Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:49:44 (27206): wrapper (7.7.26015): starting
03:49:44 (27206): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 03:49:44] Arguments: --nthreads 8
[2026-01-14 03:49:44] Threads: 8
[2026-01-14 03:49:44] Checking for CVMFS
[2026-01-14 03:49:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 03:49:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 03:49:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 03:49:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 03:49:44] 2.11.4.0 31920 52904 73792 155124 0 57 14363295 18432001 934 130560 0 26356419 99.991 1698181 38416 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 03:49:44] CVMFS is ok
[2026-01-14 03:49:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 03:49:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 03:49:44] Further information can be found at the LHC@home message board.
[2026-01-14 03:49:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 03:49:44] Checking for apptainer binary...
[2026-01-14 03:49:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 03:49:44] Running /usr/bin/apptainer --version
[2026-01-14 03:49:44] apptainer version 1.3.2-1.el7
[2026-01-14 03:49:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 03:49:44] c-206-22.aglt2.org
[2026-01-14 03:49:44] apptainer works
[2026-01-14 03:49:45] Set ATHENA_PROC_NUMBER=8
[2026-01-14 03:49:45] Set ATHENA_CORE_NUMBER=8
[2026-01-14 03:49:45] Starting ATLAS job with PandaID=6969344824
[2026-01-14 03:49:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 05:45:11]  *** The last 200 lines of the pilot log: ***
[2026-01-14 05:45:11] 2026-01-14 10:44:01,255 | INFO     | total number of processed events: 400 (read)
[2026-01-14 05:45:11] 2026-01-14 10:44:01,256 | INFO     | executing command: lscpu
[2026-01-14 05:45:11] 2026-01-14 10:44:01,275 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 05:45:11] 2026-01-14 10:44:02,603 | INFO     | time since job start (6848s) is within the limit (349056.0s)
[2026-01-14 05:45:11] 2026-01-14 10:44:02,842 | WARNING  | process 17433 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 05:45:11] 2026-01-14 10:44:02,842 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969344824/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 05:45:11] 2026-01-14 10:44:02,944 | INFO     | number of running child processes to parent process 17433: 1
[2026-01-14 05:45:11] 2026-01-14 10:44:02,945 | INFO     | maximum number of monitored processes: 6
[2026-01-14 05:45:11] 2026-01-14 10:44:04,045 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 05:45:11] 2026-01-14 10:44:04,049 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2045.2916666666667
[2026-01-14 05:45:11] 2026-01-14 10:44:04,051 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969344824/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 05:45:11] 2026-01-14 10:44:04,051 | INFO     | extracted standard info from prmon json
[2026-01-14 05:45:11] 2026-01-14 10:44:04,052 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 05:45:11] 2026-01-14 10:44:04,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 05:45:11] 2026-01-14 10:44:04,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 05:45:11] 2026-01-14 10:44:04,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 05:45:11] 2026-01-14 10:44:04,054 | INFO     | fitting pss+swap vs Time
[2026-01-14 05:45:11] 2026-01-14 10:44:04,054 | INFO     | sum of square deviations: 435610028.0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,055 | INFO     | sum of deviations: 14102997663.0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,055 | INFO     | mean x: 1768384002.5
[2026-01-14 05:45:11] 2026-01-14 10:44:04,055 | INFO     | mean y: 2492613.9285714286
[2026-01-14 05:45:11] 2026-01-14 10:44:04,055 | INFO     | intersect: -57249438818.981606
