Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:08:10 (1258864): wrapper (7.7.26015): starting
11:08:10 (1258864): wrapper: running run_atlas (--nthreads 3)
[2026-01-14 11:08:10] Arguments: --nthreads 3
[2026-01-14 11:08:10] Threads: 3
[2026-01-14 11:08:10] Checking for CVMFS
[2026-01-14 11:08:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 11:08:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 11:08:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 11:08:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 11:08:10] 2.9.2.0 1126407 343 64148 155126 1 56 24184102 36864000 0 130560 0 361574 99.993 13706 19036 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 11:08:10] CVMFS is ok
[2026-01-14 11:08:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 11:08:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 11:08:10] Further information can be found at the LHC@home message board.
[2026-01-14 11:08:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 11:08:10] Checking for apptainer binary...
[2026-01-14 11:08:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 11:08:10] Running /usr/bin/apptainer --version
[2026-01-14 11:08:10] apptainer version 1.4.1-1.1
[2026-01-14 11:08:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 11:08:10] atlasA223
[2026-01-14 11:08:10] apptainer works
[2026-01-14 11:08:10] Set ATHENA_PROC_NUMBER=3
[2026-01-14 11:08:10] Set ATHENA_CORE_NUMBER=3
[2026-01-14 11:08:10] Starting ATLAS job with PandaID=6969273997
[2026-01-14 11:08:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 12:02:28]  *** The last 200 lines of the pilot log: ***
[2026-01-14 12:02:28] 2026-01-14 11:01:57,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 12:02:28] 2026-01-14 11:01:57,987 | INFO     | did not find any defunct processes belonging to 1269026
[2026-01-14 12:02:28] 2026-01-14 11:01:57,988 | INFO     | did not find any defunct processes belonging to 1269026
[2026-01-14 12:02:28] 2026-01-14 11:01:57,988 | INFO     | ready for new job
[2026-01-14 12:02:28] 2026-01-14 11:01:57,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 12:02:28] 2026-01-14 11:01:57,989 | INFO     | ***************************************
[2026-01-14 12:02:28] 2026-01-14 11:01:57,989 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 12:02:28] 2026-01-14 11:01:57,989 | INFO     | ***************************************
[2026-01-14 12:02:28] 2026-01-14 11:01:57,989 | INFO     | 
[2026-01-14 12:02:28] 2026-01-14 11:01:57,989 | INFO     | architecture information:
[2026-01-14 12:02:28] 2026-01-14 11:01:57,989 | INFO     | executing command: cat /etc/os-release
[2026-01-14 12:02:28] 2026-01-14 11:01:57,998 | INFO     | cat /etc/os-release:
[2026-01-14 12:02:28] NAME="CentOS Linux"
[2026-01-14 12:02:28] VERSION="7 (Core)"
[2026-01-14 12:02:28] ID="centos"
[2026-01-14 12:02:28] ID_LIKE="rhel fedora"
[2026-01-14 12:02:28] VERSION_ID="7"
[2026-01-14 12:02:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 12:02:28] ANSI_COLOR="0;31"
[2026-01-14 12:02:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 12:02:28] HOME_URL="https://www.centos.org/"
[2026-01-14 12:02:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 12:02:28] 
[2026-01-14 12:02:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 12:02:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 12:02:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 12:02:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 12:02:28] 
[2026-01-14 12:02:28] 2026-01-14 11:01:57,998 | INFO     | ***************************************
[2026-01-14 12:02:28] 2026-01-14 11:01:58,501 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-14 12:02:28] 2026-01-14 11:01:58,514 | INFO     | sufficient remaining disk space (379873918976 B)
[2026-01-14 12:02:28] 2026-01-14 11:01:58,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 12:02:28] 2026-01-14 11:01:58,514 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 12:02:28] 2026-01-14 11:01:58,514 | INFO     | update_server=False
[2026-01-14 12:02:28] 2026-01-14 11:01:58,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 12:02:28] 2026-01-14 11:01:58,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 12:02:28] 2026-01-14 11:01:58,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 12:02:28] 2026-01-14 11:01:58,514 | INFO     | aborting loop
