Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:29:14 (13800): wrapper (7.7.26015): starting
11:29:14 (13800): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 11:29:14] Arguments: --nthreads 8
[2026-01-14 11:29:14] Threads: 8
[2026-01-14 11:29:14] Checking for CVMFS
[2026-01-14 11:29:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 11:29:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 11:29:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 11:29:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 11:29:15] 2.11.2.0 31778 10753 105300 155128 3 400 22531751 25165825 3771 130560 0 5666218 99.789 1945513 924 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 11:29:15] CVMFS is ok
[2026-01-14 11:29:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 11:29:15] Checking for apptainer binary...
[2026-01-14 11:29:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 11:29:15] Running /usr/bin/apptainer --version
[2026-01-14 11:29:15] apptainer version 1.3.2-1.el7
[2026-01-14 11:29:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 11:29:16] cg-vwn373.simple-grid.lan
[2026-01-14 11:29:16] apptainer works
[2026-01-14 11:29:16] Set ATHENA_PROC_NUMBER=8
[2026-01-14 11:29:16] Set ATHENA_CORE_NUMBER=8
[2026-01-14 11:29:16] Starting ATLAS job with PandaID=6969272962
[2026-01-14 11:29:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 13:51:22]  *** The last 200 lines of the pilot log: ***
[2026-01-14 13:51:22] 2026-01-14 12:50:25,059 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 13:51:22] 2026-01-14 12:50:25,060 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-14 13:51:22] 2026-01-14 12:50:25,062 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6969272962/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 13:51:22] 2026-01-14 12:50:25,063 | INFO     | extracted standard info from prmon json
[2026-01-14 13:51:22] 2026-01-14 12:50:25,063 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 13:51:22] 2026-01-14 12:50:25,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 13:51:22] 2026-01-14 12:50:25,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 13:51:22] 2026-01-14 12:50:25,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 13:51:22] 2026-01-14 12:50:25,066 | INFO     | fitting pss+swap vs Time
[2026-01-14 13:51:22] 2026-01-14 12:50:25,067 | INFO     | sum of square deviations: 729472282.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,068 | INFO     | sum of deviations: 23290897390.00001
[2026-01-14 13:51:22] 2026-01-14 12:50:25,068 | INFO     | mean x: 1768390936.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,068 | INFO     | mean y: 2500747.187969925
[2026-01-14 13:51:22] 2026-01-14 12:50:25,068 | INFO     | intersect: -56459427762.087555
[2026-01-14 13:51:22] 2026-01-14 12:50:25,069 | INFO     | chi2: 3.683840068662173
[2026-01-14 13:51:22] 2026-01-14 12:50:25,069 | INFO     | sum of square deviations: 650252192.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,070 | INFO     | sum of deviations: 22404573947.5
[2026-01-14 13:51:22] 2026-01-14 12:50:25,070 | INFO     | mean x: 1768390783.5
[2026-01-14 13:51:22] 2026-01-14 12:50:25,070 | INFO     | mean y: 2499040.4453125
[2026-01-14 13:51:22] 2026-01-14 12:50:25,070 | INFO     | intersect: -60927771652.13424
[2026-01-14 13:51:22] 2026-01-14 12:50:25,070 | INFO     | chi2: 3.6946982483599244
[2026-01-14 13:51:22] 2026-01-14 12:50:25,071 | INFO     | current chi2=3.6946982483599244 (change=-0.2947516584696596 %)
[2026-01-14 13:51:22] 2026-01-14 12:50:25,071 | INFO     | right removable region: 127