[2026-01-14 05:45:11] 2026-01-14 10:44:04,055 | INFO     | chi2: 1.6069413193746904
[2026-01-14 05:45:11] 2026-01-14 10:44:04,055 | INFO     | sum of square deviations: 379832238.0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,056 | INFO     | sum of deviations: 13430926686.0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,056 | INFO     | mean x: 1768383850.0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,056 | INFO     | mean y: 2490776.542056075
[2026-01-14 05:45:11] 2026-01-14 10:44:04,056 | INFO     | intersect: -62527835683.15256
[2026-01-14 05:45:11] 2026-01-14 10:44:04,056 | INFO     | chi2: 1.6104036407387536
[2026-01-14 05:45:11] 2026-01-14 10:44:04,057 | INFO     | current chi2=1.6104036407387536 (change=-0.21546034832252048 %)
[2026-01-14 05:45:11] 2026-01-14 10:44:04,057 | INFO     | right removable region: 106
[2026-01-14 05:45:11] 2026-01-14 10:44:04,057 | INFO     | sum of square deviations: 379832238.0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,057 | INFO     | sum of deviations: -3934048722.000001
[2026-01-14 05:45:11] 2026-01-14 10:44:04,057 | INFO     | mean x: 1768384155.0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,058 | INFO     | mean y: 2540963.046728972
[2026-01-14 05:45:11] 2026-01-14 10:44:04,058 | INFO     | intersect: 18318283359.253765
[2026-01-14 05:45:11] 2026-01-14 10:44:04,058 | INFO     | chi2: 0.022072427419692457
[2026-01-14 05:45:11] 2026-01-14 10:44:04,058 | INFO     | current chi2=0.022072427419692457 (change=98.62643226895918 %)
[2026-01-14 05:45:11] 2026-01-14 10:44:04,058 | INFO     | sum of square deviations: 329031285.5
[2026-01-14 05:45:11] 2026-01-14 10:44:04,059 | INFO     | sum of deviations: -3072901748.5
[2026-01-14 05:45:11] 2026-01-14 10:44:04,059 | INFO     | mean x: 1768384307.5
[2026-01-14 05:45:11] 2026-01-14 10:44:04,059 | INFO     | mean y: 2538349.5196078434
[2026-01-14 05:45:11] 2026-01-14 10:44:04,059 | INFO     | intersect: 16517901690.361286
[2026-01-14 05:45:11] 2026-01-14 10:44:04,059 | INFO     | chi2: 0.021343377812184296
[2026-01-14 05:45:11] 2026-01-14 10:44:04,059 | INFO     | current chi2=0.021343377812184296 (change=3.302987902715772 %)
[2026-01-14 05:45:11] 2026-01-14 10:44:04,059 | INFO     | left removable region: 20
[2026-01-14 05:45:11] 2026-01-14 10:44:04,059 | INFO     | sum of square deviations: 197203697.5
[2026-01-14 05:45:11] 2026-01-14 10:44:04,060 | INFO     | sum of deviations: -96223138.49999993
[2026-01-14 05:45:11] 2026-01-14 10:44:04,060 | INFO     | mean x: 1768384429.5
[2026-01-14 05:45:11] 2026-01-14 10:44:04,060 | INFO     | mean y: 2527402.5465116277
[2026-01-14 05:45:11] 2026-01-14 10:44:04,060 | INFO     | intersect: 865389012.3346438
[2026-01-14 05:45:11] 2026-01-14 10:44:04,060 | INFO     | chi2: 0.009576324426215418
[2026-01-14 05:45:11] 2026-01-14 10:44:04,061 | INFO     | current memory leak: -0.49 B/s (using 86 data points, chi2=0.01)
[2026-01-14 05:45:11] 2026-01-14 10:44:04,061 | INFO     | could have reported an average CPU frequency of 2321 MHz (7 samples)
[2026-01-14 05:45:11] 2026-01-14 10:44:04,061 | INFO     | ..............................
[2026-01-14 05:45:11] 2026-01-14 10:44:04,061 | INFO     | . Timing measurements:
[2026-01-14 05:45:11] 2026-01-14 10:44:04,061 | INFO     | . get job = 0 s
[2026-01-14 05:45:11] 2026-01-14 10:44:04,061 | INFO     | . initial setup = 2 s
[2026-01-14 05:45:11] 2026-01-14 10:44:04,061 | INFO     | . payload setup = 4 s
[2026-01-14 05:45:11] 2026-01-14 10:44:04,061 | INFO     | . stage-in = 0 s
[2026-01-14 05:45:11] 2026-01-14 10:44:04,062 | INFO     | . payload execution = 6823 s
[2026-01-14 05:45:11] 2026-01-14 10:44:04,062 | INFO     | . stage-out = 0 s
[2026-01-14 05:45:11] 2026-01-14 10:44:04,062 | INFO     | . log creation = 0 s
[2026-01-14 05:45:11] 2026-01-14 10:44:04,062 | INFO     | ..............................
