2026-01-14 05:58:06] 2026-01-14 10:57:07,922 | INFO     | mean y: 2526214.6063829786
[2026-01-14 05:58:06] 2026-01-14 10:57:07,923 | INFO     | intersect: -8806612287.572357
[2026-01-14 05:58:06] 2026-01-14 10:57:07,923 | INFO     | chi2: 9.684812403653962e-05
[2026-01-14 05:58:06] 2026-01-14 10:57:07,923 | INFO     | current chi2=9.684812403653962e-05 (change=42.5730059404661 %)
[2026-01-14 05:58:06] 2026-01-14 10:57:07,923 | INFO     | sum of square deviations: 218571540.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,924 | INFO     | sum of deviations: 1053313839.9999999
[2026-01-14 05:58:06] 2026-01-14 10:57:07,924 | INFO     | mean x: 1768385484.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,924 | INFO     | mean y: 2527112.584269663
[2026-01-14 05:58:06] 2026-01-14 10:57:07,925 | INFO     | intersect: -8519464839.123159
[2026-01-14 05:58:06] 2026-01-14 10:57:07,925 | INFO     | chi2: 9.066524745752006e-05
[2026-01-14 05:58:06] 2026-01-14 10:57:07,925 | INFO     | current chi2=9.066524745752006e-05 (change=6.384095345705227 %)
[2026-01-14 05:58:06] 2026-01-14 10:57:07,925 | INFO     | left removable region: 50
[2026-01-14 05:58:06] 2026-01-14 10:57:07,926 | INFO     | sum of square deviations: 60482994.5
[2026-01-14 05:58:06] 2026-01-14 10:57:07,926 | INFO     | sum of deviations: 231167064.0
[2026-01-14 05:58:06] 2026-01-14 10:57:07,926 | INFO     | mean x: 1768386063.5
[2026-01-14 05:58:06] 2026-01-14 10:57:07,926 | INFO     | mean y: 2530807.6551724137
[2026-01-14 05:58:06] 2026-01-14 10:57:07,927 | INFO     | intersect: -6756271690.422408
[2026-01-14 05:58:06] 2026-01-14 10:57:07,927 | INFO     | chi2: 5.633358221886667e-05
[2026-01-14 05:58:06] 2026-01-14 10:57:07,927 | INFO     | current memory leak: 3.82 B/s (using 58 data points, chi2=0.00)
[2026-01-14 05:58:06] 2026-01-14 10:57:07,928 | INFO     | could have reported an average CPU frequency of 2482 MHz (7 samples)
[2026-01-14 05:58:06] 2026-01-14 10:57:07,928 | INFO     | ..............................
[2026-01-14 05:58:06] 2026-01-14 10:57:07,928 | INFO     | . Timing measurements:
[2026-01-14 05:58:06] 2026-01-14 10:57:07,928 | INFO     | . get job = 0 s
[2026-01-14 05:58:06] 2026-01-14 10:57:07,928 | INFO     | . initial setup = 2 s
[2026-01-14 05:58:06] 2026-01-14 10:57:07,928 | INFO     | . payload setup = 5 s
[2026-01-14 05:58:06] 2026-01-14 10:57:07,929 | INFO     | . stage-in = 0 s
[2026-01-14 05:58:06] 2026-01-14 10:57:07,929 | INFO     | . payload execution = 6945 s
[2026-01-14 05:58:06] 2026-01-14 10:57:07,929 | INFO     | . stage-out = 0 s
[2026-01-14 05:58:06] 2026-01-14 10:57:07,929 | INFO     | . log creation = 0 s
[2026-01-14 05:58:06] 2026-01-14 10:57:07,929 | INFO     | ..............................