[2026-01-14 13:51:22] 2026-01-14 12:50:25,071 | INFO     | sum of square deviations: 650252192.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,072 | INFO     | sum of deviations: -13911783708.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,072 | INFO     | mean x: 1768391088.5
[2026-01-14 13:51:22] 2026-01-14 12:50:25,072 | INFO     | mean y: 2571812.71875
[2026-01-14 13:51:22] 2026-01-14 12:50:25,072 | INFO     | intersect: 37836314838.94247
[2026-01-14 13:51:22] 2026-01-14 12:50:25,073 | INFO     | chi2: 0.1956683612384375
[2026-01-14 13:51:22] 2026-01-14 12:50:25,073 | INFO     | current chi2=0.1956683612384375 (change=94.6884675341105 %)
[2026-01-14 13:51:22] 2026-01-14 12:50:25,073 | INFO     | sum of square deviations: 576985702.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,074 | INFO     | sum of deviations: -17116142622.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,074 | INFO     | mean x: 1768391241.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,074 | INFO     | mean y: 2578334.3821138213
[2026-01-14 13:51:22] 2026-01-14 12:50:25,074 | INFO     | intersect: 52461480847.10256
[2026-01-14 13:51:22] 2026-01-14 12:50:25,074 | INFO     | chi2: 0.12336842457677583
[2026-01-14 13:51:22] 2026-01-14 12:50:25,075 | INFO     | current chi2=0.12336842457677583 (change=36.95024387389765 %)
[2026-01-14 13:51:22] 2026-01-14 12:50:25,075 | INFO     | sum of square deviations: 509440249.5
[2026-01-14 13:51:22] 2026-01-14 12:50:25,076 | INFO     | sum of deviations: -13633676808.500004
[2026-01-14 13:51:22] 2026-01-14 12:50:25,076 | INFO     | mean x: 1768391393.5
[2026-01-14 13:51:22] 2026-01-14 12:50:25,076 | INFO     | mean y: 2570448.838983051
[2026-01-14 13:51:22] 2026-01-14 12:50:25,076 | INFO     | intersect: 47328388841.82003
[2026-01-14 13:51:22] 2026-01-14 12:50:25,076 | INFO     | chi2: 0.11807224675928095
[2026-01-14 13:51:22] 2026-01-14 12:50:25,077 | INFO     | current chi2=0.11807224675928095 (change=4.292976777213288 %)
[2026-01-14 13:51:22] 2026-01-14 12:50:25,077 | INFO     | left removable region: 30
[2026-01-14 13:51:22] 2026-01-14 12:50:25,077 | INFO     | sum of square deviations: 282974608.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,077 | INFO     | sum of deviations: -1300785533.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,078 | INFO     | mean x: 1768391668.0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,078 | INFO     | mean y: 2536260.7731958763
[2026-01-14 13:51:22] 2026-01-14 12:50:25,078 | INFO     | intersect: 8131528168.1041155
[2026-01-14 13:51:22] 2026-01-14 12:50:25,078 | INFO     | chi2: 0.03805557973946363
[2026-01-14 13:51:22] 2026-01-14 12:50:25,078 | INFO     | current memory leak: -4.60 B/s (using 97 data points, chi2=0.04)
[2026-01-14 13:51:22] 2026-01-14 12:50:25,079 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-14 13:51:22] 2026-01-14 12:50:25,079 | INFO     | ..............................
[2026-01-14 13:51:22] 2026-01-14 12:50:25,079 | INFO     | . Timing measurements:
[2026-01-14 13:51:22] 2026-01-14 12:50:25,079 | INFO     | . get job = 0 s
[2026-01-14 13:51:22] 2026-01-14 12:50:25,079 | INFO     | . initial setup = 4 s
[2026-01-14 13:51:22] 2026-01-14 12:50:25,080 | INFO     | . payload setup = 86 s
[2026-01-14 13:51:22] 2026-01-14 12:50:25,080 | INFO     | . stage-in = 0 s
[2026-01-14 13:51:22] 2026-01-14 12:50:25,080 | INFO     | . payload execution = 8248 s
[2026-01-14 13:51:22] 2026-01-14 12:50:25,080 | INFO     | . stage-out = 1 s
[2026-01-14 13:51:22] 2026-01-14 12:50:25,080 | INFO     | . log creation = 0 s
[2026-01-14 13:51:22] 2026-01-14 12:50:25,080 | INFO     | ..............................