[2026-01-14 12:02:28] 2026-01-14 11:01:59,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 12:02:28] 2026-01-14 11:01:59,166 | INFO     | all data control threads have been joined
[2026-01-14 12:02:28] 2026-01-14 11:01:59,203 | INFO     | all payload control threads have been joined
[2026-01-14 12:02:28] 2026-01-14 11:01:59,520 | INFO     | [job] retrieve thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:01:59,520 | INFO     | [job] queue monitor thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:01:59,520 | INFO     | [job] job monitor thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:01:59,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 12:02:28] 2026-01-14 11:01:59,612 | INFO     | [data] copytool_in thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:01:59,636 | INFO     | all job control threads have been joined
[2026-01-14 12:02:28] 2026-01-14 11:01:59,715 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:00,125 | INFO     | [job] validate thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:00,172 | INFO     | [data] control thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:00,208 | INFO     | [payload] control thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:00,211 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:00,241 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:00,244 | INFO     | [payload] validate_post thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:00,370 | INFO     | [payload] failed_post thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:00,641 | INFO     | [job] control thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:01,530 | INFO     | [data] copytool_out thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:03,162 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:08,849 | INFO     | job.realtimelogging is not enabled
[2026-01-14 12:02:28] 2026-01-14 11:02:09,855 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 12:02:28] 2026-01-14 11:02:20,050 | INFO     | [monitor] cgroup control has ended
[2026-01-14 12:02:28] 2026-01-14 11:02:22,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273569859392)>', '<ExcThread(monitor, started 140273069836032)>']
[2026-01-14 12:02:28] 2026-01-14 11:02:27,039 | INFO     | all workflow threads have been joined
[2026-01-14 12:02:28] 2026-01-14 11:02:27,040 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 12:02:28] 2026-01-14 11:02:27,040 | INFO     | traces error code: 0
[2026-01-14 12:02:28] 2026-01-14 11:02:27,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 12:02:28] 2026-01-14 11:02:28,836 | INFO     | PID=1262584 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 12:02:28] 2026-01-14 11:02:28,836 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 12:02:28] 2026-01-14 11:02:28,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 12:02:28] 2026-01-14 11:02:28,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 12:02:28] 2026-01-14 11:02:28,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 12:02:28] 2026-01-14 11:02:28,837 | INFO     | [monitor] control thread has ended
[2026-01-14 12:02:28] 2026-01-14 11:02:28,883 [wrapper] ==== pilot stdout END ====
[2026-01-14 12:02:28] 2026-01-14 11:02:28,885 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 12:02:28] 2026-01-14 11:02:28,888 [wrapper] pilotpid: 1262584
[2026-01-14 12:02:28] 2026-01-14 11:02:28,890 [wrapper] Pilot exit status: 0
[2026-01-14 12:02:28] 2026-01-14 11:02:28,897 [wrapper] pandaids: 6969273997
[2026-01-14 12:02:28] 2026-01-14 11:02:28,914 [wrapper] cleanup supervisor_pilot 1278312 1262585
[2026-01-14 12:02:28] 2026-01-14 11:02:28,916 [wrapper] Test setup, not cleaning
[2026-01-14 12:02:28] 2026-01-14 11:02:28,919 [wrapper] apfmon messages muted
[2026-01-14 12:02:28] 2026-01-14 11:02:28,921 [wrapper] ==== wrapper stdout END ====
[2026-01-14 12:02:28] 2026-01-14 11:02:28,923 [wrapper] ==== wrapper stderr END ====
[2026-01-14 12:02:28]  *** Error codes and diagnostics ***
[2026-01-14 12:02:28]     "exeErrorCode": 0,