[2026-01-14 05:58:06] 2026-01-14 10:57:08,010 | INFO     | 
[2026-01-14 05:58:06] 2026-01-14 10:57:08,010 | INFO     | job summary report
[2026-01-14 05:58:06] 2026-01-14 10:57:08,010 | INFO     | --------------------------------------------------
[2026-01-14 05:58:06] 2026-01-14 10:57:08,011 | INFO     | PanDA job id: 6969346050
[2026-01-14 05:58:06] 2026-01-14 10:57:08,011 | INFO     | task id: 48215263
[2026-01-14 05:58:06] 2026-01-14 10:57:08,011 | INFO     | errors: (none)
[2026-01-14 05:58:06] 2026-01-14 10:57:08,011 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 05:58:06] 2026-01-14 10:57:08,011 | INFO     | pilot state: finished 
[2026-01-14 05:58:06] 2026-01-14 10:57:08,011 | INFO     | transexitcode: 0
[2026-01-14 05:58:06] 2026-01-14 10:57:08,011 | INFO     | exeerrorcode: 0
[2026-01-14 05:58:06] 2026-01-14 10:57:08,011 | INFO     | exeerrordiag: 
[2026-01-14 05:58:06] 2026-01-14 10:57:08,011 | INFO     | exitcode: 0
[2026-01-14 05:58:06] 2026-01-14 10:57:08,011 | INFO     | exitmsg: OK
[2026-01-14 05:58:06] 2026-01-14 10:57:08,012 | INFO     | cpuconsumptiontime: 52151 s
[2026-01-14 05:58:06] 2026-01-14 10:57:08,012 | INFO     | nevents: 400
[2026-01-14 05:58:06] 2026-01-14 10:57:08,012 | INFO     | neventsw: 0
[2026-01-14 05:58:06] 2026-01-14 10:57:08,012 | INFO     | pid: 5814
[2026-01-14 05:58:06] 2026-01-14 10:57:08,012 | INFO     | pgrp: 5814
[2026-01-14 05:58:06] 2026-01-14 10:57:08,012 | INFO     | corecount: 8
[2026-01-14 05:58:06] 2026-01-14 10:57:08,012 | INFO     | event service: False
[2026-01-14 05:58:06] 2026-01-14 10:57:08,012 | INFO     | sizes: {0: 2283835, 1: 2283977, 4: 2284239, 11: 2284267, 6953: 2311436, 6956: 2320618, 6963: 2320756}
[2026-01-14 05:58:06] 2026-01-14 10:57:08,012 | INFO     | --------------------------------------------------
[2026-01-14 05:58:06] 2026-01-14 10:57:08,012 | INFO     | 
[2026-01-14 05:58:06] 2026-01-14 10:57:08,013 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-14 05:58:06] 2026-01-14 10:57:08,027 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,027 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,027 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,027 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,029 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 05:58:06] 2026-01-14 10:57:08,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,029 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 05:58:06] 2026-01-14 10:57:08,029 | INFO     | job 6969346050 has completed (purged errors)
[2026-01-14 05:58:06] 2026-01-14 10:57:08,029 | INFO     | overall cleanup function is called
[2026-01-14 05:58:06] 2026-01-14 10:57:09,036 | INFO     | --- collectZombieJob: --- 10, [5814]
[2026-01-14 05:58:06] 2026-01-14 10:57:09,037 | INFO     | zombie collector waiting for pid 5814
[2026-01-14 05:58:06] 2026-01-14 10:57:09,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 05:58:06] 2026-01-14 10:57:09,037 | INFO     | collected zombie processes
[2026-01-14 05:58:06] 2026-01-14 10:57:09,037 | INFO     | will attempt to kill all subprocesses of pid=5814
[2026-01-14 05:58:06] 2026-01-14 10:57:09,201 | INFO     | process IDs to be killed: [5814] (in reverse order)
[2026-01-14 05:58:06] 2026-01-14 10:57:09,242 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 05:58:06] 2026-01-14 10:57:09,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 05:58:06] 2026-01-14 10:57:09,245 | INFO     | did not find any defunct processes belonging to 5814
[2026-01-14 05:58:06] 2026-01-14 10:57:09,248 | INFO     | did not find any defunct processes belonging to 5814
[2026-01-14 05:58:06] 2026-01-14 10:57:09,248 | INFO     | ready for new job
[2026-01-14 05:58:06] 2026-01-14 10:57:09,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 05:58:06] 2026-01-14 10:57:09,249 | INFO     | ***************************************
[2026-01-14 05:58:06] 2026-01-14 10:57:09,249 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 05:58:06] 2026-01-14 10:57:09,249 | INFO     | ***************************************
[2026-01-14 05:58:06] 2026-01-14 10:57:09,249 | INFO     | 
[2026-01-14 05:58:06] 2026-01-14 10:57:09,250 | INFO     | architecture information:
[2026-01-14 05:58:06] 2026-01-14 10:57:09,251 | INFO     | executing command: cat /etc/os-release
[2026-01-14 05:58:06] 2026-01-14 10:57:09,259 | INFO     | cat /etc/os-release:
[2026-01-14 05:58:06] NAME="CentOS Linux"
[2026-01-14 05:58:06] VERSION="7 (Core)"
[2026-01-14 05:58:06] ID="centos"
[2026-01-14 05:58:06] ID_LIKE="rhel fedora"
[2026-01-14 05:58:06] VERSION_ID="7"
[2026-01-14 05:58:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 05:58:06] ANSI_COLOR="0;31"
[2026-01-14 05:58:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 05:58:06] HOME_URL="https://www.centos.org/"