[2026-01-14 13:51:22] 2026-01-14 12:50:25,424 | INFO     | 
[2026-01-14 13:51:22] 2026-01-14 12:50:25,425 | INFO     | job summary report
[2026-01-14 13:51:22] 2026-01-14 12:50:25,425 | INFO     | --------------------------------------------------
[2026-01-14 13:51:22] 2026-01-14 12:50:25,425 | INFO     | PanDA job id: 6969272962
[2026-01-14 13:51:22] 2026-01-14 12:50:25,425 | INFO     | task id: 48215263
[2026-01-14 13:51:22] 2026-01-14 12:50:25,425 | INFO     | errors: (none)
[2026-01-14 13:51:22] 2026-01-14 12:50:25,425 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 13:51:22] 2026-01-14 12:50:25,426 | INFO     | pilot state: finished 
[2026-01-14 13:51:22] 2026-01-14 12:50:25,426 | INFO     | transexitcode: 0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,426 | INFO     | exeerrorcode: 0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,426 | INFO     | exeerrordiag: 
[2026-01-14 13:51:22] 2026-01-14 12:50:25,426 | INFO     | exitcode: 0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,426 | INFO     | exitmsg: OK
[2026-01-14 13:51:22] 2026-01-14 12:50:25,426 | INFO     | cpuconsumptiontime: 34987 s
[2026-01-14 13:51:22] 2026-01-14 12:50:25,426 | INFO     | nevents: 400
[2026-01-14 13:51:22] 2026-01-14 12:50:25,426 | INFO     | neventsw: 0
[2026-01-14 13:51:22] 2026-01-14 12:50:25,427 | INFO     | pid: 32155
[2026-01-14 13:51:22] 2026-01-14 12:50:25,427 | INFO     | pgrp: 32155
[2026-01-14 13:51:22] 2026-01-14 12:50:25,427 | INFO     | corecount: 8
[2026-01-14 13:51:22] 2026-01-14 12:50:25,427 | INFO     | event service: False
[2026-01-14 13:51:22] 2026-01-14 12:50:25,427 | INFO     | sizes: {0: 2283117, 1: 2283974, 2: 2283974, 13: 2284002, 23: 2284058, 25: 2284348, 34: 2284504, 8338: 2312151, 8340: 2321151, 8343: 2321207, 8354: 2321401}
[2026-01-14 13:51:22] 2026-01-14 12:50:25,427 | INFO     | --------------------------------------------------
[2026-01-14 13:51:22] 2026-01-14 12:50:25,427 | INFO     | 
[2026-01-14 13:51:22] 2026-01-14 12:50:25,428 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-14 13:51:22] 2026-01-14 12:50:25,471 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,472 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,472 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,472 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,474 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 13:51:22] 2026-01-14 12:50:25,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,474 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 13:51:22] 2026-01-14 12:50:25,474 | INFO     | job 6969272962 has completed (purged errors)
[2026-01-14 13:51:22] 2026-01-14 12:50:25,474 | INFO     | overall cleanup function is called
[2026-01-14 13:51:22] 2026-01-14 12:50:26,482 | INFO     | --- collectZombieJob: --- 10, [32155]
[2026-01-14 13:51:22] 2026-01-14 12:50:26,482 | INFO     | zombie collector waiting for pid 32155
[2026-01-14 13:51:22] 2026-01-14 12:50:26,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 13:51:22] 2026-01-14 12:50:26,483 | INFO     | collected zombie processes
[2026-01-14 13:51:22] 2026-01-14 12:50:26,483 | INFO     | will attempt to kill all subprocesses of pid=32155
[2026-01-14 13:51:22] 2026-01-14 12:50:26,592 | INFO     | process IDs to be killed: [32155] (in reverse order)
[2026-01-14 13:51:22] 2026-01-14 12:50:26,670 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 13:51:22] 2026-01-14 12:50:26,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 13:51:22] 2026-01-14 12:50:26,675 | INFO     | did not find any defunct processes belonging to 32155
[2026-01-14 13:51:22] 2026-01-14 12:50:26,678 | INFO     | did not find any defunct processes belonging to 32155
[2026-01-14 13:51:22] 2026-01-14 12:50:26,678 | INFO     | ready for new job
[2026-01-14 13:51:22] 2026-01-14 12:50:26,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 13:51:22] 2026-01-14 12:50:26,680 | INFO     | ***************************************
[2026-01-14 13:51:22] 2026-01-14 12:50:26,681 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 13:51:22] 2026-01-14 12:50:26,681 | INFO     | ***************************************
[2026-01-14 13:51:22] 2026-01-14 12:50:26,681 | INFO     | 
[2026-01-14 13:51:22] 2026-01-14 12:50:26,681 | INFO     | pilot is running in a VM
[2026-01-14 13:51:22] 2026-01-14 12:50:26,682 | INFO     | architecture information:
[2026-01-14 13:51:22] 2026-01-14 12:50:26,682 | INFO     | executing command: cat /etc/os-release
[2026-01-14 13:51:22] 2026-01-14 12:50:26,711 | INFO     | cat /etc/os-release:
[2026-01-14 13:51:22] NAME="CentOS Linux"
[2026-01-14 13:51:22] VERSION="7 (Core)"
[2026-01-14 13:51:22] ID="centos"
[2026-01-14 13:51:22] ID_LIKE="rhel fedora"
[2026-01-14 13:51:22] VERSION_ID="7"
[2026-01-14 13:51:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 13:51:22] ANSI_COLOR="0;31"