[2026-01-14 05:45:11] 2026-01-14 10:44:04,138 | INFO     | 
[2026-01-14 05:45:11] 2026-01-14 10:44:04,138 | INFO     | job summary report
[2026-01-14 05:45:11] 2026-01-14 10:44:04,138 | INFO     | --------------------------------------------------
[2026-01-14 05:45:11] 2026-01-14 10:44:04,138 | INFO     | PanDA job id: 6969344824
[2026-01-14 05:45:11] 2026-01-14 10:44:04,138 | INFO     | task id: 48215263
[2026-01-14 05:45:11] 2026-01-14 10:44:04,138 | INFO     | errors: (none)
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | pilot state: finished 
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | transexitcode: 0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | exeerrorcode: 0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | exeerrordiag: 
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | exitcode: 0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | exitmsg: OK
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | cpuconsumptiontime: 51504 s
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | nevents: 400
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | neventsw: 0
[2026-01-14 05:45:11] 2026-01-14 10:44:04,139 | INFO     | pid: 17433
[2026-01-14 05:45:11] 2026-01-14 10:44:04,140 | INFO     | pgrp: 17433
[2026-01-14 05:45:11] 2026-01-14 10:44:04,140 | INFO     | corecount: 8
[2026-01-14 05:45:11] 2026-01-14 10:44:04,140 | INFO     | event service: False
[2026-01-14 05:45:11] 2026-01-14 10:44:04,140 | INFO     | sizes: {0: 2283722, 1: 2283977, 4: 2284239, 12: 2284267, 6831: 2311493, 6832: 2320675, 6835: 2320813}
[2026-01-14 05:45:11] 2026-01-14 10:44:04,140 | INFO     | --------------------------------------------------
[2026-01-14 05:45:11] 2026-01-14 10:44:04,140 | INFO     | 
[2026-01-14 05:45:11] 2026-01-14 10:44:04,140 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-14 05:45:11] 2026-01-14 10:44:04,153 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,153 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,153 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,154 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,155 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,155 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,155 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 05:45:11] 2026-01-14 10:44:04,155 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,155 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 05:45:11] 2026-01-14 10:44:04,155 | INFO     | job 6969344824 has completed (purged errors)
[2026-01-14 05:45:11] 2026-01-14 10:44:04,156 | INFO     | overall cleanup function is called
[2026-01-14 05:45:11] 2026-01-14 10:44:05,163 | INFO     | --- collectZombieJob: --- 10, [17433]
[2026-01-14 05:45:11] 2026-01-14 10:44:05,163 | INFO     | zombie collector waiting for pid 17433
[2026-01-14 05:45:11] 2026-01-14 10:44:05,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 05:45:11] 2026-01-14 10:44:05,163 | INFO     | collected zombie processes
[2026-01-14 05:45:11] 2026-01-14 10:44:05,163 | INFO     | will attempt to kill all subprocesses of pid=17433
[2026-01-14 05:45:11] 2026-01-14 10:44:05,264 | INFO     | process IDs to be killed: [17433] (in reverse order)
[2026-01-14 05:45:11] 2026-01-14 10:44:05,299 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 05:45:11] 2026-01-14 10:44:05,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 05:45:11] 2026-01-14 10:44:05,302 | INFO     | did not find any defunct processes belonging to 17433
[2026-01-14 05:45:11] 2026-01-14 10:44:05,304 | INFO     | did not find any defunct processes belonging to 17433
[2026-01-14 05:45:11] 2026-01-14 10:44:05,304 | INFO     | ready for new job
[2026-01-14 05:45:11] 2026-01-14 10:44:05,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 05:45:11] 2026-01-14 10:44:05,306 | INFO     | ***************************************
[2026-01-14 05:45:11] 2026-01-14 10:44:05,306 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 05:45:11] 2026-01-14 10:44:05,306 | INFO     | ***************************************
[2026-01-14 05:45:11] 2026-01-14 10:44:05,306 | INFO     | 
[2026-01-14 05:45:11] 2026-01-14 10:44:05,307 | INFO     | architecture information:
[2026-01-14 05:45:11] 2026-01-14 10:44:05,307 | INFO     | executing command: cat /etc/os-release
[2026-01-14 05:45:11] 2026-01-14 10:44:05,317 | INFO     | cat /etc/os-release:
[2026-01-14 05:45:11] NAME="CentOS Linux"
[2026-01-14 05:45:11] VERSION="7 (Core)"
[2026-01-14 05:45:11] ID="centos"
[2026-01-14 05:45:11] ID_LIKE="rhel fedora"
[2026-01-14 05:45:11] VERSION_ID="7"
[2026-01-14 05:45:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 05:45:11] ANSI_COLOR="0;31"
[2026-01-14 05:45:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 05:45:11] HOME_URL="https://www.centos.org/"