[2026-01-14 05:58:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 05:58:06] 
[2026-01-14 05:58:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 05:58:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 05:58:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 05:58:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 05:58:06] 
[2026-01-14 05:58:06] 2026-01-14 10:57:09,259 | INFO     | ***************************************
[2026-01-14 05:58:06] 2026-01-14 10:57:09,762 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-14 05:58:06] 2026-01-14 10:57:09,776 | INFO     | sufficient remaining disk space (25965887488 B)
[2026-01-14 05:58:06] 2026-01-14 10:57:09,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 05:58:06] 2026-01-14 10:57:09,777 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 05:58:06] 2026-01-14 10:57:09,777 | INFO     | update_server=False
[2026-01-14 05:58:06] 2026-01-14 10:57:09,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 05:58:06] 2026-01-14 10:57:09,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:58:06] 2026-01-14 10:57:09,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:58:06] 2026-01-14 10:57:09,778 | INFO     | aborting loop
[2026-01-14 05:58:06] 2026-01-14 10:57:10,087 | INFO     | all data control threads have been joined
[2026-01-14 05:58:06] 2026-01-14 10:57:10,499 | INFO     | all payload control threads have been joined
[2026-01-14 05:58:06] 2026-01-14 10:57:10,783 | INFO     | [job] retrieve thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:10,784 | INFO     | [job] job monitor thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:10,784 | INFO     | [job] queue monitor thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:10,892 | INFO     | all job control threads have been joined
[2026-01-14 05:58:06] 2026-01-14 10:57:11,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 05:58:06] 2026-01-14 10:57:11,093 | INFO     | [data] control thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:11,128 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:11,133 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:11,161 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 05:58:06] 2026-01-14 10:57:11,281 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:11,504 | INFO     | [payload] control thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:11,810 | INFO     | [data] copytool_in thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:11,895 | INFO     | [job] control thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:12,055 | INFO     | [payload] validate_post thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:12,151 | INFO     | [job] validate thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:12,343 | INFO     | [payload] failed_post thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:13,087 | INFO     | [data] copytool_out thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:15,169 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:20,280 | INFO     | job.realtimelogging is not enabled
[2026-01-14 05:58:06] 2026-01-14 10:57:21,286 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 05:58:06] 2026-01-14 10:57:40,388 | INFO     | PID=31615 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 05:58:06] 2026-01-14 10:57:40,388 | INFO     | .. there are 3 such processes running
[2026-01-14 05:58:06] 2026-01-14 10:57:40,388 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 05:58:06] 2026-01-14 10:57:40,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 05:58:06] 2026-01-14 10:57:40,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 05:58:06] 2026-01-14 10:58:00,360 | INFO     | [monitor] cgroup control has ended
[2026-01-14 05:58:06] 2026-01-14 10:58:00,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140410050373440)>', '<ExcThread(monitor, started 140409309222656)>']
[2026-01-14 05:58:06] 2026-01-14 10:58:01,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 05:58:06] 2026-01-14 10:58:01,482 | INFO     | [monitor] control thread has ended
[2026-01-14 05:58:06] 2026-01-14 10:58:05,948 | INFO     | all workflow threads have been joined
[2026-01-14 05:58:06] 2026-01-14 10:58:05,949 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 05:58:06] 2026-01-14 10:58:05,949 | INFO     | traces error code: 0
[2026-01-14 05:58:06] 2026-01-14 10:58:05,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 05:58:06] 2026-01-14 10:58:06,064 [wrapper] ==== pilot stdout END ====
[2026-01-14 05:58:06] 2026-01-14 10:58:06,067 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 05:58:06] 2026-01-14 10:58:06,071 [wrapper] pilotpid: 31615
[2026-01-14 05:58:06] 2026-01-14 10:58:06,073 [wrapper] Pilot exit status: 0
[2026-01-14 05:58:06] 2026-01-14 10:58:06,083 [wrapper] pandaids: 6969346050