[2026-01-14 13:51:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 13:51:22] HOME_URL="https://www.centos.org/"
[2026-01-14 13:51:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 13:51:22] 
[2026-01-14 13:51:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 13:51:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 13:51:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 13:51:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 13:51:22] 
[2026-01-14 13:51:22] 2026-01-14 12:50:26,712 | INFO     | ***************************************
[2026-01-14 13:51:22] 2026-01-14 12:50:27,215 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-14 13:51:22] 2026-01-14 12:50:27,239 | INFO     | sufficient remaining disk space (490858348544 B)
[2026-01-14 13:51:22] 2026-01-14 12:50:27,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 13:51:22] 2026-01-14 12:50:27,240 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 13:51:22] 2026-01-14 12:50:27,240 | INFO     | update_server=False
[2026-01-14 13:51:22] 2026-01-14 12:50:27,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 13:51:22] 2026-01-14 12:50:27,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 13:51:22] 2026-01-14 12:50:27,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 13:51:22] 2026-01-14 12:50:27,373 | INFO     | aborting loop
[2026-01-14 13:51:22] 2026-01-14 12:50:27,954 | INFO     | all payload control threads have been joined
[2026-01-14 13:51:22] 2026-01-14 12:50:28,059 | INFO     | all data control threads have been joined
[2026-01-14 13:51:22] 2026-01-14 12:50:28,246 | INFO     | [job] retrieve thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:28,258 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:28,378 | INFO     | [job] job monitor thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:28,470 | INFO     | [payload] failed_post thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:28,503 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:28,741 | INFO     | all job control threads have been joined
[2026-01-14 13:51:22] 2026-01-14 12:50:28,924 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:28,938 | INFO     | [job] validate thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:28,961 | INFO     | [payload] control thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:29,065 | INFO     | [data] control thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:29,247 | INFO     | [data] copytool_out thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:29,647 | INFO     | [data] copytool_in thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:29,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 13:51:22] 2026-01-14 12:50:29,747 | INFO     | [job] control thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:29,831 | INFO     | [payload] validate_post thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:30,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 13:51:22] 2026-01-14 12:50:31,218 | INFO     | [job] queue monitor thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:33,727 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:37,619 | INFO     | job.realtimelogging is not enabled
[2026-01-14 13:51:22] 2026-01-14 12:50:38,625 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 13:51:22] 2026-01-14 12:50:58,006 | INFO     | PID=18118 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 13:51:22] 2026-01-14 12:50:58,007 | INFO     | .. there are 9 such processes running
[2026-01-14 13:51:22] 2026-01-14 12:50:58,007 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 13:51:22] 2026-01-14 12:50:58,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 13:51:22] 2026-01-14 12:50:58,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 13:51:22] 2026-01-14 12:51:15,028 | INFO     | [monitor] cgroup control has ended
[2026-01-14 13:51:22] 2026-01-14 12:51:17,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595459254080)>', '<ExcThread(monitor, started 140594873624320)>']
[2026-01-14 13:51:22] 2026-01-14 12:51:17,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 13:51:22] 2026-01-14 12:51:17,119 | INFO     | [monitor] control thread has ended
[2026-01-14 13:51:22] 2026-01-14 12:51:22,068 | INFO     | all workflow threads have been joined
[2026-01-14 13:51:22] 2026-01-14 12:51:22,069 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 13:51:22] 2026-01-14 12:51:22,069 | INFO     | traces error code: 0
[2026-01-14 13:51:22] 2026-01-14 12:51:22,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 13:51:22] 2026-01-14 12:51:22,250 [wrapper] ==== pilot stdout END ====
[2026-01-14 13:51:22] 2026-01-14 12:51:22,259 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 13:51:22] 2026-01-14 12:51:22,270 [wrapper] pilotpid: 18118