[2026-01-14 05:45:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 05:45:11] 
[2026-01-14 05:45:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 05:45:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 05:45:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 05:45:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 05:45:11] 
[2026-01-14 05:45:11] 2026-01-14 10:44:05,317 | INFO     | ***************************************
[2026-01-14 05:45:11] 2026-01-14 10:44:05,820 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-14 05:45:11] 2026-01-14 10:44:05,831 | INFO     | sufficient remaining disk space (26121076736 B)
[2026-01-14 05:45:11] 2026-01-14 10:44:05,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 05:45:11] 2026-01-14 10:44:05,831 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 05:45:11] 2026-01-14 10:44:05,831 | INFO     | update_server=False
[2026-01-14 05:45:11] 2026-01-14 10:44:05,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 05:45:11] 2026-01-14 10:44:05,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:45:11] 2026-01-14 10:44:05,886 | INFO     | all data control threads have been joined
[2026-01-14 05:45:11] 2026-01-14 10:44:06,301 | INFO     | job.realtimelogging is not enabled
[2026-01-14 05:45:11] 2026-01-14 10:44:06,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:45:11] 2026-01-14 10:44:06,453 | INFO     | aborting loop
[2026-01-14 05:45:11] 2026-01-14 10:44:06,470 | INFO     | all job control threads have been joined
[2026-01-14 05:45:11] 2026-01-14 10:44:06,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 05:45:11] 2026-01-14 10:44:06,837 | INFO     | [job] retrieve thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:06,837 | INFO     | [job] queue monitor thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:06,892 | INFO     | [data] control thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:07,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 05:45:11] 2026-01-14 10:44:07,278 | INFO     | [payload] validate_post thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:07,287 | INFO     | all payload control threads have been joined
[2026-01-14 05:45:11] 2026-01-14 10:44:07,302 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:07,459 | INFO     | [job] job monitor thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:07,475 | INFO     | [job] control thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:07,598 | INFO     | [payload] failed_post thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:07,662 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:07,700 | INFO     | [job] validate thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:08,121 | INFO     | [data] copytool_in thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:08,139 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:08,283 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:08,292 | INFO     | [payload] control thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:08,693 | INFO     | [data] copytool_out thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:11,266 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 05:45:11] 2026-01-14 10:44:35,819 | INFO     | PID=397 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-14 05:45:11] 2026-01-14 10:44:35,820 | INFO     | .. there are 2 such processes running
[2026-01-14 05:45:11] 2026-01-14 10:44:35,820 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 05:45:11] 2026-01-14 10:44:35,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 05:45:11] 2026-01-14 10:44:35,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 05:45:11] 2026-01-14 10:45:04,850 | INFO     | [monitor] cgroup control has ended
[2026-01-14 05:45:11] 2026-01-14 10:45:06,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623064459072)>', '<ExcThread(monitor, started 139622759765760)>']
[2026-01-14 05:45:11] 2026-01-14 10:45:06,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 05:45:11] 2026-01-14 10:45:06,965 | INFO     | [monitor] control thread has ended
[2026-01-14 05:45:11] 2026-01-14 10:45:11,682 | INFO     | all workflow threads have been joined
[2026-01-14 05:45:11] 2026-01-14 10:45:11,682 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 05:45:11] 2026-01-14 10:45:11,682 | INFO     | traces error code: 0
[2026-01-14 05:45:11] 2026-01-14 10:45:11,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 05:45:11] 2026-01-14 10:45:11,771 [wrapper] ==== pilot stdout END ====
[2026-01-14 05:45:11] 2026-01-14 10:45:11,773 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 05:45:11] 2026-01-14 10:45:11,775 [wrapper] pilotpid: 397
[2026-01-14 05:45:11] 2026-01-14 10:45:11,777 [wrapper] Pilot exit status: 0
[2026-01-14 05:45:11] 2026-01-14 10:45:11,784 [wrapper] pandaids: 6969344824