[2026-01-14 12:02:28]     "exeErrorDiag": "",
[2026-01-14 12:02:28]     "pilotErrorCode": 0,
[2026-01-14 12:02:28]     "pilotErrorDiag": "",
[2026-01-14 12:02:28]  *** Listing of results directory ***
[2026-01-14 12:02:28] total 727144
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc    579449 Jan 14 00:46 pilot3.tar.gz
[2026-01-14 12:02:28] -rwx------ 1 boinc boinc     36322 Jan 14 00:50 runpilot2-wrapper.sh
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc      5112 Jan 14 00:54 queuedata.json
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc       100 Jan 14 11:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 12:02:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 11:08 run_atlas
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc       105 Jan 14 11:08 job.xml
[2026-01-14 12:02:28] -rw-r--r-- 2 boinc boinc 592974195 Jan 14 11:08 EVNT.32794306._000330.pool.root.1
[2026-01-14 12:02:28] -rw-r--r-- 2 boinc boinc    592397 Jan 14 11:08 input.tar.gz
[2026-01-14 12:02:28] -rw-r--r-- 2 boinc boinc     15847 Jan 14 11:08 start_atlas.sh
[2026-01-14 12:02:28] drwxrwx--x 2 boinc boinc      4096 Jan 14 11:08 shared
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc         0 Jan 14 11:08 boinc_setup_complete
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc      6446 Jan 14 11:08 init_data.xml
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc         0 Jan 14 11:08 boinc_lockfile
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc      2505 Jan 14 11:08 pandaJob.out
[2026-01-14 12:02:28] -rw------- 1 boinc boinc    997218 Jan 14 11:08 agis_schedconf.cvmfs.json
[2026-01-14 12:02:28] -rw------- 1 boinc boinc   1516246 Jan 14 11:08 agis_ddmendpoints.agis.ALL.json
[2026-01-14 12:02:28] drwx------ 5 boinc boinc      4096 Jan 14 11:08 pilot3
[2026-01-14 12:02:28] -rw------- 1 boinc boinc        95 Jan 14 12:01 pilot_heartbeat.json
[2026-01-14 12:02:28] -rw------- 1 boinc boinc 146289856 Jan 14 12:01 HITS.48215263._008229.pool.root.1
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc       529 Jan 14 12:01 boinc_task_state.xml
[2026-01-14 12:02:28] -rw------- 1 boinc boinc      1017 Jan 14 12:01 memory_monitor_summary.json
[2026-01-14 12:02:28] -rw------- 1 boinc boinc    217852 Jan 14 12:01 log.48215263._008229.job.log.tgz.1
[2026-01-14 12:02:28] -rw------- 1 boinc boinc      7740 Jan 14 12:01 heartbeat.json
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc      8192 Jan 14 12:02 boinc_mmap_file
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc        26 Jan 14 12:02 wrapper_checkpoint.txt
[2026-01-14 12:02:28] -rw------- 1 boinc boinc       747 Jan 14 12:02 pilotlog.txt
[2026-01-14 12:02:28] -rw------- 1 boinc boinc    491958 Jan 14 12:02 log.48215263._008229.job.log.1
[2026-01-14 12:02:28] -rw------- 1 boinc boinc       357 Jan 14 12:02 output.list
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc       620 Jan 14 12:02 runtime_log
[2026-01-14 12:02:28] -rw------- 1 boinc boinc    727040 Jan 14 12:02 result.tar.gz
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc      8912 Jan 14 12:02 runtime_log.err
[2026-01-14 12:02:28] -rw------- 1 boinc boinc       659 Jan 14 12:02 EZKODmqK3z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRGjKDmzpZ1vm.diag
[2026-01-14 12:02:28] -rw-r--r-- 1 boinc boinc      9957 Jan 14 12:02 stderr.txt
[2026-01-14 12:02:28] HITS file was successfully produced:
[2026-01-14 12:02:28] -rw------- 1 boinc boinc 146289856 Jan 14 12:01 shared/HITS.pool.root.1
[2026-01-14 12:02:28]  *** Contents of shared directory: ***
[2026-01-14 12:02:28] total 723260
[2026-01-14 12:02:28] -rw-r--r-- 2 boinc boinc 592974195 Jan 14 11:08 ATLAS.root_0
[2026-01-14 12:02:28] -rw-r--r-- 2 boinc boinc    592397 Jan 14 11:08 input.tar.gz
[2026-01-14 12:02:28] -rw-r--r-- 2 boinc boinc     15847 Jan 14 11:08 start_atlas.sh
[2026-01-14 12:02:28] -rw------- 1 boinc boinc 146289856 Jan 14 12:01 HITS.pool.root.1
[2026-01-14 12:02:28] -rw------- 1 boinc boinc    727040 Jan 14 12:02 result.tar.gz
12:02:30 (1258864): run_atlas exited; CPU time 8997.204283
12:02:30 (1258864): called boinc_finish(0)

</stderr_txt>
]]>

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