[2026-01-14 05:58:06] 2026-01-14 10:58:06,127 [wrapper] cleanup supervisor_pilot 27546 31616
[2026-01-14 05:58:06] 2026-01-14 10:58:06,130 [wrapper] Test setup, not cleaning
[2026-01-14 05:58:06] 2026-01-14 10:58:06,133 [wrapper] apfmon messages muted
[2026-01-14 05:58:06] 2026-01-14 10:58:06,135 [wrapper] ==== wrapper stdout END ====
[2026-01-14 05:58:06] 2026-01-14 10:58:06,139 [wrapper] ==== wrapper stderr END ====
[2026-01-14 05:58:06]  *** Error codes and diagnostics ***
[2026-01-14 05:58:06]     "exeErrorCode": 0,
[2026-01-14 05:58:06]     "exeErrorDiag": "",
[2026-01-14 05:58:06]     "pilotErrorCode": 0,
[2026-01-14 05:58:06]     "pilotErrorDiag": "",
[2026-01-14 05:58:06]  *** Listing of results directory ***
[2026-01-14 05:58:06] total 747128
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 00:14 pilot3.tar.gz
[2026-01-14 05:58:06] -rwx------ 1 boincer umatlas     36322 Jan 14 00:14 runpilot2-wrapper.sh
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 00:17 queuedata.json
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas       100 Jan 14 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 05:58:06] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 04:00 run_atlas
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas       105 Jan 14 04:00 job.xml
[2026-01-14 05:58:06] -rw-r--r-- 2 boincer umatlas 599123602 Jan 14 04:00 EVNT.32794306._000608.pool.root.1
[2026-01-14 05:58:06] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 04:00 start_atlas.sh
[2026-01-14 05:58:06] drwxrwx--x 2 boincer umatlas      4096 Jan 14 04:00 shared
[2026-01-14 05:58:06] -rw-r--r-- 2 boincer umatlas    592402 Jan 14 04:00 input.tar.gz
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas         0 Jan 14 04:00 boinc_lockfile
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas      2507 Jan 14 04:00 pandaJob.out
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas        57 Jan 14 04:00 setup.sh.local
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas    997218 Jan 14 04:00 agis_schedconf.cvmfs.json
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas   1516246 Jan 14 04:00 agis_ddmendpoints.agis.ALL.json
[2026-01-14 05:58:06] drwx------ 5 boincer umatlas      4096 Jan 14 04:00 pilot3
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas 159261043 Jan 14 05:56 HITS.48215263._015195.pool.root.1
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas       530 Jan 14 05:56 boinc_task_state.xml
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas      1065 Jan 14 05:56 memory_monitor_summary.json
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas        95 Jan 14 05:56 pilot_heartbeat.json
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas    370449 Jan 14 05:57 log.48215263._015195.job.log.tgz.1
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas      7845 Jan 14 05:57 heartbeat.json
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas      5951 Jan 14 05:57 init_data.xml
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 05:57 boinc_mmap_file
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas        27 Jan 14 05:57 wrapper_checkpoint.txt
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas      4893 Jan 14 05:58 pilotlog.txt
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas   1001896 Jan 14 05:58 log.48215263._015195.job.log.1
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas       357 Jan 14 05:58 output.list
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas       620 Jan 14 05:58 runtime_log
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas   1392640 Jan 14 05:58 result.tar.gz
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas      9342 Jan 14 05:58 runtime_log.err
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas       657 Jan 14 05:58 exjMDmbO8z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDme1jKDm9Rszgn.diag
[2026-01-14 05:58:06] -rw-r--r-- 1 boincer umatlas     20863 Jan 14 05:58 stderr.txt
[2026-01-14 05:58:06] HITS file was successfully produced:
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas 159261043 Jan 14 05:56 shared/HITS.pool.root.1
[2026-01-14 05:58:06]  *** Contents of shared directory: ***
[2026-01-14 05:58:06] total 742580
[2026-01-14 05:58:06] -rw-r--r-- 2 boincer umatlas 599123602 Jan 14 04:00 ATLAS.root_0
[2026-01-14 05:58:06] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 04:00 start_atlas.sh
[2026-01-14 05:58:06] -rw-r--r-- 2 boincer umatlas    592402 Jan 14 04:00 input.tar.gz
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas 159261043 Jan 14 05:56 HITS.pool.root.1
[2026-01-14 05:58:06] -rw------- 1 boincer umatlas   1392640 Jan 14 05:58 result.tar.gz
05:58:08 (27923): run_atlas exited; CPU time 52231.912965
05:58:08 (27923): called boinc_finish(0)

</stderr_txt>
]]>

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