[2026-01-14 05:45:11] 2026-01-14 10:45:11,811 [wrapper] cleanup supervisor_pilot 24471 398
[2026-01-14 05:45:11] 2026-01-14 10:45:11,813 [wrapper] Test setup, not cleaning
[2026-01-14 05:45:11] 2026-01-14 10:45:11,815 [wrapper] apfmon messages muted
[2026-01-14 05:45:11] 2026-01-14 10:45:11,817 [wrapper] ==== wrapper stdout END ====
[2026-01-14 05:45:11] 2026-01-14 10:45:11,819 [wrapper] ==== wrapper stderr END ====
[2026-01-14 05:45:11]  *** Error codes and diagnostics ***
[2026-01-14 05:45:11]     "exeErrorCode": 0,
[2026-01-14 05:45:11]     "exeErrorDiag": "",
[2026-01-14 05:45:11]     "pilotErrorCode": 0,
[2026-01-14 05:45:11]     "pilotErrorDiag": "",
[2026-01-14 05:45:11]  *** Listing of results directory ***
[2026-01-14 05:45:11] total 735404
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 00:14 pilot3.tar.gz
[2026-01-14 05:45:11] -rwx------ 1 boincer umatlas     36322 Jan 14 00:14 runpilot2-wrapper.sh
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 00:17 queuedata.json
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas       100 Jan 14 03:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 05:45:11] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 03:49 run_atlas
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas       105 Jan 14 03:49 job.xml
[2026-01-14 05:45:11] -rw-r--r-- 2 boincer umatlas 594381248 Jan 14 03:49 EVNT.32794306._000581.pool.root.1
[2026-01-14 05:45:11] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 03:49 start_atlas.sh
[2026-01-14 05:45:11] drwxrwx--x 2 boincer umatlas      4096 Jan 14 03:49 shared
[2026-01-14 05:45:11] -rw-r--r-- 2 boincer umatlas    592396 Jan 14 03:49 input.tar.gz
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas         0 Jan 14 03:49 boinc_lockfile
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas      2507 Jan 14 03:49 pandaJob.out
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas        57 Jan 14 03:49 setup.sh.local
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas    997218 Jan 14 03:49 agis_schedconf.cvmfs.json
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas   1516246 Jan 14 03:49 agis_ddmendpoints.agis.ALL.json
[2026-01-14 05:45:11] drwx------ 5 boincer umatlas      4096 Jan 14 03:49 pilot3
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas      5950 Jan 14 05:39 init_data.xml
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas 152072266 Jan 14 05:43 HITS.48215263._014515.pool.root.1
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas       531 Jan 14 05:43 boinc_task_state.xml
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas      1048 Jan 14 05:43 memory_monitor_summary.json
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas    360544 Jan 14 05:44 log.48215263._014515.job.log.tgz.1
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas      7843 Jan 14 05:44 heartbeat.json
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas        95 Jan 14 05:44 pilot_heartbeat.json
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 05:45 boinc_mmap_file
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas        27 Jan 14 05:45 wrapper_checkpoint.txt
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas      4891 Jan 14 05:45 pilotlog.txt
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas    976436 Jan 14 05:45 log.48215263._014515.job.log.1
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas       357 Jan 14 05:45 output.list
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas       620 Jan 14 05:45 runtime_log
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas   1351680 Jan 14 05:45 result.tar.gz
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas       657 Jan 14 05:45 uMRLDmCO8z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmEqKDm4llrkn.diag
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas      9342 Jan 14 05:45 runtime_log.err
[2026-01-14 05:45:11] -rw-r--r-- 1 boincer umatlas     21297 Jan 14 05:45 stderr.txt
[2026-01-14 05:45:11] HITS file was successfully produced:
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas 152072266 Jan 14 05:43 shared/HITS.pool.root.1
[2026-01-14 05:45:11]  *** Contents of shared directory: ***
[2026-01-14 05:45:11] total 730888
[2026-01-14 05:45:11] -rw-r--r-- 2 boincer umatlas 594381248 Jan 14 03:49 ATLAS.root_0
[2026-01-14 05:45:11] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 03:49 start_atlas.sh
[2026-01-14 05:45:11] -rw-r--r-- 2 boincer umatlas    592396 Jan 14 03:49 input.tar.gz
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas 152072266 Jan 14 05:43 HITS.pool.root.1
[2026-01-14 05:45:11] -rw------- 1 boincer umatlas   1351680 Jan 14 05:45 result.tar.gz
05:45:13 (27206): run_atlas exited; CPU time 51593.843450
05:45:13 (27206): called boinc_finish(0)

</stderr_txt>
]]>

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