[2026-01-14 13:51:22] 2026-01-14 12:51:22,281 [wrapper] Pilot exit status: 0
[2026-01-14 13:51:22] 2026-01-14 12:51:22,331 [wrapper] pandaids: 6969272962
[2026-01-14 13:51:22] 2026-01-14 12:51:22,390 [wrapper] cleanup supervisor_pilot 20591 18119
[2026-01-14 13:51:22] 2026-01-14 12:51:22,411 [wrapper] Test setup, not cleaning
[2026-01-14 13:51:22] 2026-01-14 12:51:22,429 [wrapper] apfmon messages muted
[2026-01-14 13:51:22] 2026-01-14 12:51:22,437 [wrapper] ==== wrapper stdout END ====
[2026-01-14 13:51:22] 2026-01-14 12:51:22,453 [wrapper] ==== wrapper stderr END ====
[2026-01-14 13:51:22]  *** Error codes and diagnostics ***
[2026-01-14 13:51:22]     "exeErrorCode": 0,
[2026-01-14 13:51:22]     "exeErrorDiag": "",
[2026-01-14 13:51:22]     "pilotErrorCode": 0,
[2026-01-14 13:51:22]     "pilotErrorDiag": "",
[2026-01-14 13:51:22]  *** Listing of results directory ***
[2026-01-14 13:51:22] total 738080
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc    579449 Jan 14 00:46 pilot3.tar.gz
[2026-01-14 13:51:22] -rwx------. 1 boinc boinc     36322 Jan 14 00:50 runpilot2-wrapper.sh
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc      5112 Jan 14 00:53 queuedata.json
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc       100 Jan 14 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 13:51:22] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 11:29 run_atlas
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc       105 Jan 14 11:29 job.xml
[2026-01-14 13:51:22] -rw-r--r--. 2 boinc boinc 600159492 Jan 14 11:29 EVNT.32794306._000293.pool.root.1
[2026-01-14 13:51:22] -rw-r--r--. 2 boinc boinc     15847 Jan 14 11:29 start_atlas.sh
[2026-01-14 13:51:22] drwxrwx--x. 2 boinc boinc        68 Jan 14 11:29 shared
[2026-01-14 13:51:22] -rw-r--r--. 2 boinc boinc    592394 Jan 14 11:29 input.tar.gz
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc      6392 Jan 14 11:29 init_data.xml
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc         0 Jan 14 11:29 boinc_lockfile
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc      2505 Jan 14 11:29 pandaJob.out
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc    997226 Jan 14 11:29 agis_schedconf.cvmfs.json
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc   1516246 Jan 14 11:29 agis_ddmendpoints.agis.ALL.json
[2026-01-14 13:51:22] drwx------. 5 boinc boinc      4096 Jan 14 11:30 pilot3
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc 148666599 Jan 14 13:49 HITS.48215263._007308.pool.root.1
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc       530 Jan 14 13:49 boinc_task_state.xml
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc        95 Jan 14 13:50 pilot_heartbeat.json
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc      1018 Jan 14 13:50 memory_monitor_summary.json
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc    371303 Jan 14 13:50 log.48215263._007308.job.log.tgz.1
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc      7776 Jan 14 13:50 heartbeat.json
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc      8192 Jan 14 13:51 boinc_mmap_file
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc        27 Jan 14 13:51 wrapper_checkpoint.txt
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc      4957 Jan 14 13:51 pilotlog.txt
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc   1160250 Jan 14 13:51 log.48215263._007308.job.log.1
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc       357 Jan 14 13:51 output.list
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc       620 Jan 14 13:51 runtime_log
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc   1546240 Jan 14 13:51 result.tar.gz
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc      8832 Jan 14 13:51 runtime_log.err
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc       652 Jan 14 13:51 eMJODmRK3z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqBjKDm8E0Hbm.diag
[2026-01-14 13:51:22] -rw-r--r--. 1 boinc boinc     20721 Jan 14 13:51 stderr.txt
[2026-01-14 13:51:22] HITS file was successfully produced:
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc 148666599 Jan 14 13:49 shared/HITS.pool.root.1
[2026-01-14 13:51:22]  *** Contents of shared directory: ***
[2026-01-14 13:51:22] total 733388
[2026-01-14 13:51:22] -rw-r--r--. 2 boinc boinc 600159492 Jan 14 11:29 ATLAS.root_0
[2026-01-14 13:51:22] -rw-r--r--. 2 boinc boinc     15847 Jan 14 11:29 start_atlas.sh
[2026-01-14 13:51:22] -rw-r--r--. 2 boinc boinc    592394 Jan 14 11:29 input.tar.gz
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc 148666599 Jan 14 13:49 HITS.pool.root.1
[2026-01-14 13:51:22] -rw-------. 1 boinc boinc   1546240 Jan 14 13:51 result.tar.gz
13:51:24 (13800): run_atlas exited; CPU time 35099.867851
13:51:24 (13800): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN